Lsi04G003300 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACCCCACCTACATACGACCTTTGTTCAAAGTTAAATAATTATCGATGTTGACTTTTTCTTGATGTTCAGGTGAGTTCATTGTTCATGTTATAAACTCACCTCTGGAAAAAGTCAAATTCCCATGTCGAATTTATTAATACAAAGGCAAATCAATTCTAGGGCAAGTTTGTAAATCTATAATAATATTTTAGGTCCCAGGAGTGGCTAGGTGAAAGATCAAAGGTGAGAACAAAACTTATATTATCTAGAGTGGTTTCAGCAGCAGAAATCATTAGTCTTCCTTTGAAGAAAATGGCTTCTTTCTCTGTGGAGGAATTTGTGGGAAATGGGGTTCTTAAGGATCTGCTTCCCACTTTGCTGGATGAAGGCTGGGATGATGTACCAACCTTGAAGGTCATGAATTCCGAGGATATGAATGCAATAAATATGACACGACAACAGAAGGTTGGTAATCAGTACTTTTTCTAGTTTTAACACAGAAACACATCCCAATAAGCAATTTCAGATGTTTATATCTTACATGATTTTTGAAGTAGAAACCTTCGTAATTCATCCAATTGATGAATTTACATAGCTAATAAAAAATCTTTTGAACAGTACTCATAGACGGCTTTTGCTATGACAGGAAGCAATTGAGATAAGAACTTACCTGCATGACAGATCTCTGATGCAGTATGCAGACAGGCTAGAGTCCTCGGAGAAATGTTTGCCTGAACTTCTAAGCTTAAGCGTTGAGGATTTAACGTCTCAATTCCGTATGAAGAGAGGTCATATTGCACGTTTCCATGATAGAATTAGTTCGTGTGAGGATCCCTTGAACAAAAAGTTTGATGCCCCTTCCCCATCTACAAGTGTCAAGAGGACTTATCAGTCTAACAACTCAAAGAGGATGCAGAGTATGAGAAGCCGAACCTCTCAGGATAAAACAGTTGAGCAAGCACTGAGCGAGTTTAAAATCGAAGACGGGTATGTGTTCAAGGGGATTGTTGCAACCGAACTAGCTGGTCACAGAGCATGTGGTTGTGCGCAACCTCCTCATATTGTTGATAAAGTTGCTCCTTATTCTGCCGTTGAAAACATCTCCATTCAGAAATTAACTCCAGAGTATAAGATTGGAATGGAGCGTTTGGTGAAGACTAAGACTCCCCCTATGAAAGCATCAACACTATGGCAGGATAAGCCAGCCATTATCCTCTGTATTAGACGTCCTGGGTAAGTTTAAGCACGTTGCGTCAAGACCTGGTTTTCAGTTGTAGACAGATAAGTTATTCACAAAGAAGATGGTTTAAACTTGACCCATAAACTTTACGGGACAACCCGCCTGACCCTACAACATTTGGGTGTCAAGGAAACTCGTAGGAAATTTATTTCTAGGTAGGTGGCCACCATGGATTGAACTCATGACTTCTTAGCCATATATTGAGATTTTGTCTCCTCTTTTACCACTAGGTCAACCCATGATGGTTAACTTAACGCATAAACTTAAAAAGCACAAACGAAAAAAAAAAACTTCCTAGTTCCCATAGACGCATTTCATATCACTTTTCGATCTTGTTATTGGTGTTTGAGCCATCTTGAGGGAAAGGGACAACTAACATCTCTTGAGTTTGAAAACAGGTGCATCATGTGCAGAGCAGAAGCTCACCAGCTATATGCCAGAAAACCGATATTTGATGCATTAGGATACCAACTATTCGCTGTAATTCATGAACACATAGAATCAGAGGTATTCATAAGACTTCTAGGTCCTTCAATCCATCCAATCTGTTTGACTGAATTGTGGTGATGCAGGTGAAGGACTTCTGGCCCCGGTACTGGGGAGGCGCTGTAATCTTTGACCAAGGCAGAGGATTCTTCAAAGCTCTAGGTGGTGGTAAATTAATGAAGGAAAAATTCCTATTCGGATTTCTTTTCAACCCTCGGGCCATAGCAAATTATAAGCGTGCAAAAGCAATGGGAGTGAAGCAAAACTTCAATGGAGAAGGAGAAATTAAGGGTGGTCTGTTCATTCTTGGCTCAGCTAAGCGTGGTATTGCTTACCAGTTTATTGAGCGGAACTTCGGGGACTGGGCGCCTCTTTCTGAAGTAATTGAGATCTGTACAAAAATACAGGTAACAGTTGCCATGGCCCCTATCCTTATCTCCAGTATTAAGATCGTATTTTAATTATGCAGTCTTTCACGTGATACAGAGCCAGCCACAAGCTCCAGGGGTATCCATCAAACCATCCCAAAAAGATAACCGAAGTTCGTCCCTAGAGTAATACAAATTCTCTGGAGTTTCCATATGGTGCTTAGGTGATCGATACTTTCTACGACAACATGAGAAGTGTTTCCATCCTTCTACGTTCTCTTTTCTCGGATGTGCTTTAATTAATTTACGTGGACTGGCTGTTATACTGAAGAACTTTAAGTCTTTAATTATTACTATGATTTTTCTTATCACTTGACCACTTCATCTGGGCAACCAGGGTTTAGTTTGGAAGACATTTGCAACATACTTCAATGCATTATTCTAAAACCTTCAGAAATGGAGGAACAGCGAGCCACATTTTTATTGAAGAAGAAAACCCTATTAACTGAAGGAAATGTACAAGACAACAAGACAATAATCAATAACTGAAGCTACAAGAGCCCAAAACATAAAGTATAAATTGGGAAGAATATTTTCCCTGCCTGATATTGTAACTGGTCTTTACAATTTCAAACAATTGCGCTTTAATCA AAAAACCCCACCTACATACGACCTTTGTTCAAAGTTAAATAATTATCGATGTTGACTTTTTCTTGATGTTCAGGTGAGTTCATTGTTCATGTTATAAACTCACCTCTGGAAAAAGTCAAATTCCCATGTCGAATTTATTAATACAAAGGCAAATCAATTCTAGGGCAAGTTTGTAAATCTATAATAATATTTTAGGTCCCAGGAGTGGCTAGGTGAAAGATCAAAGGTGAGAACAAAACTTATATTATCTAGAGTGGTTTCAGCAGCAGAAATCATTAGTCTTCCTTTGAAGAAAATGGCTTCTTTCTCTGTGGAGGAATTTGTGGGAAATGGGGTTCTTAAGGATCTGCTTCCCACTTTGCTGGATGAAGGCTGGGATGATGTACCAACCTTGAAGGTCATGAATTCCGAGGATATGAATGCAATAAATATGACACGACAACAGAAGGAAGCAATTGAGATAAGAACTTACCTGCATGACAGATCTCTGATGCAGTATGCAGACAGGCTAGAGTCCTCGGAGAAATGTTTGCCTGAACTTCTAAGCTTAAGCGTTGAGGATTTAACGTCTCAATTCCGTATGAAGAGAGGTCATATTGCACGTTTCCATGATAGAATTAGTTCGTGTGAGGATCCCTTGAACAAAAAGTTTGATGCCCCTTCCCCATCTACAAGTGTCAAGAGGACTTATCAGTCTAACAACTCAAAGAGGATGCAGAGTATGAGAAGCCGAACCTCTCAGGATAAAACAGTTGAGCAAGCACTGAGCGAGTTTAAAATCGAAGACGGGTATGTGTTCAAGGGGATTGTTGCAACCGAACTAGCTGGTCACAGAGCATGTGGTTGTGCGCAACCTCCTCATATTGTTGATAAAGTTGCTCCTTATTCTGCCGTTGAAAACATCTCCATTCAGAAATTAACTCCAGAGTATAAGATTGGAATGGAGCGTTTGGTGAAGACTAAGACTCCCCCTATGAAAGCATCAACACTATGGCAGGATAAGCCAGCCATTATCCTCTGTATTAGACGTCCTGGGTGCATCATGTGCAGAGCAGAAGCTCACCAGCTATATGCCAGAAAACCGATATTTGATGCATTAGGATACCAACTATTCGCTGTAATTCATGAACACATAGAATCAGAGGTGAAGGACTTCTGGCCCCGGTACTGGGGAGGCGCTGTAATCTTTGACCAAGGCAGAGGATTCTTCAAAGCTCTAGGTGGTGGTAAATTAATGAAGGAAAAATTCCTATTCGGATTTCTTTTCAACCCTCGGGCCATAGCAAATTATAAGCGTGCAAAAGCAATGGGAGTGAAGCAAAACTTCAATGGAGAAGGAGAAATTAAGGGTGGTCTGTTCATTCTTGGCTCAGCTAAGCGTGGTATTGCTTACCAGTTTATTGAGCGGAACTTCGGGGACTGGGCGCCTCTTTCTGAAGTAATTGAGATCTGTACAAAAATACAGAGCCAGCCACAAGCTCCAGGGGTATCCATCAAACCATCCCAAAAAGATAACCGAAGTTCGTCCCTAGAGTAATACAAATTCTCTGGAGTTTCCATATGGTGCTTAGGTGATCGATACTTTCTACGACAACATGAGAAGTGTTTCCATCCTTCTACGTTCTCTTTTCTCGGATGTGCTTTAATTAATTTACGTGGACTGGCTGTTATACTGAAGAACTTTAAGTCTTTAATTATTACTATGATTTTTCTTATCACTTGACCACTTCATCTGGGCAACCAGGGTTTAGTTTGGAAGACATTTGCAACATACTTCAATGCATTATTCTAAAACCTTCAGAAATGGAGGAACAGCGAGCCACATTTTTATTGAAGAAGAAAACCCTATTAACTGAAGGAAATGTACAAGACAACAAGACAATAATCAATAACTGAAGCTACAAGAGCCCAAAACATAAAGTATAAATTGGGAAGAATATTTTCCCTGCCTGATATTGTAACTGGTCTTTACAATTTCAAACAATTGCGCTTTAATCA ATGGCTTCTTTCTCTGTGGAGGAATTTGTGGGAAATGGGGTTCTTAAGGATCTGCTTCCCACTTTGCTGGATGAAGGCTGGGATGATGTACCAACCTTGAAGGTCATGAATTCCGAGGATATGAATGCAATAAATATGACACGACAACAGAAGGAAGCAATTGAGATAAGAACTTACCTGCATGACAGATCTCTGATGCAGTATGCAGACAGGCTAGAGTCCTCGGAGAAATGTTTGCCTGAACTTCTAAGCTTAAGCGTTGAGGATTTAACGTCTCAATTCCGTATGAAGAGAGGTCATATTGCACGTTTCCATGATAGAATTAGTTCGTGTGAGGATCCCTTGAACAAAAAGTTTGATGCCCCTTCCCCATCTACAAGTGTCAAGAGGACTTATCAGTCTAACAACTCAAAGAGGATGCAGAGTATGAGAAGCCGAACCTCTCAGGATAAAACAGTTGAGCAAGCACTGAGCGAGTTTAAAATCGAAGACGGGTATGTGTTCAAGGGGATTGTTGCAACCGAACTAGCTGGTCACAGAGCATGTGGTTGTGCGCAACCTCCTCATATTGTTGATAAAGTTGCTCCTTATTCTGCCGTTGAAAACATCTCCATTCAGAAATTAACTCCAGAGTATAAGATTGGAATGGAGCGTTTGGTGAAGACTAAGACTCCCCCTATGAAAGCATCAACACTATGGCAGGATAAGCCAGCCATTATCCTCTGTATTAGACGTCCTGGGTGCATCATGTGCAGAGCAGAAGCTCACCAGCTATATGCCAGAAAACCGATATTTGATGCATTAGGATACCAACTATTCGCTGTAATTCATGAACACATAGAATCAGAGGTGAAGGACTTCTGGCCCCGGTACTGGGGAGGCGCTGTAATCTTTGACCAAGGCAGAGGATTCTTCAAAGCTCTAGGTGGTGGTAAATTAATGAAGGAAAAATTCCTATTCGGATTTCTTTTCAACCCTCGGGCCATAGCAAATTATAAGCGTGCAAAAGCAATGGGAGTGAAGCAAAACTTCAATGGAGAAGGAGAAATTAAGGGTGGTCTGTTCATTCTTGGCTCAGCTAAGCGTGGTATTGCTTACCAGTTTATTGAGCGGAACTTCGGGGACTGGGCGCCTCTTTCTGAAGTAATTGAGATCTGTACAAAAATACAGAGCCAGCCACAAGCTCCAGGGGTATCCATCAAACCATCCCAAAAAGATAACCGAAGTTCGTCCCTAGAGTAA MASFSVEEFVGNGVLKDLLPTLLDEGWDDVPTLKVMNSEDMNAINMTRQQKEAIEIRTYLHDRSLMQYADRLESSEKCLPELLSLSVEDLTSQFRMKRGHIARFHDRISSCEDPLNKKFDAPSPSTSVKRTYQSNNSKRMQSMRSRTSQDKTVEQALSEFKIEDGYVFKGIVATELAGHRACGCAQPPHIVDKVAPYSAVENISIQKLTPEYKIGMERLVKTKTPPMKASTLWQDKPAIILCIRRPGCIMCRAEAHQLYARKPIFDALGYQLFAVIHEHIESEVKDFWPRYWGGAVIFDQGRGFFKALGGGKLMKEKFLFGFLFNPRAIANYKRAKAMGVKQNFNGEGEIKGGLFILGSAKRGIAYQFIERNFGDWAPLSEVIEICTKIQSQPQAPGVSIKPSQKDNRSSSLE Homology
BLAST of Lsi04G003300 vs. ExPASy Swiss-Prot
Match: Q3ZBK2 (Peroxiredoxin-like 2A OS=Bos taurus OX=9913 GN=PRXL2A PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27 Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy Swiss-Prot
Match: Q6AXX6 (Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26 Identity = 74/192 (38.54%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy Swiss-Prot
Match: Q9BRX8 (Peroxiredoxin-like 2A OS=Homo sapiens OX=9606 GN=PRXL2A PE=1 SV=3) HSP 1 Score: 120.9 bits (302), Expect = 3.3e-26 Identity = 72/191 (37.70%), Postives = 101/191 (52.88%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy Swiss-Prot
Match: A0JPD7 (Peroxiredoxin-like 2A OS=Xenopus tropicalis OX=8364 GN=prxl2a PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.6e-25 Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy Swiss-Prot
Match: Q9CYH2 (Peroxiredoxin-like 2A OS=Mus musculus OX=10090 GN=Prxl2a PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 2.1e-25 Identity = 72/195 (36.92%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy TrEMBL
Match: A0A0A0KWA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G607450 PE=4 SV=1) HSP 1 Score: 766.5 bits (1978), Expect = 5.5e-218 Identity = 378/412 (91.75%), Postives = 392/412 (95.15%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy TrEMBL
Match: A0A5D3CFB7 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00340 PE=4 SV=1) HSP 1 Score: 754.6 bits (1947), Expect = 2.2e-214 Identity = 375/412 (91.02%), Postives = 388/412 (94.17%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy TrEMBL
Match: A0A1S3BG00 (uncharacterized protein LOC103489208 OS=Cucumis melo OX=3656 GN=LOC103489208 PE=4 SV=1) HSP 1 Score: 754.6 bits (1947), Expect = 2.2e-214 Identity = 375/412 (91.02%), Postives = 388/412 (94.17%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy TrEMBL
Match: A0A6J1FZD1 (uncharacterized protein LOC111449306 OS=Cucurbita moschata OX=3662 GN=LOC111449306 PE=4 SV=1) HSP 1 Score: 727.6 bits (1877), Expect = 2.8e-206 Identity = 357/404 (88.37%), Postives = 377/404 (93.32%), Query Frame = 0
BLAST of Lsi04G003300 vs. ExPASy TrEMBL
Match: A0A6J1HZY0 (uncharacterized protein LOC111467742 OS=Cucurbita maxima OX=3661 GN=LOC111467742 PE=4 SV=1) HSP 1 Score: 725.7 bits (1872), Expect = 1.1e-205 Identity = 355/404 (87.87%), Postives = 377/404 (93.32%), Query Frame = 0
BLAST of Lsi04G003300 vs. NCBI nr
Match: XP_038893035.1 (uncharacterized protein LOC120081923 isoform X2 [Benincasa hispida]) HSP 1 Score: 786.2 bits (2029), Expect = 1.4e-223 Identity = 390/413 (94.43%), Postives = 400/413 (96.85%), Query Frame = 0
BLAST of Lsi04G003300 vs. NCBI nr
Match: XP_004135422.1 (uncharacterized protein LOC101217484 [Cucumis sativus] >KGN52006.1 hypothetical protein Csa_008277 [Cucumis sativus]) HSP 1 Score: 766.5 bits (1978), Expect = 1.1e-217 Identity = 378/412 (91.75%), Postives = 392/412 (95.15%), Query Frame = 0
BLAST of Lsi04G003300 vs. NCBI nr
Match: XP_008446485.1 (PREDICTED: uncharacterized protein LOC103489208 [Cucumis melo] >KAA0034492.1 Thioredoxin-like protein [Cucumis melo var. makuwa] >TYK09046.1 Thioredoxin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 754.6 bits (1947), Expect = 4.5e-214 Identity = 375/412 (91.02%), Postives = 388/412 (94.17%), Query Frame = 0
BLAST of Lsi04G003300 vs. NCBI nr
Match: XP_038893034.1 (uncharacterized protein LOC120081923 isoform X1 [Benincasa hispida]) HSP 1 Score: 754.2 bits (1946), Expect = 5.9e-214 Identity = 370/390 (94.87%), Postives = 378/390 (96.92%), Query Frame = 0
BLAST of Lsi04G003300 vs. NCBI nr
Match: XP_023542850.1 (uncharacterized protein LOC111802646 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 728.0 bits (1878), Expect = 4.5e-206 Identity = 357/404 (88.37%), Postives = 377/404 (93.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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