Lsi04G002950 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G002950
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	coiled-coil domain-containing protein 130-like
Location	chr04: 2975723 .. 2980195 (-)
RNA-Seq Expression	Lsi04G002950
Synteny	Lsi04G002950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACGGAACTTGTAAAGGTGGTATATATACGACGGTGCCAAATTTTAATTGAATCAAAATCTAGGAAGTACGAACGATTGCTTGTTTCATTCAATTCGCATCTGCAGATTTATTGAAGGAAGTTGAAGGAGACGACTGCGATCCATAATGGTATGTGATTTTGTTTCTCAATTTTTAGGGTTTTTTTTTGCTTTATGATTATGATGTGATTCAACGTGTTCGTAGAAATCAGGGTGTGGAATCGATTTTGTTGGTTCGATCGTTTGCCCTATGCTGGAGCGATTATCATTAGGTTTTTTCTTATTGTGAAAGAGATTAGCGGATACATTTGGGAATTGAGTCTATTATTGGTCATCGTTTTTCCGTAGGTGAATTATATGCTTCTGGTAGTTGAAGTTACTATCTTTCACAATTGTTTTAGGTCGAGAATTGTAGAACATGTTGTTGGATTTAACCTGAAAATTTATTGTCTAGGGATGGTTCTTGCATGATTTATGCCAAGTAATTTAAGGGTGTCTTGGAAAACTAACTTCAAATTCGCGTTCTATATGTTTTTCCAAACTCATAATTTTGGAAGAAGAAGAATTTCATGTCAGTTTGACAGATCAAATTGAATCCTGAAGGGTAGGCCATTTTTTTAAAGAACAAAACAATTAATTAAAATGGTTTATGTAGATATATTGGATACAGATCAAATGATTTCGACAATTGAGTGATTTTGGTCTAAAATTATGGAATCTGTTGTTGGATATGACATCAAATGTGATTTTCTGGAGATGGATCTTGGAAGTTTTGTGCAAAGTAATTTAGAAAAAAAAACATTTGCTATTTGATAAAGTTGACTCTTTGATTAGCTAGGCAACTTTCCTTCAAGTTGTAAATTTTATTAGATTGTATTTCATGTGAAACTGTTGCCTGGGAAGTCGATCAACTTGGTCTTCAAATTGGATCATGTATATATGTATGTTTCTAATTCATTTTTTTGTTTAACCTTTCTACTGCATCAAATTGTTGATTTTTCTTTTCAGAAAAACTTAAAGGAATGAATTATTAATATATGATTGGCAATACATATCGAAGTGTTGAGGCTTATAAACCTTTACTGTTTTGCAATTTCCAGTCTTCGCTTGCAGCTGCGAGAGCAGATAACTTTTACTATCCGCCAGAATGGACCCCAAAACAGGTACATTTCTTATTCAATCACATTAGTGCAATGTGCAGTAACTATTCTCCAAAAGAAATATCCATATCCTAACATAGATTTCCAGATTTCAGATTCTCACCCTGACTTTTCCTGTTTCAGGGGTCTTTGAACAAATTTCATGGTCAACATGCTTTGAGAGAGAGAGCAAGGAAATTAGATCAGGGCATCCTGATAATAAGGTAGGTAGCTAATGAGAACTCATCTTTCGGAAATTTTGGCTTGGGATTGATGATCTTATTTGGAGTGTGGGGAATGGTGCCAAGGCATCCACTTTTGATGCTTCAACATCGTTGCCTAGGTTCCCTTTCCTTTTTAAAATAGGGGTTATGTTATTTTTTTTTTAAAAAATAAAGTGAGATAATTTACACGTTGATGATTTTATTTGTGTATTCAGTTCTCTAATTAGTTGGAATGTATTGCTTTTCTAGGTTCGAGATGCCTTACAATATATGGTGTGGTGGCTGCAACTCAATGATAGCAAAGGGTGTTAGGTTCAATGCGGAGAAAAAGCAAGTTGGAAACTATTATTCTACAAAGGTATTGTTCATGGCTGATTGTAACATATTTTTGGCTTTTGGTGCTAGATTTGATGGTTTTATTATGCAAAGAAACTATGACCACATACTTTGACACACATACACAATGTTGTACCCTTTTTCCACTTGGTTTTATCATTGATTTTTAGCAATCTTTATAATGCACATACATTCTTACCTAGTGTTCACATGCAATATTTATTTACTTATTGTTCACATTTTTCTTGGTACGTCTGATTTCTGCTCCATATGTATGAAGCTTGTTTAGTGGAGCATTTCTGTATTTCTGCTGCTACCTAATAATTTATCACTGTGAACTTCTTGAATTGGTATTAGGCTTTCCCCTTGTCTTTGTCTCCACCAGTGTTTTGTATTCTGTAATATACTTGTCCATTGTTCTCTTATGTATCATGTTATTAAGCATTTGTACGAGAATTCTCATTCAATCTTTACACAACTTTTAATTTCTCAGCAGCAAACTTATGTTGTCAACATTGGTATTAACTTTTTAGTTATTAACCTTGCTATCCGACCTTGACCACCGGATTGGAATAGTGTCTTACTATCATAGAATCCATGATGATGCACAGTTTGGAAATTGAGTTCATAAACTGATTTTTTTCTCTCTCCTAGAATCAACAAAACTGTTTAACAGCTTATTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTTTGTTCTTATGGATGGATCATTTTTTTTAGAACTTCAATATACAATTTGTACTAAAAAAACTTCAATATACAAATTGGTGAATGGTGATTTCTTGTGGTTGTAACATCCTGTTAGAAAAAAACATGACCAGTTTCTATAGACCGTTCTGAAGAAAAGTTTTCAGAAGTGGGGTATAGAAATCACACCCAAACAGCTCTTGAGTGACTAATATTCTCTTCTTGCTTCTTTCAGATATGGAGCTTTACTATGAAAGCAGCATGCTGTAGACAAGAGATTGTTATTCAGACCGATCCAAAAAATTGTGAGTATGTGATTATCAGTGGTGCACAACGGAAAACTGAGGAATATGACATAGAGGATGCAGAAACCTTTGAACTCCCTGCAGATGAAGGTGATTATTGTGAACACTAATTACATTTATTTATCAGTGCCATTAAACTTAACTGTCTTTTCATCATGTTTCATTGTTAAATCTCCTGGTCTTGTAATTTACATGTTGACATCATCATGCATATATGTAAAGGTAGAGTCTCATAACATATATTGAAAGCCTGATGGTTTAATCCTTCAGAATGTTATGTAACCCTTTTGAATATATTTTCTACAGAAAAGGGTAAGCTTGCAGATCCATTTTATCGACTTGAACACCAGGAAAAAGATATGCAGAAAAAGAAAGAAGCCGAGCCAGTATTGGTTCGGCTACAGCGACTCTCAGATTCTAGACATTCAGATGACTATAGTCGGAATAGAACACTTCGAGCTCAGCTCAGAGTATGTCATCTAATCCTTACCATGTTTCTCACCTCTTTCTGTTCTGCTTTTAATTTTGAATGATTATATGCTAATACACTTTTTTATATCTTCTCAGAGTCAAAAGAAAAGAGTTGCTGAAGAAGAAAATGTTTCTAGGAAGATGGGCCTCGGTATACGATTGCTTCCAGCAACTCAAGAAGATTCTGCAGCTGCAGCTCGCATGAAGTTCTCTTCAAAGTTTGAGAAGAATCGTAGGGATAAACGGGCATTGATTCATGCTTCCTCGATATTTAATGGATCATCCACTTCTTCCATGCCTGATAAGAAACGATTGGACCTGGAATCCAAGAGAAGGAAGATCTGTGCATCTGCGGCTTCAAACATACTGACAGGGGGCTTCAAGCCATCATCTTGGTCACGAAGTGCAGCTAATTCAAGCCAACTGGAAGGAACTTCTGTAACTACCAGACGATTGTAACGTGAATGCGTTTTTCAAATCTAGGTCTAGCTCGTTTCTTTCATGTATGTATATAGATTTTATGTTGGCGGGTCTATCTGATATTTTTTTCCCCCTAGAATCTCATTGTAATATATTGTGTTTCATTTCTGGCGAATGTGCAAGAATTTCTTAAGAATTATGAAATCGAAATTTGAATATATGTTTTGAGGCTTATATATATATCTTCATTTGTTTCGTAT

mRNA sequence

CCGACGGAACTTGTAAAGGTGGTATATATACGACGGTGCCAAATTTTAATTGAATCAAAATCTAGGAAGTACGAACGATTGCTTGTTTCATTCAATTCGCATCTGCAGATTTATTGAAGGAAGTTGAAGGAGACGACTGCGATCCATAATGTCTTCGCTTGCAGCTGCGAGAGCAGATAACTTTTACTATCCGCCAGAATGGACCCCAAAACAGGGGTCTTTGAACAAATTTCATGGTCAACATGCTTTGAGAGAGAGAGCAAGGAAATTAGATCAGGGCATCCTGATAATAAGGCATCCACTTTTGATGCTTCAACATCGTTGCCTAGGTTCGAGATGCCTTACAATATATGGTGTGGTGGCTGCAACTCAATGATAGCAAAGGGTGTTAGGTTCAATGCGGAGAAAAAGCAAGTTGGAAACTATTATTCTACAAAGATATGGAGCTTTACTATGAAAGCAGCATGCTGTAGACAAGAGATTGTTATTCAGACCGATCCAAAAAATTGTGAGTATGTGATTATCAGTGGTGCACAACGGAAAACTGAGGAATATGACATAGAGGATGCAGAAACCTTTGAACTCCCTGCAGATGAAGAATGTTATGTAACCCTTTTGAATATATTTTCTACAGAAAAGGGTAAGCTTGCAGATCCATTTTATCGACTTGAACACCAGGAAAAAGATATGCAGAAAAAGAAAGAAGCCGAGCCAGTATTGGTTCGGCTACAGCGACTCTCAGATTCTAGACATTCAGATGACTATAGTCGGAATAGAACACTTCGAGCTCAGCTCAGAAGTCAAAAGAAAAGAGTTGCTGAAGAAGAAAATGTTTCTAGGAAGATGGGCCTCGGTATACGATTGCTTCCAGCAACTCAAGAAGATTCTGCAGCTGCAGCTCGCATGAAGTTCTCTTCAAAGTTTGAGAAGAATCGTAGGGATAAACGGGCATTGATTCATGCTTCCTCGATATTTAATGGATCATCCACTTCTTCCATGCCTGATAAGAAACGATTGGACCTGGAATCCAAGAGAAGGAAGATCTGTGCATCTGCGGCTTCAAACATACTGACAGGGGGCTTCAAGCCATCATCTTGGTCACGAAGTGCAGCTAATTCAAGCCAACTGGAAGGAACTTCTGTAACTACCAGACGATTGTAACGTGAATGCGTTTTTCAAATCTAGGTCTAGCTCGTTTCTTTCATGTATGTATATAGATTTTATGTTGGCGGGTCTATCTGATATTTTTTTCCCCCTAGAATCTCATTGTAATATATTGTGTTTCATTTCTGGCGAATGTGCAAGAATTTCTTAAGAATTATGAAATCGAAATTTGAATATATGTTTTGAGGCTTATATATATATCTTCATTTGTTTCGTAT

Coding sequence (CDS)

ATGGACCCCAAAACAGGGGTCTTTGAACAAATTTCATGGTCAACATGCTTTGAGAGAGAGAGCAAGGAAATTAGATCAGGGCATCCTGATAATAAGGCATCCACTTTTGATGCTTCAACATCGTTGCCTAGGTTCGAGATGCCTTACAATATATGGTGTGGTGGCTGCAACTCAATGATAGCAAAGGGTGTTAGGTTCAATGCGGAGAAAAAGCAAGTTGGAAACTATTATTCTACAAAGATATGGAGCTTTACTATGAAAGCAGCATGCTGTAGACAAGAGATTGTTATTCAGACCGATCCAAAAAATTGTGAGTATGTGATTATCAGTGGTGCACAACGGAAAACTGAGGAATATGACATAGAGGATGCAGAAACCTTTGAACTCCCTGCAGATGAAGAATGTTATGTAACCCTTTTGAATATATTTTCTACAGAAAAGGGTAAGCTTGCAGATCCATTTTATCGACTTGAACACCAGGAAAAAGATATGCAGAAAAAGAAAGAAGCCGAGCCAGTATTGGTTCGGCTACAGCGACTCTCAGATTCTAGACATTCAGATGACTATAGTCGGAATAGAACACTTCGAGCTCAGCTCAGAAGTCAAAAGAAAAGAGTTGCTGAAGAAGAAAATGTTTCTAGGAAGATGGGCCTCGGTATACGATTGCTTCCAGCAACTCAAGAAGATTCTGCAGCTGCAGCTCGCATGAAGTTCTCTTCAAAGTTTGAGAAGAATCGTAGGGATAAACGGGCATTGATTCATGCTTCCTCGATATTTAATGGATCATCCACTTCTTCCATGCCTGATAAGAAACGATTGGACCTGGAATCCAAGAGAAGGAAGATCTGTGCATCTGCGGCTTCAAACATACTGACAGGGGGCTTCAAGCCATCATCTTGGTCACGAAGTGCAGCTAATTCAAGCCAACTGGAAGGAACTTCTGTAACTACCAGACGATTGTAA

Protein sequence

MDPKTGVFEQISWSTCFERESKEIRSGHPDNKASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEENVSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKKRLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL

Homology

[Close]

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot
Match: Q5EA37 (Coiled-coil domain-containing protein 130 OS=Bos taurus OX=9913 GN=CCDC130 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-38
Identity = 110/281 (39.15%), Postives = 151/281 (53.74%), Query Frame = 0


Query: 26  SGHP-DNKASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSF 85
           + HP   +A        + RFEMPYNIWC GC + I  GVR+NAEKK+VGNYY+T I+ F
Sbjct: 28  NSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRF 87

Query: 86  TMKAACCRQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFS 145
            MK   C   I +QTDP NC+YVI+SGAQRK E +D+ED E             +L    
Sbjct: 88  RMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMEDNE------------QVLTTEH 147

Query: 146 TEKGKL-ADPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQK 205
            +K KL  D  +RLEH E D    K+A P L  +Q  + S   DD++ N  LR + R +K
Sbjct: 148 EKKQKLEMDAMFRLEHGEADRSTLKKALPTLSHIQE-AQSAWKDDFALNSMLRKRFREKK 207

Query: 206 KRVAEEEN----VSRKMGLGIRLLPATQEDSAAAARMKFSS--KFEKNRRDKRALIHASS 265
           K + EEE     +  K  L I L+P T++D   AA +KF +   +E  ++ KR  I + S
Sbjct: 208 KAMQEEEERDQALQAKASLAIPLVPETEDDRRLAALLKFHTLDSYEDKQKLKRTEIISRS 267

Query: 266 IF----NGSSTSSMPDKKRLDLESKRRKICASAASNILTGG 295
            F      S++SS   K    L+   +   A+  S+ +T G
Sbjct: 268 WFPSTPGASASSSSSSKTNSVLKKLAQNRRATPTSSPVTMG 295

[Close]

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot
Match: Q6DJK9 (Coiled-coil domain-containing protein 130 OS=Xenopus laevis OX=8355 GN=ccdc130 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-38
Identity = 98/244 (40.16%), Postives = 140/244 (57.38%), Query Frame = 0


Query: 25  RSGHP-DNKASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWS 84
           R+ HP   +A        + RFEMPYNIWC GC + I  GVR+NAEKK+VGNYY+T I+ 
Sbjct: 27  RNSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYR 86

Query: 85  FTMKAACCRQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIF 144
           F MK   C   I +QTDP +C+YVI+SGAQRK E +D++D E             +L   
Sbjct: 87  FRMKCHLCVNYIEMQTDPASCDYVIVSGAQRKEERWDMQDNE------------QILTTE 146

Query: 145 STEKGKL-ADPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQ 204
             +K +L  D  +RLEH  +D  K + A P L  LQ +  S   DD++ N  LR++ R +
Sbjct: 147 HEQKQRLETDSMFRLEHGVQDKAKLQRAAPSLSELQEV-QSAWKDDFAINSLLRSKFREE 206

Query: 205 KKRVAEEEN----VSRKMGLGIRLLPATQEDSAAAARMKFSS--KFEKNRRDKRALIHAS 261
           KK++ EEE     +  K  L ++L+P  +ED   AA +K+ S   +E+ ++ KR+ I   
Sbjct: 207 KKQIKEEEERDQALLTKASLDLKLVPEVEEDKKIAALLKYRSLESYEQKQKKKRSEICNR 257

[Close]

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot
Match: Q66I85 (Coiled-coil domain-containing protein 130 homolog OS=Danio rerio OX=7955 GN=ccdc130 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.9e-38
Identity = 99/230 (43.04%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 44  RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRQEIVIQTDPKN 103
           RFEMPYNIWC GC + I  GVR+NAEKK+VGNYY+T I+ F MK   C   I +QTDP  
Sbjct: 47  RFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRFRMKCHLCVNYIEMQTDPAT 106

Query: 104 CEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKL-ADPFYRLEHQEK 163
           C+YVI+SGAQRK E +D+ + E             +L     EK KL  D  Y+L+H  K
Sbjct: 107 CDYVIVSGAQRKEERWDMAENE------------QILTTERNEKEKLETDAMYKLDHGGK 166

Query: 164 DMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN----VSRKMGL 223
           D +K + A P L  LQ    S   DD+  N  LR + R++KK +AEEE     V  + GL
Sbjct: 167 DKEKLRAAIPSLNELQE-HQSGWKDDFQLNSALRRKFRTEKKVIAEEEEKDNAVRLRTGL 226

Query: 224 GIRLLPATQEDSAAAARMKFSS--KFEKNRRDKRALIHASSIFNGSSTSS 267
            I L+P  +ED   A+ + F S   +E  ++ KR  I + S FN  S+++
Sbjct: 227 SIPLVPEREEDKKLASLLTFQSPDSYEDKKQWKRQEISSRSWFNSPSSAA 263

[Close]

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot
Match: P13994 (Coiled-coil domain-containing protein 130 OS=Homo sapiens OX=9606 GN=CCDC130 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 5.0e-38
Identity = 108/272 (39.71%), Postives = 146/272 (53.68%), Query Frame = 0


Query: 26  SGHP-DNKASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSF 85
           + HP   +A        + RFEMPYNIWC GC + I  GVR+NAEKK+VGNYY+T I+ F
Sbjct: 28  NSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRF 87

Query: 86  TMKAACCRQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFS 145
            MK   C   I +QTDP NC+YVI+SGAQRK E +D+ D E             +L    
Sbjct: 88  RMKCHLCVNYIEMQTDPANCDYVIVSGAQRKEERWDMADNE------------QVLTTEH 147

Query: 146 TEKGKL-ADPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQK 205
            +K KL  D  +RLEH E D    K+A P L  +Q  + S   DD++ N  LR + R +K
Sbjct: 148 EKKQKLETDAMFRLEHGEADRSTLKKALPTLSHIQE-AQSAWKDDFALNSMLRRRFREKK 207

Query: 206 KRVAEEEN----VSRKMGLGIRLLPATQEDSAAAARMKFSS--KFEKNRRDKRALIHASS 265
           K + EEE     +  K  L I L+P T++D   AA +KF +   +E  ++ KR  I + S
Sbjct: 208 KAIQEEEERDQALQAKASLTIPLVPETEDDRKLAALLKFHTLDSYEDKQKLKRTEIISRS 267

Query: 266 IF---NGSSTSSMPDKKRLDLESKRRKICASA 287
            F    GS++SS        L   RR   A++
Sbjct: 268 WFPSAPGSASSSKVSGVLKKLAQSRRTALATS 286

[Close]

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot
Match: Q32PZ9 (Coiled-coil domain-containing protein 130 OS=Rattus norvegicus OX=10116 GN=Ccdc130 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 103/252 (40.87%), Postives = 135/252 (53.57%), Query Frame = 0


Query: 26  SGHP-DNKASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSF 85
           + HP   +A        + RFEMPYNIWC GC + I  GVR+NAEKK+VGNYY+T I+ F
Sbjct: 28  NSHPLRERARKLSQGILIIRFEMPYNIWCDGCKNHIGMGVRYNAEKKKVGNYYTTPIYRF 87

Query: 86  TMKAACCRQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFS 145
            MK   C   I +QTDP NC+YVI+SGA RK E +D+ED E             +L    
Sbjct: 88  RMKCHLCVNYIEMQTDPANCDYVIVSGASRKEERWDMEDNE------------QVLTTEH 147

Query: 146 TEKGKL-ADPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQK 205
            +K KL  D  +RLEH E D    K+A P L  +Q  + +   DD++ N  LR   R +K
Sbjct: 148 EKKEKLETDAMFRLEHGEADRSTLKKALPTLSHIQE-AQNAWKDDFALNSMLRRHFREKK 207

Query: 206 KRVAEEEN----VSRKMGLGIRLLPATQEDS--AAAARMKFSSKFEKNRRDKRALIHASS 265
           K + EEE     +  K  L I L+P +++D   AA  R+     +E  +R KR  I   S
Sbjct: 208 KAMQEEEEKDQALQAKANLAIPLVPESEDDRRLAALLRLHTLDSYEDKQRMKRTEIIHRS 266

Query: 266 IF---NGSSTSS 267
            F    G STSS
Sbjct: 268 WFPSAQGPSTSS 266

[Close]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL
Match: A0A5A7SVJ6 (Coiled-coil domain-containing protein 130-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00670 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.8e-134
Identity = 255/289 (88.24%), Postives = 262/289 (90.66%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 59  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 118

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE            EKGKLA
Sbjct: 119 RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE------------EKGKLA 178

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRN+TLRAQLRSQKKRVAEEEN
Sbjct: 179 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNKTLRAQLRSQKKRVAEEEN 238

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPA QEDS AAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 239 VSRKMGLGIRLLPAAQEDSRAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 298

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS ++EGTSVT RRL
Sbjct: 299 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRIEGTSVTARRL 335

[Close]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL
Match: A0A1S3BFA8 (coiled-coil domain-containing protein 130-like OS=Cucumis melo OX=3656 GN=LOC103489246 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.8e-134
Identity = 255/289 (88.24%), Postives = 262/289 (90.66%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE            EKGKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE------------EKGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRN+TLRAQLRSQKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNKTLRAQLRSQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPA QEDS AAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 217 VSRKMGLGIRLLPAAQEDSRAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS ++EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRIEGTSVTARRL 313

[Close]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL
Match: A0A0A0KUF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608300 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.1e-133
Identity = 256/289 (88.58%), Postives = 261/289 (90.31%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAE FEL ADE            EKGKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAEVFELTADE------------EKGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRNRTLRAQLRSQKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNRTLRAQLRSQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPATQEDSAAAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 217 VSRKMGLGIRLLPATQEDSAAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS + EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRREGTSVTARRL 313

[Close]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL
Match: A0A6J1GZF2 (coiled-coil domain-containing protein 130-like OS=Cucurbita moschata OX=3662 GN=LOC111458893 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 253/291 (86.94%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAET ELPADE            E+GKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETLELPADE------------ERGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDY+RNRTLRAQLR QKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYTRNRTLRAQLRGQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
            SRKMGLGIRLLPAT+EDS+ AARMKFSSKFEKNRR+KRALIHASSIFNGSS+SSMPDKK
Sbjct: 217 ASRKMGLGIRLLPATEEDSSTAARMKFSSKFEKNRRNKRALIHASSIFNGSSSSSMPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSA--ANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTGGFKPSSWSRSA  ANSS+ EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGGFKPSSWSRSAAPANSSRREGTSVTARRL 315

[Close]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL
Match: A0A6J1J037 (coiled-coil domain-containing protein 130-like OS=Cucurbita maxima OX=3661 GN=LOC111482211 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 3.0e-131
Identity = 250/291 (85.91%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAET ELPADE            E+GKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETLELPADE------------ERGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDY+RNRTLRAQLR QKKR+AEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYTRNRTLRAQLRGQKKRIAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
            SRKMGLGIRLLPAT+EDS+ AARMKFSSKFEKNRR+KRALIHASSIFNGSS+SSMPDKK
Sbjct: 217 ASRKMGLGIRLLPATEEDSSTAARMKFSSKFEKNRRNKRALIHASSIFNGSSSSSMPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANS--SQLEGTSVTTRRL 321
           RLDLESKRRKICASAAS+ILTGGFKPSSWSRSAA +  S+LEGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASSILTGGFKPSSWSRSAAPATLSRLEGTSVTARRL 315

[Close]

BLAST of Lsi04G002950 vs. NCBI nr
Match: XP_038891426.1 (coiled-coil domain-containing protein 130-like [Benincasa hispida])

HSP 1 Score: 500.4 bits (1287), Expect = 1.2e-137
Identity = 262/289 (90.66%), Postives = 266/289 (92.04%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE            EKGKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE------------EKGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRNRTLRAQLRSQKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNRTLRAQLRSQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKN RDKRALIHASSIFNGSSTSSMPDKK
Sbjct: 217 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNHRDKRALIHASSIFNGSSTSSMPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANSS+LEGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSSRLEGTSVTARRL 313

[Close]

BLAST of Lsi04G002950 vs. NCBI nr
Match: KAA0034523.1 (coiled-coil domain-containing protein 130-like [Cucumis melo var. makuwa] >TYK09077.1 coiled-coil domain-containing protein 130-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 487.6 bits (1254), Expect = 7.9e-134
Identity = 255/289 (88.24%), Postives = 262/289 (90.66%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 59  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 118

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE            EKGKLA
Sbjct: 119 RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE------------EKGKLA 178

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRN+TLRAQLRSQKKRVAEEEN
Sbjct: 179 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNKTLRAQLRSQKKRVAEEEN 238

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPA QEDS AAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 239 VSRKMGLGIRLLPAAQEDSRAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 298

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS ++EGTSVT RRL
Sbjct: 299 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRIEGTSVTARRL 335

[Close]

BLAST of Lsi04G002950 vs. NCBI nr
Match: XP_008446551.1 (PREDICTED: coiled-coil domain-containing protein 130-like [Cucumis melo])

HSP 1 Score: 487.6 bits (1254), Expect = 7.9e-134
Identity = 255/289 (88.24%), Postives = 262/289 (90.66%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE            EKGKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADE------------EKGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRN+TLRAQLRSQKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNKTLRAQLRSQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPA QEDS AAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 217 VSRKMGLGIRLLPAAQEDSRAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS ++EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRIEGTSVTARRL 313

[Close]

BLAST of Lsi04G002950 vs. NCBI nr
Match: XP_004135117.1 (coiled-coil domain-containing protein 130 [Cucumis sativus] >KGN52042.1 hypothetical protein Csa_008081 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 2.3e-133
Identity = 256/289 (88.58%), Postives = 261/289 (90.31%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAE FEL ADE            EKGKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAEVFELTADE------------EKGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDYSRNRTLRAQLRSQKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYSRNRTLRAQLRSQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
           VSRKMGLGIRLLPATQEDSAAAA MKF SKFEKNRRDKRALIHASSIFNGSSTSS+PDKK
Sbjct: 217 VSRKMGLGIRLLPATQEDSAAAACMKFPSKFEKNRRDKRALIHASSIFNGSSTSSIPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTG FKPSSWSRSAANS + EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGNFKPSSWSRSAANSIRREGTSVTARRL 313

[Close]

BLAST of Lsi04G002950 vs. NCBI nr
Match: XP_022957516.1 (coiled-coil domain-containing protein 130-like [Cucurbita moschata])

HSP 1 Score: 482.3 bits (1240), Expect = 3.3e-132
Identity = 253/291 (86.94%), Postives = 263/291 (90.38%), Query Frame = 0


Query: 32  KASTFDASTSLPRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 91
           +A   D    + RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC
Sbjct: 37  RARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACC 96

Query: 92  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLA 151
           RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAET ELPADE            E+GKLA
Sbjct: 97  RQEIVIQTDPKNCEYVIISGAQRKTEEYDIEDAETLELPADE------------ERGKLA 156

Query: 152 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEEN 211
           DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRH+DDY+RNRTLRAQLR QKKRVAEEEN
Sbjct: 157 DPFYRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHADDYTRNRTLRAQLRGQKKRVAEEEN 216

Query: 212 VSRKMGLGIRLLPATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKK 271
            SRKMGLGIRLLPAT+EDS+ AARMKFSSKFEKNRR+KRALIHASSIFNGSS+SSMPDKK
Sbjct: 217 ASRKMGLGIRLLPATEEDSSTAARMKFSSKFEKNRRNKRALIHASSIFNGSSSSSMPDKK 276

Query: 272 RLDLESKRRKICASAASNILTGGFKPSSWSRSA--ANSSQLEGTSVTTRRL 321
           RLDLESKRRKICASAASNILTGGFKPSSWSRSA  ANSS+ EGTSVT RRL
Sbjct: 277 RLDLESKRRKICASAASNILTGGFKPSSWSRSAAPANSSRREGTSVTARRL 315

[Close]

BLAST of Lsi04G002950 vs. TAIR 10
Match: AT1G25682.1 (Family of unknown function (DUF572) )

HSP 1 Score: 361.3 bits (926), Expect = 8.0e-100
Identity = 191/277 (68.95%), Postives = 228/277 (82.31%), Query Frame = 0


Query: 44  RFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRQEIVIQTDPKN 103
           RFEMPYNIWCGGC+SMIAKGVRFNAEKKQVGNYYSTKIWSF MK+ CC+ EIVIQTDP+N
Sbjct: 49  RFEMPYNIWCGGCSSMIAKGVRFNAEKKQVGNYYSTKIWSFAMKSPCCKHEIVIQTDPQN 108

Query: 104 CEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPFYRLEHQEKD 163
           CEYVI SGAQ+K EEY+ EDAET EL A++            EKGKLADPFYRLEHQE D
Sbjct: 109 CEYVITSGAQKKVEEYEAEDAETMELTAEQ------------EKGKLADPFYRLEHQEVD 168

Query: 164 MQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQKKRVAEEENVSRKMGLGIRLL 223
           +QKKK AEP+LVRLQR+SD+RH+DDYS N+ LRAQLR  +KRVAEEE  SRK+GLGIRLL
Sbjct: 169 LQKKKAAEPLLVRLQRVSDARHADDYSLNKALRAQLRRHRKRVAEEETASRKLGLGIRLL 228

Query: 224 PATQEDSAAAARMKFSSKFEKNRRDKRALIHASSIFNGSSTSSMPDKKRLDLESKRRKIC 283
           P ++ED  AA+ +KF SKF+KNR+DKRALIHASSIF  SS SS   KKR++LE+KRRKI 
Sbjct: 229 PKSEEDIKAASNVKFKSKFDKNRKDKRALIHASSIFPESSYSS--SKKRMELEAKRRKIS 288

Query: 284 ASAASNILTGGFKPSSWSRSAANSSQLEGTSVTTRRL 321
           A++AS++L GGFK SS S +  ++S+ + +SV+ R+L
Sbjct: 289 AASASSLLRGGFKASSLSTN-PSASKPKVSSVSVRKL 310

[Close]

BLAST of Lsi04G002950 vs. TAIR 10
Match: AT1G25988.1 (Family of unknown function (DUF572) )

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-26
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 98  QTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPFYRL 157
           +TDP+NCEYVI SGAQ+K EEY+ EDAET EL A++            EKGKLADPFYRL
Sbjct: 27  KTDPQNCEYVITSGAQKKVEEYEAEDAETMELTAEQ------------EKGKLADPFYRL 86

Query: 158 EHQEKDMQKKKEAEPVLVRLQRLSDSRHSD 188
           EHQE D+QKKK AEP LVRLQR+SD+RH+D
Sbjct: 87  EHQEVDLQKKKAAEPFLVRLQRVSDARHAD 104

[Close]

BLAST of Lsi04G002950 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-10
Identity = 50/181 (27.62%), Postives = 88/181 (48.62%), Query Frame = 0


Query: 44  RFEMPYNIWCGGCNSMIAKGVRFNAEKKQV--GNYYSTKIWSFTMKAACCRQEIVIQTDP 103
           R  +P ++ CG C + I KG +FN+ K+ V    Y   +I+ F  K   C  E+ ++TDP
Sbjct: 34  RMMLPMSVRCGTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAELTMKTDP 93

Query: 104 KNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPFYRLEHQE 163
           +N +Y++ SGA R  E +  ED    E+  D++           +  ++ D    LE++ 
Sbjct: 94  QNSDYIVESGASRNYEPWRAEDE---EVDKDKQ---------KRDAEEMGDAMKSLENRT 153

Query: 164 KDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRS---QKKRVAEEENVSRKMGL 220
            D +++ +    L  ++ +  SRH+   S +  L A  R+   + KR+ EE+    K   
Sbjct: 154 LDSKREMDIIAALDEMKSMK-SRHA-TVSVDAMLEALQRTGAEKVKRIEEEDEAVIKSIF 200

[Close]

BLAST of Lsi04G002950 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-09
Identity = 50/188 (26.60%), Postives = 88/188 (46.81%), Query Frame = 0


Query: 44  RFEMPYNIWCGGCNSMIAKGVRFNAEKK---------QVGNYYSTKIWSFTMKAACCRQE 103
           R  +P ++ CG C + I KG +FN+ K+          V  Y   +I+ F  K   C  E
Sbjct: 34  RMMLPMSVRCGTCGNYIYKGTKFNSRKEDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAE 93

Query: 104 IVIQTDPKNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPF 163
           + ++TDP+N +Y++ SGA R  E +  ED    E+  D++           +  ++ D  
Sbjct: 94  LTMKTDPQNSDYIVESGASRNYEPWRAEDE---EVDKDKQ---------KRDAEEMGDAM 153

Query: 164 YRLEHQEKDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRS---QKKRVAEEEN 220
             LE++  D +++ +    L  ++ +  SRH+   S +  L A  R+   + KR+ EE+ 
Sbjct: 154 KSLENRTLDSKREMDIIAALDEMKSMK-SRHA-TVSVDAMLEALQRTGAEKVKRIEEEDE 207

[Close]

BLAST of Lsi04G002950 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05
Identity = 44/173 (25.43%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 44  RFEMPYNIWCGGCNSMIAKGVRFNAEKKQV--GNYYSTKIWSFTMKAACCRQEIVIQTDP 103
           R  +P  I C  C + +++G + N  ++ V    Y   KI  F  K + C  E++++TDP
Sbjct: 34  RSMVPLRIRCNTCGNYMSEGTKINCREENVIGETYLGIKIHRFYFKCSKCCTELILKTDP 93

Query: 104 KNCEYVIISGAQRKTEEYDIEDAETFELPADEECYVTLLNIFSTEKGKLADPFYRLEHQE 163
           KN  YV  SGA    +++  E+ E  E   D    +    + S  +    D    L+ + 
Sbjct: 94  KNSSYVAESGATCVYDQH--EEEEQAEDGGDRMSSLEKRTLVSKRE---VDVMAALD-EM 153

Query: 164 KDMQKKKEAEPVLVRLQRLSDSRHSDDYSRNRTLRAQLRSQK----KRVAEEE 211
           K M+ ++ +  V   L+ LS     ++        A ++S K    +R+ +EE
Sbjct: 154 KSMKSRRVSVSVDSMLEDLSKRHKEEEEVAKEEDAALIKSTKFGKQRRIVDEE 200

The following BLAST results are available for this feature:

BLAST of Lsi04G002950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EA37	1.7e-38	39.15	Coiled-coil domain-containing protein 130 OS=Bos taurus OX=9913 GN=CCDC130 PE=2 ...	[more]
Q6DJK9	2.2e-38	40.16	Coiled-coil domain-containing protein 130 OS=Xenopus laevis OX=8355 GN=ccdc130 P...	[more]
Q66I85	2.9e-38	43.04	Coiled-coil domain-containing protein 130 homolog OS=Danio rerio OX=7955 GN=ccdc...	[more]
P13994	5.0e-38	39.71	Coiled-coil domain-containing protein 130 OS=Homo sapiens OX=9606 GN=CCDC130 PE=...	[more]
Q32PZ9	1.6e-36	40.87	Coiled-coil domain-containing protein 130 OS=Rattus norvegicus OX=10116 GN=Ccdc1...	[more]

BLAST of Lsi04G002950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVJ6	3.8e-134	88.24	Coiled-coil domain-containing protein 130-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BFA8	3.8e-134	88.24	coiled-coil domain-containing protein 130-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KUF0	1.1e-133	88.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608300 PE=3 SV=1	[more]
A0A6J1GZF2	1.6e-132	86.94	coiled-coil domain-containing protein 130-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J037	3.0e-131	85.91	coiled-coil domain-containing protein 130-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Lsi04G002950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891426.1	1.2e-137	90.66	coiled-coil domain-containing protein 130-like [Benincasa hispida]	[more]
KAA0034523.1	7.9e-134	88.24	coiled-coil domain-containing protein 130-like [Cucumis melo var. makuwa] >TYK09...	[more]
XP_008446551.1	7.9e-134	88.24	PREDICTED: coiled-coil domain-containing protein 130-like [Cucumis melo]	[more]
XP_004135117.1	2.3e-133	88.58	coiled-coil domain-containing protein 130 [Cucumis sativus] >KGN52042.1 hypothet...	[more]
XP_022957516.1	3.3e-132	86.94	coiled-coil domain-containing protein 130-like [Cucurbita moschata]	[more]

BLAST of Lsi04G002950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25682.1	8.0e-100	68.95	Family of unknown function (DUF572)	[more]
AT1G25988.1	3.4e-26	66.67	Family of unknown function (DUF572)	[more]
AT1G17130.1	3.4e-10	27.62	Family of unknown function (DUF572)	[more]
AT1G17130.2	2.2e-09	26.60	Family of unknown function (DUF572)	[more]
AT2G32050.1	2.0e-05	25.43	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..320
None	No IPR available	PANTHER	PTHR12111:SF9	BNAA08G19540D PROTEIN	coord: 27..320
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 44..278 e-value: 9.5E-57 score: 193.1
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 27..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G002950.1	Lsi04G002950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0005684	U2-type spliceosomal complex