Lsi04G002880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G002880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	chr04: 2883210 .. 2884262 (-)
RNA-Seq Expression	Lsi04G002880
Synteny	Lsi04G002880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGAATTTGCATTGACGAAAGCACTTCCACTGAATCTCAATCCCCGGTGGCTAAATCTCCGCCGCCGGAGACCAGTCTTTGCCGCGTCGGGAGTGGCGTCACTAGTGTAGTTCTCGATTCGGACTCCAGCGGCGGCGGAGTTGAGGCAGAGTCCCGGAAACTACCGTCGTCTCGTTTCAAAGGAGTGGTCCCACAGCCGAACGGCCGATGGGGGGCCCAGATTTACGAGAAACACCAAAGAGTATGGCTGGGAACGTTCAACGAAGAGGATGAAGCAGCACGTGCGTACGATGTGGCTGCCCAACGTTTCCGTGGCCGTGACGCCGTTACCAATTTCAAACCTTTATCACACCCTGGTGAAGAAGACGACGTCGTTTCCGCTTTCCTCAACTCCCATTCCAAGGCTGAGATCGTCGACATGCTACGTAAGCACACTTACTTAGACGAACTTCACCAAAGTAGACGAAACGCCGGGTTATACGGTTCGGATCGGAAACGAAACCGTTCATTATCCGGTTCGGATACTGACCCGGAAACCGCTCGTGAACTTCTATTCGAAAAAGCCGTTACTCCAAGCGATGTGGGAAAATTGAACCGTTTAGTCATACCAAAACAACACGCTGAAAAAAATTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCCAAAGGTCTCTTGTTGAACTTCGAAGATGGAGGAGGTAAAGTTTGGCGGTTCAGGTACTCGTATTGGAACAGTAGCCAAAGCTATGTGCTGACCAAAGGATGGAGCCGGTTCGTGAAAGAAAAGAATTTGAAAGCCGGTGACATTGTTAGCTTCCTGAAATCGACCGGACAAGATAAAGATAAACAGCTTTACATTGAATGGAAGGCACGAAAGGCTTCTACTACAACCGGGTCGGACATGAACCCGGTTCAGACCTTCAGACTATTTGGAGTTGACATTATCAAAGTGTCGCCAAGTAGTGGGTGTAGTGAGAAGAGGAGGAGAGAATTGGAATTTCTCGCTTTGCAATGTACCAAAAAACAAAGGATTGTCGGAGCATTGTAA

mRNA sequence

ATGGACGGAATTTGCATTGACGAAAGCACTTCCACTGAATCTCAATCCCCGGTGGCTAAATCTCCGCCGCCGGAGACCAGTCTTTGCCGCGTCGGGAGTGGCGTCACTAGTGTAGTTCTCGATTCGGACTCCAGCGGCGGCGGAGTTGAGGCAGAGTCCCGGAAACTACCGTCGTCTCGTTTCAAAGGAGTGGTCCCACAGCCGAACGGCCGATGGGGGGCCCAGATTTACGAGAAACACCAAAGAGTATGGCTGGGAACGTTCAACGAAGAGGATGAAGCAGCACGTGCGTACGATGTGGCTGCCCAACGTTTCCGTGGCCGTGACGCCGTTACCAATTTCAAACCTTTATCACACCCTGGTGAAGAAGACGACGTCGTTTCCGCTTTCCTCAACTCCCATTCCAAGGCTGAGATCGTCGACATGCTACGTAAGCACACTTACTTAGACGAACTTCACCAAAGTAGACGAAACGCCGGGTTATACGGTTCGGATCGGAAACGAAACCGTTCATTATCCGGTTCGGATACTGACCCGGAAACCGCTCGTGAACTTCTATTCGAAAAAGCCGTTACTCCAAGCGATGTGGGAAAATTGAACCGTTTAGTCATACCAAAACAACACGCTGAAAAAAATTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCCAAAGGTCTCTTGTTGAACTTCGAAGATGGAGGAGGTAAAGTTTGGCGGTTCAGGTACTCGTATTGGAACAGTAGCCAAAGCTATGTGCTGACCAAAGGATGGAGCCGGTTCGTGAAAGAAAAGAATTTGAAAGCCGGTGACATTGTTAGCTTCCTGAAATCGACCGGACAAGATAAAGATAAACAGCTTTACATTGAATGGAAGGCACGAAAGGCTTCTACTACAACCGGGTCGGACATGAACCCGGTTCAGACCTTCAGACTATTTGGAGTTGACATTATCAAAGTGTCGCCAAGTAGTGGGTGTAGTGAGAAGAGGAGGAGAGAATTGGAATTTCTCGCTTTGCAATGTACCAAAAAACAAAGGATTGTCGGAGCATTGTAA

Coding sequence (CDS)

ATGGACGGAATTTGCATTGACGAAAGCACTTCCACTGAATCTCAATCCCCGGTGGCTAAATCTCCGCCGCCGGAGACCAGTCTTTGCCGCGTCGGGAGTGGCGTCACTAGTGTAGTTCTCGATTCGGACTCCAGCGGCGGCGGAGTTGAGGCAGAGTCCCGGAAACTACCGTCGTCTCGTTTCAAAGGAGTGGTCCCACAGCCGAACGGCCGATGGGGGGCCCAGATTTACGAGAAACACCAAAGAGTATGGCTGGGAACGTTCAACGAAGAGGATGAAGCAGCACGTGCGTACGATGTGGCTGCCCAACGTTTCCGTGGCCGTGACGCCGTTACCAATTTCAAACCTTTATCACACCCTGGTGAAGAAGACGACGTCGTTTCCGCTTTCCTCAACTCCCATTCCAAGGCTGAGATCGTCGACATGCTACGTAAGCACACTTACTTAGACGAACTTCACCAAAGTAGACGAAACGCCGGGTTATACGGTTCGGATCGGAAACGAAACCGTTCATTATCCGGTTCGGATACTGACCCGGAAACCGCTCGTGAACTTCTATTCGAAAAAGCCGTTACTCCAAGCGATGTGGGAAAATTGAACCGTTTAGTCATACCAAAACAACACGCTGAAAAAAATTTCCCTCTCCAAACCGGTTCGACCGCTTCCTCCAAAGGTCTCTTGTTGAACTTCGAAGATGGAGGAGGTAAAGTTTGGCGGTTCAGGTACTCGTATTGGAACAGTAGCCAAAGCTATGTGCTGACCAAAGGATGGAGCCGGTTCGTGAAAGAAAAGAATTTGAAAGCCGGTGACATTGTTAGCTTCCTGAAATCGACCGGACAAGATAAAGATAAACAGCTTTACATTGAATGGAAGGCACGAAAGGCTTCTACTACAACCGGGTCGGACATGAACCCGGTTCAGACCTTCAGACTATTTGGAGTTGACATTATCAAAGTGTCGCCAAGTAGTGGGTGTAGTGAGAAGAGGAGGAGAGAATTGGAATTTCTCGCTTTGCAATGTACCAAAAAACAAAGGATTGTCGGAGCATTGTAA

Protein sequence

MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTTGSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL

Homology

[Close]

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-109
Identity = 224/367 (61.04%), Postives = 268/367 (73.02%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAK--SPPPETS--LCRVGSGVTSVVLDSDSSGGGVEAES 60
           MD  CIDE +S+ S+S     AK  SPPP  +  L R+GSG +SVVLD ++   G+E ES
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN---GLETES 60

Query: 61  RKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTN 120
           RKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV N
Sbjct: 61  RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVN 120

Query: 121 FKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDR--KRNRS 180
           FK +   G+      AFL +HSKAEIVDMLRKHTY DEL Q+ +       D   KRN S
Sbjct: 121 FKNVLEDGD-----LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGS 180

Query: 181 LSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFE 240
            +  +      RE+LFEKAVTPSDVGKLNRLVIPKQHAEK+FPL + S A +KG+L+NFE
Sbjct: 181 STTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFE 240

Query: 241 DGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWK 300
           D  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F +STG   ++QLYI+WK
Sbjct: 241 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG--LERQLYIDWK 300

Query: 301 ARKASTTTGSDMNPVQ-TFRLFGVDIIKVSP------SSGCSEKRRREL-EFLALQCTKK 351
            R     +G   NPVQ   RLFGVDI  V+        + C  KR R++ +  AL+C+KK
Sbjct: 301 VR-----SGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKK 352

[Close]

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-105
Identity = 224/364 (61.54%), Postives = 262/364 (71.98%), Query Frame = 0


Query: 1   MDGICIDESTS-------TESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAES 60
           M+   +DEST+       T + +P  KS     +L R+GSG +SVVLDS++   GVEAES
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKS--SVGNLYRMGSG-SSVVLDSEN---GVEAES 60

Query: 61  RKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTN 120
           RKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVA  RFR RDAVTN
Sbjct: 61  RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTN 120

Query: 121 FKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRR----NAGLYGSDRKRN 180
           FK +    +E D    FLNSHSK+EIVDMLRKHTY +EL QS+R    N  +  +     
Sbjct: 121 FKDVKMDEDEVD----FLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSG 180

Query: 181 RSLSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLN 240
            S  G  T    + E LFEKAVTPSDVGKLNRLVIPK HAEK+FPL + S  S KG+LLN
Sbjct: 181 LSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPS-SNVSVKGVLLN 240

Query: 241 FEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIE 300
           FED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF +S GQ  D+QLYI 
Sbjct: 241 FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQ--DQQLYIG 300

Query: 301 WKARKASTTTGSDMNPVQTFRLFGVDIIKVSPSSGCSE----KRRRELEFLALQCTKKQR 350
           WK+R     +GSD++  +  RLFGV+I   SP S  ++    KR  + E L+L C+KKQR
Sbjct: 301 WKSR-----SGSDLDAGRVLRLFGVNI---SPESSRNDVVGNKRVNDTEMLSLVCSKKQR 343

[Close]

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.8e-105
Identity = 223/381 (58.53%), Postives = 265/381 (69.55%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSP------------PPETS--LCRVGSGVTSVVLDSDSSG 60
           M+  C+D+S++T     ++ +P            PP TS  L R+GSG +SVVLDS++  
Sbjct: 1   MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSEN-- 60

Query: 61  GGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFR 120
            GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFR
Sbjct: 61  -GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFR 120

Query: 121 GRDAVTNFKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDR 180
           GRDAVTNFK      + +D  SAFL++HSKAEIVDMLRKHTY DE  QSRR       D 
Sbjct: 121 GRDAVTNFK---SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDG 180

Query: 181 KRN---RSLSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTA-- 240
           KR+    +  G+D     ARE+LFEK VTPSDVGKLNRLVIPKQHAEK+FPL   +TA  
Sbjct: 181 KRSGLETATYGNDA-VLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMG 240

Query: 241 ----SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS 300
                +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F +S
Sbjct: 241 MNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERS 300

Query: 301 TGQDKDKQLYIEWKARKASTTTGSDMNPVQT-FRLFGVDIIKVS---PSSGCSE----KR 351
           TG   D+QLYI WK R          +PVQT  RLFGV+I  VS   P+    E    KR
Sbjct: 301 TG--PDRQLYIHWKVRS---------SPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKR 360

[Close]

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 8.5e-100
Identity = 209/344 (60.76%), Postives = 245/344 (71.22%), Query Frame = 0


Query: 6   IDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSS-GGGVEAESRKLPSSRFKGV 65
           +DES++T    P  KS  P + L R+GSG TSVVLDS++     VEAESRKLPSSRFKGV
Sbjct: 7   VDESSTTTDSIPARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGV 66

Query: 66  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHPGEED 125
           VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAA RFRGRDAVTNFK  +   E +
Sbjct: 67  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE 126

Query: 126 DVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDPETARE 185
                FLN+HSK+EIVDMLRKHTY +EL Q +RN    G +       S          E
Sbjct: 127 -----FLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTAE 186

Query: 186 LLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYS 245
           LLFEK VTPSDVGKLNRLVIPK  AEK+FPL  G +  S KG+LLNFED  GKVWRFRYS
Sbjct: 187 LLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYS 246

Query: 246 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTTGSDM 305
           YWNSSQSYVLTKGWSRFVKEK L AGD++SF +S   D+D++ +I WK++     +G D+
Sbjct: 247 YWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRS--NDQDQKFFIGWKSK-----SGLDL 306

Query: 306 NPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIV 348
              +  RLFGVDI   S ++    K   E+   +L+C KKQR++
Sbjct: 307 ETGRVMRLFGVDI---SLNAVVVVKETTEVLMSSLRC-KKQRVL 333

[Close]

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 7.2e-91
Identity = 200/359 (55.71%), Postives = 231/359 (64.35%), Query Frame = 0


Query: 10  TSTESQSPVAKSPPPETSLCRVGSGVTSVV--------LDSDS-------SGGGVEAESR 69
           +ST+    +A +      L R+GSG ++VV         DS S        GGG      
Sbjct: 16  SSTDKLRALAAAAAETAPLERMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAGGAGG 75

Query: 70  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNF 129
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  ED+AARAYDVAAQRFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 130 KPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRN-AGLYGSDRKRNRSLS 189
           +PL+    +      FL + SKAE+VDMLRKHTY DEL QS+R  A    S      SLS
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 190 G-------SDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGST-ASSKG 249
                   S   P  AR+ LF+K VTPSDVGKLNRLVIPKQHAEK+FPLQ  S    SKG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 250 LLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ-DKDK 309
           +LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD+V F +S      D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 310 QLYIEWK------ARKASTTTGSDMNPVQTFRLFGVDII----KVSPSSGCSEKRRREL 334
           +L+I+ K      A  AS       +PV+  RLFGVD++     V   +GC  KR R+L
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAPAPVEQMAGC--KRARDL 372

[Close]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL
Match: A0A0A0KR17 (DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 326/351 (92.88%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDE+TSTES     KSPPP+TSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDETTSTES-----KSPPPDTSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL+H 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHG 120

Query: 121 PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDP 180
            GEEDD+VSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRK+NR LSGSD DP
Sbjct: 121 GGEEDDIVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKQNRFLSGSDDDP 180

Query: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240
           ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR
Sbjct: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240

Query: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTT 300
           FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARK STTT
Sbjct: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKPSTTT 300

Query: 301 GSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           GS +NPVQTFRLFGVDIIKVSP+SGCSEKRRRELEFL LQCTKKQR+VGAL
Sbjct: 301 GSAINPVQTFRLFGVDIIKVSPNSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

[Close]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL
Match: A0A5A7SZL8 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00730 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.0e-181
Identity = 326/351 (92.88%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDE+TSTES     KSPPP+ SLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDETTSTES-----KSPPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL+H 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHG 120

Query: 121 PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDP 180
            GEEDD+VSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRKRNR LSGSD +P
Sbjct: 121 GGEEDDIVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEP 180

Query: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240
           ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR
Sbjct: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240

Query: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTT 300
           FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARKASTTT
Sbjct: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKASTTT 300

Query: 301 GSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           GS +NPVQTFRLFGVDIIK SP+SGCSEKRRRELEFL LQCTKKQRIVGAL
Sbjct: 301 GSAINPVQTFRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL
Match: A0A1S3BG02 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo OX=3656 GN=LOC103489254 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.0e-181
Identity = 326/351 (92.88%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDE+TSTES     KSPPP+ SLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDETTSTES-----KSPPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL+H 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHG 120

Query: 121 PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDP 180
            GEEDD+VSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRKRNR LSGSD +P
Sbjct: 121 GGEEDDIVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEP 180

Query: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240
           ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR
Sbjct: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240

Query: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTT 300
           FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARKASTTT
Sbjct: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKASTTT 300

Query: 301 GSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           GS +NPVQTFRLFGVDIIK SP+SGCSEKRRRELEFL LQCTKKQRIVGAL
Sbjct: 301 GSAINPVQTFRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL
Match: A0A6J1GYA6 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita moschata OX=3662 GN=LOC111458585 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.3e-161
Identity = 304/354 (85.88%), Postives = 317/354 (89.55%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLP 60
           MDGICID++TSTESQS   P+ KSPPPETSLCRVGSG TSVVLDSDS   GVEAESRKLP
Sbjct: 1   MDGICIDQTTSTESQSTNFPLLKSPPPETSLCRVGSGFTSVVLDSDSC--GVEAESRKLP 60

Query: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL 120
           SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK  
Sbjct: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK-- 120

Query: 121 SHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDT 180
               ++DD VSAFLNSHSKAEIVDMLRKHTYL ELHQS+RNAGL G DRK NRSLSG D+
Sbjct: 121 --DEDDDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDS 180

Query: 181 DPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240
           D   ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV
Sbjct: 181 D---ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKAST 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS GQ  DKQLYIEWK+RKAS 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSPGQ--DKQLYIEWKSRKASP 300

Query: 301 TTGSDMNPVQTFRLFGVDIIKV-SPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           TT  +MNPV   RLFGVDI+K  SP++GC EK RRELEFLA QCTKKQRIVGAL
Sbjct: 301 TTDPNMNPVHIVRLFGVDIVKASSPNTGCGEK-RRELEFLAFQCTKKQRIVGAL 342

[Close]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL
Match: A0A6J1J5K4 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111481531 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.6e-160
Identity = 303/354 (85.59%), Postives = 315/354 (88.98%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICID++TST   SP  KSPPPETSLCRVGSG TSVVLDSDS   GVEAESRKLPSSR
Sbjct: 1   MDGICIDQTTST--NSPPLKSPPPETSLCRVGSGFTSVVLDSDSC--GVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK     
Sbjct: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKEEEEE 120

Query: 121 --PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDT 180
               ++DD VSAFLNSHSKAEIVDMLRKHTYL ELHQS+RNAGL G DRK NRSLSGSD+
Sbjct: 121 EDDDDDDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGSDS 180

Query: 181 DPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240
           D   ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV
Sbjct: 181 D---ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKAST 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS GQ  DKQLYIEWK+RKAS 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSPGQ--DKQLYIEWKSRKASP 300

Query: 301 TTGSDMNPVQTFRLFGVDIIKV-SPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           TT S+MNPV   RLFGVDI+K  SP++GC EK RRELEFLA QCTKKQRIVGAL
Sbjct: 301 TTDSNMNPVHIVRLFGVDIVKASSPNTGCGEK-RRELEFLAFQCTKKQRIVGAL 344

[Close]

BLAST of Lsi04G002880 vs. NCBI nr
Match: XP_038893206.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Benincasa hispida])

HSP 1 Score: 652.9 bits (1683), Expect = 1.6e-183
Identity = 329/350 (94.00%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDES STESQSPV KSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDESASTESQSPVVKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHP 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHG 120

Query: 121 GEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDPE 180
           GEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRKRN  LSGS  +PE
Sbjct: 121 GEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRNLLLSGSGNEPE 180

Query: 181 TARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRF 240
            ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRF
Sbjct: 181 AARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWRF 240

Query: 241 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTTG 300
           RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARKAS TTG
Sbjct: 241 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKASITTG 300

Query: 301 SDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           SDMNPVQT RLFGVDIIKVSP+S C+EKRR ELEFLALQCTKKQR+VGAL
Sbjct: 301 SDMNPVQTVRLFGVDIIKVSPNSVCNEKRRIELEFLALQCTKKQRVVGAL 348

[Close]

BLAST of Lsi04G002880 vs. NCBI nr
Match: XP_004135113.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2 [Cucumis sativus] >KGN52050.1 hypothetical protein Csa_007884 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 5.6e-181
Identity = 326/351 (92.88%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDE+TSTES     KSPPP+TSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDETTSTES-----KSPPPDTSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL+H 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHG 120

Query: 121 PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDP 180
            GEEDD+VSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRK+NR LSGSD DP
Sbjct: 121 GGEEDDIVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKQNRFLSGSDDDP 180

Query: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240
           ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR
Sbjct: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240

Query: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTT 300
           FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARK STTT
Sbjct: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKPSTTT 300

Query: 301 GSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           GS +NPVQTFRLFGVDIIKVSP+SGCSEKRRRELEFL LQCTKKQR+VGAL
Sbjct: 301 GSAINPVQTFRLFGVDIIKVSPNSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

[Close]

BLAST of Lsi04G002880 vs. NCBI nr
Match: XP_008446558.1 (PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucumis melo] >KAA0034529.1 AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucumis melo var. makuwa] >TYK09083.1 AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucumis melo var. makuwa])

HSP 1 Score: 643.3 bits (1658), Expect = 1.2e-180
Identity = 326/351 (92.88%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60
           MDGICIDE+TSTES     KSPPP+ SLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR
Sbjct: 1   MDGICIDETTSTES-----KSPPPDNSLCRVGSGVTSVVLDSDSSGGGVEAESRKLPSSR 60

Query: 61  FKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSH- 120
           +KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL+H 
Sbjct: 61  YKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHG 120

Query: 121 PGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDP 180
            GEEDD+VSAFLNSHSKAEIVDMLRKHTYLDELHQS+RNAGL GSDRKRNR LSGSD +P
Sbjct: 121 GGEEDDIVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRNRLLSGSDDEP 180

Query: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240
           ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR
Sbjct: 181 ETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKVWR 240

Query: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTT 300
           FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ  DKQLYIEWKARKASTTT
Sbjct: 241 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQ--DKQLYIEWKARKASTTT 300

Query: 301 GSDMNPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           GS +NPVQTFRLFGVDIIK SP+SGCSEKRRRELEFL LQCTKKQRIVGAL
Sbjct: 301 GSAINPVQTFRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Lsi04G002880 vs. NCBI nr
Match: XP_022957101.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita moschata])

HSP 1 Score: 577.0 bits (1486), Expect = 1.1e-160
Identity = 304/354 (85.88%), Postives = 317/354 (89.55%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLP 60
           MDGICID++TSTESQS   P+ KSPPPETSLCRVGSG TSVVLDSDS   GVEAESRKLP
Sbjct: 1   MDGICIDQTTSTESQSTNFPLLKSPPPETSLCRVGSGFTSVVLDSDSC--GVEAESRKLP 60

Query: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL 120
           SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK  
Sbjct: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFK-- 120

Query: 121 SHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDT 180
               ++DD VSAFLNSHSKAEIVDMLRKHTYL ELHQS+RNAGL G DRK NRSLSG D+
Sbjct: 121 --DEDDDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDS 180

Query: 181 DPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240
           D   ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV
Sbjct: 181 D---ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKAST 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS GQ  DKQLYIEWK+RKAS 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSPGQ--DKQLYIEWKSRKASP 300

Query: 301 TTGSDMNPVQTFRLFGVDIIKV-SPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           TT  +MNPV   RLFGVDI+K  SP++GC EK RRELEFLA QCTKKQRIVGAL
Sbjct: 301 TTDPNMNPVHIVRLFGVDIVKASSPNTGCGEK-RRELEFLAFQCTKKQRIVGAL 342

[Close]

BLAST of Lsi04G002880 vs. NCBI nr
Match: KAG6601301.1 (AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 576.2 bits (1484), Expect = 1.9e-160
Identity = 303/354 (85.59%), Postives = 317/354 (89.55%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAESRKLP 60
           MDGICID++TSTESQS   P+ KSPPPETSLCRVGSG TSVVLDSDS   GVEAESRKLP
Sbjct: 1   MDGICIDQTTSTESQSTNFPLLKSPPPETSLCRVGSGFTSVVLDSDSC--GVEAESRKLP 60

Query: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPL 120
           SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYDVAAQRFRGRDAVTNFK  
Sbjct: 61  SSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDVAAQRFRGRDAVTNFKD- 120

Query: 121 SHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDT 180
               ++DD VSAFLNSHSKAEIVDMLRKHTYL ELHQS+RNAGL G DRK NRSLSG D+
Sbjct: 121 EDDDDDDDDVSAFLNSHSKAEIVDMLRKHTYLHELHQSKRNAGLSGLDRKHNRSLSGLDS 180

Query: 181 DPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240
           D   ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV
Sbjct: 181 D---ARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFEDGGGKV 240

Query: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKAST 300
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS GQ  DKQLYIEWK+RKAS 
Sbjct: 241 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSPGQ--DKQLYIEWKSRKASP 300

Query: 301 TTGSDMNPVQTFRLFGVDIIKV-SPSSGCSEKRRRELEFLALQCTKKQRIVGAL 351
           TT  ++NPV   RLFGVDI+K  SP++GC EK RRELEFLA QCTKKQRIVGAL
Sbjct: 301 TTDPNINPVHIVRLFGVDIVKASSPNTGCGEK-RRELEFLAFQCTKKQRIVGAL 345

[Close]

BLAST of Lsi04G002880 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.1e-110
Identity = 224/367 (61.04%), Postives = 268/367 (73.02%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAK--SPPPETS--LCRVGSGVTSVVLDSDSSGGGVEAES 60
           MD  CIDE +S+ S+S     AK  SPPP  +  L R+GSG +SVVLD ++   G+E ES
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN---GLETES 60

Query: 61  RKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTN 120
           RKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV N
Sbjct: 61  RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVN 120

Query: 121 FKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDR--KRNRS 180
           FK +   G+      AFL +HSKAEIVDMLRKHTY DEL Q+ +       D   KRN S
Sbjct: 121 FKNVLEDGD-----LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGS 180

Query: 181 LSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFE 240
            +  +      RE+LFEKAVTPSDVGKLNRLVIPKQHAEK+FPL + S A +KG+L+NFE
Sbjct: 181 STTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFE 240

Query: 241 DGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWK 300
           D  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F +STG   ++QLYI+WK
Sbjct: 241 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG--LERQLYIDWK 300

Query: 301 ARKASTTTGSDMNPVQ-TFRLFGVDIIKVSP------SSGCSEKRRREL-EFLALQCTKK 351
            R     +G   NPVQ   RLFGVDI  V+        + C  KR R++ +  AL+C+KK
Sbjct: 301 VR-----SGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKK 352

[Close]

BLAST of Lsi04G002880 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 397.5 bits (1020), Expect = 1.1e-110
Identity = 224/367 (61.04%), Postives = 268/367 (73.02%), Query Frame = 0


Query: 1   MDGICIDESTSTESQS---PVAK--SPPPETS--LCRVGSGVTSVVLDSDSSGGGVEAES 60
           MD  CIDE +S+ S+S     AK  SPPP  +  L R+GSG +SVVLD ++   G+E ES
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN---GLETES 60

Query: 61  RKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTN 120
           RKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV N
Sbjct: 61  RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVN 120

Query: 121 FKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDR--KRNRS 180
           FK +   G+      AFL +HSKAEIVDMLRKHTY DEL Q+ +       D   KRN S
Sbjct: 121 FKNVLEDGD-----LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGS 180

Query: 181 LSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLNFE 240
            +  +      RE+LFEKAVTPSDVGKLNRLVIPKQHAEK+FPL + S A +KG+L+NFE
Sbjct: 181 STTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFE 240

Query: 241 DGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWK 300
           D  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F +STG   ++QLYI+WK
Sbjct: 241 DVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG--LERQLYIDWK 300

Query: 301 ARKASTTTGSDMNPVQ-TFRLFGVDIIKVSP------SSGCSEKRRREL-EFLALQCTKK 351
            R     +G   NPVQ   RLFGVDI  V+        + C  KR R++ +  AL+C+KK
Sbjct: 301 VR-----SGPRENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKK 352

[Close]

BLAST of Lsi04G002880 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-106
Identity = 224/364 (61.54%), Postives = 262/364 (71.98%), Query Frame = 0


Query: 1   MDGICIDESTS-------TESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSSGGGVEAES 60
           M+   +DEST+       T + +P  KS     +L R+GSG +SVVLDS++   GVEAES
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKS--SVGNLYRMGSG-SSVVLDSEN---GVEAES 60

Query: 61  RKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTN 120
           RKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVA  RFR RDAVTN
Sbjct: 61  RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTN 120

Query: 121 FKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRR----NAGLYGSDRKRN 180
           FK +    +E D    FLNSHSK+EIVDMLRKHTY +EL QS+R    N  +  +     
Sbjct: 121 FKDVKMDEDEVD----FLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSG 180

Query: 181 RSLSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLLLN 240
            S  G  T    + E LFEKAVTPSDVGKLNRLVIPK HAEK+FPL + S  S KG+LLN
Sbjct: 181 LSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPS-SNVSVKGVLLN 240

Query: 241 FEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIE 300
           FED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF +S GQ  D+QLYI 
Sbjct: 241 FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQ--DQQLYIG 300

Query: 301 WKARKASTTTGSDMNPVQTFRLFGVDIIKVSPSSGCSE----KRRRELEFLALQCTKKQR 350
           WK+R     +GSD++  +  RLFGV+I   SP S  ++    KR  + E L+L C+KKQR
Sbjct: 301 WKSR-----SGSDLDAGRVLRLFGVNI---SPESSRNDVVGNKRVNDTEMLSLVCSKKQR 343

[Close]

BLAST of Lsi04G002880 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 381.7 bits (979), Expect = 6.3e-106
Identity = 223/381 (58.53%), Postives = 265/381 (69.55%), Query Frame = 0


Query: 1   MDGICIDESTSTESQSPVAKSP------------PPETS--LCRVGSGVTSVVLDSDSSG 60
           M+  C+D+S++T     ++ +P            PP TS  L R+GSG +SVVLDS++  
Sbjct: 1   MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSEN-- 60

Query: 61  GGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFR 120
            GVE ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFR
Sbjct: 61  -GVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFR 120

Query: 121 GRDAVTNFKPLSHPGEEDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDR 180
           GRDAVTNFK      + +D  SAFL++HSKAEIVDMLRKHTY DE  QSRR       D 
Sbjct: 121 GRDAVTNFK---SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDG 180

Query: 181 KRN---RSLSGSDTDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTA-- 240
           KR+    +  G+D     ARE+LFEK VTPSDVGKLNRLVIPKQHAEK+FPL   +TA  
Sbjct: 181 KRSGLETATYGNDA-VLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMG 240

Query: 241 ----SSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKS 300
                +KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F +S
Sbjct: 241 MNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERS 300

Query: 301 TGQDKDKQLYIEWKARKASTTTGSDMNPVQT-FRLFGVDIIKVS---PSSGCSE----KR 351
           TG   D+QLYI WK R          +PVQT  RLFGV+I  VS   P+    E    KR
Sbjct: 301 TG--PDRQLYIHWKVRS---------SPVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKR 360

[Close]

BLAST of Lsi04G002880 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 365.2 bits (936), Expect = 6.1e-101
Identity = 209/344 (60.76%), Postives = 245/344 (71.22%), Query Frame = 0


Query: 6   IDESTSTESQSPVAKSPPPETSLCRVGSGVTSVVLDSDSS-GGGVEAESRKLPSSRFKGV 65
           +DES++T    P  KS  P + L R+GSG TSVVLDS++     VEAESRKLPSSRFKGV
Sbjct: 7   VDESSTTTDSIPARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGV 66

Query: 66  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHPGEED 125
           VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAA RFRGRDAVTNFK  +   E +
Sbjct: 67  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEEVE 126

Query: 126 DVVSAFLNSHSKAEIVDMLRKHTYLDELHQSRRNAGLYGSDRKRNRSLSGSDTDPETARE 185
                FLN+HSK+EIVDMLRKHTY +EL Q +RN    G +       S          E
Sbjct: 127 -----FLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGFKTAE 186

Query: 186 LLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTG-STASSKGLLLNFEDGGGKVWRFRYS 245
           LLFEK VTPSDVGKLNRLVIPK  AEK+FPL  G +  S KG+LLNFED  GKVWRFRYS
Sbjct: 187 LLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYS 246

Query: 246 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKDKQLYIEWKARKASTTTGSDM 305
           YWNSSQSYVLTKGWSRFVKEK L AGD++SF +S   D+D++ +I WK++     +G D+
Sbjct: 247 YWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRS--NDQDQKFFIGWKSK-----SGLDL 306

Query: 306 NPVQTFRLFGVDIIKVSPSSGCSEKRRRELEFLALQCTKKQRIV 348
              +  RLFGVDI   S ++    K   E+   +L+C KKQR++
Sbjct: 307 ETGRVMRLFGVDI---SLNAVVVVKETTEVLMSSLRC-KKQRVL 333

The following BLAST results are available for this feature:

BLAST of Lsi04G002880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82280	1.6e-109	61.04	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9ZWM9	1.8e-105	61.54	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q9C6M5	8.8e-105	58.53	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	8.5e-100	60.76	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q8RZX9	7.2e-91	55.71	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Lsi04G002880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR17	2.7e-181	92.88	DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1	[more]
A0A5A7SZL8	6.0e-181	92.88	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A1S3BG02	6.0e-181	92.88	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A6J1GYA6	5.3e-161	85.88	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A6J1J5K4	2.6e-160	85.59	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]

BLAST of Lsi04G002880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893206.1	1.6e-183	94.00	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Benincasa hi...	[more]
XP_004135113.1	5.6e-181	92.88	AP2/ERF and B3 domain-containing transcription repressor RAV2 [Cucumis sativus] ...	[more]
XP_008446558.1	1.2e-180	92.88	PREDICTED: AP2/ERF and B3 domain-containing transcription repressor RAV2-like [C...	[more]
XP_022957101.1	1.1e-160	85.88	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita mo...	[more]
KAG6601301.1	1.9e-160	85.59	AP2/ERF and B3 domain-containing transcription factor RAV1, partial [Cucurbita a...	[more]

BLAST of Lsi04G002880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68840.1	1.1e-110	61.04	related to ABI3/VP1 2	[more]
AT1G68840.2	1.1e-110	61.04	related to ABI3/VP1 2	[more]
AT1G13260.1	1.3e-106	61.54	related to ABI3/VP1 1	[more]
AT1G25560.1	6.3e-106	58.53	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	6.1e-101	60.76	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 187..294 e-value: 1.2E-21 score: 87.9
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 187..290 e-value: 1.3E-27 score: 95.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 187..294 score: 14.141634
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 186..274 e-value: 5.9529E-28 score: 103.176
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 60..121 e-value: 1.5E-29 score: 114.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 59..107 e-value: 3.9E-9 score: 36.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 60..115 score: 20.059746
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 59..114 e-value: 1.07135E-25 score: 95.8014
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 174..304 e-value: 6.8E-45 score: 153.6
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 185..276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 59..116 e-value: 3.3E-20 score: 74.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..174
None	No IPR available	PANTHER	PTHR31140:SF115	PROTEIN RAV1, PUTATIVE-RELATED	coord: 1..350
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 1..350
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 59..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G002880.1	Lsi04G002880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity