Lsi04G002710 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G002710
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Aluminum-activated malate transporter
Location	chr04: 2769532 .. 2774510 (+)
RNA-Seq Expression	Lsi04G002710
Synteny	Lsi04G002710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCGGTGACAATGTCAAATGTCGTTGTTTCCGTACAGTTTTCCGATGTGGTCACCAACTTATGGAAATGCTTACAAGATACTACCGTCAAGTTGTACGAAATGGGCCGCTCCGATCCCTGCAAGTTCTTCTTCGCCGCGAAGATGGGGCTGTCACTTGCACTTGCTTCGCTCGTCATTTTTTTTAGACGGCCTTTGAAAGAAGTAGGCCAGTATTCAATCTGGGCTATTCTCACCGTCGTCGTCGTTTTCGAGTTCAGCGTTGGTATGGCTAATGATTTTTTCGTTCCCCCAATTTGCATCCAGTTGGGGATTTTTGAGGTTTTTTTGTATCAATTTCTTCTTTTAAGGGAGTAATTGTGTTAATTTCTGTAGGGACAACGTTGAGTAAAGGGTTTAATCGTGCATTGGGAACATTTTCAGCCGGTGGACTTGCTCTTGGTATTGCAGAGCTATCTGTCTTAGCCGGGGCGTTTAAAGAAGTTATAATCGTAATCAGTATATTCCTTGCAGGTATGAGTTCTTAGCAGCAATAATTAATATGTGTAGTAGGAGATTATGATACGACGGATTCTTGAATTAAAAATTCCATTTCATTACTTTAGGATTTTTTGCAAGCTATTGCAAATTGTATCCGCCGATGAAGACATATGAATATAAATTCTATTTAGCATCCTTTATAAATCTCAAATGAACTTAATATTCAACATATATTAGTGTATATATCATAAAACAAAAAGTCCCAATAAAAAATTTAAGATACATATCACAGTATATATAAAAAAATCACTTTATATATCGAAAATGATTATATATTTGCAAATATTCTAACTAATATATGAAATATACTAGTAAGATTGACTAAATTCCATTTAAGTAAATTTAACCGAAGCTTTCTAATGATTTTCAAATAAACAAAACTATCTATCATGGTATATAAATCTCAAATGAACTTAATATTCAACATATATAAGTGTATACATCATAAAACAGAAAGTATCAATAAAAAATTGAAGATATATATCATAGTATATATCGAAAAATCACCTTATATATAAAAAACAAATATATATATTTATATATCGAAAAAACATAAAAGTACATATAAATCCACGACGGCGGTGGCAATTGGTGACAGTGCGAGATCTTGGCGGCGCGTAAGTTGGAGTGAGATCGGAGAAGTTTGGTCGGAAAAAATTTAGAAAAAAAACTCACCGTCGGTTGAAACTTGAACGGCGACCACGACGGCGGCCGAAACTTCAATGGCGGGAACGGCGAACGACGTGTTGAACGATGGAAATGACGTCGTCGACGGTAGTTGGGCGGTCCGAGGGAGGGAGGCAGCCGCCAGAAAGATGAGAGAGAGTAGTGTCTTGAGGGAGAGATTGAAGAAGATGAAATGGCTAGAGTTTTGAGAGAGATGGAAGAGATTGAAGATACACGAATTTGTAGGCTATGCATGAGGGAGGGATACACAAAAACCTAGGTTTGTTTATTTATTTATATATAAAAAATGTAGGTGAGGGTTAAATTGTAAATAAGTATTGATATTAGTGAAAATATTAAAGCAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTTTTTTTTTTTTTTTTTTTTGTAAAAATTGGATGTTTTAGACAACAACGTAAAATGTGTCATATCTTAAGGCTATCTATGTTGAAAACCCCTGTGATTTTTGCTGGCAGATACGCGATTGATGGGCCGACCCCTAAAATTTTAGAGATTTTGATCATCTTTGGGCCCTATATTTCAAAAATGTCTTTAAATTTGAATTTTTTTCAATAAAGACTTTTAGTGTTATTTTTGGACAAATTTACCATTTTTTATTTTTTTTATGTCCGAATTTTATATGTATTTTTCCTATTTTCAAAGTTCTTTTAATGATGGAGAGAGAAAGTGAATTTATGATGGAGAGAAAAAATGCATTTAATATATGATTTTCTTCTCATTTTCAATTGGAGAGAAAAAATTTTTAATATTATTTTTCATATTTTCAAAGTTTCCTTAATCATGGGGAGGGAAAGTGAATTTATGATGAAAAAATAAGATACGTTTAATATGATTTTCTTCTCATTTTCAATTGGATTGAAAATATTTTTAATATTTTTTTTCATTCTCAATTGGAGAAAGAAAATGTATTTAATATTTTTTTTATTTTCCTTTTCACGTATTAATCATTTCTTTGATATTGTTTATTGTTATTTAACGTTTGCTTTTTGATATTTTGTGATATATTCCACCGTTTATTTTGAGTTCTATTTGTTTTCATGTAATATTCCATTGTTTATTTAGTATATATATGAGGTATTCTGATATGTATGCACTCCTAGTTAAGCAACGCTTATGTGTGCTTGTAATGTATTCACTGAATGTCTGATATGTATGTCACTCTAATGCAATTTTTATATGATGGTTTGTCTTATTTGAGTTTATCTATTATAGTTCCTTGTGTTATTTTGAGTTCATTTGTATTTTGCGTTATTGTCTCATATATACTATAGTTTAGATTCTATCTAACATGATTTATAAATCTCAAATGAACTTAATGTTCAACATATATTCGTGTATATATCATCAAACAGAAAAGTCTCAATAAAAAATTGAAGATATATATCACAGTATATATGGAAAAACCACTGTATATATCGAAAATGATTATATACTTGCAAAGGTTCTAACTAATATATGAAATATACTAGTAAGATTGACTAAATTTCATTTAAGTAAATTTAACCAAAGCTCCCTAATAATTTTCAAATAAACAAAGCTATATATCAGGGTATATAAATCTAAAATGAACTTAATATTCAACATATATTAGTGTATATATCATAAAACAAAAAGTATCAATAAAAACCGAAGATATATATCACATTATATATCGAAAAATCCCCTATATATCAATAACAAATATATATATATTTATATATTGAAAAAACATAAAAGTACATCTAAATCCACGACGGCGGCGGCGATTGGTGACAGGTGCGAGATCTTGGCGGTGCGCGAGTTAGAGTGAGATCGAAGAAGTTTGACTGGAAAAAATCAAGAAAAAAACTCATCGTCGGCTGAAACTTGAACGGGCGGAACGACGACCGAAACTTGAACTGCGACCACGACGGCGCCCGAAACTTGAACGGCAACCACGACGGCGGCCAAAACTTCAACGGCGAGAACGGCGGACGACGTGTTGAACGATGGAAACGGCGTCGTCGATGGTGGTTGGGCGGTCCGAGGGAGGGAGGCGGCGGCTGGAAAGATGAGAGAGAGAGTGTCTTGAGGGAGAGATTGAAGATGGAAGGGTAAGAGTTTTGACAGAGAAATTGAAGAGATTGAAAATATGTATTAGAGAGGAATACACAAAAACCTAAGTTTATTTGTTTATTTATATATAAAAAATGTAGGTGAGGGTTAAGAAGATTTTTTTTTCTAAAAAATAGGATGTTTTAGATAACAACATAAAATGTGGCTTATTTAAAGGTTGAAAACTCAAAATTTTATAGTTCTGTTATTACATAATTCCAGATCGAGGAGCGTCAAAACAAAAGCCTCGATTGTCCTCGTTCTCTTCTCCTTGTGGTCTCTCCCTCTCTCTCTTTCTCTCCGACGACAGGTTCCTGAAGCTCAGCCAGCCAAGGGCATTGATCTAGGTGAGTCCGCTTTCAGTTTTCCACTTTCCTCTGCCATTTTTCTGTTTTTCCAATTCTCCATTCTTCGTTCGAGCAGCCTTTTGTTTAATCTGGATTTCAGTTTACTTCGTCGTTGATAGGAAGGGAATACTGAGATCGAATTCTCCGTGTCGCATACCTTAAGTTTCAAGGAACAAGACAATAATTCGACTGCGCTGTCCACGTTATGGATAGAGAATTTTGATTCTAACCTTTATAGCTGCATAACACCGTTCTTAGGGTTCGGACCTTTGAATCTGGGTTATTTCCTTCACTGTTTGGACGTTTTTACCGTTTGTCTATGGTTCTTTAGCCTTATCCTATCTTGCCCTCAGATCTTCGATTGCGGATCTGATTTGTCCATCTCTACTTGTTACCTTTTCTTGGAAGTCGAGGATCATAAATCAACAACAAAGCATTCAAAATCTACAGTGCAATTAGTCTTTTCCATCTAGTTATTGGAGATCGTTTGGAGCATTGATTTTATCCACTTTTTTATTTTGAACGTCCGCAAGGCATTTTATCCATCTCTACGGGTAAAGTTGCGCTTGGGCACTGTTCTTTACGTCCGGGTTTTTAGTCCGTTTAGGGGACGGTGGGTCGTTTCTTCGTTCATATGCTACGTTTCATGA

mRNA sequence

ATGGCGCCGGTGACAATGTCAAATGTCGTTGTTTCCGTACAGTTTTCCGATGTGGTCACCAACTTATGGAAATGCTTACAAGATACTACCGTCAAGTTGTACGAAATGGGCCGCTCCGATCCCTGCAAGTTCTTCTTCGCCGCGAAGATGGGGCTGTCACTTGCACTTGCTTCGCTCGTCATTTTTTTTAGACGGCCTTTGAAAGAAGTAGGCCAGTATTCAATCTGGGCTATTCTCACCGTCGTCGTCGTTTTCGAGTTCAGCGTTGGGACAACGTTGAGTAAAGGGTTTAATCGTGCATTGGGAACATTTTCAGCCGGTGGACTTGCTCTTGGTATTGCAGAGCTATCTGTCTTAGCCGGGGCGTTTAAAGAAGTTATAATCGAAGGGAATACTGAGATCGAATTCTCCGTGTCGCATACCTTAAGTTTCAAGGAACAAGACAATAATTCGACTGCGCTGTCCACGTTATGGATAGAGAATTTTGATTCTAACCTTTATAGCTGCATAACACCGTTCTTAGGGTTCGGACCTTTGAATCTGGGTTATTTCCTTCACTGTTTGGACGTTTTTACCGTTTGTCTATGGTTCTTTAGCCTTATCCTATCTTGCCCTCAGATCTTCGATTGCGGATCTGATTTGTCCATCTCTACTTGTTACCTTTTCTTGGAATTATTGGAGATCGTTTGGAGCATTGATTTTATCCACTTTTTTATTTTGAACGTCCGCAAGGCATTTTATCCATCTCTACGGGTAAAGTTGCGCTTGGGCACTGTTCTTTACGTCCGGGTTTTTAGTCCGTTTAGGGGACGGTGGGTCGTTTCTTCGTTCATATGCTACGTTTCATGA

Coding sequence (CDS)

ATGGCGCCGGTGACAATGTCAAATGTCGTTGTTTCCGTACAGTTTTCCGATGTGGTCACCAACTTATGGAAATGCTTACAAGATACTACCGTCAAGTTGTACGAAATGGGCCGCTCCGATCCCTGCAAGTTCTTCTTCGCCGCGAAGATGGGGCTGTCACTTGCACTTGCTTCGCTCGTCATTTTTTTTAGACGGCCTTTGAAAGAAGTAGGCCAGTATTCAATCTGGGCTATTCTCACCGTCGTCGTCGTTTTCGAGTTCAGCGTTGGGACAACGTTGAGTAAAGGGTTTAATCGTGCATTGGGAACATTTTCAGCCGGTGGACTTGCTCTTGGTATTGCAGAGCTATCTGTCTTAGCCGGGGCGTTTAAAGAAGTTATAATCGAAGGGAATACTGAGATCGAATTCTCCGTGTCGCATACCTTAAGTTTCAAGGAACAAGACAATAATTCGACTGCGCTGTCCACGTTATGGATAGAGAATTTTGATTCTAACCTTTATAGCTGCATAACACCGTTCTTAGGGTTCGGACCTTTGAATCTGGGTTATTTCCTTCACTGTTTGGACGTTTTTACCGTTTGTCTATGGTTCTTTAGCCTTATCCTATCTTGCCCTCAGATCTTCGATTGCGGATCTGATTTGTCCATCTCTACTTGTTACCTTTTCTTGGAATTATTGGAGATCGTTTGGAGCATTGATTTTATCCACTTTTTTATTTTGAACGTCCGCAAGGCATTTTATCCATCTCTACGGGTAAAGTTGCGCTTGGGCACTGTTCTTTACGTCCGGGTTTTTAGTCCGTTTAGGGGACGGTGGGTCGTTTCTTCGTTCATATGCTACGTTTCATGA

Protein sequence

MAPVTMSNVVVSVQFSDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSIWAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVIIEGNTEIEFSVSHTLSFKEQDNNSTALSTLWIENFDSNLYSCITPFLGFGPLNLGYFLHCLDVFTVCLWFFSLILSCPQIFDCGSDLSISTCYLFLELLEIVWSIDFIHFFILNVRKAFYPSLRVKLRLGTVLYVRVFSPFRGRWVVSSFICYVS

Homology

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BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot
Match: Q9C6L8 (Aluminum-activated malate transporter 4 OS=Arabidopsis thaliana OX=3702 GN=ALMT4 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD +T  WK L D   KLYEMGRSD  K +F+ KMG++LAL S VI+ + PL++  +Y++
Sbjct: 40  SDGITASWKALYDIGAKLYEMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAV 99

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFE+S+G TL KGFNRA+GT SAGGLALGIA LSV AG F+E+II
Sbjct: 100 WAILTVVVVFEYSIGATLVKGFNRAIGTLSAGGLALGIARLSVSAGEFEELII 152

[Close]

BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot
Match: Q93Z29 (Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana OX=3702 GN=ALMT5 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 63/106 (59.43%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 23  WKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSIWAILTVV 82
           W+ L +   KLY +G SD  K +F+ KMG++LAL S VIF + PL++  ++++WAILTVV
Sbjct: 36  WRALYEAPAKLYALGHSDRRKLYFSIKMGIALALCSFVIFLKEPLQDASKFAVWAILTVV 95

Query: 83  VVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           ++FE+ VG TL KGFNRALGT  AGGLALG+A+LSVLAG F+EVII
Sbjct: 96  LIFEYYVGATLVKGFNRALGTMLAGGLALGVAQLSVLAGEFEEVII 141

[Close]

BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot
Match: Q9LS46 (Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana OX=3702 GN=ALMT9 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-28
Identity = 62/111 (55.86%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           S+ ++ ++   +D   K +EMG SDP K  F+AK+GL+L + +L+IF++ P  ++ +YS+
Sbjct: 60  SEKISGVYDDAKDVARKAWEMGVSDPRKIVFSAKIGLALTIVALLIFYQEPNPDLSRYSV 119

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEV 127
           WAILTVVVVFEF++G TLSKGFNRALGT SAGGLALG+AELS L G ++E+
Sbjct: 120 WAILTVVVVFEFTIGATLSKGFNRALGTLSAGGLALGMAELSTLFGDWEEI 170

[Close]

BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot
Match: Q9SHM1 (Aluminum-activated malate transporter 6 OS=Arabidopsis thaliana OX=3702 GN=ALMT6 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 25  CLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSIWAILTVVVV 84
           C +  T  L E+G SD  + FFA KMG++LAL S+VIF + PL +  +YS+W ILTVVVV
Sbjct: 22  CFRKIT-NLCELGHSDRRRIFFAVKMGMALALCSVVIFLKEPLHDASKYSVWGILTVVVV 81

Query: 85  FEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           FE+SVG TL KGFNRA+GT SAGGLALGIA LSVL+  F++ II
Sbjct: 82  FEYSVGATLVKGFNRAIGTVSAGGLALGIARLSVLSRDFEQTII 124

[Close]

BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot
Match: Q9LPQ8 (Putative aluminum-activated malate transporter 3 OS=Arabidopsis thaliana OX=3702 GN=ALMT3 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.6e-26
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 15  FSDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYS 74
           FSD +T + K L+D  V  +EMG +DP K  F+AKMGL+L L S++IFF+ P  E+  + 
Sbjct: 63  FSDKITGVVKKLKDVLVTAWEMGTADPRKMIFSAKMGLALTLTSILIFFKIPGLELSGHY 122

Query: 75  IWAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEV 127
           +WAILTVVV+FEFS+G T SKG NR LGT SAGGLALG++ +S + G + +V
Sbjct: 123 LWAILTVVVIFEFSIGATFSKGCNRGLGTLSAGGLALGMSWISEMTGNWADV 174

[Close]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL
Match: A0A5D3CD01 (Aluminum-activated malate transporter 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00840 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SDVVTNLWK   DTTVKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDVVTNLWKGFHDTTVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELSV AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSVSAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL
Match: A0A5A7SU96 (Aluminum-activated malate transporter 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005550 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SDVVTNLWK   DTTVKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDVVTNLWKGFHDTTVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELSV AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSVSAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL
Match: A0A1S3BG71 (aluminum-activated malate transporter 4 OS=Cucumis melo OX=3656 GN=LOC103489267 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.7e-46
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SDVVTNLWK   DTTVKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDVVTNLWKGFHDTTVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELSV AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSVSAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL
Match: A0A0A0KR29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608530 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 8.6e-45
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD VTNLWK  Q+T+VKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDAVTNLWKGCQNTSVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELS  AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSASAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL
Match: A0A6J1DAQ1 (aluminum-activated malate transporter 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018732 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.8e-43
Identity = 102/139 (73.38%), Postives = 111/139 (79.86%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD + N W  LQDTT KLY+MGRSDP KF FAAKMGLSL+LASLVIFFR PLK+VGQYSI
Sbjct: 50  SDAINNFWNGLQDTTGKLYQMGRSDPRKFLFAAKMGLSLSLASLVIFFREPLKDVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVIIEGNTEIE 135
           WAILTVVVVFEFSVG TL+KGFNRALGTFSAGGLALGIAELS  AGAFKEV+I  +  I 
Sbjct: 110 WAILTVVVVFEFSVGATLNKGFNRALGTFSAGGLALGIAELSSSAGAFKEVVIVISIFIA 169

Query: 136 FSVSHTLSFKEQDNNSTAL 155
               H L  K   N +T+L
Sbjct: 170 GEDLHKLVVKNFKNVATSL 188

[Close]

BLAST of Lsi04G002710 vs. NCBI nr
Match: XP_008446577.1 (PREDICTED: aluminum-activated malate transporter 4 [Cucumis melo] >TYK09094.1 aluminum-activated malate transporter 4 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-46
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SDVVTNLWK   DTTVKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDVVTNLWKGFHDTTVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELSV AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSVSAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. NCBI nr
Match: KAA0034540.1 (aluminum-activated malate transporter 4 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-46
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SDVVTNLWK   DTTVKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDVVTNLWKGFHDTTVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELSV AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSVSAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. NCBI nr
Match: XP_038892455.1 (aluminum-activated malate transporter 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-45
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD VTNLWK   DTT+KLYEMG SDP KFFFAAKMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDAVTNLWKGFHDTTIKLYEMGCSDPRKFFFAAKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRALGTFSAGGLALGIAELSV AG FKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRALGTFSAGGLALGIAELSVSAGPFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. NCBI nr
Match: XP_038892454.1 (aluminum-activated malate transporter 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-45
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD VTNLWK   DTT+KLYEMG SDP KFFFAAKMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDAVTNLWKGFHDTTIKLYEMGCSDPRKFFFAAKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRALGTFSAGGLALGIAELSV AG FKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRALGTFSAGGLALGIAELSVSAGPFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. NCBI nr
Match: XP_004135406.1 (aluminum-activated malate transporter 4 [Cucumis sativus] >KGN52065.1 hypothetical protein Csa_008995 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-44
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD VTNLWK  Q+T+VKLYEMGRSDP KFFFA KMGLSLALASLVIFFR+PLKEVGQYSI
Sbjct: 50  SDAVTNLWKGCQNTSVKLYEMGRSDPRKFFFAVKMGLSLALASLVIFFRQPLKEVGQYSI 109

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFEFSVG TLSKGFNRA+GT SAGGLALGIAELS  AGAFKEVII
Sbjct: 110 WAILTVVVVFEFSVGATLSKGFNRAIGTLSAGGLALGIAELSASAGAFKEVII 162

[Close]

BLAST of Lsi04G002710 vs. TAIR 10
Match: AT1G25480.1 (Aluminium activated malate transporter family protein )

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-34
Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           SD +T  WK L D   KLYEMGRSD  K +F+ KMG++LAL S VI+ + PL++  +Y++
Sbjct: 40  SDGITASWKALYDIGAKLYEMGRSDRRKVYFSVKMGMALALCSFVIYLKEPLRDASKYAV 99

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           WAILTVVVVFE+S+G TL KGFNRA+GT SAGGLALGIA LSV AG F+E+II
Sbjct: 100 WAILTVVVVFEYSIGATLVKGFNRAIGTLSAGGLALGIARLSVSAGEFEELII 152

[Close]

BLAST of Lsi04G002710 vs. TAIR 10
Match: AT1G68600.1 (Aluminium activated malate transporter family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-30
Identity = 63/106 (59.43%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 23  WKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSIWAILTVV 82
           W+ L +   KLY +G SD  K +F+ KMG++LAL S VIF + PL++  ++++WAILTVV
Sbjct: 36  WRALYEAPAKLYALGHSDRRKLYFSIKMGIALALCSFVIFLKEPLQDASKFAVWAILTVV 95

Query: 83  VVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           ++FE+ VG TL KGFNRALGT  AGGLALG+A+LSVLAG F+EVII
Sbjct: 96  LIFEYYVGATLVKGFNRALGTMLAGGLALGVAQLSVLAGEFEEVII 141

[Close]

BLAST of Lsi04G002710 vs. TAIR 10
Match: AT3G18440.1 (aluminum-activated malate transporter 9 )

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-29
Identity = 62/111 (55.86%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 16  SDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSI 75
           S+ ++ ++   +D   K +EMG SDP K  F+AK+GL+L + +L+IF++ P  ++ +YS+
Sbjct: 60  SEKISGVYDDAKDVARKAWEMGVSDPRKIVFSAKIGLALTIVALLIFYQEPNPDLSRYSV 119

Query: 76  WAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEV 127
           WAILTVVVVFEF++G TLSKGFNRALGT SAGGLALG+AELS L G ++E+
Sbjct: 120 WAILTVVVVFEFTIGATLSKGFNRALGTLSAGGLALGMAELSTLFGDWEEI 170

[Close]

BLAST of Lsi04G002710 vs. TAIR 10
Match: AT2G17470.1 (Aluminium activated malate transporter family protein )

HSP 1 Score: 121.7 bits (304), Expect = 9.4e-28
Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 25  CLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYSIWAILTVVVV 84
           C +  T  L E+G SD  + FFA KMG++LAL S+VIF + PL +  +YS+W ILTVVVV
Sbjct: 22  CFRKIT-NLCELGHSDRRRIFFAVKMGMALALCSVVIFLKEPLHDASKYSVWGILTVVVV 81

Query: 85  FEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEVII 129
           FE+SVG TL KGFNRA+GT SAGGLALGIA LSVL+  F++ II
Sbjct: 82  FEYSVGATLVKGFNRAIGTVSAGGLALGIARLSVLSRDFEQTII 124

[Close]

BLAST of Lsi04G002710 vs. TAIR 10
Match: AT1G18420.1 (Aluminium activated malate transporter family protein )

HSP 1 Score: 119.0 bits (297), Expect = 6.1e-27
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 15  FSDVVTNLWKCLQDTTVKLYEMGRSDPCKFFFAAKMGLSLALASLVIFFRRPLKEVGQYS 74
           FSD +T + K L+D  V  +EMG +DP K  F+AKMGL+L L S++IFF+ P  E+  + 
Sbjct: 63  FSDKITGVVKKLKDVLVTAWEMGTADPRKMIFSAKMGLALTLTSILIFFKIPGLELSGHY 122

Query: 75  IWAILTVVVVFEFSVGTTLSKGFNRALGTFSAGGLALGIAELSVLAGAFKEV 127
           +WAILTVVV+FEFS+G T SKG NR LGT SAGGLALG++ +S + G + +V
Sbjct: 123 LWAILTVVVIFEFSIGATFSKGCNRGLGTLSAGGLALGMSWISEMTGNWADV 174

The following BLAST results are available for this feature:

BLAST of Lsi04G002710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6L8	1.5e-33	63.72	Aluminum-activated malate transporter 4 OS=Arabidopsis thaliana OX=3702 GN=ALMT4...	[more]
Q93Z29	1.7e-29	59.43	Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana OX=3702 GN=ALMT5...	[more]
Q9LS46	5.4e-28	55.86	Aluminum-activated malate transporter 9 OS=Arabidopsis thaliana OX=3702 GN=ALMT9...	[more]
Q9SHM1	1.3e-26	61.54	Aluminum-activated malate transporter 6 OS=Arabidopsis thaliana OX=3702 GN=ALMT6...	[more]
Q9LPQ8	8.6e-26	54.46	Putative aluminum-activated malate transporter 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Lsi04G002710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD01	2.7e-46	91.15	Aluminum-activated malate transporter 4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SU96	2.7e-46	91.15	Aluminum-activated malate transporter 4 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BG71	2.7e-46	91.15	aluminum-activated malate transporter 4 OS=Cucumis melo OX=3656 GN=LOC103489267 ...	[more]
A0A0A0KR29	8.6e-45	88.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608530 PE=3 SV=1	[more]
A0A6J1DAQ1	2.8e-43	73.38	aluminum-activated malate transporter 4-like isoform X2 OS=Momordica charantia O...	[more]

BLAST of Lsi04G002710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446577.1	5.5e-46	91.15	PREDICTED: aluminum-activated malate transporter 4 [Cucumis melo] >TYK09094.1 al...	[more]
KAA0034540.1	5.5e-46	91.15	aluminum-activated malate transporter 4 [Cucumis melo var. makuwa]	[more]
XP_038892455.1	2.7e-45	90.27	aluminum-activated malate transporter 4 isoform X2 [Benincasa hispida]	[more]
XP_038892454.1	2.7e-45	90.27	aluminum-activated malate transporter 4 isoform X1 [Benincasa hispida]	[more]
XP_004135406.1	1.8e-44	88.50	aluminum-activated malate transporter 4 [Cucumis sativus] >KGN52065.1 hypothetic...	[more]

BLAST of Lsi04G002710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25480.1	1.0e-34	63.72	Aluminium activated malate transporter family protein	[more]
AT1G68600.1	1.2e-30	59.43	Aluminium activated malate transporter family protein	[more]
AT3G18440.1	3.8e-29	55.86	aluminum-activated malate transporter 9	[more]
AT2G17470.1	9.4e-28	61.54	Aluminium activated malate transporter family protein	[more]
AT1G18420.1	6.1e-27	54.46	Aluminium activated malate transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020966	Aluminum-activated malate transporter	PFAM	PF11744	ALMT	coord: 35..128 e-value: 2.3E-38 score: 132.3
None	No IPR available	PANTHER	PTHR31086:SF20	ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED	coord: 13..129
None	No IPR available	PANTHER	PTHR31086	ALUMINUM-ACTIVATED MALATE TRANSPORTER 10	coord: 13..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G002710.1	Lsi04G002710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0015743	malate transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane