Lsi04G002280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G002280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function (DUF1218)
Location	chr04: 2348394 .. 2349607 (-)
RNA-Seq Expression	Lsi04G002280
Synteny	Lsi04G002280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTACTTTTTGATACTACAAAGAAAATAAACCATAATGGAAAATATGATGGGTTACATGATATTTGAACATTGTCTAATCAATTTATCATGAATAATTTTAAAAAATAGAAAAATAAAAAAAATATATTTATACAAAATAACAAAAAAAAATTTAGATAGTTGTGATATGTTTAGGACTATTAGTGATAGAAATGATACAAGTGTATCAATGTCTATCCGTATTTTTTTTTACTATTTTTTATAAAAAAATTGACATTTTTTTTATTCGTATTTTCCATTTAGTAGAAATTTTGGTGATATGCTCTCAAAGCATTTCTTATTACCATTCATATTCAAACATTTTTTTTAATTCATAAACCAAGCACCGAAAATAACCTCCTATAGCCGGTGAGGCAACCGGAAAACAGGGACTTCGATACTCCAAATAACGGTCCCACTTCTAAAAAAAACAAAGCAAAAAAAGCAAAACTGTGTAATAAACTAAACCACTATAACAAAGAAAATACACCCAATGAAATATTGCCACGTATGCAGCCCAACTTTAAACCAAACTTATTGGTGATAATAATGAACACAGTAAAAACAAAAAGCAGAGAATCAAAACTCAGTAGTCAGAGTGGCCACTGAATCAAACCTCGGCAGCCATCCCAAGAAAGGCAAAAGCTCCAGCTCCGCCACATTCTTCAATACCAAAATCGCCAAATTTCCATAAAAAATCAGATTAAATTTCAAAATTTGAAGCCGCCCCAATTCTTTTTCTTCTTCTTCCTTCAAAAAAAGAGCAAAAAATGGCACTTTCAGCTATTGTTTTGGCCACCATCACTTCTCTCCATCTCATAGCCTTCGTCCTCGCCGTCGGCGCCGAGCGCCGCCGCAGCACCGTAAGTTTTTGAGCTTACTGATTCACTGACCCTCTTCATTAATCTCTGTAGATGAAAAGCTTTTATATTTCTTTGTACTCTGTGTTTTTGTGTTCTTTTTGTGAAGGCTAAGGTTGTGCCAGATGAGTACGATGAAAAGACTTATTGTGTGTACGGCACCGACGCATCGACGGTGTACGGATTATCGGCGTTCGGTTTACTTCTGATAAGCCAGGTGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAAGGTTTAATTAGTGGAAAAATCACCACTGTCGCCATTTTCTTCTTTGTCTTTTCTTGGTATGTATATCAAAATTGA

mRNA sequence

ATTTACTTTTTGATACTACAAAGAAAATAAACCATAATGGAAAATATGATGGGTTACATGATATTTGAACATTGTCTAATCAATTTATCATGAATAATTTTAAAAAATAGAAAAATAAAAAAAATATATTTATACAAAATAACAAAAAAAAATTTAGATAGTTGTGATATGTTTAGGACTATTAGTGATAGAAATGATACAAGTGTATCAATGTCTATCCGTATTTTTTTTTACTATTTTTTATAAAAAAATTGACATTTTTTTTATTCGTATTTTCCATTTAGTAGAAATTTTGGTGATATGCTCTCAAAGCATTTCTTATTACCATTCATATTCAAACATTTTTTTTAATTCATAAACCAAGCACCGAAAATAACCTCCTATAGCCGGTGAGGCAACCGGAAAACAGGGACTTCGATACTCCAAATAACGGTCCCACTTCTAAAAAAAACAAAGCAAAAAAAGCAAAACTGTGTAATAAACTAAACCACTATAACAAAGAAAATACACCCAATGAAATATTGCCACGTATGCAGCCCAACTTTAAACCAAACTTATTGGTGATAATAATGAACACAGTAAAAACAAAAAGCAGAGAATCAAAACTCAGTAGTCAGAGTGGCCACTGAATCAAACCTCGGCAGCCATCCCAAGAAAGGCAAAAGCTCCAGCTCCGCCACATTCTTCAATACCAAAATCGCCAAATTTCCATAAAAAATCAGATTAAATTTCAAAATTTGAAGCCGCCCCAATTCTTTTTCTTCTTCTTCCTTCAAAAAAAGAGCAAAAAATGGCACTTTCAGCTATTGTTTTGGCCACCATCACTTCTCTCCATCTCATAGCCTTCGTCCTCGCCGTCGGCGCCGAGCGCCGCCGCAGCACCGCTAAGGTTGTGCCAGATGAGTACGATGAAAAGACTTATTGTGTGTACGGCACCGACGCATCGACGGTGTACGGATTATCGGCGTTCGGTTTACTTCTGATAAGCCAGGTGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAAGGTTTAATTAGTGGAAAAATCACCACTGTCGCCATTTTCTTCTTTGTCTTTTCTTGGTATGTATATCAAAATTGA

Coding sequence (CDS)

ATGGCACTTTCAGCTATTGTTTTGGCCACCATCACTTCTCTCCATCTCATAGCCTTCGTCCTCGCCGTCGGCGCCGAGCGCCGCCGCAGCACCGCTAAGGTTGTGCCAGATGAGTACGATGAAAAGACTTATTGTGTGTACGGCACCGACGCATCGACGGTGTACGGATTATCGGCGTTCGGTTTACTTCTGATAAGCCAGGTGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAAGGTTTAATTAGTGGAAAAATCACCACTGTCGCCATTTTCTTCTTTGTCTTTTCTTGGTATGTATATCAAAATTGA

Protein sequence

MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAFGLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSWYVYQN

Homology

[Close]

BLAST of Lsi04G002280 vs. ExPASy TrEMBL
Match: A0A0A0KWH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610400 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MA+SAIVLATITSLHLIAFVLAVGAERRRSTA +VPDEYDEKTYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATITSLHLIAFVLAVGAERRRSTANIVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. ExPASy TrEMBL
Match: A0A6J1JG73 (uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. ExPASy TrEMBL
Match: A0A6J1GYZ6 (uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458800 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. ExPASy TrEMBL
Match: A0A5D3CD50 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001250 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MA+SAIVLATI SLHLIAFVLAVGAERRRSTA VVPDEYDEKTYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATIASLHLIAFVLAVGAERRRSTANVVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. ExPASy TrEMBL
Match: A0A1S3BF21 (uncharacterized protein LOC103489308 OS=Cucumis melo OX=3656 GN=LOC103489308 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 95/100 (95.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MA+SAIVLATI SLHLIAFVLAVGAERRRSTA VVPDEYDEKTYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATIASLHLIAFVLAVGAERRRSTANVVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. NCBI nr
Match: XP_038892755.1 (uncharacterized protein LOC120081728 [Benincasa hispida])

HSP 1 Score: 187.6 bits (475), Expect = 5.6e-44
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYC+YGTDASTVYGLSAF
Sbjct: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCLYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. NCBI nr
Match: XP_011655790.1 (uncharacterized protein LOC101216289 [Cucumis sativus] >KGN52106.1 hypothetical protein Csa_008183 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43
Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MA+SAIVLATITSLHLIAFVLAVGAERRRSTA +VPDEYDEKTYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATITSLHLIAFVLAVGAERRRSTANIVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. NCBI nr
Match: XP_022986328.1 (uncharacterized protein LOC111484079 [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 4.7e-43
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. NCBI nr
Match: XP_022957387.1 (uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063.1 hypothetical protein SDJN02_06106 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.5 bits (467), Expect = 4.7e-43
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. NCBI nr
Match: XP_023514518.1 (uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 4.7e-43
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSW 101
           GLLLISQ VVNGVTRCFCCGKGLISGK TTVAIFFFVFSW
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSW 100

[Close]

BLAST of Lsi04G002280 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 135.2 bits (339), Expect = 3.1e-32
Identity = 70/101 (69.31%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAF 60
           MA+S  +L  +T+LHL+AFV A GAERRRSTA  VPD+YDEKT C YGT+ASTVYG+SAF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISQVVVNGVTRCFCCGKGLISGKITTV-AIFFFVFSW 101
           GLLL+SQ VVNGVT+C C GKGL++G   TV AI FFV SW
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSW 101

[Close]

BLAST of Lsi04G002280 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAFGLL 63
           S +V+  +  L LIA  LA+ AE+RRS  KV  D   +  YCVYGTD +T YG  AF LL
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 64  LISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSWYVY 104
            +SQV++   +RCFCCGK L  G     AI  F+  W  +
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFF 102

[Close]

BLAST of Lsi04G002280 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAFGLL 63
           S IV A +   +LIAF LAV AE+RRSTA+VV D   +  YCVY +D +T YG+ AF   
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 64  LISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSWYVY 104
           + SQ+++  V+RCFCCGK L  G    +A+  F+ SW  +
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFF 102

[Close]

BLAST of Lsi04G002280 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 84.3 bits (207), Expect = 6.2e-17
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAFGLL 63
           S +V+  +  L LIA  LA+ AE+RRS  KVVPD   E  +C YG+D +T YG  AF LL
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 64  LISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSWYVY 104
            ISQV++   +RCFCCGK L  G      I  F+  W  +
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFF 102

[Close]

BLAST of Lsi04G002280 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 74.7 bits (182), Expect = 4.9e-14
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCVYGTDASTVYGLSAFGLL 63
           S +V   + +L L+AF  ++ AERRRS  K + D     T+CVY +D +T YG+ AF  L
Sbjct: 7   STLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFL 66

Query: 64  LISQVVVNGVTRCFCCGKGLISGKITTVAIFFFVFSWYVY 104
           L S+ ++  VT+C C G+ L  G     +I +F+ SW  +
Sbjct: 67  LSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTF 106

The following BLAST results are available for this feature:

BLAST of Lsi04G002280 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G002280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWH0	1.3e-43	95.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610400 PE=4 SV=1	[more]
A0A6J1JG73	2.3e-43	96.00	uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079...	[more]
A0A6J1GYZ6	2.3e-43	96.00	uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3CD50	3.9e-43	95.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BF21	3.9e-43	95.00	uncharacterized protein LOC103489308 OS=Cucumis melo OX=3656 GN=LOC103489308 PE=...	[more]

BLAST of Lsi04G002280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892755.1	5.6e-44	97.00	uncharacterized protein LOC120081728 [Benincasa hispida]	[more]
XP_011655790.1	2.8e-43	95.00	uncharacterized protein LOC101216289 [Cucumis sativus] >KGN52106.1 hypothetical ...	[more]
XP_022986328.1	4.7e-43	96.00	uncharacterized protein LOC111484079 [Cucurbita maxima]	[more]
XP_022957387.1	4.7e-43	96.00	uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063...	[more]
XP_023514518.1	4.7e-43	96.00	uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi04G002280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	3.1e-32	69.31	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	2.8e-17	46.00	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	2.8e-17	47.00	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	6.2e-17	46.00	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	4.9e-14	38.00	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..102 e-value: 2.7E-9 score: 37.4
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 3..102
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G002280.1	Lsi04G002280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane