Lsi04G002100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G002100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	sec-independent protein translocase protein TATC, chloroplastic
Location	chr04: 2215027 .. 2217605 (-)
RNA-Seq Expression	Lsi04G002100
Synteny	Lsi04G002100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCATCAGCGGTGCTCTAACATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAAATAGCCCAACGTCGAGAAGAACGAAGTTGCGATTCACCGGTTTGCTCAGCCGTAGGAATTTCAACAGATTTGTGTGTTCTGCTGTTGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGGTATTAGTATTGCCAAAACCTACGTTTCGTCTGAAAATCGGGCCCGGTTATCGTTTGTGAATACCCGAACAACTTTTGGAAGCTTTATGTCTTTATTACTATCGGATTAAGTAGTATTGGTTCTTAATTTTGTTTAGAATTTGCACTAGAAATTACTCGTGTTTAATAGAGATGTATGTTTTGGTTAGATTTTTAGATGAGCTTATGTGAGTTCAGGATTTGAAGGGCGAAGTTCATAAGTGGATTTGTTTGGATCCATTAACCAGGAGAGGAATGTCTTGCTCAACGTTGTTACTTCTGAAGTTGTGGATAAAACTTATTGGGACTCGACATGCTTTCAGATACTTCCCTTGTATTTAAATGTTCATTGCATATCTTATGTGGCTGCAGAAAGTTTATGCTATAATTGGTATACAAGTTCTTAATACCCCATCTTTTTCATGAAAAAATATTAGATATCACTGAGAATTCAACAAATGGGGCTCCGGAAAAAAGTGGTATATATGACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGCTGGATGCTTTGCATTTTCGAAAGAACTCATCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGTATGATGAAATTTTACATTGCTCGTATAATCACTTTTATTGACCTGTGGATTGTGAGCATGGTTACCATCCATTTAGATAGCTCATGATACGAAAATGGCTTATGATACAATCTTGAAAAATGAGATAAACAAGTTTGACTTTAACCTACTCGACTTTAACTTGGGTGGATCACTTGGGACTTTAACTTGGGTGGATCACTTGGGTCCATGGGTTGAATTTCTTTAAACAATTAAATTTTGTAGCAGTCTACTAGCTTCGACTTTCTGGTTTCCTGGTGATTTAACATGAAATTGGAGAATTTACCTAGATGTTGAGAACATAGAAAAATACAGTGTATGATGTTATTTGAATTAGAACTCTTTGCTTATTCTATCAATCTTTCTGGTGTGTGTGTGTGTTGCGGAATACCAAACCACTAGATCCTATAAGACTTATGTGTCTCTCTAAGTCGATGGGTGATACCATGACTTCGAACTATGCTACATATTGTTTCTGATTTTTGTTCAATTTAAAAATTCATTCTACACTCGGTATATGCAGCTGTATATTTGCTCATGTTGGTAGGGGTCAATAACATTAAAATTCTCCTTATACGCTCCAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGACTGACAAGGACAGAAAGACAGTTTCTGGCACCAATCGTTCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCGTACATAGTTTTGACACCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTGTGTGTTTTATAAATAAATTGCCAATGATATCTTTAGGAATGTTGTCCATGCACTAGAAGAATCCTACCAATCACTTCTTAGGAACAATCTTAAATCATTTATGATGTCCAGCATGACACCAAATTTCACCCAATTGAGCTAAGCTTTTTGACAATATATATAAATTTCATCTTATTTGCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTAGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCTTATTTTTCCAGCTCCGTGGGGATTCTGTACATTCATAAAATTCTATGTTGTAGTGTAATTGTGACACCAGTTAATAGAAAGGAATATTCATTCCATGCATCTTTCTAAAATGACTTCGTTTGTCACTGTAAACATAGCGAATTCTTTTGATGAAGTACACAATAATGGATAGTTCTGTTTCTTACAATGACAAGAACTAGAGCTATAGTAACAAAACTGGATGTAAATATGGCTACCCACATACATCAAAAATAAGCATTTGATTA

mRNA sequence

ATGGGAAGCATCAGCGGTGCTCTAACATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAAATAGCCCAACGTCGAGAAGAACGAAGTTGCGATTCACCGGTTTGCTCAGCCGTAGGAATTTCAACAGATTTGTGTGTTCTGCTGTTGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGGTATTAGTATTGCCAAAACCTACGTTTCGTCTGAAAATCGGGCCCGAATTTGCACTAGAAATTACTCGTGTTTAATAGAGATGTATGTTTTGGAGAGGAATGTCTTGCTCAACGTTGTTACTTCTGAAGTTGTGGATAAAACTTATTGGGACTCGACATGCTTTCAGATACTTCCCTTGTATTTAAATGTTCATTGCATATCTTATGTGGCTGCAGAAAGTTTATGCTATAATTGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGCTGGATGCTTTGCATTTTCGAAAGAACTCATCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGACTGACAAGGACAGAAAGACAGTTTCTGGCACCAATCGTTCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCGTACATAGTTTTGACACCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTAGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCTTATTTTTCCAGCTCCGTGGGGATTCTGTACATTCATAAAATTCTATGTTGTAGTGTAATTGTGACACCAGTTAATAGAAAGGAATATTCATTCCATGCATCTTTCTAAAATGACTTCGTTTGTCACTGTAAACATAGCGAATTCTTTTGATGAAGTACACAATAATGGATAGTTCTGTTTCTTACAATGACAAGAACTAGAGCTATAGTAACAAAACTGGATGTAAATATGGCTACCCACATACATCAAAAATAAGCATTTGATTA

Coding sequence (CDS)

ATGGGAAGCATCAGCGGTGCTCTAACATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTGCTTCAGCTCGAAATAGCCCAACGTCGAGAAGAACGAAGTTGCGATTCACCGGTTTGCTCAGCCGTAGGAATTTCAACAGATTTGTGTGTTCTGCTGTTGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCATCGTTGAAGATGTGCCAGGTATTAGTATTGCCAAAACCTACGTTTCGTCTGAAAATCGGGCCCGAATTTGCACTAGAAATTACTCGTGTTTAATAGAGATGTATGTTTTGGAGAGGAATGTCTTGCTCAACGTTGTTACTTCTGAAGTTGTGGATAAAACTTATTGGGACTCGACATGCTTTCAGATACTTCCCTTGTATTTAAATGTTCATTGCATATCTTATGTGGCTGCAGAAAGTTTATGCTATAATTGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTGTCAGTTTTGGCGGTGGGAGCTGCAATTGCTGGATGCTTTGCATTTTCGAAAGAACTCATCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGACTGACAAGGACAGAAAGACAGTTTCTGGCACCAATCGTTCTAGGCTCCTCTATACTTTTCTATGCAGGAATTGCCTTCTCGTACATAGTTTTGACACCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTTGGACAACTTGGGCTTGTCTCAGGAGACCAAATGCTTTCTATTTGGAGATACGTTGTTGTAGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGGGGTGCTTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSAVDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNVLLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-114
Identity = 207/242 (85.54%), Postives = 230/242 (95.04%), Query Frame = 0


Query: 162 YNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGV 221
           Y  K+LLPDDKEMS+FDHLEELR+RIF+SVL VG +I GCFAFSK+L+ ILEAPVK +GV
Sbjct: 112 YPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILEAPVKSEGV 171

Query: 222 RFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSIL 281
           RFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+FL PIVLGSS+L
Sbjct: 172 RFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGPIVLGSSVL 231

Query: 282 FYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQIL 341
           FYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVP+IQ+L
Sbjct: 232 FYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLL 291

Query: 342 LGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLS 401
           LGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLLGLYLGGAW+VKL+
Sbjct: 292 LGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLA 351

Query: 402 GR 404
           GR
Sbjct: 352 GR 353

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BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.1e-114
Identity = 210/248 (84.68%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 156 AAESLCYNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAP 215
           A  +  Y  KDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAI GCFAFSK+L++ LEAP
Sbjct: 109 ALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEAP 168

Query: 216 VKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIV 275
           V  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL PIV
Sbjct: 169 VTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPIV 228

Query: 276 LGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQV 335
           LGSS+LFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLSFQV
Sbjct: 229 LGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQV 288

Query: 336 PVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGA 395
           PVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGA
Sbjct: 289 PVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGA 348

Query: 396 WVVKLSGR 404
           W+VK++GR
Sbjct: 349 WMVKITGR 356

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BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 412.1 bits (1058), Expect = 7.0e-114
Identity = 211/242 (87.19%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 162 YNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGV 221
           Y  K+ LPDDKEM++FDHLEELR+RIFVSVLAVGAAI GCFAFSK+LI+ LEAPVK QGV
Sbjct: 99  YPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGV 158

Query: 222 RFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSIL 281
           RFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+L
Sbjct: 159 RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLL 218

Query: 282 FYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQIL 341
           FYAG+AFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+L
Sbjct: 219 FYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLL 278

Query: 342 LGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLS 401
           LGQ+G+VSGDQMLSIWRYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+
Sbjct: 279 LGQVGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLT 338

Query: 402 GR 404
           GR
Sbjct: 339 GR 340

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BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.7e-113
Identity = 212/242 (87.60%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 162 YNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGV 221
           Y  K+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAI GCFA+SK+LI ILEAPV  QGV
Sbjct: 118 YPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQGV 177

Query: 222 RFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSIL 281
           RFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+L
Sbjct: 178 RFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSVL 237

Query: 282 FYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQIL 341
           FY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSFQVPVIQ+L
Sbjct: 238 FYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQLL 297

Query: 342 LGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLS 401
           LGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL+
Sbjct: 298 LGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLT 357

Query: 402 GR 404
           GR
Sbjct: 358 GR 359

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BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.5e-76
Identity = 147/238 (61.76%), Postives = 185/238 (77.73%), Query Frame = 0


Query: 166 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQ 225
           D +PDD EMS+FDHL+ELR RIF+S+ AV   +  CF F K L+  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 226 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 285
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ER+ L P+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 286 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 345
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 346 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

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BLAST of Lsi04G002100 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 2.2e-158
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S R SPT RRTKLR TG LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGGNGST+VEDVP I+      +S N A   +  Y+ L          
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIA-----KNSTNGAPDKSDIYNFL---------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                                                    Y  KDLLPDDKEMSVFDHL
Sbjct: 121 -----------------------------------------YPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSK+LIL+LEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 2.2e-158
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S R SPT RRTKLR TG LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGGNGST+VEDVP I+      +S N A   +  Y+ L          
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIA-----KNSTNGAPDKSDIYNFL---------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                                                    Y  KDLLPDDKEMSVFDHL
Sbjct: 121 -----------------------------------------YPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSK+LIL+LEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. ExPASy TrEMBL
Match: A0A0A0KTA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 4.8e-158
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTSQSQL S R SPT RRTKLRFTGLL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGGNGST+VEDVP I+      +S N A   +  Y+ L          
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIA-----KNSTNGAPDKSDIYNFL---------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                                                    Y  KDLLPDD+EMSVFDHL
Sbjct: 121 -----------------------------------------YPSKDLLPDDREMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSK+LIL+LEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.4e-157
Identity = 315/403 (78.16%), Postives = 327/403 (81.14%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASAR  PTSRR+KLRF+ LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQT+LGGGN ST+VEDVP I+ + T  + E                       
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEK---------------------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                 S+V                             +  Y  KDLLPDDKEMSVFDHL
Sbjct: 121 ------SDVY----------------------------NFLYPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 4.1e-157
Identity = 315/403 (78.16%), Postives = 327/403 (81.14%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TS SQLASAR SPTSRR+KLRF+ LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQT+LGGGN ST+VEDVP I+ + T  + E                       
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEK---------------------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                 S+V                             +  Y  KDLLPDDKEMSVFDHL
Sbjct: 121 ------SDVY----------------------------NFLYPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. NCBI nr
Match: XP_008446660.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo] >KAA0034598.1 sec-independent protein translocase protein TATC [Cucumis melo var. makuwa] >TYK09150.1 sec-independent protein translocase protein TATC [Cucumis melo var. makuwa])

HSP 1 Score: 568.5 bits (1464), Expect = 4.5e-158
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTSQSQL S R SPT RRTKLR TG LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGGNGST+VEDVP I+      +S N A   +  Y+ L          
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIA-----KNSTNGAPDKSDIYNFL---------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                                                    Y  KDLLPDDKEMSVFDHL
Sbjct: 121 -----------------------------------------YPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSK+LIL+LEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. NCBI nr
Match: XP_004135073.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus] >KGN52124.1 hypothetical protein Csa_008470 [Cucumis sativus])

HSP 1 Score: 567.4 bits (1461), Expect = 9.9e-158
Identity = 318/403 (78.91%), Postives = 328/403 (81.39%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTSQSQL S R SPT RRTKLRFTGLL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGGNGST+VEDVP I+      +S N A   +  Y+ L          
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIA-----KNSTNGAPDKSDIYNFL---------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                                                    Y  KDLLPDD+EMSVFDHL
Sbjct: 121 -----------------------------------------YPSKDLLPDDREMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSK+LIL+LEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157
Identity = 315/403 (78.16%), Postives = 327/403 (81.14%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASAR  PTSRR+KLRF+ LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQT+LGGGN ST+VEDVP I+ + T  + E                       
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEK---------------------- 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                 S+V                             +  Y  KDLLPDDKEMSVFDHL
Sbjct: 121 ------SDVY----------------------------NFLYPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157
Identity = 315/403 (78.16%), Postives = 327/403 (81.14%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLASAR  PTSRR+KLRF+ LLSRRNFNRFVCSA
Sbjct: 39  MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 98

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQT+LGGGN ST+VEDVP I+ + T  + E                       
Sbjct: 99  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEK---------------------- 158

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
                 S+V                             +  Y  KDLLPDDKEMSVFDHL
Sbjct: 159 ------SDVY----------------------------NFLYPSKDLLPDDKEMSVFDHL 218

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 219 EELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 278

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPAALNF
Sbjct: 279 YCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNF 338

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV
Sbjct: 339 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 385

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 399 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

[Close]

BLAST of Lsi04G002100 vs. NCBI nr
Match: XP_038892645.1 (sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispida])

HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157
Identity = 319/403 (79.16%), Postives = 329/403 (81.64%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSQSQLASARNSPTSRRTKLRFTGLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSQSQLA A  SPT RR+KLRFTGLLSR+NFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSQSQLALAPISPTLRRSKLRFTGLLSRKNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTIVEDVPGISIAKTYVSSENRARICTRNYSCLIEMYVLERNV 120
           VDDDVREKQTELGGG GST+VEDVP I+      +S N A                ER+ 
Sbjct: 61  VDDDVREKQTELGGGKGSTVVEDVPDIA-----ENSTNGAP---------------ERSD 120

Query: 121 LLNVVTSEVVDKTYWDSTCFQILPLYLNVHCISYVAAESLCYNCKDLLPDDKEMSVFDHL 180
           + N +                                    Y  KDLLPDDKEMSVFDHL
Sbjct: 121 IYNFL------------------------------------YPSKDLLPDDKEMSVFDHL 180

Query: 181 EELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240
           EELRQRIFVSVLAVGAAI GCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG
Sbjct: 181 EELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTLKVSG 240

Query: 241 YCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300
           YCGLLLGSPVILYEIIAFVLPGLT+ ERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF
Sbjct: 241 YCGLLLGSPVILYEIIAFVLPGLTKAERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNF 300

Query: 301 FVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYV 360
           FVSYA GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQ+GLVSGDQMLSIWRYV
Sbjct: 301 FVSYAAGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQVGLVSGDQMLSIWRYV 347

Query: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 404
           VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 361 VVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Lsi04G002100 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-115
Identity = 211/242 (87.19%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 162 YNCKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIAGCFAFSKELILILEAPVKEQGV 221
           Y  K+ LPDDKEM++FDHLEELR+RIFVSVLAVGAAI GCFAFSK+LI+ LEAPVK QGV
Sbjct: 99  YPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGV 158

Query: 222 RFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSIL 281
           RFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+L
Sbjct: 159 RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLL 218

Query: 282 FYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQIL 341
           FYAG+AFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+L
Sbjct: 219 FYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLL 278

Query: 342 LGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLS 401
           LGQ+G+VSGDQMLSIWRYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+
Sbjct: 279 LGQVGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLT 338

Query: 402 GR 404
           GR
Sbjct: 339 GR 340

The following BLAST results are available for this feature:

BLAST of Lsi04G002100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	1.1e-114	85.54	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
C4IZX0	3.1e-114	84.68	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9SJV5	7.0e-114	87.19	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
Q9AVE6	2.7e-113	87.60	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
P54086	1.5e-76	61.76	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Lsi04G002100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVD3	2.2e-158	78.91	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	2.2e-158	78.91	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0KTA2	4.8e-158	78.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]
A0A6J1GYD1	1.4e-157	78.16	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	4.1e-157	78.16	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]

BLAST of Lsi04G002100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446660.1	4.5e-158	78.91	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
XP_004135073.1	9.9e-158	78.91	sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus...	[more]
XP_022956650.1	2.9e-157	78.16	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
KAG6601263.1	2.9e-157	78.16	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]
XP_038892645.1	2.9e-157	79.16	sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispi...	[more]

BLAST of Lsi04G002100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	5.0e-115	87.19	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 318..346 score: 45.61 coord: 175..202 score: 38.48 coord: 267..293 score: 41.86 coord: 249..267 score: 54.82
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 177..391 e-value: 1.7E-79 score: 264.6
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 178..386 e-value: 8.5E-61 score: 205.4
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 158..403
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 171..403 score: 16.486357
None	No IPR available	PANTHER	PTHR30371:SF7	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE	coord: 158..403
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 318..337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G002100.1	Lsi04G002100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity