Lsi04G001180 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G001180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	non-symbiotic hemoglobin 2
Location	chr04: 1282298 .. 1284843 (-)
RNA-Seq Expression	Lsi04G001180
Synteny	Lsi04G001180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCCAAAACACCTTATCCTTGAAACTGGTAGAGAGAGAAAGCCAGGAGAGAGAGAGAGAGAGATGGATTTCACAGAGAAGGAAGAAAGTTTAGTGAAAGAATCATGGGATGTTTTGAAGAAGGATTTGCCTTTTTACAGCCTTCATTTCTTTACTCAGTAAGTATTAATTAACTTTATTCTTATTAATAATTTTCTTCAATACATTTTTGTTTTTTTTTTTTCCTGTCTAAATGGTGTTTAATTTATAAATTATCATTACTATAACGTAAGGATATTGGAGATAGCTCCAGATGCGAAGGACATATTTTCTTTCTTAAGGGATTCAGAAGAGATTCCTCAGAACAATCCTAAGCTCAAGGCTCATGCCCTCAAGGTTTTCAAAATGGTGAGTTTTATGTGTTATCATTTCATATTTTACCAAAGTTTAAGGTATTTTATTGCTCTCTTTGTCTTTAACTCTCTAGAATTTCTAGGGTTTTTTTTAACCATAAGTGGGATGAGAATCAAACCTTTAATCTCAAAGTTTCGAAAGCGTAAATTTTATGTTAATTGAGTTGTGTGTTCATTTCTATGTTAATAGATATGTAGAGATAAGATCTTTTCATGTTAAAAATTCACTTTTTGAACATTTTTATTTTGTAGAAGGCCACAAACGAATCTTTTAGCTTATTTTATATAAATAGAAAACTAAATTACGAAAATAAAAAATATACGCTTTTGCATTTTGTCATTTGTTTTAGTATTCTTACTATTTCAAAAGTTGCAATATTATCATGGATCTTTTATAAACAATTTAAGACCACATGTAATATTAGAATACACGATCTGAAAAAGTGTGATGGTGTGACTTGAAACGAAAATTAAAATCGATATGATCATATCATTTCAGTTGACTACATTTTAATAGTTAATGATGTATGATAGTTAAGTTAGCAACCATACATCAGATCACATAATTTATTTGGCTATAAATCATGTGATAGACATTTGTTTTACTCACCAATTCAAATCTAGTTGTTGCTCCTTAATTAAAAATCCCAAAGGCTTATGTTTTTCCCAATTTGGGGACTCTCTGTTTCACTCAATCAATGTAAAGTAGATTACTTTGTTGTTGTGTGATTATATATTTTTAGTCTGTTTCAAAATTTTACAATACACAAGTTGATGTTCAATTTTTTATCTGCAATGGTTGAACTCAAAAAAAAAAATCTATTTACACAAAATAGTAAAATTTTTAGATAGTTGTGATAAACGCCGATAGAAATCTAATGGATGTTGATAGAAGTTTATCAATGTCTATCCATGTTTTTTTTTACTATTTTCTATAAATAGTTTGACATTTTTTTTATCTGAAAAAATTTCTAATATATATATATATATATATATATATATCATTTGATTCGATTCTAATAAGATAAGTTTGAGTGATCATATGTTTCATAAAATCAATAAATGAGATTATAAGTTGAAATGTTGTTTAATGTGCATTGGTTTGGAAATCATAATATTGTAAACTAACACAACAAAAATGAACGAATTGAAGACATGTGAAGCAGCCATTCAATTGAAAGAGAAAGGGGAAGTGATAGTAGCTGAGACTACCCTACAACATTTGGGCTCTGTCCACTTTCGTAATGGAGTCATTGTTCCACAATTCGAGGTAACTTTTTTAATCAATTTTGAAAAAAACAAGTGAGCTGTTTTTTTAAAGAATTGTAAATATAACAAAATTTATTTATGATAGGCTCTTATTAGTAATACAGTCTATTACTTATAGACGTCGAGAGCTGGATCTAAATTTTACTATGTTTGCAAATCTTTTTGAATAGTACTTATATTTAGGAGTTTCCCTTAAAAAAACCTTCTTTTTACTCGTACTCGTAATTATGTTTAAAAGATTATTCAGCTTTTCAAAAGTACTAAATATAGTTTTAAACTTTTAATTTTATGTCGACTTTAAAATTATCCAATAGATTTACAAACTATCAATTTTGCATCTTATAGTTCTCAACCATATTTGAATTTTTCTAAAATTAATAGGTTAGACATAAAAGTAAAAACTAAAAGACGTATGAGACGGAGTAAACTTTAAATTATTTAATTTATTTTGAGAAAAATATGGTAATTTGAATAATTTAAAAGTGGTAATCGGATTTGGGTTATATGGGCAGGTGGTGAAAGAGGCATTGCTTCGAACAGTGAAAGAAGGTGCGGGAGAGAAATGGAGCGACGAAATGGGCAATGCTTGGACACGAGCCTACGATCATTTGGCTTCAGCAATCAAATCTGAAATGAAATGAAATGTCATTTCATTCAAATTTCCTACTACTAGCTACTGCCTTTTTAATTTGCTTCATTTTTTGTGGGAAGAAAAAGAAAAAGAAAATAAATAAAAATATATATTTTGGAAGTAAAAAAGTGTGATGATATTTGTAGTGTAATAATTTGGATTTGGCGATATTGGCAATGGGGCTCAAACTGTCAAAACCTTCCGTCTGTTTAATTATAGTAAATGGTGTAATAAATATATCTATTTACTTCTTC

mRNA sequence

GTCCCAAAACACCTTATCCTTGAAACTGGTAGAGAGAGAAAGCCAGGAGAGAGAGAGAGAGAGATGGATTTCACAGAGAAGGAAGAAAGTTTAGTGAAAGAATCATGGGATGTTTTGAAGAAGGATTTGCCTTTTTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGATGCGAAGGACATATTTTCTTTCTTAAGGGATTCAGAAGAGATTCCTCAGAACAATCCTAAGCTCAAGGCTCATGCCCTCAAGGTTTTCAAAATGGTGGTGAAAGAGGCATTGCTTCGAACAGTGAAAGAAGGTGCGGGAGAGAAATGGAGCGACGAAATGGGCAATGCTTGGACACGAGCCTACGATCATTTGGCTTCAGCAATCAAATCTGAAATGAAATGAAATGTCATTTCATTCAAATTTCCTACTACTAGCTACTGCCTTTTTAATTTGCTTCATTTTTTGTGGGAAGAAAAAGAAAAAGAAAATAAATAAAAATATATATTTTGGAAGTAAAAAAGTGTGATGATATTTGTAGTGTAATAATTTGGATTTGGCGATATTGGCAATGGGGCTCAAACTGTCAAAACCTTCCGTCTGTTTAATTATAGTAAATGGTGTAATAAATATATCTATTTACTTCTTC

Coding sequence (CDS)

ATGGATTTCACAGAGAAGGAAGAAAGTTTAGTGAAAGAATCATGGGATGTTTTGAAGAAGGATTTGCCTTTTTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGATGCGAAGGACATATTTTCTTTCTTAAGGGATTCAGAAGAGATTCCTCAGAACAATCCTAAGCTCAAGGCTCATGCCCTCAAGGTTTTCAAAATGGTGGTGAAAGAGGCATTGCTTCGAACAGTGAAAGAAGGTGCGGGAGAGAAATGGAGCGACGAAATGGGCAATGCTTGGACACGAGCCTACGATCATTTGGCTTCAGCAATCAAATCTGAAATGAAATGA

Protein sequence

MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKMVVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

Homology

[Close]

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot
Match: Q941Q2 (Non-symbiotic hemoglobin 2 OS=Brassica napus OX=3708 GN=HB2 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-38
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 3   FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKA 62
           FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AKD+FSFLRD++E+P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKA 65

Query: 63  HALKVFKM---------------------------------------VVKEALLRTVKEG 113
           HA+KVFKM                                       VVKEAL+RT+KEG
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKEG 125

[Close]

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot
Match: O24521 (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana OX=3702 GN=AHB2 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.9e-38
Identity = 83/149 (55.70%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 3   FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKA 62
           FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AK +FSFLRDS+E+P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKM---------------------------------------VVKEALLRTVKEG 113
           HA+KVFKM                                       VVKEALLRT+KEG
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

[Close]

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot
Match: Q93Y92 (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum OX=3635 GN=HB2 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-35
Identity = 84/152 (55.26%), Postives = 98/152 (64.47%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M FTEK+E LVKESW+VLK+D+P  SL FF+ ILEIAP AK++FSFLR+SEEIPQNNPKL
Sbjct: 1   MGFTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHA+KVFKM                                       VVKEALLRT++
Sbjct: 61  KAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIE 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot
Match: Q941P9 (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum OX=4081 GN=HB2 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-33
Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M FT+K+E+LV++SW+ +K+D+P  SL FF+ ILEIAP AK++FSFL+DS+E+P+NNPKL
Sbjct: 1   MGFTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 112
           +AHA+KVFKM                                       VVKEALLRTVK
Sbjct: 61  RAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot
Match: P08054 (Hemoglobin-1 OS=Casuarina glauca OX=3522 PE=1 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-28
Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M  TEK+E+L+K+SW+VLK+++P +SL  F  I+E AP++K +FSFL+DS EIP+NNPKL
Sbjct: 1   MALTEKQEALLKQSWEVLKQNIPAHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHA  +FK                                        V+K ALL T+K
Sbjct: 61  KAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL
Match: A0A0A0KTH6 (GLOBIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G621920 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.4e-44
Identity = 101/151 (66.89%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDMPFYSLHFFTQILEIAPAAKAMFSFLRDSEEIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIISETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL
Match: A0A5A7SU63 (Non-symbiotic hemoglobin 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002270 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 100/151 (66.23%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL
Match: A0A1S3BFZ4 (non-symbiotic hemoglobin 2 OS=Cucumis melo OX=3656 GN=LOC103489422 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 100/151 (66.23%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL
Match: A0A6J1H076 (non-symbiotic hemoglobin 2 OS=Cucurbita moschata OX=3662 GN=LOC111458415 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 98/151 (64.90%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M+FTEKEE LVKESWDVL KDLP YSLHFFTQILEIAP AK +FSFLRDSE+IPQNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL
Match: A0A6J1J9P1 (non-symbiotic hemoglobin 2 OS=Cucurbita maxima OX=3661 GN=LOC111482997 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 96/151 (63.58%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M+FTEKEE LVKESWDVLKKDLP YSLHFFTQILEIAP AKD+FSFL+ SEE+ QNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLKKDLPLYSLHFFTQILEIAPAAKDMFSFLKGSEEVTQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSQTTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. NCBI nr
Match: XP_038891898.1 (non-symbiotic hemoglobin 2 [Benincasa hispida])

HSP 1 Score: 188.7 bits (478), Expect = 2.7e-44
Identity = 102/151 (67.55%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M+FTEKEE LVKESW+VLKKDLP YSL FFTQILEIAP AK++FSFLRDSEEIPQNNPKL
Sbjct: 1   MEFTEKEEGLVKESWEVLKKDLPLYSLRFFTQILEIAPAAKNMFSFLRDSEEIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. NCBI nr
Match: XP_004142447.1 (non-symbiotic hemoglobin 2 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 101/151 (66.89%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDMPFYSLHFFTQILEIAPAAKAMFSFLRDSEEIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIISETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. NCBI nr
Match: KAE8648838.1 (hypothetical protein Csa_008865 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 101/151 (66.89%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKL
Sbjct: 37  MDFTEKEESLVKESYEVLKKDMPFYSLHFFTQILEIAPAAKAMFSFLRDSEEIPQNNPKL 96

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 97  KAHALKVFKMTCEAAIQLKEKGEVIISETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 156

[Close]

BLAST of Lsi04G001180 vs. NCBI nr
Match: XP_008446801.1 (PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo] >KAA0034682.1 non-symbiotic hemoglobin 2 [Cucumis melo var. makuwa] >TYK09233.1 non-symbiotic hemoglobin 2 [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 100/151 (66.23%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. NCBI nr
Match: XP_022956839.1 (non-symbiotic hemoglobin 2 [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 98/151 (64.90%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKL 60
           M+FTEKEE LVKESWDVL KDLP YSLHFFTQILEIAP AK +FSFLRDSE+IPQNNPKL
Sbjct: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60

Query: 61  KAHALKVFKM---------------------------------------VVKEALLRTVK 113
           KAHALKVFKM                                       VVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

[Close]

BLAST of Lsi04G001180 vs. TAIR 10
Match: AT3G10520.1 (haemoglobin 2 )

HSP 1 Score: 158.7 bits (400), Expect = 2.8e-39
Identity = 83/149 (55.70%), Postives = 102/149 (68.46%), Query Frame = 0


Query: 3   FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKA 62
           FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AK +FSFLRDS+E+P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKM---------------------------------------VVKEALLRTVKEG 113
           HA+KVFKM                                       VVKEALLRT+KEG
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

[Close]

BLAST of Lsi04G001180 vs. TAIR 10
Match: AT2G16060.1 (hemoglobin 1 )

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22
Identity = 61/148 (41.22%), Postives = 75/148 (50.68%), Query Frame = 0


Query: 3   FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKA 62
           FTE++E+LV +SW V+KK+     L  F +I EIAP  K +FSFLRDS    + NPKLK 
Sbjct: 9   FTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLKP 68

Query: 63  HALKVFKM---------------------------------------VVKEALLRTVKEG 112
           HA+ VF M                                       V K ALL T+KE 
Sbjct: 69  HAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEA 128

The following BLAST results are available for this feature:

BLAST of Lsi04G001180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941Q2	3.0e-38	55.03	Non-symbiotic hemoglobin 2 OS=Brassica napus OX=3708 GN=HB2 PE=3 SV=1	[more]
O24521	3.9e-38	55.70	Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana OX=3702 GN=AHB2 PE=1 SV=1	[more]
Q93Y92	1.8e-35	55.26	Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum OX=3635 GN=HB2 PE=3 SV=1	[more]
Q941P9	1.3e-33	50.67	Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum OX=4081 GN=HB2 PE=2 SV=1	[more]
P08054	3.6e-28	44.37	Hemoglobin-1 OS=Casuarina glauca OX=3522 PE=1 SV=2	[more]

BLAST of Lsi04G001180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTH6	6.4e-44	66.89	GLOBIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G621920 PE=3...	[more]
A0A5A7SU63	1.9e-43	66.23	Non-symbiotic hemoglobin 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BFZ4	1.9e-43	66.23	non-symbiotic hemoglobin 2 OS=Cucumis melo OX=3656 GN=LOC103489422 PE=3 SV=1	[more]
A0A6J1H076	1.6e-42	64.90	non-symbiotic hemoglobin 2 OS=Cucurbita moschata OX=3662 GN=LOC111458415 PE=3 SV...	[more]
A0A6J1J9P1	1.3e-41	63.58	non-symbiotic hemoglobin 2 OS=Cucurbita maxima OX=3661 GN=LOC111482997 PE=3 SV=1	[more]

BLAST of Lsi04G001180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891898.1	2.7e-44	67.55	non-symbiotic hemoglobin 2 [Benincasa hispida]	[more]
XP_004142447.1	1.3e-43	66.89	non-symbiotic hemoglobin 2 [Cucumis sativus]	[more]
KAE8648838.1	1.3e-43	66.89	hypothetical protein Csa_008865 [Cucumis sativus]	[more]
XP_008446801.1	3.9e-43	66.23	PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo] >KAA0034682.1 non-symbiotic...	[more]
XP_022956839.1	3.3e-42	64.90	non-symbiotic hemoglobin 2 [Cucurbita moschata]	[more]

BLAST of Lsi04G001180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10520.1	2.8e-39	55.70	haemoglobin 2	[more]
AT2G16060.1	5.2e-22	41.22	hemoglobin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00188	PLANTGLOBIN	coord: 29..49 score: 63.22 coord: 57..85 score: 39.06 coord: 4..21 score: 49.06
None	No IPR available	PANTHER	PTHR22924:SF92	NON-SYMBIOTIC HEMOGLOBIN 2	coord: 71..112
None	No IPR available	PANTHER	PTHR22924:SF92	NON-SYMBIOTIC HEMOGLOBIN 2	coord: 1..71
IPR000971	Globin	PFAM	PF00042	Globin	coord: 8..72 e-value: 7.4E-12 score: 45.8
IPR000971	Globin	PROSITE	PS01033	GLOBIN	coord: 3..71 score: 15.350451
IPR000971	Globin	PROSITE	PS01033	GLOBIN	coord: 72..112 score: 9.196943
IPR012292	Globin/Protoglobin	GENE3D	1.10.490.10	Globins	coord: 72..110 e-value: 5.4E-13 score: 51.5 coord: 1..71 e-value: 1.7E-22 score: 82.3
IPR001032	Leghaemoglobin	PANTHER	PTHR22924	LEGHEMOGLOBIN-RELATED	coord: 71..112 coord: 1..71
IPR019824	Leghaemoglobin, iron-binding site	PROSITE	PS00208	PLANT_GLOBIN	coord: 57..68
IPR009050	Globin-like superfamily	SUPERFAMILY	46458	Globin-like	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G001180.1	Lsi04G001180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044255	cellular lipid metabolic process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019825	oxygen binding