Lsi04G001100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi04G001100
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr04: 1216576 .. 1217554 (+)
RNA-Seq ExpressionLsi04G001100
SyntenyLsi04G001100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGTAAGTAGGAGTTGAAAGTTGGGAACAAAATTACCTTTGATCTGCATGGCATGCTGAAAACAATATCCTCTGCTATGCCATAAGGATTTCCAGTGGTATATACCTACAAATCGATCGGTATTTATGAGTTCAAGGTTCTTCATATGCGCTCAGTTAAGAATTAAGCTTACAAACACTAGTTACATTTATGGTTTTCTTTGTTTCGTTATTTACTTTTAATAAATGTTTTCAAGATCCAAGCCAAGTTTTGAAAACTTAAAGAAAAGGTTCTCAAAAACTTGTTCTTAGTTTTGAACTTTTGACTAAGAAATCAAAATTTTTCTTAAATAAAGATGAAAACAAATAATGGTGAGAAAACAAGCACAATTATCAAATATCGAATATCGAATATTATCAAACTGAGTCCTTAGCTACACCCCATTTTCAACTATTTTTCCAAGTCAAAACTCCCCTCCGTTCTTTTGCTTCCTTGAATAAGTATGCTAAATTAGAGGCCTATCAGCTTATAAAAAAAATGTAATAATACACCATTAATACATAAGTATCAAAGTGATGCTACATAAGATATATGCTTACCCCAGATGAAAACCAATCGCCTTCAGGAGTTGGAGTAATTAAAGACCTTATGGCATCAACAATTGATACAGCAGTTGAAGCAGCTGAAGATCTTCCCCATTTCTCAATCAGCGCACCACCCCTCTGAAAATCCAGACAATGCCTCCGCCCGTGAGTAAACATGTCAATCAAGAGACTATTTGATTAATTGAACAGTGAACACTGTATGTGTTATAACTCCTTTGCTAATAATCTTACCTTCTGTACTTTTTCAGTGAATTCCTCTTCCAACCACCTGTGGTCCTTGATAACCTCTTTAACGGGTAAGCCGTTAATTCTTGCGTTCAAGAAGTCTGGAACCTGGAGTGAAGACGGCGAAATAAGCACGCAATTGAGGGGATTCAAAGAAGCCAGCTAA

mRNA sequence

ATGACATTGAAGCAGCTGAAGATCTTCCCCATTTCTCAATCAGCGCACCACCCCTCTGAAAATCCAGACAATGCCTCCGCCCTGAATTCCTCTTCCAACCACCTGTGGTCCTTGATAACCTCTTTAACGGGTAAGCCGTTAATTCTTGCGTTCAAGAAGTCTGGAACCTGGAGTGAAGACGGCGAAATAAGCACGCAATTGAGGGGATTCAAAGAAGCCAGCTAA

Coding sequence (CDS)

ATGACATTGAAGCAGCTGAAGATCTTCCCCATTTCTCAATCAGCGCACCACCCCTCTGAAAATCCAGACAATGCCTCCGCCCTGAATTCCTCTTCCAACCACCTGTGGTCCTTGATAACCTCTTTAACGGGTAAGCCGTTAATTCTTGCGTTCAAGAAGTCTGGAACCTGGAGTGAAGACGGCGAAATAAGCACGCAATTGAGGGGATTCAAAGAAGCCAGCTAA

Protein sequence

MTLKQLKIFPISQSAHHPSENPDNASALNSSSNHLWSLITSLTGKPLILAFKKSGTWSEDGEISTQLRGFKEAS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G001100.1Lsi04G001100.1mRNA