Lsi04G001090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G001090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Malate dehydrogenase [NADP], chloroplastic
Location	chr04: 1215597 .. 1220557 (-)
RNA-Seq Expression	Lsi04G001090
Synteny	Lsi04G001090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAGACAGCAACATTTGCTAAGCTAGAAAACAGTTAAAAAGGCCCAAATTCTCAATTCCCAATCTCCGATTCGACACGTGTCACTCGCAAAGCCTTAGAAAATCATTTCAAATAATCCTTTTCTTTCTCTCAATCTCTATCCCATCTCTCCCGCTCTCTCCCACCTCCATAGCCAGAAACGAAGCTTTGCTTCTTCTTCTTTCTTCCCTCAATCCCAATCCCTCTGAATAAGACCTCCGTTTTCCACTCTTCAAATCCGCCATTTCTCCGTTTCCGTTCTCTCTCTGATCTCCCAACTCCCTCTGCTGCAATGGCTGTAGCAGAGTTGTCATCCTCTTTAAAAACTGAACTCAACTTCTCATCCAAGACTGTTTTTCAGTCGAATCGTTTCTCCAATCACCGTCGCTGCTCTTTCCGGCCGTTTCATCGATCCCGAAGTCCCCGGGTCACTTGCTCTATTGCGCCCAAGTGAGCTTCCTTTGTTTGAAATCTTATTAATATAAGTAAATTTGTGCTTGTCTGAGTGTTTGTGAGTGAGTTTTGAAGATTTTTTTATGTGTTTATTTTAGAGAAATTATAGTTGAATTGTTTGCCCTGTTCAATTTTTTTCAGTCAGGTTGAGGCAGCTCCAGTTGCAGCGAAAACAGAGGACCCTAAGAGTAAAAGCGAGTGTTATGGTGTTTTTTGCCTCACCTATGATTTAAAAGCTGTAAGTTCTTCAATTCTCATAGGGGGTTGCTTTGGTTTAATGAAAAAGCATAGTTGGACTGTGTCTCAATAACCAATTGTAGCGTATGACTCTTTTATGTAATCTCTCATTACTTACAGTGCTTGATTCTTTTGTTTGTTTATTCTGAGTTATGATATAGTCTAATTGTAATGAGCAGCAATTTTAGGGATAATAACCAAGTGTATAGCAATATTTTTTTAAAAATTACAAATATAGCAAAATCTATCGGTGATAGACTCCTATCACTGATAGATTTTTATAGTCTAGGTGGTCTATCACTGATAGACTTTGCTATATTTGCAATTTTTTAAAAATGTTGCTATATATGCTAATACTTTAAATCTGATTGCTATACTTTCAACTGTCACTATGATCTAATTATCAAATTATTGGTACTGCCTTAAGCTCATGCTCATTATAAAAATACAAGATATTACCCTTAATTTTGGTCTTATTTTTGAGACAGAACGAAATTATTACATACAAATGAGATAATATGTCAACTTTGAAATTGGACAAAAAAATTTCTTTGGCCCTGACATATTTTGTACTCATCACAGGAGGAAGAGACAACATCATGGAAGAAACTGATTAATGTTGCAGTCTCTGGTGCTGCTGGAATGATATCCAATCATCTTCTCTTCAAGGTAAGAATTCATTCCCCAGCCAGTATACTAACAATTGAACCAAACTTTCATTCACACTATAAAAGAAGTAAAATGTAGACCTTTACCACTATCACAGTTGTATTGAAAAAAAATTTAAAATTCACAGAGGTAAACTAATAGGATCCTTACCTTTTAATTTTGTGTCTAATAAGTTGAAGAAGTTTACAAAATGTCTATAGATCAAGATCTTATTAGACATTAAATAATCTTTAATTTTGCTGACCTATTAAACACTTTTTAATAATCAGGGACTAAAGCTTTCAGTTTATCCCGTTTTCTATTGACAGCTTGTTCTCTTAGTTACTTGAGTGCTAGGGAGAAATGGAGTGAGTATCTAGTTTCCTTTGTTGTATTTCATGTCCTGATATTTTGTACATTCTGTAAAGACGAACAATTCTTCTGGTGGTTTGGATGAAACCTTAGGAGAAACCTCAAACTTTTCTCTCATTTTGTTCTGATGGTTTGGATGAAATATTATTTTCTTGTTTCATTAGCTTGCATCTGGTGAAGTTTTTGGTCCTGATCAACCGATTGCATTGAAGCTATTGGGATCAGAAAAGTCATTCCAAGCACTTGAAGGCAAGTTTGGCACACTTAAAAGAAATTCATTATTGCTTTGAAGATCATTTAATTGCATGGTATTTCTATAGTCGCTCATTTTTACAAATCTTGAGCAGTGAAGATAAAATGCATGAGACAAAAGTTTCTTTTGATTCCTCTATGAAGTTTAGCCTGTATCTGCCTTTTTTTCCCTTGACGAGTTGAGCACAGTTAACATAAGAAATTGCAAGTCTATAATGTTTAAAACCACCAAACTTTAAGATTGAACTGAAATCTTCCAGCTATCCTAGAAATAATCTACCCTTGACATCTCCATATATGCAGGTGTTGCTATGGAATTGGAGGACTCCCTTTTCCCTTTATTGAGGGAGGTGGTGATAAGCATTGATCCTTACGAAGTATTCCAAGATGCAGAATGGGCTCTTTTGATAGGAGCAAAGCCTCGAGGGCCGGGAATGGAACGTGCTGGTTTATTAGATATAAATGGGCAGATATTTGCTGAACAAGTACGTTTATGAATTATTTTTTGAGATTCATTTTTTCTGCCCTTCGAATAAATATAGGAAATTTGTTTCATGTATCTTTTGATTTTATCATTTAACCATAATAAAGGGCAAAGCTCTAAATGCTGTTGCATCCCCAAATGTCAAAGTCATAGTTGTGGGCAATCCCTGCAATACCAAGTGAGTTCATGTTTTATTCAGCACGAGTTTCTTTAAGTGTGTGCAAGATATAACTTCTCTTCTCCTTTTCATTCCATTCAGTGCATTAATTTGTATGAAAAATGCTCCGAGAATTCCCGCAAAGAACTTCCACGCTTTAACTCGATTAGACGAGAATCGAGCAAAATGTCAGGTACTATACCACTAACATGCTTGATGCTACATGTAATATGTTTTGGAATAATCAAGACTTCCTTACTTTCATGACTTGTTCAGCTGGCTCTGAAAGCGGGTGTCTTCTATGATAAAGTGTCAAACATGACCATTTGGGGCAACCACTCAACAACTCAGGTTACCATATTGTTCATCCTCTAGAAGCTTAGCTGGCTTCTTTGAATCCCCTCAATTGCGTGCTTATTTCGCCGTCTTCACTCCAGGTTCCAGACTTCTTGAACGCAAGAATTAACGGCTTACCCGTTAAAGAGGTTATCAAGGACCACAGGTGGTTGGAAGAGGAATTCACTGAAAAAGTACAGAAGGTAAGATTATTAGCAAAGGAGTTATAACACATACAGTGTTCACTGTTCAATTAATCAAATAGTCTCTTGATTGACATGTTTACTCACGGGCGGAGGCATTGTCTGGATTTTCAGAGGGGTGGTGCGCTGATTGAGAAATGGGGAAGATCTTCAGCTGCTTCAACTGCTGTATCAATTGTTGATGCCATAAGGTCTTTAATTACTCCAACTCCTGAAGGCGATTGGTTTTCATCTGGGGTAAGCATATATCTTATGTAGCATCACTTTGATACTTATGTATTAATGGTGTATTATTACATTTTTTTTATAAGCTGATAGGCCTCTAATTTAGCATACTTATTCAAGGAAGCAAAAGAACGGAGGGGAGTTTTGACTTGGAAAAATAGTTGAAAATGGGGTGTAGCTAAGGACTCAGTTTGATAATATTCGATATTCGATATTTGATAATTGTGCTTGTTTTCTCACCATTATTTGTTTTCATCTTTATTTAAGAAAAATTTTGATTTCTTAGTCAAAAGTTCAAAACTAAGAACAAGTTTTTGAGAACCTTTTCTTTAAGTTTTCAAAACTTGGCTTGGATCTTGAAAACATTTATTAAAAGTAAATAACGAAACAAAGAAAACCATAAATGTAACTAGTGTTTGTAAGCTTAATTCTTAACTGAGCGCATATGAAGAACCTTGAACTCATAAATACCGATCGATTTGTAGGTATATACCACTGGAAATCCTTATGGCATAGCAGAGGATATTGTTTTCAGCATGCCATGCAGATCAAAGGTAATTTTGTTCCCAACTTTCAACTCCTACTTACTGTCATAGTGTTTGTAATCAGTAATCTGTCGCTTTCGCAGGGAGATGGTGACTATGAACTTGTGAAAGAGGTGATATTTGATGACTATCTCCGCAAACGAATTGCCAAGGTCTGCTATTTTTTTTTTCCAATTCAGTAAACATTTGTTTGTGGAATTATTAAACCACCACTTAACCCAAAAGCATTAGCTAATAGTAAATTTAATTCAATCTACAGGACTTCATGTTATAATACCATGTTAGATTACTCGTTGAACCAAAAATTTAAGTTAATAGTTTACGTTAAATTTAGTTAGATTAATACCTCGACAAGAACAAGCGTAAACTTTTCCAAGTTGAACTCAACAGTCCTACACTCATGAAAGAAGTTTTCTCCCCCTTTTCTTTTCCTCTTAAACAAATATTATGACGCATCCCCGTCTTTTTTCGGTTTCTTATCAGATGAATTTACACAACACAACGAAACTGGTCTCGGTTATCATCTTGCTACCGGATTTTGGCTATCGTCAAACTGCCTAATTCATTTTATTTTGCAATCTTTTTCTTTACAGACTGAAGCTGAGTTGCTAGCTGAGAAGAGATGTGTGGCTCACCTCACAGGAGAGGTCAGATTTTAACTCCTCTTTTTCTTTTTTTCCCTCTAAGGTTACTTCACATCTTTCTCTTATTGACCTACTAACAATGGATTATTTCTTCCATCTTCTCTCAGGGTATTGCTGTATGTGATCTACCAGAAGACACGATGCTTCCTGGAGAAATGTAAGGTTCCATCATTCACATGGCCCTGAGCCTCAATTTTATATTTGGGCTGCTTTATGTTACTTTCGTATTTGCATTAAACCACATATTATATGTGAATATTGCATGTAAGTTGCGGGAATGATAGTAAAGTTAATAATAATAATTGTTATTTTTCTGATATGAATCGACAATAAAATATTACTCAAGTTTGGTTGATTACAAGTTTCCATTCTGCTTGTGATATG

mRNA sequence

TATCAAGACAGCAACATTTGCTAAGCTAGAAAACAGTTAAAAAGGCCCAAATTCTCAATTCCCAATCTCCGATTCGACACGTGTCACTCGCAAAGCCTTAGAAAATCATTTCAAATAATCCTTTTCTTTCTCTCAATCTCTATCCCATCTCTCCCGCTCTCTCCCACCTCCATAGCCAGAAACGAAGCTTTGCTTCTTCTTCTTTCTTCCCTCAATCCCAATCCCTCTGAATAAGACCTCCGTTTTCCACTCTTCAAATCCGCCATTTCTCCGTTTCCGTTCTCTCTCTGATCTCCCAACTCCCTCTGCTGCAATGGCTGTAGCAGAGTTGTCATCCTCTTTAAAAACTGAACTCAACTTCTCATCCAAGACTGTTTTTCAGTCGAATCGTTTCTCCAATCACCGTCGCTGCTCTTTCCGGCCGTTTCATCGATCCCGAAGTCCCCGGGTCACTTGCTCTATTGCGCCCAATCAGGTTGAGGCAGCTCCAGTTGCAGCGAAAACAGAGGACCCTAAGAGTAAAAGCGAGTGTTATGGTGTTTTTTGCCTCACCTATGATTTAAAAGCTGTAAGTGTTGCTATGGAATTGGAGGACTCCCTTTTCCCTTTATTGAGGGAGGTGGTGATAAGCATTGATCCTTACGAAGTATTCCAAGATGCAGAATGGGCTCTTTTGATAGGAGCAAAGCCTCGAGGGCCGGGAATGGAACGTGCTGGTTTATTAGATATAAATGGGCAGATATTTGCTGAACAAGGCAAAGCTCTAAATGCTGTTGCATCCCCAAATGTCAAAGTCATAGTTGTGGGCAATCCCTGCAATACCAATGCATTAATTTGTATGAAAAATGCTCCGAGAATTCCCGCAAAGAACTTCCACGCTTTAACTCGATTAGACGAGAATCGAGCAAAATGTCAGCTGGCTCTGAAAGCGGGTGTCTTCTATGATAAAGTGTCAAACATGACCATTTGGGGCAACCACTCAACAACTCAGGTTCCAGACTTCTTGAACGCAAGAATTAACGGCTTACCCGTTAAAGAGGTTATCAAGGACCACAGGTGGTTGGAAGAGGAATTCACTGAAAAAGTACAGAAGAGGGGTGGTGCGCTGATTGAGAAATGGGGAAGATCTTCAGCTGCTTCAACTGCTGTATCAATTGTTGATGCCATAAGGTCTTTAATTACTCCAACTCCTGAAGGCGATTGGTTTTCATCTGGGGGAGATGGTGACTATGAACTTGTGAAAGAGGTGATATTTGATGACTATCTCCGCAAACGAATTGCCAAGACTGAAGCTGAGTTGCTAGCTGAGAAGAGATGTGTGGCTCACCTCACAGGAGAGGGTATTGCTGTATGTGATCTACCAGAAGACACGATGCTTCCTGGAGAAATGTAAGGTTCCATCATTCACATGGCCCTGAGCCTCAATTTTATATTTGGGCTGCTTTATGTTACTTTCGTATTTGCATTAAACCACATATTATATGTGAATATTGCATGTAAGTTGCGGGAATGATAGTAAAGTTAATAATAATAATTGTTATTTTTCTGATATGAATCGACAATAAAATATTACTCAAGTTTGGTTGATTACAAGTTTCCATTCTGCTTGTGATATG

Coding sequence (CDS)

ATGGCTGTAGCAGAGTTGTCATCCTCTTTAAAAACTGAACTCAACTTCTCATCCAAGACTGTTTTTCAGTCGAATCGTTTCTCCAATCACCGTCGCTGCTCTTTCCGGCCGTTTCATCGATCCCGAAGTCCCCGGGTCACTTGCTCTATTGCGCCCAATCAGGTTGAGGCAGCTCCAGTTGCAGCGAAAACAGAGGACCCTAAGAGTAAAAGCGAGTGTTATGGTGTTTTTTGCCTCACCTATGATTTAAAAGCTGTAAGTGTTGCTATGGAATTGGAGGACTCCCTTTTCCCTTTATTGAGGGAGGTGGTGATAAGCATTGATCCTTACGAAGTATTCCAAGATGCAGAATGGGCTCTTTTGATAGGAGCAAAGCCTCGAGGGCCGGGAATGGAACGTGCTGGTTTATTAGATATAAATGGGCAGATATTTGCTGAACAAGGCAAAGCTCTAAATGCTGTTGCATCCCCAAATGTCAAAGTCATAGTTGTGGGCAATCCCTGCAATACCAATGCATTAATTTGTATGAAAAATGCTCCGAGAATTCCCGCAAAGAACTTCCACGCTTTAACTCGATTAGACGAGAATCGAGCAAAATGTCAGCTGGCTCTGAAAGCGGGTGTCTTCTATGATAAAGTGTCAAACATGACCATTTGGGGCAACCACTCAACAACTCAGGTTCCAGACTTCTTGAACGCAAGAATTAACGGCTTACCCGTTAAAGAGGTTATCAAGGACCACAGGTGGTTGGAAGAGGAATTCACTGAAAAAGTACAGAAGAGGGGTGGTGCGCTGATTGAGAAATGGGGAAGATCTTCAGCTGCTTCAACTGCTGTATCAATTGTTGATGCCATAAGGTCTTTAATTACTCCAACTCCTGAAGGCGATTGGTTTTCATCTGGGGGAGATGGTGACTATGAACTTGTGAAAGAGGTGATATTTGATGACTATCTCCGCAAACGAATTGCCAAGACTGAAGCTGAGTTGCTAGCTGAGAAGAGATGTGTGGCTCACCTCACAGGAGAGGGTATTGCTGTATGTGATCTACCAGAAGACACGATGCTTCCTGGAGAAATGTAA

Protein sequence

MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPVAAKTEDPKSKSECYGVFCLTYDLKAVSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSGGDGDYELVKEVIFDDYLRKRIAKTEAELLAEKRCVAHLTGEGIAVCDLPEDTMLPGEM

Homology

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BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot
Match: O48902 (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa OX=3879 GN=MDH1 PE=2 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 5.2e-161
Identity = 300/439 (68.34%), Postives = 329/439 (74.94%), Query Frame = 0


Query: 1   MAVAELSSSL-KTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MA+ +L+++  KT+L+ SS+  F S     H  C+  P HR++  R++CS+APNQV+A  
Sbjct: 1   MALTQLNNTCSKTQLHSSSQLSFLSRTLPRHHHCTLAPLHRTQHARISCSVAPNQVQAP- 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
            A +T+DPKSK +CYGVFCLTYDLKA                                  
Sbjct: 61  -AVQTQDPKSKPDCYGVFCLTYDLKAEEETKSWKKLITIAVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG
Sbjct: 121 VFGPNQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVAS NVKVIVVGNPCNTNALIC+KNAP IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPNIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARI+GLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDH+WLEEEFTEKVQKRGGALI+KWGRSSAAST+VSIVDAIRSLI PTPEGDWFS+G  
Sbjct: 301 IKDHKWLEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLIIPTPEGDWFSTGVY 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot
Match: P21528 (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum OX=3888 PE=1 SV=2)

HSP 1 Score: 552.0 bits (1421), Expect = 5.0e-156
Identity = 295/443 (66.59%), Postives = 326/443 (73.59%), Query Frame = 0


Query: 1   MAVAELSSSL-KTELNFSSKTVF----QSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQV 60
           MA+ +L+S+  K +L+ SS+  F    ++     H   +F P HR++  R++CS+APNQV
Sbjct: 1   MALTQLNSTCSKPQLHSSSQLSFLSRTRTRTLPRHYHSTFAPLHRTQHARISCSVAPNQV 60

Query: 61  EAAPVAAKTEDPKSKSECYGVFCLTYDLKA------------------------------ 120
           +    AA+T+DPK K +CYGVFCLTYDLKA                              
Sbjct: 61  QVP--AAQTQDPKGKPDCYGVFCLTYDLKAEEETKSWKKLINIAVSGAAGMISNHLLFKL 120

Query: 121 --------------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWA 180
                                       VAMELEDSLFPLLREVVISIDPYEVFQDAEWA
Sbjct: 121 ASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWA 180

Query: 181 LLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNA 240
           LLIGAKPRGPG+ERA LLDINGQIFAEQGKALNAVAS N KVIVVGNPCNTNALIC+KNA
Sbjct: 181 LLIGAKPRGPGVERAALLDINGQIFAEQGKALNAVASRNAKVIVVGNPCNTNALICLKNA 240

Query: 241 PRIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLP 300
           P IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARI+GLP
Sbjct: 241 PNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARIDGLP 300

Query: 301 VKEVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFS 360
           VKEVIKD++WLEEEFTEKVQKRGG LI+KWGRSSAAST+VSIVDAIRSLITPTPEGDWFS
Sbjct: 301 VKEVIKDNKWLEEEFTEKVQKRGGVLIQKWGRSSAASTSVSIVDAIRSLITPTPEGDWFS 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot
Match: Q05145 (Malate dehydrogenase [NADP], chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=MDH1 PE=2 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 5.1e-148
Identity = 287/442 (64.93%), Postives = 312/442 (70.59%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSK-TVFQSNRFSNHRRCSFRPFHRSRSPR--VTCSIAPNQVEA 60
           MAVAELS S KT+L    + +   S R S+HR+ S R   R  S R  + CS+APNQV+ 
Sbjct: 1   MAVAELSPSYKTQLKTCQQLSSSLSTRLSDHRKFSLRLLPRPVSVRGGIRCSVAPNQVQ- 60

Query: 61  APVAAKTEDPKSKSECYGVFCLTYDLKA-------------------------------- 120
           APVA   E    K ECYG+FCLTYDLKA                                
Sbjct: 61  APVAVPAEGQTGKPECYGIFCLTYDLKAEEETKTWKKMITIAVSGAAGMISNHLLFKLAS 120

Query: 121 ------------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALL 180
                                     VAMELEDSL+PLLR V I IDPY++FQDAEWALL
Sbjct: 121 GEVFGPDQPIALKLLGSERSFNALEGVAMELEDSLYPLLRAVSIGIDPYDIFQDAEWALL 180

Query: 181 IGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPR 240
           IGAKPRGPGMERA LLDINGQIFAEQGKALNAVAS NVKVIVVGNPCNTNALIC+KNAP 
Sbjct: 181 IGAKPRGPGMERADLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAPN 240

Query: 241 IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVK 300
           IPAKNFH LTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+I+GLPVK
Sbjct: 241 IPAKNFHGLTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKIDGLPVK 300

Query: 301 EVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG 360
            VIKDH+WLEEEFT  +QKRGGALI+KWGRSSAASTAVSI DAI+SL+TPTPEGDWFSS 
Sbjct: 301 TVIKDHKWLEEEFTVMIQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSSA 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot
Match: Q8H1E2 (Malate dehydrogenase [NADP], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g58330 PE=2 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 9.2e-142
Identity = 284/445 (63.82%), Postives = 308/445 (69.21%), Query Frame = 0


Query: 1   MAVAELSSSLKTE--LNFSSKTVFQSN-RFSNH-RRCSFRPFHRSR-SPRVTCSIAPNQV 60
           MA+AELS+   T   LN SS+    S    SNH R     P H +  + +++CS++ N  
Sbjct: 1   MAMAELSTPKTTSPFLNSSSRLRLSSKLHLSNHFRHLLLPPLHTTTPNSKISCSVSQN-- 60

Query: 61  EAAPVAAKTED-PKSKSECYGVFCLTYDLKA----------------------------- 120
             APVA +     K+K ECYGVFCLTYDLKA                             
Sbjct: 61  SQAPVAVQENGLVKTKKECYGVFCLTYDLKAEEETRSWKKLINIAVSGAAGMISNHLLFK 120

Query: 121 ---------------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEW 180
                                        VAMELEDSLFPLLREV I  DP EVFQD EW
Sbjct: 121 LASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEW 180

Query: 181 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKN 240
           A+LIGAKPRGPGMERA LLDINGQIFAEQGKALN  ASPNVKV+VVGNPCNTNALIC+KN
Sbjct: 181 AILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNTNALICLKN 240

Query: 241 APRIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300
           AP IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL
Sbjct: 241 APNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300

Query: 301 PVKEVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWF 360
           PVKEVI DH+WLEE FTE VQKRGG LI+KWGRSSAASTAVSIVDAI+SL+TPTPEGDWF
Sbjct: 301 PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWF 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot
Match: P52426 (Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea OX=3562 GN=MDH PE=1 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 1.0e-140
Identity = 279/439 (63.55%), Postives = 303/439 (69.02%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAELS   +T++       + SN   NH+         SR   + CS+APNQV+  PV
Sbjct: 1   MAVAELSPCYQTQIVKPPHLSWLSN---NHKLNLLGLPKASRITEICCSLAPNQVQ-TPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLK--------------AVS------------------- 120
           A  T     K ECYGVFC TYDLK              A+S                   
Sbjct: 61  AVPTGAQSIKPECYGVFCWTYDLKKEEETRSWKKMITIAISGAAGTISNHLLFKLASGVV 120

Query: 121 -----------------------VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSL+PLLREV I IDPYEVF+DAEWALLIGA
Sbjct: 121 FGPDQPIALKLLGSEKSFHALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAEWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERA LLDING+I+AEQGKALNAVASPNVKVIVVGNPCNTNALIC+KN P IPA
Sbjct: 181 KPRGPGMERADLLDINGKIYAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNPPNIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFH+LTRLDENRAKCQLALKAGVFYDKVSN+TIWGNHSTTQVPDF+NA+I G+PVKEVI
Sbjct: 241 KNFHSLTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFVNAQIGGVPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           K  +WLEEEFTEKV+KRGG LI+KWGRSSAASTAVSIVDAI  LITPTP GDWF SG   
Sbjct: 301 KAQKWLEEEFTEKVRKRGGVLIQKWGRSSAASTAVSIVDAINPLITPTPPGDWFPSGVYT 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL
Match: A0A5D3CB64 (Malate dehydrogenase [NADP], chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002310 PE=3 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 5.8e-179
Identity = 338/439 (76.99%), Postives = 349/439 (79.50%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFS-NHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MAVAELSSSLKTELNFSS T+F SNRFS +HRRCSFRPFHRS++PRVTCSI  NQVEAAP
Sbjct: 1   MAVAELSSSLKTELNFSSNTLFHSNRFSADHRRCSFRPFHRSQTPRVTCSI--NQVEAAP 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
           V AKTEDPKSKS+CYGVFCLTYDLKA                                  
Sbjct: 61  VTAKTEDPKSKSDCYGVFCLTYDLKAEEETTSWKKLINVSVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDP+EVFQDAEWALLIG
Sbjct: 121 VFGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPHEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+INGLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSL+TPTPEGDWFSSG  
Sbjct: 301 IKDHRWLEEEFTEKVQKRGGLLIEKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSSGVY 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL
Match: A0A1S3BGM0 (Malate dehydrogenase [NADP], chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489426 PE=3 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 5.8e-179
Identity = 338/439 (76.99%), Postives = 349/439 (79.50%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFS-NHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MAVAELSSSLKTELNFSS T+F SNRFS +HRRCSFRPFHRS++PRVTCSI  NQVEAAP
Sbjct: 1   MAVAELSSSLKTELNFSSNTLFHSNRFSADHRRCSFRPFHRSQTPRVTCSI--NQVEAAP 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
           V AKTEDPKSKS+CYGVFCLTYDLKA                                  
Sbjct: 61  VTAKTEDPKSKSDCYGVFCLTYDLKAEEETTSWKKLINVSVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDP+EVFQDAEWALLIG
Sbjct: 121 VFGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPHEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+INGLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSL+TPTPEGDWFSSG  
Sbjct: 301 IKDHRWLEEEFTEKVQKRGGLLIEKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSSGVY 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL
Match: A0A6J1G116 (Malate dehydrogenase [NADP], chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449691 PE=3 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.9e-178
Identity = 331/438 (75.57%), Postives = 347/438 (79.22%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAE  SSLK++LN SS T FQ+NRF +HRRCSFRPF+R+RS  +TCS+APNQVEAAPV
Sbjct: 1   MAVAEFPSSLKSQLNLSSTTAFQANRFYDHRRCSFRPFYRARSSPITCSVAPNQVEAAPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLKA----------------------------------- 120
           AAKT +PKSKS+CYGVFCLTYDLKA                                   
Sbjct: 61  AAKTGEPKSKSDCYGVFCLTYDLKAEEETTSWKKMINIAVSGAAGMISNHLLFKLAAGEV 120

Query: 121 ---------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSLFPLLREVVISIDPYEVFQDA+WALLIGA
Sbjct: 121 FGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDADWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IPA
Sbjct: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNARINGLPVKEVI
Sbjct: 241 KNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           KDHRWLEEEFTEKVQKRGG LIEKWGRSSAAST+VSIVDAIRSLITPTPEGDWFSSG   
Sbjct: 301 KDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYS 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL
Match: A0A0A0KTH8 (Malate dehydrogenase [NADP], chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G622460 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-178
Identity = 337/439 (76.77%), Postives = 348/439 (79.27%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNR-FSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MAVAELSSSLKTELNFSS ++F SNR F++HRRCSFRPFHRSR+ RVTCSI  NQVEAAP
Sbjct: 1   MAVAELSSSLKTELNFSSNSLFHSNRFFADHRRCSFRPFHRSRTSRVTCSI--NQVEAAP 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
           VAAKTEDPKSKSECYGVFCLTYDLKA                                  
Sbjct: 61  VAAKTEDPKSKSECYGVFCLTYDLKAEEETTSWKKLINISVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG
Sbjct: 121 VFGPDQPIALKLLGSERSFQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVASPNVKVI+VGNPCNTNALIC+KNAP+IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASPNVKVIIVGNPCNTNALICLKNAPKIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNA+INGLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNAKINGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG  
Sbjct: 301 IKDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSGVY 360

[Close]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL
Match: A0A6J1HXB5 (Malate dehydrogenase [NADP], chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467500 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.4e-178
Identity = 330/438 (75.34%), Postives = 346/438 (79.00%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAE  SSLK++LN SS TVFQ+NRF NHRRCSFRPF+R+RS  +TCS+APNQ+EAAPV
Sbjct: 1   MAVAEFPSSLKSQLNLSSTTVFQANRFHNHRRCSFRPFYRARSSPITCSVAPNQIEAAPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLKA----------------------------------- 120
           AAKT +PKSKS+CYGVFCLTYDLKA                                   
Sbjct: 61  AAKTGEPKSKSDCYGVFCLTYDLKAEEETTSWKKMINIAVSGAAGMISNHLLFKLAAGEV 120

Query: 121 ---------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSLFPLLREVVISIDPYEVFQDA+WALLIGA
Sbjct: 121 FGPDQPIALKLLGSERSFQALEGVAMELEDSLFPLLREVVISIDPYEVFQDADWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IPA
Sbjct: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNARINGLPVKEVI
Sbjct: 241 KNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           KDHRWLEEEFTEKVQKRGG LIEKWGRSSAAST+VSIVDAIRSLI PTPEGDWFSSG   
Sbjct: 301 KDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTSVSIVDAIRSLIIPTPEGDWFSSGVYS 360

[Close]

BLAST of Lsi04G001090 vs. NCBI nr
Match: XP_038891999.1 (malate dehydrogenase [NADP], chloroplastic [Benincasa hispida])

HSP 1 Score: 663.7 bits (1711), Expect = 9.1e-187
Identity = 350/438 (79.91%), Postives = 355/438 (81.05%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAELSSSLKTELNFSSKTVFQSNRFSNHRR SFRPF+RSRSPRVTCSIAPNQVEAAPV
Sbjct: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRSSFRPFYRSRSPRVTCSIAPNQVEAAPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLKA----------------------------------- 120
           AAKTEDPKSKSEC+GVFCLTYDLKA                                   
Sbjct: 61  AAKTEDPKSKSECFGVFCLTYDLKAEEETTSWKKLINVAVSGAAGMISNHLLFKLASGEV 120

Query: 121 ---------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA
Sbjct: 121 FGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IPA
Sbjct: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI
Sbjct: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           KDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG   
Sbjct: 301 KDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSGVYT 360

[Close]

BLAST of Lsi04G001090 vs. NCBI nr
Match: XP_008446809.1 (PREDICTED: malate dehydrogenase [NADP], chloroplastic [Cucumis melo] >TYK09237.1 malate dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 636.7 bits (1641), Expect = 1.2e-178
Identity = 338/439 (76.99%), Postives = 349/439 (79.50%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFS-NHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MAVAELSSSLKTELNFSS T+F SNRFS +HRRCSFRPFHRS++PRVTCSI  NQVEAAP
Sbjct: 1   MAVAELSSSLKTELNFSSNTLFHSNRFSADHRRCSFRPFHRSQTPRVTCSI--NQVEAAP 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
           V AKTEDPKSKS+CYGVFCLTYDLKA                                  
Sbjct: 61  VTAKTEDPKSKSDCYGVFCLTYDLKAEEETTSWKKLINVSVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDP+EVFQDAEWALLIG
Sbjct: 121 VFGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPHEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNA+INGLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNAKINGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSL+TPTPEGDWFSSG  
Sbjct: 301 IKDHRWLEEEFTEKVQKRGGLLIEKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFSSGVY 360

[Close]

BLAST of Lsi04G001090 vs. NCBI nr
Match: XP_023541500.1 (malate dehydrogenase [NADP], chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636.0 bits (1639), Expect = 2.0e-178
Identity = 334/438 (76.26%), Postives = 349/438 (79.68%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAE  SSLK++LN SS T FQ+NRF NHRRCSFRPF+R+RS  +TCS+APNQVEAAPV
Sbjct: 1   MAVAEFPSSLKSQLNLSSTTAFQANRFYNHRRCSFRPFYRARSSPITCSVAPNQVEAAPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLK--------------AVS------------------- 120
           AAKT +PKSKS+CYGVFCLTYDLK              AVS                   
Sbjct: 61  AAKTGEPKSKSDCYGVFCLTYDLKDEEETTSWKKMINIAVSGAAGMISNHLLFKLAAGEV 120

Query: 121 -----------------------VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSLFPLLREVVISIDPYEVFQDA+WALLIGA
Sbjct: 121 FGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDADWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IPA
Sbjct: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNARINGLPVKEVI
Sbjct: 241 KNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           KDHRWLEEEFTEKVQKRGG LIEKWGRSSAAST+VSIVDAIRSLITPTPEGDWFSSG   
Sbjct: 301 KDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYS 360

[Close]

BLAST of Lsi04G001090 vs. NCBI nr
Match: XP_022945464.1 (malate dehydrogenase [NADP], chloroplastic [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 5.9e-178
Identity = 331/438 (75.57%), Postives = 347/438 (79.22%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNRFSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAPV 60
           MAVAE  SSLK++LN SS T FQ+NRF +HRRCSFRPF+R+RS  +TCS+APNQVEAAPV
Sbjct: 1   MAVAEFPSSLKSQLNLSSTTAFQANRFYDHRRCSFRPFYRARSSPITCSVAPNQVEAAPV 60

Query: 61  AAKTEDPKSKSECYGVFCLTYDLKA----------------------------------- 120
           AAKT +PKSKS+CYGVFCLTYDLKA                                   
Sbjct: 61  AAKTGEPKSKSDCYGVFCLTYDLKAEEETTSWKKMINIAVSGAAGMISNHLLFKLAAGEV 120

Query: 121 ---------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGA 180
                                  VAMELEDSLFPLLREVVISIDPYEVFQDA+WALLIGA
Sbjct: 121 FGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDADWALLIGA 180

Query: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPA 240
           KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALIC+KNAP+IPA
Sbjct: 181 KPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNAPKIPA 240

Query: 241 KNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300
           KNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNARINGLPVKEVI
Sbjct: 241 KNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI 300

Query: 301 KDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--- 360
           KDHRWLEEEFTEKVQKRGG LIEKWGRSSAAST+VSIVDAIRSLITPTPEGDWFSSG   
Sbjct: 301 KDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTSVSIVDAIRSLITPTPEGDWFSSGVYS 360

[Close]

BLAST of Lsi04G001090 vs. NCBI nr
Match: XP_004142443.1 (malate dehydrogenase [NADP], chloroplastic [Cucumis sativus] >KGN52229.1 hypothetical protein Csa_009300 [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 7.7e-178
Identity = 337/439 (76.77%), Postives = 348/439 (79.27%), Query Frame = 0


Query: 1   MAVAELSSSLKTELNFSSKTVFQSNR-FSNHRRCSFRPFHRSRSPRVTCSIAPNQVEAAP 60
           MAVAELSSSLKTELNFSS ++F SNR F++HRRCSFRPFHRSR+ RVTCSI  NQVEAAP
Sbjct: 1   MAVAELSSSLKTELNFSSNSLFHSNRFFADHRRCSFRPFHRSRTSRVTCSI--NQVEAAP 60

Query: 61  VAAKTEDPKSKSECYGVFCLTYDLKA---------------------------------- 120
           VAAKTEDPKSKSECYGVFCLTYDLKA                                  
Sbjct: 61  VAAKTEDPKSKSECYGVFCLTYDLKAEEETTSWKKLINISVSGAAGMISNHLLFKLASGE 120

Query: 121 ----------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180
                                   VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG
Sbjct: 121 VFGPDQPIALKLLGSERSFQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIG 180

Query: 181 AKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIP 240
           AKPRGPGMERA LLDINGQIFAEQGKALNAVASPNVKVI+VGNPCNTNALIC+KNAP+IP
Sbjct: 181 AKPRGPGMERAALLDINGQIFAEQGKALNAVASPNVKVIIVGNPCNTNALICLKNAPKIP 240

Query: 241 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEV 300
           AKNFHALTRLDENRAKCQLALKAGVFYD+VSNMTIWGNHSTTQVPDFLNA+INGLPVKEV
Sbjct: 241 AKNFHALTRLDENRAKCQLALKAGVFYDQVSNMTIWGNHSTTQVPDFLNAKINGLPVKEV 300

Query: 301 IKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-- 360
           IKDHRWLEEEFTEKVQKRGG LIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG  
Sbjct: 301 IKDHRWLEEEFTEKVQKRGGVLIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSGVY 360

[Close]

BLAST of Lsi04G001090 vs. TAIR 10
Match: AT5G58330.2 (lactate/malate dehydrogenase family protein )

HSP 1 Score: 506.5 bits (1303), Expect = 1.7e-143
Identity = 285/445 (64.04%), Postives = 309/445 (69.44%), Query Frame = 0


Query: 1   MAVAELSSSLKTE--LNFSSKTVFQSN-RFSNH-RRCSFRPFHRSR-SPRVTCSIAPNQV 60
           MA+AELS+   T   LN SS+    S    SNH R     P H +  + +++CS++ NQ 
Sbjct: 1   MAMAELSTPKTTSPFLNSSSRLRLSSKLHLSNHFRHLLLPPLHTTTPNSKISCSVSQNQ- 60

Query: 61  EAAPVAAKTED-PKSKSECYGVFCLTYDLKA----------------------------- 120
             APVA +     K+K ECYGVFCLTYDLKA                             
Sbjct: 61  --APVAVQENGLVKTKKECYGVFCLTYDLKAEEETRSWKKLINIAVSGAAGMISNHLLFK 120

Query: 121 ---------------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEW 180
                                        VAMELEDSLFPLLREV I  DP EVFQD EW
Sbjct: 121 LASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEW 180

Query: 181 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKN 240
           A+LIGAKPRGPGMERA LLDINGQIFAEQGKALN  ASPNVKV+VVGNPCNTNALIC+KN
Sbjct: 181 AILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNTNALICLKN 240

Query: 241 APRIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300
           AP IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL
Sbjct: 241 APNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300

Query: 301 PVKEVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWF 360
           PVKEVI DH+WLEE FTE VQKRGG LI+KWGRSSAASTAVSIVDAI+SL+TPTPEGDWF
Sbjct: 301 PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWF 360

[Close]

BLAST of Lsi04G001090 vs. TAIR 10
Match: AT5G58330.1 (lactate/malate dehydrogenase family protein )

HSP 1 Score: 504.6 bits (1298), Expect = 6.6e-143
Identity = 284/445 (63.82%), Postives = 308/445 (69.21%), Query Frame = 0


Query: 1   MAVAELSSSLKTE--LNFSSKTVFQSN-RFSNH-RRCSFRPFHRSR-SPRVTCSIAPNQV 60
           MA+AELS+   T   LN SS+    S    SNH R     P H +  + +++CS++ N  
Sbjct: 1   MAMAELSTPKTTSPFLNSSSRLRLSSKLHLSNHFRHLLLPPLHTTTPNSKISCSVSQN-- 60

Query: 61  EAAPVAAKTED-PKSKSECYGVFCLTYDLKA----------------------------- 120
             APVA +     K+K ECYGVFCLTYDLKA                             
Sbjct: 61  SQAPVAVQENGLVKTKKECYGVFCLTYDLKAEEETRSWKKLINIAVSGAAGMISNHLLFK 120

Query: 121 ---------------------------VSVAMELEDSLFPLLREVVISIDPYEVFQDAEW 180
                                        VAMELEDSLFPLLREV I  DP EVFQD EW
Sbjct: 121 LASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEW 180

Query: 181 ALLIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASPNVKVIVVGNPCNTNALICMKN 240
           A+LIGAKPRGPGMERA LLDINGQIFAEQGKALN  ASPNVKV+VVGNPCNTNALIC+KN
Sbjct: 181 AILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNTNALICLKN 240

Query: 241 APRIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300
           AP IPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL
Sbjct: 241 APNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLNARINGL 300

Query: 301 PVKEVIKDHRWLEEEFTEKVQKRGGALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWF 360
           PVKEVI DH+WLEE FTE VQKRGG LI+KWGRSSAASTAVSIVDAI+SL+TPTPEGDWF
Sbjct: 301 PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRSSAASTAVSIVDAIKSLVTPTPEGDWF 360

[Close]

BLAST of Lsi04G001090 vs. TAIR 10
Match: AT5G58330.3 (lactate/malate dehydrogenase family protein )

HSP 1 Score: 481.9 bits (1239), Expect = 4.6e-136
Identity = 243/296 (82.09%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 88  VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQ 147
           VAMELEDSLFPLLREV I  DP EVFQD EWA+LIGAKPRGPGMERA LLDINGQIFAEQ
Sbjct: 39  VAMELEDSLFPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQ 98

Query: 148 GKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPAKNFHALTRLDENRAKCQLALKAG 207
           GKALN  ASPNVKV+VVGNPCNTNALIC+KNAP IPAKNFHALTRLDENRAKCQLALKAG
Sbjct: 99  GKALNKAASPNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAG 158

Query: 208 VFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVIKDHRWLEEEFTEKVQKRGGALIE 267
           VFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVI DH+WLEE FTE VQKRGG LI+
Sbjct: 159 VFYDKVSNMTIWGNHSTTQVPDFLNARINGLPVKEVITDHKWLEEGFTESVQKRGGLLIQ 218

Query: 268 KWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG-----------------------GDG 327
           KWGRSSAASTAVSIVDAI+SL+TPTPEGDWFS+G                       GDG
Sbjct: 219 KWGRSSAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDG 278

Query: 328 DYELVKEVIFDDYLRKRIAKTEAELLAEKRCVAHLTGEGIAVCDL-PEDTMLPGEM 360
           DYELVK+V  DDYLR+RIAK+EAELLAEKRCVAHLTGEGIA CDL P DTMLPGE+
Sbjct: 279 DYELVKDVEIDDYLRQRIAKSEAELLAEKRCVAHLTGEGIAYCDLGPVDTMLPGEV 334

[Close]

BLAST of Lsi04G001090 vs. TAIR 10
Match: AT5G56720.1 (Lactate/malate dehydrogenase family protein )

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 108/272 (39.71%), Postives = 151/272 (55.51%), Query Frame = 0


Query: 87  SVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAGLLDINGQIFAE 146
           +V MEL+DS FPLL+ V+ + +  E  +D    ++IG  PR  GMER  ++  N  I+  
Sbjct: 59  AVKMELQDSAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKA 118

Query: 147 QGKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPAKNFHALTRLDENRAKCQLALKA 206
           Q  AL   AS + KV+VV NP NTNALI  + AP IP +N   LTRLD NRA  QLA K 
Sbjct: 119 QASALERYASDDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKL 178

Query: 207 GVFYDKVSNMTIWGNHSTTQVPDFLNARIN----GLPVKEVIKDHRWLEEEFTEKVQKRG 266
            V    V N+ +WGNHS+TQ PD  +A ++      P+KE++ DH WL+ EF  +VQ+RG
Sbjct: 179 SVPVSSVKNVIVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEVQQRG 238

Query: 267 GALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG--GDGDY-------------- 326
            A++    +SSA S A +  D IR     TP+G W S G   DG Y              
Sbjct: 239 AAVLRARKQSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPVIC 298

Query: 327 -----ELVKEVIFDDYLRKRIAKTEAELLAEK 334
                ++V+ +  D++ R+++  +  EL  EK
Sbjct: 299 EKGSWKIVQGLSIDEFSREKMDDSARELAEEK 330

[Close]

BLAST of Lsi04G001090 vs. TAIR 10
Match: AT1G04410.1 (Lactate/malate dehydrogenase family protein )

HSP 1 Score: 183.0 bits (463), Expect = 4.4e-46
Identity = 110/271 (40.59%), Postives = 148/271 (54.61%), Query Frame = 0


Query: 88  VAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAGLLDINGQIFAEQ 147
           V MEL D+ FPLL+ VV + D  E       A+++G  PR  GMER  ++  N  I+  Q
Sbjct: 54  VKMELIDAAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQ 113

Query: 148 GKALNAVASPNVKVIVVGNPCNTNALICMKNAPRIPAKNFHALTRLDENRAKCQLALKAG 207
             AL   A+PN KV+VV NP NTNALI  + AP IP KN   LTRLD NRA  Q++ +  
Sbjct: 114 AAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLS 173

Query: 208 VFYDKVSNMTIWGNHSTTQVPDFLNARI----NGLPVKEVIKDHRWLEEEFTEKVQKRGG 267
           V    V N+ IWGNHS++Q PD  +A++       PV+E++KD  WL+ EF   VQ+RG 
Sbjct: 174 VPVSDVKNVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGA 233

Query: 268 ALIEKWGRSSAASTAVSIVDAIRSLITPTPEGDWFSSG---------------------G 327
           A+I+    SSA S A S  D IR  +  TPEG + S G                      
Sbjct: 234 AIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCR 293

Query: 328 DGDYELVKEVIFDDYLRKRIAKTEAELLAEK 334
           +GD+ +V+ +  D+  RK++  T  EL  EK
Sbjct: 294 NGDWSIVQGLPIDEVSRKKMDLTAEELKEEK 324

The following BLAST results are available for this feature:

BLAST of Lsi04G001090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48902	5.2e-161	68.34	Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa OX=3879 GN=MDH1 PE...	[more]
P21528	5.0e-156	66.59	Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum OX=3888 PE=1 SV=2	[more]
Q05145	5.1e-148	64.93	Malate dehydrogenase [NADP], chloroplastic OS=Mesembryanthemum crystallinum OX=3...	[more]
Q8H1E2	9.2e-142	63.82	Malate dehydrogenase [NADP], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P52426	1.0e-140	63.55	Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea OX=3562 GN=MDH P...	[more]

BLAST of Lsi04G001090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB64	5.8e-179	76.99	Malate dehydrogenase [NADP], chloroplastic OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BGM0	5.8e-179	76.99	Malate dehydrogenase [NADP], chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034894...	[more]
A0A6J1G116	2.9e-178	75.57	Malate dehydrogenase [NADP], chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0KTH8	3.7e-178	76.77	Malate dehydrogenase [NADP], chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G6...	[more]
A0A6J1HXB5	6.4e-178	75.34	Malate dehydrogenase [NADP], chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lsi04G001090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891999.1	9.1e-187	79.91	malate dehydrogenase [NADP], chloroplastic [Benincasa hispida]	[more]
XP_008446809.1	1.2e-178	76.99	PREDICTED: malate dehydrogenase [NADP], chloroplastic [Cucumis melo] >TYK09237.1...	[more]
XP_023541500.1	2.0e-178	76.26	malate dehydrogenase [NADP], chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022945464.1	5.9e-178	75.57	malate dehydrogenase [NADP], chloroplastic [Cucurbita moschata]	[more]
XP_004142443.1	7.7e-178	76.77	malate dehydrogenase [NADP], chloroplastic [Cucumis sativus] >KGN52229.1 hypothe...	[more]

BLAST of Lsi04G001090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58330.2	1.7e-143	64.04	lactate/malate dehydrogenase family protein	[more]
AT5G58330.1	6.6e-143	63.82	lactate/malate dehydrogenase family protein	[more]
AT5G58330.3	4.6e-136	82.09	lactate/malate dehydrogenase family protein	[more]
AT5G56720.1	1.2e-46	39.71	Lactate/malate dehydrogenase family protein	[more]
AT1G04410.1	4.4e-46	40.59	Lactate/malate dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 78..189 e-value: 4.1E-36 score: 126.2
None	No IPR available	PANTHER	PTHR23382:SF18	MALATE DEHYDROGENASE	coord: 1..68 coord: 87..301
None	No IPR available	PANTHER	PTHR23382:SF18	MALATE DEHYDROGENASE	coord: 300..358
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 84..188 e-value: 2.2E-25 score: 89.4
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	3.90.110.10		coord: 190..339 e-value: 2.1E-37 score: 130.2
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	56327	LDH C-terminal domain-like	coord: 191..357
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 191..300 e-value: 8.4E-23 score: 81.2
IPR010945	Malate dehydrogenase, type 2	PANTHER	PTHR23382	MALATE DEHYDROGENASE	coord: 1..68 coord: 300..358
IPR010945	Malate dehydrogenase, type 2	PANTHER	PTHR23382	MALATE DEHYDROGENASE	coord: 87..301
IPR001252	Malate dehydrogenase, active site	PROSITE	PS00068	MDH	coord: 190..202
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 84..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G001090.1	Lsi04G001090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006108	malate metabolic process
biological_process	GO:0006734	NADH metabolic process
biological_process	GO:0006107	oxaloacetate metabolic process
biological_process	GO:0051775	response to redox state
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0030060	L-malate dehydrogenase activity
molecular_function	GO:0046554	malate dehydrogenase (NADP+) activity
molecular_function	GO:0008746	NAD(P)+ transhydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016615	malate dehydrogenase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor