Lsi03G022910 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G022910
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	KH domain-containing protein
Location	chr03: 33762689 .. 33768538 (-)
RNA-Seq Expression	Lsi03G022910
Synteny	Lsi03G022910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTTTTACCACCTTAAATTTAGCTTCCTTGGAAAGATGCGCCTGTTTGTCCGACACCCTCCACTCCACCTCTTCCCGGTTGTTTTTTCTGATTTATTTTTTTTCTCTCTCAATTATTTCGTTTTACTTTTGTCTCTTACAATTTTGTCTCTGAAACGGTGAATACACAGAACACTACATTGCGTCGGTAAAATTTACGCTCAAAATTTATTATTCCTTATAATTATTGTTCTTTTTTTAAGAAAAAAAGAAAAAAGAAAAAAAAGGGAATTCCCTTCGTTTCTGCAAATTCTCACTCACGACAGACCCCTGACCCTGAATGAGCACCCCTTTCCTTCTCTTTCTTTTCCCTTTATTGGTGCTTCTGCCCTTCTTTTTCTCCCGCATCAACAACACCTGAGAACTCTTATCTTCCTATTCTTTTGTTGGTTCAGATTCCGAATAATTAAAAGAAAGAAAGAAAAAGGCGGAAGCAAGTAATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAAGCAGCGGTGATGCTGACAGGTATCCATCCCAGATTCATTCTTTCATTCTACTCCCAATTAAAAGCAGATGCCATCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTGATCTGTGTGTGGGGTTTGTTTTTTTTTCTTTAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGGTCTACTTTTCATTTTCTTTTCTCTTTACAACTCCACTCTCTCTCACCGCAACTATATTTTCCTGTTTAGATCGCAGCTCCCAAGTTACTCCATGAGAATGAGACTGTTGCCGTCTCTAAAATTGTCTTCCTTTTAAATCTAGTAACTATTCACATATATCTAATCCGAGATTTATATTTCCAAGTCGATTATAACCCCTGTTTTAACCGCATTACCCATAACTTACATGTCCACCACGCATCAGGAAACTCATAATGCATCTTTATGTTTATCATGCTTAATCACATTTCAAGCTTCTAAATGCTTGTTCTGGACTACTCATTATCTACCTTCTCTCCCCCTAAAGTTGGCCATACAATGTGATGATCATATTACTACTAACAGATTTCGTAGAGTAGTACCTTCAATATTTACTTGTTATTTCAATAATTCATTGAAAAAGTTTAGATATTCTTCGTAAAATGCTCTGGCTTAACCATCCTCTCGAGCAGAAAAAATTTTGGTAGATCAGTTTAAGAGTATTAGTAGAGAAATAGTGGAAGTATTATTAGAAATGTAGTTATGTGAGAAGTTTGTTCAAGTTTATGGTTATAAATAGAGTGAGTTTAGGATTTGTAGGCCGAATTTCAGGTATTAGTTTTGTAAGAGAGTGATAGGCCTCTTGAAAGCCTATAACCAATGTAACTTTCTTCGATATTACAATATAAATTCATTTCATATTATCTTATTTCTAATCTCAAGATGATTGCGGTTCCTGTCTATCTCCTCCAAGAAACATACACATCCTTAAAAGATATTTATATTCTTTATCGATCAAATATTCTGATCAGTGGCCAAGAAACTAAGTCGCCACAAAAAGTTCTCTCCCCCAGAAGGACCTCCTCTAACACTTCATTAAGCCATCCCAAGAGTCCGTTTCATTTCAAAAAATCAAATAAGCATCAATGCTTGTCAATTAATTGGTTTACAATCACATTGGATAATGTTATTTGCTTAAAACATATTTAACAATAGCTACTACTAATGCTATTAATCAGTAATCTTCTTCTTCTTCTTCTTTTTTTTTCTTTCTTTCTTTAATCTGTTGAACATAAAAATTCTCACCAAGGAATAAGAAAGTTCGAGATGTGTATTAAAAGTTGGAGTTGGATTTTCACATGAAAATGAAGATGTACAACAGAAAATAAAAAGAAAAAAGACTAAGACTTTTGTGGAAGTCCACTTACCTGTACAGCCCCTCTTACCTATGATAAGAAAAGGGCATAAATATTAATGAAATACGAGGCATGTTGTGCTGGCTAGAGCTTCAGTCCTCTGAAGCATTCAATTACCTTACATAAAAATCTAACTAAATATTCAGAAGCCTACGTTGACAGTAATAGAAATCAAGTCTTCGCCCAATTGATGAATCAGTAACCTGGTATCTACATTTGACTCTGCTAATCCAAGTTATTTACACTATCACATTCTGAACTTCGGAACTCTGGGTTTGTTTTACATATGATAAGTTCCTTTATGTGCAGATATTTGTGCAGGTTTCTGGAATGATGTTCGACCAAAGGTTATAGTGATTTTTCATATGACGAGTTACTTTATGTGCAGAGATTTTGCGGGTTTCTGGAATGATGTCCAACCAAGGATTTAGTGACTTTGAGAGATTACGACATAGAAGTCCTAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTAGCGGCTGGAATGGACTTCCTCAGGAGGTAAGTTTATTTGGACTATTTTTCTGGACTTTTCAATTGTGAATTTGTAAGACTCTTTTGAACAGATCATCAATTGGAAGATTCTGGTGCTTCATGTTTGCTTTTTATTTGGTTGAAACTTTTCCAACTTAAAAATTACCTGCCAGCATCGTTTTAGAGTTATAATAATACCGTCCCTAACTTATTAATGGTTGGCTAAGAAGACTTCAAGTTTGGGAACTTTCTACAATTATATGATCTTTAGCTTCCTTCCTTTTTTTTTTCCTTCTTTTTTTGTGTGTGTGAGTGTGTGTTGTGTATATAGTCTCTTTACTTCACCAAGCTGCTCGCAGAAGTGGTTGTAACTTAGTAATGTACATAAAGCAGGAGTGAATTTGTGCGTGAATCTATCTAACCAGATTGGTAGAGTTTACTTCTATGTCCTGTAGTCTAATCCTCTCTAGGCTGTATATTGAGCAACTCAGGAGCTAATTTGGCAGTTTACTGTGCAGAGCAATTCAACAGAATTGGTTTGGAGAAATATGTTCAAGTTGCTGAAACAAAAGTGTAACAATTATTAGGAAACTATTTACAAGCTTTTGTTTTCAAAGGAAGAAAATTTGTTGTTCTCAAAAATAGGGCACACCACACGCGTGAGACCAAGGTATGGAAAAAAAAACGATTTTTAAGAAACAGTTAAATAAATATGCTTTCACTAAACTTTTGTTTTCGATAAGAAGAAACAAAATACAATTTTTATACACAAACAGCTCCTCTGTTCCTTTTTCTCTCTTTCACACTCCTGTCCCCCTACATATTAATCATGAGCCCGGCTGGATAACATCTTAAGTGATTAAACTTGCAAGTTGTGTAGGGAGTATATCTCATAATATCTGGACCTATAAATAAATATAAAAGGGTTGTGGGAGCTAAAAGGGGTATCTTCATATAGCATTCTTGTTTATTACTTTCAAGCAAGTATCAAAGCTTAAAGTATTTGCTCAAGTCTTTGAATTGTATTGAATAAAATATTTGTTTCTTATTTCTGTATAAAATCTGAGTTGTATTATAATCCTGCTAGCATTCTGCCATTACGTTTTTTTTAAAAGAATAATCAAGTATTGATAACCGTGCAAATATGCTACAGTGCTCATGGTTGTTTAATTTTTGAAGTTAAAGCACCAAAGTTCTCCTTGCTCATAAACATGAAAGAGTAGTATTCCAACATAATAAACTAATACATAGTATCACTGCAACCTGCAAGCTACAACAGGTTTCACAGTGATGTGGAATTGGGGAACTTGTATCGTTTTAATTCTTGAATGACATATTTAGATGCAGTATGCTTATTATCTCTCTGTCTCTCACTGTAATCAGAAACAATTGTTTGTACTTAATATGAAATTGTTTTCTTGGGATCTTGGGAAGGTAATAGAAACTTCCATCTTGTCTTAAACGTTTATCTTGACTTGTAGGCTTTCCAGAAATTTCCCTTAGACAGACTTATTATTATTCTTTAAAAAAAAAAAATTAATTTGGACCACCGATGTCACTTGTTTTTCTTTTCACAGCCAAGGTTAAGTGGGAATCCTGGCATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCGTTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCAAATGTAAGTTCTATAAAGAAGTGTCTCTGTACGTGGTTATTTAAATCTTTGTAAAATGTGGATTACTATAAAACTTCTATTTGTTTTATTTCTTGGATGCCAGTTCAATTTTGTTGGACGGCTTCTTGGACCCAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACCACCGGATGTCGTGTGTATATAAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGTATATTAGGTGAAATGGCTTGATTGCGACACTTGTATAAATTCCTCTCTCTAAGTGACCATTTAAAATTTTTACCATTGGATGTTTCTTATTGTGTTGGATAGTAGTATCTGCTTATGTTTAATATTGAGTTATCTGTTTATACTGTTTTAAACTCTCAAGGAAGAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAATGAACCGCTGCATGTCCTGATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGAGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGTACTGTTTACTTTCCAACCTAGTTCTTATCAAGTTTAATTTGTTTATGACAGAGATGGGTCCAATAGATGATCCATTATTTGTTGCATTCCATTCCACATTTTTTGTGGGTGCATTAACAGTTGATTATATGCAATATGTGTAAAAAGAAACATATCCTTGGGGTGTTAGATTCATATCGGTAGAGAAGGAATTAGAAAAATGAAAGGGATAGGGGTGGTTCAGGCAATTGTTAAAAGTAAAAAAGAAGAGAGAAGAAATAGTTGTCCTTTCCTTGTTTAGAAGCAATTTTTGATTGATGCATGTGCACGCAGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGTCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGAGACCTCACATTACATTCCTGCCCAATACATTTTTCCTCTCTATTATGCAAATTGATCACTGAAATGCCTGCCAACAGGTTAGGGTTCAGAAACTAGCATAACTACAAAATTGGATGGTCAATATTCTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTTTTTTGAGTTTATTTATTATTTATTTTTAAACAACAGAAAGTTAAGAGATGTCTTTTTGTTTTCCTCATTTCTATTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGTGTAGTGAGTAAAGATTGTGTAGTTTTTGTTTGGGGGGTTTCTATCTGGTGAGGTCGTTCTGTCACATAAATTGAATATAATTATTGAATTTATTCTTGTGTTAGTTAGTTTTAAATAGTGTGTAATATTTGATTATAAGACGCAGAATAGGCCGGAGATTTTAGAAGGCGTTGTTGGAGACTGATATATACTATACTGTTTCTTTGATTGTATGTTGGTGACAAATAATATTTTGAGTTGGGAGTTCTCACATTACCCAGGGATTGGAATATATATACATTTATACATATAACTGGGAACCGTCAACCGACTCAAAACCCCACATCCTTTCTATCTGTATATGCAATTGCATGGTACGGGTGTTAACATCTCACATCTCGGG

mRNA sequence

AAATCTTTTACCACCTTAAATTTAGCTTCCTTGGAAAGATGCGCCTGTTTGTCCGACACCCTCCACTCCACCTCTTCCCGGTTGTTTTTTCTGATTTATTTTTTTTCTCTCTCAATTATTTCGTTTTACTTTTGTCTCTTACAATTTTGTCTCTGAAACGGTGAATACACAGAACACTACATTGCGTCGGTAAAATTTACGCTCAAAATTTATTATTCCTTATAATTATTGTTCTTTTTTTAAGAAAAAAAGAAAAAAGAAAAAAAAGGGAATTCCCTTCGTTTCTGCAAATTCTCACTCACGACAGACCCCTGACCCTGAATGAGCACCCCTTTCCTTCTCTTTCTTTTCCCTTTATTGGTGCTTCTGCCCTTCTTTTTCTCCCGCATCAACAACACCTGAGAACTCTTATCTTCCTATTCTTTTGTTGGTTCAGATTCCGAATAATTAAAAGAAAGAAAGAAAAAGGCGGAAGCAAGTAATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAAGCAGCGGTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGAGATTTTGCGGGTTTCTGGAATGATGTCCAACCAAGGATTTAGTGACTTTGAGAGATTACGACATAGAAGTCCTAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTAGCGGCTGGAATGGACTTCCTCAGGAGCCAAGGTTAAGTGGGAATCCTGGCATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCGTTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCAAATTTCAATTTTGTTGGACGGCTTCTTGGACCCAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACCACCGGATGTCGTGTGTATATAAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAGAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAATGAACCGCTGCATGTCCTGATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGAGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGTCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGAGACCTCACATTACATTCCTGCCCAATACATTTTTCCTCTCTATTATGCAAATTGATCACTGAAATGCCTGCCAACAGGTTAGGGTTCAGAAACTAGCATAACTACAAAATTGGATGGTCAATATTCTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTTTTTTGAGTTTATTTATTATTTATTTTTAAACAACAGAAAGTTAAGAGATGTCTTTTTGTTTTCCTCATTTCTATTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGTGTAGTGAGTAAAGATTGTGTAGTTTTTGTTTGGGGGGTTTCTATCTGGTGAGGTCGTTCTGTCACATAAATTGAATATAATTATTGAATTTATTCTTGTGTTAGTTAGTTTTAAATAGTGTGTAATATTTGATTATAAGACGCAGAATAGGCCGGAGATTTTAGAAGGCGTTGTTGGAGACTGATATATACTATACTGTTTCTTTGATTGTATGTTGGTGACAAATAATATTTTGAGTTGGGAGTTCTCACATTACCCAGGGATTGGAATATATATACATTTATACATATAACTGGGAACCGTCAACCGACTCAAAACCCCACATCCTTTCTATCTGTATATGCAATTGCATGGTACGGGTGTTAACATCTCACATCTCGGG

Coding sequence (CDS)

ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCTCAGATTAGAAGCAGCGGTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCCGAGCATCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTTTTAAATCAAGAGATTTTGCGGGTTTCTGGAATGATGTCCAACCAAGGATTTAGTGACTTTGAGAGATTACGACATAGAAGTCCTAGTCCAATGGCTTCTTCTAACCTTGTGTCAAATATTTCTGGCACAGGTTTTAGCGGCTGGAATGGACTTCCTCAGGAGCCAAGGTTAAGTGGGAATCCTGGCATGACAATGGACTGGCAAGGTGCTCCTGCAAGCCCTAGTTCGTTTACTGTAAAGAGGATTTTGCGGTTGGAAATTCCAGTGGACACATATCCAAATTTCAATTTTGTTGGACGGCTTCTTGGACCCAGAGGCAATTCTCTGAAGCGGGTAGAAGCTACCACCGGATGTCGTGTGTATATAAGAGGAAAGGGGTCAATTAAAGATCCAGAGAAGGAAGAGAAACTCCGAGGAAGACTTGGTTATGAACATCTGAATGAACCGCTGCATGTCCTGATTGAGGCTGATTTACCAGCCAATATCATTGATATCAGGCTGAGACAGGCACAAGAAATTATAGAAGAACTACTCAAACCCGTGGACGAGCCAAATGATTATATCAAAAGACAACAATTGCGTGAATTAGCAATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGTCCCAGCGGTAGTGTTTCTCCTTTCAATTCAAGCGGGATGAAGCGTGCAAAAACTGGTCGCTGA

Protein sequence

MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 4.9e-130
Identity = 232/284 (81.69%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MSGLYN-PNFSPARAASPQIRS-SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEI 60
           MSGLYN  NFSP+RAASPQIR+ S D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTM 120
            R++GMM NQGF+DF+RLRHRSPSPMAS NL+SN+SG G  GWNGLP E R+ G  GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180
           +WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPN 240
           GSIKDPEKEEKL+G+ GYEHLNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNSN RE SPGPSGSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 7.0e-129
Identity = 242/287 (84.32%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRSSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF DF+RLRHRSPSPMASSNL+SN+S TG  GWNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.2e-114
Identity = 210/283 (74.20%), Postives = 242/283 (85.51%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSS-GDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEIL 60
           MSGLY+P FSPAR  SPQIRS+  D DSQYL+ELLAEHQKLGPFMQ+LPICS+LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMD 120
           RVS ++ N GF DF+R R RSPSPM+S N  SN SG GFS WNGL QE RL    G +MD
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFPQGTSMD 120

Query: 121 WQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180
           WQGAP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKG
Sbjct: 121 WQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 180

Query: 181 SIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPND 240
           SIKDP KE+KLRG+ GYEHL++PLH+LIEA+ PA+IID RLR AQE+IEELLKPVDE  D
Sbjct: 181 SIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           + KRQQLRELAMLNS  RE+SP P GSVSPF++ GMKRAKTG+
Sbjct: 241 FYKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.6e-75
Identity = 150/276 (54.35%), Postives = 193/276 (69.93%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PNFS    + P          +YLSELLAE  KL PF+ +LP   RL+NQEILRV+ ++
Sbjct: 41  SPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLL 100

Query: 66  SNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGW-NGLPQEPRLSGNPGMTMDWQGAP 125
            N       + R   PSP+AS  +  N S    +GW +  P E  +S +P    +W  +P
Sbjct: 101 ENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNWLNSP 160

Query: 126 ASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 185
            S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP
Sbjct: 161 GSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP 220

Query: 186 EKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQ 245
            KE+ +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL PV+E +D+ K+Q
Sbjct: 221 IKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQ 280

Query: 246 QLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           QLRELA+LN + REE    SGS+SP+NS GMKRAKT
Sbjct: 281 QLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.5e-74
Identity = 147/254 (57.87%), Postives = 183/254 (72.05%), Query Frame = 0


Query: 28  QYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMMSNQGFSDFERLRHRSPSPMASS 87
           +YLSELLAE  KL PF+ +LP   RLLNQEILRV+ ++ N        L H  PSP+AS 
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASG 123

Query: 88  NLVSNISGTGFSGW-NGLPQEPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP 147
            +  N +    +GW +  P E  +  +PG   +W  +P S S    KR +R++IPVD YP
Sbjct: 124 GIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP 183

Query: 148 NFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLRGRLGYEHLNEPLHVL 207
           NFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KEE +RG+ GYEHLNEPLH+L
Sbjct: 184 NFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHIL 243

Query: 208 IEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQLRELAMLNSNFREESPGPSGS 267
           +EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQLRELA+LN   REE    SGS
Sbjct: 244 VEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGS 303

Query: 268 VSPFNSSGMKRAKT 281
           VSP+NS GMKRAKT
Sbjct: 304 VSPYNSLGMKRAKT 312

[Close]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL
Match: A0A6J1DU72 (KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LOC111024049 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 277/282 (98.23%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRSS DADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGF GWNGLPQEPRLSG+ GMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFGGWNGLPQEPRLSGSSGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL
Match: A0A6J1I3I7 (KH domain-containing protein At2g38610-like OS=Cucurbita maxima OX=3661 GN=LOC111470213 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.5e-150
Identity = 271/282 (96.10%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDF+RLRHRSPSPMASSNL+SNISGTGF  WNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPS-GSVSPFNSSGMKRAKTG 282
           IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL
Match: A0A6J1FU50 (KH domain-containing protein At2g38610 OS=Cucurbita moschata OX=3662 GN=LOC111446905 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.5e-150
Identity = 271/282 (96.10%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDF+RLRHRSPSPMASSNL+SNISGTGF  WNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPS-GSVSPFNSSGMKRAKTG 282
           IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL
Match: A0A6J1IZS3 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481428 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.0e-147
Identity = 264/282 (93.62%), Postives = 269/282 (95.39%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRSS DADS YLSELLAEH KLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSHYLSELLAEHHKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           +SGMMSNQGFSD ERLR RSPSPM SSNLVSN+SG GF GWNGLPQE  LSGNPGMTMDW
Sbjct: 61  ISGMMSNQGFSDLERLRQRSPSPMPSSNLVSNVSGAGFGGWNGLPQEQMLSGNPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILQLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDP+KEEKL GRLGYEHLNEPLHVLIEADLP NI+DIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPDKEEKLHGRLGYEHLNEPLHVLIEADLPPNIVDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSN REESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNLREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL
Match: A0A7N2M4V9 (KH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.6e-145
Identity = 259/282 (91.84%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQ+LPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSNPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDF+RLRHRSPSPMASSNL+S+++GTG  GWNGLPQE RLSG PGMTMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLISSVTGTGLGGWNGLPQE-RLSGPPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSS+TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDP+KEEKLRGR GYEHLNEPLH+LIEADLPAN++DIRLRQAQEIIEELLKPVDE  D+
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDF 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGS+SPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSISPFNSSGMKRAKTGR 281

[Close]

BLAST of Lsi03G022910 vs. NCBI nr
Match: XP_038905002.1 (KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida])

HSP 1 Score: 559.7 bits (1441), Expect = 1.4e-155
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDFERLRHRSPSPMAS+NLVSNISGTGF GWNGLPQEPRLSGNPGMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASTNLVSNISGTGFGGWNGLPQEPRLSGNPGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Lsi03G022910 vs. NCBI nr
Match: XP_004137670.3 (KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetical protein Csa_001075 [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154
Identity = 278/282 (98.58%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 70  MSGLYNPNFSPARAASPQIRTSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 129

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFS+FERLRHRSPSPMASSNLVSNISGTGF  WNGLPQEPRLSGNPGMTMDW
Sbjct: 130 VSGMMSNQGFSEFERLRHRSPSPMASSNLVSNISGTGFGSWNGLPQEPRLSGNPGMTMDW 189

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 190 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 249

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 250 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 309

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 310 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 351

[Close]

BLAST of Lsi03G022910 vs. NCBI nr
Match: XP_022157317.1 (KH domain-containing protein At3g08620-like [Momordica charantia])

HSP 1 Score: 552.0 bits (1421), Expect = 3.0e-153
Identity = 277/282 (98.23%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRSS DADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGF GWNGLPQEPRLSG+ GMTMDW
Sbjct: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFGGWNGLPQEPRLSGSSGMTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKRILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Lsi03G022910 vs. NCBI nr
Match: XP_022941600.1 (KH domain-containing protein At2g38610 [Cucurbita moschata] >XP_022971516.1 KH domain-containing protein At2g38610-like [Cucurbita maxima] >XP_023539745.1 KH domain-containing protein At2g38610-like [Cucurbita pepo subsp. pepo] >KAG6596299.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027851.1 KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 271/282 (96.10%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPIC RLLNQEILR
Sbjct: 1   MSGLYNPNFSPARAASPQIRTSADADSQYLSELLAEHQKLGPFMQILPICKRLLNQEILR 60

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSDF+RLRHRSPSPMASSNL+SNISGTGF  WNGLPQEPRLSGNPG TMDW
Sbjct: 61  VSGMMSNQGFSDFDRLRHRSPSPMASSNLMSNISGTGFGSWNGLPQEPRLSGNPGTTMDW 120

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVK+ILRLEIPV+TYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 121 QGAPASPSSFTVKKILRLEIPVETYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240

Query: 241 IKRQQLRELAMLNSNFREESPGPS-GSVSPFNSSGMKRAKTG 282
           IKRQQLRELAMLNSNFREESPGPS GSVSPFNSSGMKRAKTG
Sbjct: 241 IKRQQLRELAMLNSNFREESPGPSGGSVSPFNSSGMKRAKTG 282

[Close]

BLAST of Lsi03G022910 vs. NCBI nr
Match: KAG7017179.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 266/282 (94.33%), Postives = 268/282 (95.04%), Query Frame = 0


Query: 1   MSGLYNPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILR 60
           MSGLYNPNFSPARAASPQIRSS DADS YLSELLAEH KLGPFMQILPICSRLLNQEILR
Sbjct: 38  MSGLYNPNFSPARAASPQIRSSADADSHYLSELLAEHHKLGPFMQILPICSRLLNQEILR 97

Query: 61  VSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTMDW 120
           VSGMMSNQGFSD ERLR RSPSPM SSNLVSN SG GF GWNGLPQE  LSGNPGMTMDW
Sbjct: 98  VSGMMSNQGFSDLERLRQRSPSPMPSSNLVSNASGAGFGGWNGLPQEQMLSGNPGMTMDW 157

Query: 121 QGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 180
           QGAPASPSSFTVKRIL+LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS
Sbjct: 158 QGAPASPSSFTVKRILQLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGS 217

Query: 181 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDY 240
           IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLP N +DIRLRQAQEIIEELLKPVDEPNDY
Sbjct: 218 IKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPPNTVDIRLRQAQEIIEELLKPVDEPNDY 277

Query: 241 IKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           IKRQQLRELAMLNSN REESPGPSGSVSPFNSSGMKRAKTGR
Sbjct: 278 IKRQQLRELAMLNSNLREESPGPSGSVSPFNSSGMKRAKTGR 319

[Close]

BLAST of Lsi03G022910 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 465.3 bits (1196), Expect = 3.5e-131
Identity = 232/284 (81.69%), Postives = 257/284 (90.49%), Query Frame = 0


Query: 1   MSGLYN-PNFSPARAASPQIRS-SGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEI 60
           MSGLYN  NFSP+RAASPQIR+ S D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMTM 120
            R++GMM NQGF+DF+RLRHRSPSPMAS NL+SN+SG G  GWNGLP E R+ G  GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180
           +WQGAPASPSS+ VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPN 240
           GSIKDPEKEEKL+G+ GYEHLNE LH+LIEADLP +I+DI+LRQAQEIIEEL+KPVDE  
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNSN RE SPGPSGSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Lsi03G022910 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-130
Identity = 242/287 (84.32%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRSSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF DF+RLRHRSPSPMASSNL+SN+S TG  GWNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Lsi03G022910 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-130
Identity = 242/287 (84.32%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MSGLYNPN--FSPARAASPQIRSSGDAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQE 60
           MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGWNGLPQEPRLSGNPGMT 120
           + RVSGMMSNQGF DF+RLRHRSPSPMASSNL+SN+S TG  GWNGL QE RLSG PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQGAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRG 180
           MDWQGAP SPSS+TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPEKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEP 240
           KGSIKDPEKE+KLRGR GYEHLNE LH+LIEADLPA+I++IRLRQAQEIIEELLKPVDE 
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 NDYIKRQQLRELAMLNS-NFREESPGPS--GSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS N REESPGPS  GSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Lsi03G022910 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.4e-76
Identity = 150/276 (54.35%), Postives = 193/276 (69.93%), Query Frame = 0


Query: 6   NPNFSPARAASPQIRSSGDADSQYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMM 65
           +PNFS    + P          +YLSELLAE  KL PF+ +LP   RL+NQEILRV+ ++
Sbjct: 41  SPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLL 100

Query: 66  SNQGFSDFERLRHRSPSPMASSNLVSNISGTGFSGW-NGLPQEPRLSGNPGMTMDWQGAP 125
            N       + R   PSP+AS  +  N S    +GW +  P E  +S +P    +W  +P
Sbjct: 101 ENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNWLNSP 160

Query: 126 ASPSSFTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 185
            S S   VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP
Sbjct: 161 GSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP 220

Query: 186 EKEEKLRGRLGYEHLNEPLHVLIEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQ 245
            KE+ +RG+ GYEHLNEPLH+L+EA+LP  I+D RL QA+EI+++LL PV+E +D+ K+Q
Sbjct: 221 IKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQ 280

Query: 246 QLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKT 281
           QLRELA+LN + REE    SGS+SP+NS GMKRAKT
Sbjct: 281 QLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Lsi03G022910 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 278.9 bits (712), Expect = 4.6e-75
Identity = 147/254 (57.87%), Postives = 183/254 (72.05%), Query Frame = 0


Query: 28  QYLSELLAEHQKLGPFMQILPICSRLLNQEILRVSGMMSNQGFSDFERLRHRSPSPMASS 87
           +YLSELLAE  KL PF+ +LP   RLLNQEILRV+ ++ N        L H  PSP+AS 
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASG 123

Query: 88  NLVSNISGTGFSGW-NGLPQEPRLSGNPGMTMDWQGAPASPSSFTVKRILRLEIPVDTYP 147
            +  N +    +GW +  P E  +  +PG   +W  +P S S    KR +R++IPVD YP
Sbjct: 124 GIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDIPVDNYP 183

Query: 148 NFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLRGRLGYEHLNEPLHVL 207
           NFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KEE +RG+ GYEHLNEPLH+L
Sbjct: 184 NFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHIL 243

Query: 208 IEADLPANIIDIRLRQAQEIIEELLKPVDEPNDYIKRQQLRELAMLNSNFREESPGPSGS 267
           +EA+LP  I+D RL QA+EI+++LL P++E +D  K+QQLRELA+LN   REE    SGS
Sbjct: 244 VEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGS 303

Query: 268 VSPFNSSGMKRAKT 281
           VSP+NS GMKRAKT
Sbjct: 304 VSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Lsi03G022910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYR4	4.9e-130	81.69	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	7.0e-129	84.32	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q75GR5	2.2e-114	74.20	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	7.6e-75	54.35	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	6.5e-74	57.87	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Lsi03G022910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU72	1.5e-153	98.23	KH domain-containing protein At3g08620-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1I3I7	7.5e-150	96.10	KH domain-containing protein At2g38610-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FU50	7.5e-150	96.10	KH domain-containing protein At2g38610 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IZS3	6.0e-147	93.62	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A7N2M4V9	5.6e-145	91.84	KH domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lsi03G022910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905002.1	1.4e-155	99.29	KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]	[more]
XP_004137670.3	2.1e-154	98.58	KH domain-containing protein At3g08620 [Cucumis sativus] >KGN58951.2 hypothetica...	[more]
XP_022157317.1	3.0e-153	98.23	KH domain-containing protein At3g08620-like [Momordica charantia]	[more]
XP_022941600.1	1.6e-149	96.10	KH domain-containing protein At2g38610 [Cucurbita moschata] >XP_022971516.1 KH d...	[more]
KAG7017179.1	1.2e-146	94.33	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Lsi03G022910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08620.1	3.5e-131	81.69	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	5.0e-130	84.32	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	5.0e-130	84.32	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	5.4e-76	54.35	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	4.6e-75	57.87	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 132..232 e-value: 1.6E-6 score: 37.7
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 149..187 e-value: 2.1E-5 score: 24.2
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 25..72 e-value: 8.5E-14 score: 50.9
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 20..263 e-value: 2.3E-69 score: 235.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..282
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..282
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 149..206 score: 8.428877
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 137..257 e-value: 2.59566E-54 score: 170.117
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022910.1	Lsi03G022910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding