Lsi03G022750 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G022750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Non-specific lipid-transfer protein
Location	chr03: 33666158 .. 33667304 (+)
RNA-Seq Expression	Lsi03G022750
Synteny	Lsi03G022750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAGTTGTGGAGTGTGGAGTATGGAGTGAAGTGAAGATTCAACTACCACCAAACCTCATAATAAATGCATGGGATGGGATAGAGTGTGATGAGTGGGCTATATAAAGGGCGGCACACGGAGGGGTTTGATCCACAAAGACACACACAGAGAGAGAGAGAGAGAGCAAGAGAAGCAAAAGGGAAAGAAGCAGAAGCAGAAGCATATATTAAAAAATGGAGATGGAGAGGAACATGAAGGTTTTGATGATTGTGGGGGTTGTGATGATGATGATGGTGGTGGGTGAAGCGACTGTGACCTGCGGGACAGTGGCTAGCGCGGTCTCATCTTGCATCCCATATTTGAAAGGCCAATCACCAACCATCCCTCCAGCATGTTGCAGTGGGATTAGGTCCCTCAACGCCCAAGCCTCCACCCCTGCCGATCGCCAAACCGCTTGCAAATGCTTGAAGTCTGCTGCCGGTAGCATCTCCGGCATCAACTATGGCTCTGCCGCTGGCCTTCCCGGCAAGTGCGGCGTCAACATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAAGTATGTATTATTGTTATTATTATTATTCCATAGCTTCTACTACTTTTCTTTTCCATCATCGGTTTTCTAATTGTTTCTCATGCCTTTTGGGTTTGGTTGCAGGGTGAACTGAGGATCCAGCTCTGCCTACGCGTACTACTACTACTACTACTACTACTCAATAATATTATTATTATTAATTATTAGTGGTAGCTTTAGGTAGCTTTAAATTAAATACCAGATCAATGCTGAGTATGAATAAACAGCATGGGTGCTTTCTTCTTTAATTCCCATGCCCATGCCCATCTTCATCTTCTTCTTCTTCTTTAGTTTCTATTTTCTGGTACTGTTGTTGTGTGTATGAGATTCCAATGACTCCTCTCATTGTGAATTCCAATATAAATTTAATAAACTATTTCCTCATTTTCTACTACTCATACTCTTAATTAATTTTCCCTCTTCTTCTACTCTTCCGACCACTACTACTTTTGATTACTCTTATCATATCATTTTAATACTTTCTGACAAAGTAAAAGAACAAAATGAAAAATTAACAAAACCCACTCATTATAAACCCACCCGCAACCTCCAATGCACAACATTCCAG

mRNA sequence

TCCAGTTGTGGAGTGTGGAGTATGGAGTGAAGTGAAGATTCAACTACCACCAAACCTCATAATAAATGCATGGGATGGGATAGAGTGTGATGAGTGGGCTATATAAAGGGCGGCACACGGAGGGGTTTGATCCACAAAGACACACACAGAGAGAGAGAGAGAGAGCAAGAGAAGCAAAAGGGAAAGAAGCAGAAGCAGAAGCATATATTAAAAAATGGAGATGGAGAGGAACATGAAGGTTTTGATGATTGTGGGGGTTGTGATGATGATGATGGTGGTGGGTGAAGCGACTGTGACCTGCGGGACAGTGGCTAGCGCGGTCTCATCTTGCATCCCATATTTGAAAGGCCAATCACCAACCATCCCTCCAGCATGTTGCAGTGGGATTAGGTCCCTCAACGCCCAAGCCTCCACCCCTGCCGATCGCCAAACCGCTTGCAAATGCTTGAAGTCTGCTGCCGGTAGCATCTCCGGCATCAACTATGGCTCTGCCGCTGGCCTTCCCGGCAAGTGCGGCGTCAACATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAAGGTGAACTGAGGATCCAGCTCTGCCTACGCGTACTACTACTACTACTACTACTACTCAATAATATTATTATTATTAATTATTAGTGGTAGCTTTAGGTAGCTTTAAATTAAATACCAGATCAATGCTGAGTATGAATAAACAGCATGGGTGCTTTCTTCTTTAATTCCCATGCCCATGCCCATCTTCATCTTCTTCTTCTTCTTTAGTTTCTATTTTCTGGTACTGTTGTTGTGTGTATGAGATTCCAATGACTCCTCTCATTGTGAATTCCAATATAAATTTAATAAACTATTTCCTCATTTTCTACTACTCATACTCTTAATTAATTTTCCCTCTTCTTCTACTCTTCCGACCACTACTACTTTTGATTACTCTTATCATATCATTTTAATACTTTCTGACAAAGTAAAAGAACAAAATGAAAAATTAACAAAACCCACTCATTATAAACCCACCCGCAACCTCCAATGCACAACATTCCAG

Coding sequence (CDS)

ATGGAGATGGAGAGGAACATGAAGGTTTTGATGATTGTGGGGGTTGTGATGATGATGATGGTGGTGGGTGAAGCGACTGTGACCTGCGGGACAGTGGCTAGCGCGGTCTCATCTTGCATCCCATATTTGAAAGGCCAATCACCAACCATCCCTCCAGCATGTTGCAGTGGGATTAGGTCCCTCAACGCCCAAGCCTCCACCCCTGCCGATCGCCAAACCGCTTGCAAATGCTTGAAGTCTGCTGCCGGTAGCATCTCCGGCATCAACTATGGCTCTGCCGCTGGCCTTCCCGGCAAGTGCGGCGTCAACATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCCAAGGTGAACTGA

Protein sequence

MEMERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN

Homology

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BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot
Match: E6Y8S8 (Non-specific lipid-transfer protein OS=Apium graveolens OX=4045 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26
Identity = 62/115 (53.91%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 8   KVLMIVGVVMMMMVVGEATV----TCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNA 67
           KV + V V++M++V+    V    TCG V   +  C+ YLKG      PACC G++ LN+
Sbjct: 5   KVAIAVAVMLMVVVINHPAVVEGLTCGQVTGKLGGCLGYLKGGGYP-SPACCGGVKGLNS 64

Query: 68  QASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
            A TPADR+ AC CLK+ AGS+ GINYG+A+ LPGKCG+ IPY ISPSTDCS+VN
Sbjct: 65  LAKTPADRKQACACLKTLAGSVKGINYGAASALPGKCGIRIPYPISPSTDCSRVN 118

[Close]

BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot
Match: Q42762 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 10  LMIVGVVMMMMVVG----EATVTCGTVASAVSSCIPYLKGQ-SPTIPPACCSGIRSLNAQ 69
           L +  VV++ MVVG    +  VT G V ++++ CI YL+G  +  +PP CC+GI+SLN+ 
Sbjct: 3   LKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSA 62

Query: 70  ASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
           A T   RQ AC+C+KSAA  I+GIN+G A+GLPGKCGVNIPYKISPSTDC+ V
Sbjct: 63  AQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 115

[Close]

BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot
Match: Q43129 (Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 10  LMIVGVVMMMMVVG----EATVTCGTVASAVSSCIPYLKGQ-SPTIPPACCSGIRSLNAQ 69
           L +  VV++ MVVG    +  VT G V ++++ CI YL+G  +  +PP CC+GI+SLN+ 
Sbjct: 7   LKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSA 66

Query: 70  ASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
           A T   RQ AC+C+KSAA  I+GIN+G A+GLPGKCGVNIPYKISPSTDC+ V
Sbjct: 67  AQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSV 119

[Close]

BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot
Match: A0A2J6KL39 (Non-specific lipid-transfer protein Lac s 1 OS=Lactuca sativa OX=4236 GN=LSAT_1X82001 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26
Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 10  LMIVGVVMMMMVVG----EATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQA 69
           +MI+ VV+  MVV     EA ++CG V + ++ C+ YL+     +PPACC+G+RSLN+ A
Sbjct: 6   MMILCVVLTCMVVATPYTEAAISCGQVTANLAGCLNYLR-NGGAVPPACCNGVRSLNSAA 65

Query: 70  STPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
            +  DR+TAC CLK+A+ S+SGI   +AAGLPGKCGVNIPY+ISP+TDCSKV
Sbjct: 66  KSTPDRKTACNCLKNASKSVSGIKAANAAGLPGKCGVNIPYQISPNTDCSKV 116

[Close]

BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 12  IVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPADR 71
           +V +V++     EA ++CG VASA++ CI Y +GQ       CCSG+RSLN  A T ADR
Sbjct: 14  VVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADR 73

Query: 72  QTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           + AC CLK+AA  +SG+N G+AA +P KCGV+IPY IS STDCS+VN
Sbjct: 74  RAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120

[Close]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 83/116 (71.55%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLN 62
           MER+MK+ ++VGVV+M MVVGEA ++CGTVAS+V+ CIPYL+  S  +P ACCSGIRSLN
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 63  AQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           +QAST ADR+TAC CLKSAA S+SGINY +A+ LP KCGV+IPYKISPSTDC+KVN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLN 62
           MER+MK+ +IVGVV+M MVVGEA ++CGTVA +VS CI YLK  S  +P ACC+GIRSLN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 63  AQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           +QAST  DR+TAC CLKSAA SISGIN+ +A+ LP KCGV+IPYKISPSTDCSKVN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.4e-35
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVV-GEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSL 62
           ME  +K LMIVG+VMM MVV GEA VTCG+VA+A+  CIPYL+  S ++P  CCSGIRSL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 63  NAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           N QA+T ADR+TAC CLKSAA SISGINY +AAGLPGKCGV+I Y ISP+TDCS+VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL
Match: A0A1S3B5F4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.4e-35
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVV-GEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSL 62
           ME  +K LMIVG+VMM MVV GEA VTCG+VA+A+  CIPYL+  S ++P  CCSGIRSL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 63  NAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           N QA+T ADR+TAC CLKSAA SISGINY +AAGLPGKCGV+I Y ISP+TDCS+VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL
Match: A0A0A0LF44 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.8e-31
Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 3   MERNMKVLMIVGVV----MMMMVVGEAT-VTCGTVASAVSSCIPYLKGQSPTIPPACCSG 62
           ME  +K LMIVG+V    M M+V GEA  +TCG VAS+VS CI YL+     +P  CC+G
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 63  IRSLNAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 119
           IRSLN+QAST  DR+ AC CLK+AAGSI GINYG+AA LP KCGV++PYKISPSTDC+KV
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120

[Close]

BLAST of Lsi03G022750 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 8.8e-38
Identity = 83/116 (71.55%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLN 62
           MER+MK+ ++VGVV+M MVVGEA ++CGTVAS+V+ CIPYL+  S  +P ACCSGIRSLN
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 63  AQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           +QAST ADR+TAC CLKSAA S+SGINY +A+ LP KCGV+IPYKISPSTDC+KVN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Lsi03G022750 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLN 62
           MER+MK+ +IVGVV+M MVVGEA ++CGTVA +VS CI YLK  S  +P ACC+GIRSLN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 63  AQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           +QAST  DR+TAC CLKSAA SISGIN+ +A+ LP KCGV+IPYKISPSTDCSKVN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Lsi03G022750 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-36
Identity = 81/116 (69.83%), Postives = 97/116 (83.62%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLN 62
           MER+MK+ +IVGVV+M MVVGEA +TCG VAS+V+ CIPYLK  S  +P ACC+GIRSLN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAITCGAVASSVAPCIPYLKNPSSGVPAACCNGIRSLN 60

Query: 63  AQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           +QAST  DR+TAC CLKSAA SI GIN+ +A+ LP +CGV IPYKISPSTDC+KVN
Sbjct: 61  SQASTSVDRRTACTCLKSAASSIPGINFNAASSLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Lsi03G022750 vs. NCBI nr
Match: XP_038902996.1 (non-specific lipid-transfer protein 1-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-36
Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 1   MEMERNMKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRS 60
           MEMER+MKV+MIVGVVMM MVV EA ++CG VA AV  CI YLK  +   PPACC+G+R+
Sbjct: 1   MEMERSMKVMMIVGVVMMCMVVSEAAISCGAVAGAVGPCIGYLKAPTGIPPPACCNGVRN 60

Query: 61  LNAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           L +QASTPADR+ AC CLK+AA SI GI+ G+AAGLP KCGV+IPYKISP+TDC+KVN
Sbjct: 61  LKSQASTPADRRAACYCLKNAANSIRGIDVGAAAGLPSKCGVSIPYKISPNTDCTKVN 118

[Close]

BLAST of Lsi03G022750 vs. NCBI nr
Match: XP_008442324.1 (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo] >TYK24911.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 9.1e-35
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 3   MERNMKVLMIVGVVMMMMVV-GEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSL 62
           ME  +K LMIVG+VMM MVV GEA VTCG+VA+A+  CIPYL+  S ++P  CCSGIRSL
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 63  NAQASTPADRQTACKCLKSAAGSISGINYGSAAGLPGKCGVNIPYKISPSTDCSKVN 119
           N QA+T ADR+TAC CLKSAA SISGINY +AAGLPGKCGV+I Y ISP+TDCS+VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Lsi03G022750 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 24  EATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPADRQTACKCLKSAAG 83
           +A ++CGTVA +++ C  YL  +   +PP+CC+G+++LN+ A T  DRQ AC+C++S A 
Sbjct: 22  DAAISCGTVAGSLAPCATYL-SKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAK 81

Query: 84  SISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
           SISG+N   A+GLPGKCGV+IPY IS ST+C+ +
Sbjct: 82  SISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Lsi03G022750 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-22
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 24  EATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPADRQTACKCLKSAAG 83
           +A +TCGTVAS++S C+ YL  +   +PP CC+G++ LN  A T  DRQ AC+CL+SAA 
Sbjct: 22  DAAITCGTVASSLSPCLGYL-SKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA- 81

Query: 84  SISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
              G+N   A+GLPGKCGV+IPY IS ST+C+ +
Sbjct: 82  --KGVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of Lsi03G022750 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-20
Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 10  LMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPA 69
           L++  +++   +   A ++CG+V S +++CI Y+  Q   IPPACCSG+++LN+ A T  
Sbjct: 10  LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVL-QGGVIPPACCSGVKNLNSIAKTTP 69

Query: 70  DRQTACKCLKSAAGSI-SGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
           DRQ AC C++ AA ++ SG+N G AAG+P  CGVNIPYKIS ST+C  V
Sbjct: 70  DRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of Lsi03G022750 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 24  EATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQASTPADRQTACKCLKSAAG 83
           EA ++C  V + +  C+ Y+  Q   IP +CC+GIR L+ QA++ +D+Q  C+C+KS  G
Sbjct: 21  EAAISCNAVQANLYPCVVYVV-QGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVG 80

Query: 84  --SISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
             S S I    AA LPGKCGV +PYKI PST+C+ +
Sbjct: 81  RVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSI 115

[Close]

BLAST of Lsi03G022750 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 7   MKVLMIVGVVMMMMVVGEATVTCGTVASAVSSCIPYLKGQSPTIPPACCSGIRSLNAQAS 66
           M+ L++   +++ +  GEA V+C TV + +  C+ Y+    P +P  CC+G+ +L +QA 
Sbjct: 1   MRSLLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGP-VPTLCCNGLTTLKSQAQ 60

Query: 67  TPADRQTACKCLKSAAG--SISGINYGSAAGLPGKCGVNIPYKISPSTDCSKV 118
           T  DRQ  C+C+KSA G  ++S     +A  LP KCGV++PYK SPSTDC  +
Sbjct: 61  TSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSI 112

The following BLAST results are available for this feature:

BLAST of Lsi03G022750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E6Y8S8	2.7e-26	53.91	Non-specific lipid-transfer protein OS=Apium graveolens OX=4045 PE=1 SV=1	[more]
Q42762	3.6e-26	55.75	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]
Q43129	3.6e-26	55.75	Non-specific lipid-transfer protein OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
A0A2J6KL39	3.6e-26	55.36	Non-specific lipid-transfer protein Lac s 1 OS=Lactuca sativa OX=4236 GN=LSAT_1X...	[more]
P19656	3.6e-26	54.21	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]

BLAST of Lsi03G022750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IX25	4.2e-38	71.55	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]
A0A6J1F9Q5	1.4e-36	71.55	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11144208...	[more]
A0A5D3DMS3	4.4e-35	70.94	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B5F4	4.4e-35	70.94	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3...	[more]
A0A0A0LF44	3.8e-31	64.46	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 P...	[more]

BLAST of Lsi03G022750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982607.1	8.8e-38	71.55	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_022935125.1	2.8e-36	71.55	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]
XP_023528122.1	8.2e-36	69.83	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038902996.1	8.2e-36	69.49	non-specific lipid-transfer protein 1-like [Benincasa hispida]	[more]
XP_008442324.1	9.1e-35	70.94	PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo] >TYK24911.1...	[more]

BLAST of Lsi03G022750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59320.1	2.9e-23	51.06	lipid transfer protein 3	[more]
AT5G59310.1	1.4e-22	53.19	lipid transfer protein 4	[more]
AT2G38540.1	1.0e-20	47.71	lipid transfer protein 1	[more]
AT5G01870.1	1.1e-17	45.83	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	4.1e-17	40.71	lipid transfer protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 28..44 score: 46.7 coord: 49..63 score: 45.44 coord: 87..104 score: 56.84 coord: 105..116 score: 63.33 coord: 70..85 score: 60.58
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 2..115
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 96..117
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 29..114 e-value: 9.8E-15 score: 64.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 29..114 e-value: 4.1E-10 score: 40.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 26..118 e-value: 1.8E-32 score: 113.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..117
None	No IPR available	PANTHER	PTHR33076:SF76	NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED	coord: 2..115
None	No IPR available	CDD	cd01960	nsLTP1	coord: 27..115 e-value: 2.16952E-41 score: 130.162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022750.1	Lsi03G022750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008289	lipid binding