Homology
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match:
Q9LXF2 (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=2)
HSP 1 Score: 341.7 bits (875), Expect = 1.7e-92
Identity = 182/495 (36.77%), Postives = 299/495 (60.40%), Query Frame = 0
Query: 4 PKL-HRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMD 63
PKL +++ L+Q A +V GL +++ ++ +LI +SLS G+L +AH LF E
Sbjct: 16 PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75
Query: 64 DSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQC 123
D ICN ++R + S+ P K + +Y M++ V D +T+ FVLKAC+ K +++
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACS---KLEWRSN-- 135
Query: 124 FGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSW 183
G H +V++ G + +++N+L+L ++ CG + A +F++ V+W
Sbjct: 136 ---------GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195
Query: 184 NIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVV 243
+ M S Y + A L + MP + ++WN ++ ++ + +AR++F+ E+DVV
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 255
Query: 244 SWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIH-ES 303
+WN++I+GYVN K AL +F M+ + VT +S+L ACA +G LE GK++H
Sbjct: 256 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 315
Query: 304 LKEKHYRIEGYLG----NAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGH 363
L+ Y+G NA++DMY+KCG + A+EVF ++ + +S WN +I+GLA+H H
Sbjct: 316 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 375
Query: 364 CERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKH 423
E ++EMF+ M + PN VTFI +++ACSH G V EGR +F+LM Y I P++KH
Sbjct: 376 AEGSIEMFEEM--QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 435
Query: 424 YGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELE 483
YGCM+D+L R G L+EA++ +++ +++WRTLLGAC+++ +VELG+ + +L +
Sbjct: 436 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 493
Query: 484 PGKDGDYVLLSNIYA 493
+ GDYVLLSNIYA
Sbjct: 496 KDESGDYVLLSNIYA 493
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match:
O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)
HSP 1 Score: 335.1 bits (858), Expect = 1.6e-90
Identity = 181/492 (36.79%), Postives = 276/492 (56.10%), Query Frame = 0
Query: 8 RLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPS-GSLPHAHALFQETSMDDSFI 67
R S+ E++QA AF++K GL + +KL+AF++ +P ++ +AH++ + F
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 68 CNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGHD 127
N++IRAY+NS P AL ++ M V D +++ FVLKACA E
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167
Query: 128 IISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNIMM 187
G +IH +K GL D ++N+L+ +Y G AR V + M VR VSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227
Query: 188 SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSWNS 247
SAY A L + M + NV SWN +++ Y + A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287
Query: 248 IIAGYVNVKDYKGALELFYSMKQSEITATE-VTFISILGACAEMGALEIGKKIHESLKEK 307
++ Y +V Y LE+F M + T +S+L ACA +G+L G+ +H + +
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347
Query: 308 HYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMF 367
IEG+L A+VDMYSKCG++ ALEVF + VS WN++I L+VHG + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407
Query: 368 DSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLL 427
M ++ KPN +TFI +L AC+H G++ + R F +M + Y++ P ++HYGCM+DLL
Sbjct: 408 SEM--VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467
Query: 428 SRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGDYV 487
R G ++EA ++ P S+L +LLGAC+ +E E RL EL Y
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 523
Query: 488 LLSNIYAEEERF 498
+SN+YA + R+
Sbjct: 528 QMSNLYASDGRW 523
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 5.1e-89
Identity = 185/525 (35.24%), Postives = 288/525 (54.86%), Query Frame = 0
Query: 6 LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
L + +++ +++Q A I++ L + I KLI+ SL +L A +F + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 85
Query: 66 ICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGH 125
+CN++IRA++ + P +A +++ MQR + +D+FTY F+LKAC+ G
Sbjct: 86 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------------GQ 145
Query: 126 DIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCG-------LVVF------------ 185
+ +H + KLGL D ++ N+L+ YS CG + +F
Sbjct: 146 SWLP-VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 205
Query: 186 --------------ARLVFNEMTVRSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVIS 245
AR +F+EM R ++SWN M+ Y R + A L E MP+ N +S
Sbjct: 206 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 265
Query: 246 WNTVLARYIRLNNLVAARKVFEEM--PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQS 305
W+T++ Y + ++ AR +F++M P ++VV+W IIAGY K A L M S
Sbjct: 266 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 325
Query: 306 EITATEVTFISILGACAEMGALEIGKKIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLA 365
+ ISIL AC E G L +G +IH LK + Y+ NA++DMY+KCG L+ A
Sbjct: 326 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 385
Query: 366 LEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEHDDHKPNRVTFIALLIACS 425
+VFN++ K + WN M+ GL VHGH + A+E+F M+ E +P++VTFIA+L +C+
Sbjct: 386 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKVTFIAVLCSCN 445
Query: 426 HKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLW 485
H GL+ EG +F M Y ++P ++HYGC++DLL R G L+EA +++T P V+W
Sbjct: 446 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 505
Query: 486 RTLLGACRVHRHVELGEESFRRLAELEPGKDGDYVLLSNIYAEEE 496
LLGACR+H V++ +E L +L+P G+Y LLSNIYA E
Sbjct: 506 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match:
Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)
HSP 1 Score: 325.9 bits (834), Expect = 9.5e-88
Identity = 180/489 (36.81%), Postives = 280/489 (57.26%), Query Frame = 0
Query: 6 LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
L+ +++ L Q +K G+ KLI ++S S +LP+A L D+F
Sbjct: 12 LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAF 71
Query: 66 ICNTMIRAYSNSVFPVKALLIYNHMQRVD-VHSDHFTYNFVLKACARAIKCNEKNDQCFG 125
+ NT++R YS S P ++ ++ M R V D F++ FV+KA +N +
Sbjct: 72 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV--------ENFRSL- 131
Query: 126 HDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNI 185
R G ++H + LK GL+ + +L+ MY GCG V FAR VF+EM ++V+WN
Sbjct: 132 -----RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 191
Query: 186 MMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSW 245
+++A R +D A + + M N SWN +LA YI+ L +A+++F EMP RD VSW
Sbjct: 192 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 251
Query: 246 NSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLKE 305
+++I G + + + F ++++ ++ EV+ +L AC++ G+ E GK +H +++
Sbjct: 252 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 311
Query: 306 KHYRIEGYLGNAIVDMYSKCGELRLALEVFNEM-EMKPVSCWNAMIMGLAVHGHCERALE 365
Y + NA++DMYS+CG + +A VF M E + + W +MI GLA+HG E A+
Sbjct: 312 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 371
Query: 366 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 425
+F+ M A P+ ++FI+LL ACSH GL+ EG +F+ M Y I P+++HYGCM+D
Sbjct: 372 LFNEMTAY--GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 431
Query: 426 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 485
L R G LQ+AY I P +++WRTLLGAC H ++EL E+ +RL EL+P GD
Sbjct: 432 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 484
Query: 486 YVLLSNIYA 493
VLLSN YA
Sbjct: 492 LVLLSNAYA 484
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match:
Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)
HSP 1 Score: 322.4 bits (825), Expect = 1.1e-86
Identity = 176/501 (35.13%), Postives = 276/501 (55.09%), Query Frame = 0
Query: 1 MIPPKLHRL----SSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALF 60
+ PP L ++ S+ K LE A A ++K L +M + I ++ + L A +
Sbjct: 26 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTM 85
Query: 61 QETSMDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCN 120
+ + F+ N + + + P+++L +Y M R V +TY+ ++KA + A
Sbjct: 86 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA---- 145
Query: 121 EKNDQCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTV 180
SR G + + K G IQ +L+ YS G + AR VF+EM
Sbjct: 146 ------------SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 205
Query: 181 RSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEM 240
R ++W M+SAY RV D SA+ L M + N + N ++ Y+ L NL A +F +M
Sbjct: 206 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 265
Query: 241 PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGK 300
P +D++SW ++I GY K Y+ A+ +FY M + I EVT +++ ACA +G LEIGK
Sbjct: 266 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 325
Query: 301 KIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHG 360
++H + + ++ Y+G+A+VDMYSKCG L AL VF + K + CWN++I GLA HG
Sbjct: 326 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 385
Query: 361 HCERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLK 420
+ AL+MF K E + KPN VTF+++ AC+H GLV EGR + M+ Y I+ +++
Sbjct: 386 FAQEALKMF--AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 445
Query: 421 HYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAEL 480
HYG M+ L S+ G + EA +I F +V+W LL CR+H+++ + E +F +L L
Sbjct: 446 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 505
Query: 481 EPGKDGDYVLLSNIYAEEERF 498
EP G Y LL ++YAE+ R+
Sbjct: 506 EPMNSGYYFLLVSMYAEQNRW 506
BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match:
A0A0A0LD95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1)
HSP 1 Score: 954.1 bits (2465), Expect = 2.6e-274
Identity = 480/596 (80.54%), Postives = 512/596 (85.91%), Query Frame = 0
Query: 1 MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
M+ PKLHRLS +KELEQAQAFIVKAG NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1 MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60
Query: 61 MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61 MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120
Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180
Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240
Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
VVSWNSII+GYVNVKDYKGAL+LF+SMKQ I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300
Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
ALEMFDSMKAE DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420
Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480
Query: 481 DGDYVLLSNIYAEEERFWNTT--------------LAYSSTLHKTHGDPS---------- 540
DGDYVLLSNIYAEEER W+ A SS + HG+
Sbjct: 481 DGDYVLLSNIYAEEER-WDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSW 540
Query: 541 -----------QSVRRAQPTALVTNCFFMGFSSGFPLEPNTNTNTNTNTNTAFVCQ 562
QSVR AQPTA VTNCFFMGFS FPLEP NTN AFVCQ
Sbjct: 541 ALFSKFLIYNFQSVRGAQPTAFVTNCFFMGFSC-FPLEP--------NTNIAFVCQ 586
BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match:
A0A5D3DN16 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00260 PE=4 SV=1)
HSP 1 Score: 924.1 bits (2387), Expect = 2.9e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0
Query: 4 PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
PKLHRLSS+KELEQAQAFIVKAG NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3 PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62
Query: 64 SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63 SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122
Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182
Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242
Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
WNSIIAGYV VKDYKGALELF+SMKQ I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302
Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362
Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
MFDSMKAE DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422
Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482
Query: 484 YVLLSNIYAEEERF 498
YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496
BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match:
A0A1S3B5F5 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=3656 GN=LOC103486232 PE=4 SV=1)
HSP 1 Score: 924.1 bits (2387), Expect = 2.9e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0
Query: 4 PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
PKLHRLSS+KELEQAQAFIVKAG NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3 PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62
Query: 64 SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63 SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122
Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182
Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242
Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
WNSIIAGYV VKDYKGALELF+SMKQ I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302
Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362
Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
MFDSMKAE DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422
Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482
Query: 484 YVLLSNIYAEEERF 498
YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496
BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match:
A0A5A7TL32 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005830 PE=4 SV=1)
HSP 1 Score: 920.6 bits (2378), Expect = 3.2e-264
Identity = 448/494 (90.69%), Postives = 469/494 (94.94%), Query Frame = 0
Query: 4 PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
PKLHRLSS+KELEQAQAFIVKAG NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3 PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62
Query: 64 SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63 SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122
Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182
Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242
Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
WNSIIAGYV VKDYKGALELF+SMKQ I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302
Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHG+CE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKALE 362
Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
MFDSMKAE DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422
Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
LLSRWGFL+EAYV+IKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482
Query: 484 YVLLSNIYAEEERF 498
YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496
BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match:
A0A6J1IX07 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita maxima OX=3661 GN=LOC111481418 PE=4 SV=1)
HSP 1 Score: 904.0 bits (2335), Expect = 3.1e-259
Identity = 433/496 (87.30%), Postives = 467/496 (94.15%), Query Frame = 0
Query: 2 IPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSM 61
I PKL RLSSMKELE A AFIVKAGLCNHIP+MTKLIAFSSLSPSGSLPHAHALFQ+TSM
Sbjct: 10 ILPKLLRLSSMKELELAHAFIVKAGLCNHIPVMTKLIAFSSLSPSGSLPHAHALFQDTSM 69
Query: 62 DDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQ 121
DDSFICNTMIRAYSN+VFP+KALL+YNHMQR+DVHSDHFTYNFVLKACARAIKC EK+DQ
Sbjct: 70 DDSFICNTMIRAYSNTVFPLKALLVYNHMQRMDVHSDHFTYNFVLKACARAIKCTEKDDQ 129
Query: 122 CFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVS 181
CFGHDIISRKGAEIHTRVLKLGL QDHH+QNSLLLMYSGCGLVVFAR +F EMTVRS VS
Sbjct: 130 CFGHDIISRKGAEIHTRVLKLGLHQDHHVQNSLLLMYSGCGLVVFARRLFEEMTVRSAVS 189
Query: 182 WNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDV 241
WNIMMSAYNRVHDYKSAD LL+LMPQTNV SWNTVLARYI LNNLVAARKVFEEMPERDV
Sbjct: 190 WNIMMSAYNRVHDYKSADALLQLMPQTNVTSWNTVLARYIGLNNLVAARKVFEEMPERDV 249
Query: 242 VSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHES 301
VSWNSIIAGYV KDY+ A+E+F+SMKQS I +TEVTFISILGACAEMG+LE+GKKIH S
Sbjct: 250 VSWNSIIAGYVKAKDYRRAVEVFHSMKQSGIRSTEVTFISILGACAEMGSLEMGKKIHGS 309
Query: 302 LKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361
LK +HYRIEGYLGNA+VDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA
Sbjct: 310 LKAEHYRIEGYLGNAMVDMYAKCGELSLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 369
Query: 362 LEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCM 421
LEMFDSM+A +DDHKPNRVTF+A+LIACSHKGLVAEGRHF +LM+ KYKIMPDLKHYGCM
Sbjct: 370 LEMFDSMEAGNDDHKPNRVTFVAILIACSHKGLVAEGRHFLSLMINKYKIMPDLKHYGCM 429
Query: 422 IDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKD 481
+DLLSRWGFLQEAY MIK+CPFSSC+V+WRTLLG CRVHRHVELGEE+F +L ELE KD
Sbjct: 430 VDLLSRWGFLQEAYEMIKSCPFSSCAVVWRTLLGGCRVHRHVELGEEAFCKLGELEARKD 489
Query: 482 GDYVLLSNIYAEEERF 498
GDYVLLSNIYA+EER+
Sbjct: 490 GDYVLLSNIYAQEERW 505
BLAST of Lsi03G022740 vs. NCBI nr
Match:
KGN58697.1 (hypothetical protein Csa_000806 [Cucumis sativus])
HSP 1 Score: 954.1 bits (2465), Expect = 5.5e-274
Identity = 480/596 (80.54%), Postives = 512/596 (85.91%), Query Frame = 0
Query: 1 MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
M+ PKLHRLS +KELEQAQAFIVKAG NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1 MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60
Query: 61 MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61 MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120
Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180
Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240
Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
VVSWNSII+GYVNVKDYKGAL+LF+SMKQ I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300
Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
ALEMFDSMKAE DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420
Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480
Query: 481 DGDYVLLSNIYAEEERFWNTT--------------LAYSSTLHKTHGDPS---------- 540
DGDYVLLSNIYAEEER W+ A SS + HG+
Sbjct: 481 DGDYVLLSNIYAEEER-WDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSW 540
Query: 541 -----------QSVRRAQPTALVTNCFFMGFSSGFPLEPNTNTNTNTNTNTAFVCQ 562
QSVR AQPTA VTNCFFMGFS FPLEP NTN AFVCQ
Sbjct: 541 ALFSKFLIYNFQSVRGAQPTAFVTNCFFMGFSC-FPLEP--------NTNIAFVCQ 586
BLAST of Lsi03G022740 vs. NCBI nr
Match:
XP_038904117.1 (pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida])
HSP 1 Score: 953.7 bits (2464), Expect = 7.1e-274
Identity = 461/496 (92.94%), Postives = 480/496 (96.77%), Query Frame = 0
Query: 2 IPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSM 61
I PKLHRLSSMKELEQAQAFIVK GLCNHI IMTKLIAFSSLSPSGSLPH+HALFQETSM
Sbjct: 10 IIPKLHRLSSMKELEQAQAFIVKTGLCNHITIMTKLIAFSSLSPSGSLPHSHALFQETSM 69
Query: 62 DDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQ 121
DDSFICNTMIRAYSNSVFPVKALLIYNHMQR+DVHSDHFTYNFVLK CARAIKC EK+DQ
Sbjct: 70 DDSFICNTMIRAYSNSVFPVKALLIYNHMQRMDVHSDHFTYNFVLKVCARAIKCTEKDDQ 129
Query: 122 CFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVS 181
CFGHDIISRKGAEIH+RVLKLGLDQDHH+QNSLLLMYS CGLVVFARL+F+EMT+RS VS
Sbjct: 130 CFGHDIISRKGAEIHSRVLKLGLDQDHHVQNSLLLMYSACGLVVFARLIFDEMTMRSAVS 189
Query: 182 WNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDV 241
WNIM+SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLN+LVAARKVFEEMPERDV
Sbjct: 190 WNIMVSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNDLVAARKVFEEMPERDV 249
Query: 242 VSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHES 301
VSWNSIIAGYV VKDYK ALELF+SMKQS I ATEVTFISILGACAEMGALE+GKKIHES
Sbjct: 250 VSWNSIIAGYVKVKDYKRALELFHSMKQSNIRATEVTFISILGACAEMGALEMGKKIHES 309
Query: 302 LKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361
LKEKHYRI+GYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA
Sbjct: 310 LKEKHYRIKGYLGNAIVDMYAKCGELHLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 369
Query: 362 LEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCM 421
LEMFDSMKAEHD KPNR+TFIALLIACSHKGLVAEGRHFFNLM+TKYKI PDLKHYGCM
Sbjct: 370 LEMFDSMKAEHDYQKPNRITFIALLIACSHKGLVAEGRHFFNLMITKYKITPDLKHYGCM 429
Query: 422 IDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKD 481
IDLLSRWGFLQEAYVMIKTCPFSSCS+LWRTLLG CRVHRHVELGEESFR+LAELEPGKD
Sbjct: 430 IDLLSRWGFLQEAYVMIKTCPFSSCSILWRTLLGGCRVHRHVELGEESFRKLAELEPGKD 489
Query: 482 GDYVLLSNIYAEEERF 498
GDYVLLSNIYAEEER+
Sbjct: 490 GDYVLLSNIYAEEERW 505
BLAST of Lsi03G022740 vs. NCBI nr
Match:
XP_008442325.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis melo] >TYK24912.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 924.1 bits (2387), Expect = 6.0e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0
Query: 4 PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
PKLHRLSS+KELEQAQAFIVKAG NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3 PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62
Query: 64 SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63 SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122
Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182
Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242
Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
WNSIIAGYV VKDYKGALELF+SMKQ I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302
Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362
Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
MFDSMKAE DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422
Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482
Query: 484 YVLLSNIYAEEERF 498
YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496
BLAST of Lsi03G022740 vs. NCBI nr
Match:
KAA0044223.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 920.6 bits (2378), Expect = 6.7e-264
Identity = 448/494 (90.69%), Postives = 469/494 (94.94%), Query Frame = 0
Query: 4 PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
PKLHRLSS+KELEQAQAFIVKAG NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3 PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62
Query: 64 SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63 SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122
Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182
Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242
Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
WNSIIAGYV VKDYKGALELF+SMKQ I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302
Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHG+CE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKALE 362
Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
MFDSMKAE DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422
Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
LLSRWGFL+EAYV+IKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482
Query: 484 YVLLSNIYAEEERF 498
YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496
BLAST of Lsi03G022740 vs. NCBI nr
Match:
XP_004137888.1 (pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus])
HSP 1 Score: 917.1 bits (2369), Expect = 7.4e-263
Identity = 442/497 (88.93%), Postives = 472/497 (94.97%), Query Frame = 0
Query: 1 MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
M+ PKLHRLS +KELEQAQAFIVKAG NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1 MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60
Query: 61 MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61 MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120
Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180
Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240
Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
VVSWNSII+GYVNVKDYKGAL+LF+SMKQ I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300
Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
ALEMFDSMKAE DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420
Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480
Query: 481 DGDYVLLSNIYAEEERF 498
DGDYVLLSNIYAEEER+
Sbjct: 481 DGDYVLLSNIYAEEERW 497
BLAST of Lsi03G022740 vs. TAIR 10
Match:
AT5G15300.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.7 bits (875), Expect = 1.2e-93
Identity = 182/495 (36.77%), Postives = 299/495 (60.40%), Query Frame = 0
Query: 4 PKL-HRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMD 63
PKL +++ L+Q A +V GL +++ ++ +LI +SLS G+L +AH LF E
Sbjct: 16 PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75
Query: 64 DSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQC 123
D ICN ++R + S+ P K + +Y M++ V D +T+ FVLKAC+ K +++
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACS---KLEWRSN-- 135
Query: 124 FGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSW 183
G H +V++ G + +++N+L+L ++ CG + A +F++ V+W
Sbjct: 136 ---------GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195
Query: 184 NIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVV 243
+ M S Y + A L + MP + ++WN ++ ++ + +AR++F+ E+DVV
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 255
Query: 244 SWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIH-ES 303
+WN++I+GYVN K AL +F M+ + VT +S+L ACA +G LE GK++H
Sbjct: 256 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 315
Query: 304 LKEKHYRIEGYLG----NAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGH 363
L+ Y+G NA++DMY+KCG + A+EVF ++ + +S WN +I+GLA+H H
Sbjct: 316 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 375
Query: 364 CERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKH 423
E ++EMF+ M + PN VTFI +++ACSH G V EGR +F+LM Y I P++KH
Sbjct: 376 AEGSIEMFEEM--QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 435
Query: 424 YGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELE 483
YGCM+D+L R G L+EA++ +++ +++WRTLLGAC+++ +VELG+ + +L +
Sbjct: 436 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 493
Query: 484 PGKDGDYVLLSNIYA 493
+ GDYVLLSNIYA
Sbjct: 496 KDESGDYVLLSNIYA 493
BLAST of Lsi03G022740 vs. TAIR 10
Match:
AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 335.1 bits (858), Expect = 1.1e-91
Identity = 181/492 (36.79%), Postives = 276/492 (56.10%), Query Frame = 0
Query: 8 RLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPS-GSLPHAHALFQETSMDDSFI 67
R S+ E++QA AF++K GL + +KL+AF++ +P ++ +AH++ + F
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 68 CNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGHD 127
N++IRAY+NS P AL ++ M V D +++ FVLKACA E
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167
Query: 128 IISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNIMM 187
G +IH +K GL D ++N+L+ +Y G AR V + M VR VSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227
Query: 188 SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSWNS 247
SAY A L + M + NV SWN +++ Y + A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287
Query: 248 IIAGYVNVKDYKGALELFYSMKQSEITATE-VTFISILGACAEMGALEIGKKIHESLKEK 307
++ Y +V Y LE+F M + T +S+L ACA +G+L G+ +H + +
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347
Query: 308 HYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMF 367
IEG+L A+VDMYSKCG++ ALEVF + VS WN++I L+VHG + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407
Query: 368 DSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLL 427
M ++ KPN +TFI +L AC+H G++ + R F +M + Y++ P ++HYGCM+DLL
Sbjct: 408 SEM--VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467
Query: 428 SRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGDYV 487
R G ++EA ++ P S+L +LLGAC+ +E E RL EL Y
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 523
Query: 488 LLSNIYAEEERF 498
+SN+YA + R+
Sbjct: 528 QMSNLYASDGRW 523
BLAST of Lsi03G022740 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 330.1 bits (845), Expect = 3.6e-90
Identity = 185/525 (35.24%), Postives = 288/525 (54.86%), Query Frame = 0
Query: 6 LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
L + +++ +++Q A I++ L + I KLI+ SL +L A +F + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 85
Query: 66 ICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGH 125
+CN++IRA++ + P +A +++ MQR + +D+FTY F+LKAC+ G
Sbjct: 86 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------------GQ 145
Query: 126 DIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCG-------LVVF------------ 185
+ +H + KLGL D ++ N+L+ YS CG + +F
Sbjct: 146 SWLP-VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 205
Query: 186 --------------ARLVFNEMTVRSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVIS 245
AR +F+EM R ++SWN M+ Y R + A L E MP+ N +S
Sbjct: 206 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 265
Query: 246 WNTVLARYIRLNNLVAARKVFEEM--PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQS 305
W+T++ Y + ++ AR +F++M P ++VV+W IIAGY K A L M S
Sbjct: 266 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 325
Query: 306 EITATEVTFISILGACAEMGALEIGKKIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLA 365
+ ISIL AC E G L +G +IH LK + Y+ NA++DMY+KCG L+ A
Sbjct: 326 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 385
Query: 366 LEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEHDDHKPNRVTFIALLIACS 425
+VFN++ K + WN M+ GL VHGH + A+E+F M+ E +P++VTFIA+L +C+
Sbjct: 386 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKVTFIAVLCSCN 445
Query: 426 HKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLW 485
H GL+ EG +F M Y ++P ++HYGC++DLL R G L+EA +++T P V+W
Sbjct: 446 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 505
Query: 486 RTLLGACRVHRHVELGEESFRRLAELEPGKDGDYVLLSNIYAEEE 496
LLGACR+H V++ +E L +L+P G+Y LLSNIYA E
Sbjct: 506 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
BLAST of Lsi03G022740 vs. TAIR 10
Match:
AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 325.9 bits (834), Expect = 6.8e-89
Identity = 180/489 (36.81%), Postives = 280/489 (57.26%), Query Frame = 0
Query: 6 LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
L+ +++ L Q +K G+ KLI ++S S +LP+A L D+F
Sbjct: 12 LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAF 71
Query: 66 ICNTMIRAYSNSVFPVKALLIYNHMQRVD-VHSDHFTYNFVLKACARAIKCNEKNDQCFG 125
+ NT++R YS S P ++ ++ M R V D F++ FV+KA +N +
Sbjct: 72 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV--------ENFRSL- 131
Query: 126 HDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNI 185
R G ++H + LK GL+ + +L+ MY GCG V FAR VF+EM ++V+WN
Sbjct: 132 -----RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 191
Query: 186 MMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSW 245
+++A R +D A + + M N SWN +LA YI+ L +A+++F EMP RD VSW
Sbjct: 192 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 251
Query: 246 NSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLKE 305
+++I G + + + F ++++ ++ EV+ +L AC++ G+ E GK +H +++
Sbjct: 252 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 311
Query: 306 KHYRIEGYLGNAIVDMYSKCGELRLALEVFNEM-EMKPVSCWNAMIMGLAVHGHCERALE 365
Y + NA++DMYS+CG + +A VF M E + + W +MI GLA+HG E A+
Sbjct: 312 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 371
Query: 366 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 425
+F+ M A P+ ++FI+LL ACSH GL+ EG +F+ M Y I P+++HYGCM+D
Sbjct: 372 LFNEMTAY--GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 431
Query: 426 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 485
L R G LQ+AY I P +++WRTLLGAC H ++EL E+ +RL EL+P GD
Sbjct: 432 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 484
Query: 486 YVLLSNIYA 493
VLLSN YA
Sbjct: 492 LVLLSNAYA 484
BLAST of Lsi03G022740 vs. TAIR 10
Match:
AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )
HSP 1 Score: 322.4 bits (825), Expect = 7.5e-88
Identity = 176/501 (35.13%), Postives = 276/501 (55.09%), Query Frame = 0
Query: 1 MIPPKLHRL----SSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALF 60
+ PP L ++ S+ K LE A A ++K L +M + I ++ + L A +
Sbjct: 771 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTM 830
Query: 61 QETSMDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCN 120
+ + F+ N + + + P+++L +Y M R V +TY+ ++KA + A
Sbjct: 831 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA---- 890
Query: 121 EKNDQCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTV 180
SR G + + K G IQ +L+ YS G + AR VF+EM
Sbjct: 891 ------------SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 950
Query: 181 RSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEM 240
R ++W M+SAY RV D SA+ L M + N + N ++ Y+ L NL A +F +M
Sbjct: 951 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 1010
Query: 241 PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGK 300
P +D++SW ++I GY K Y+ A+ +FY M + I EVT +++ ACA +G LEIGK
Sbjct: 1011 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1070
Query: 301 KIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHG 360
++H + + ++ Y+G+A+VDMYSKCG L AL VF + K + CWN++I GLA HG
Sbjct: 1071 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1130
Query: 361 HCERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLK 420
+ AL+MF K E + KPN VTF+++ AC+H GLV EGR + M+ Y I+ +++
Sbjct: 1131 FAQEALKMF--AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1190
Query: 421 HYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAEL 480
HYG M+ L S+ G + EA +I F +V+W LL CR+H+++ + E +F +L L
Sbjct: 1191 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 1250
Query: 481 EPGKDGDYVLLSNIYAEEERF 498
EP G Y LL ++YAE+ R+
Sbjct: 1251 EPMNSGYYFLLVSMYAEQNRW 1251
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LXF2 | 1.7e-92 | 36.77 | Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX... | [more] |
O49399 | 1.6e-90 | 36.79 | Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX... | [more] |
Q9LS72 | 5.1e-89 | 35.24 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9CA54 | 9.5e-88 | 36.81 | Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... | [more] |
Q56X05 | 1.1e-86 | 35.13 | Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LD95 | 2.6e-274 | 80.54 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1 | [more] |
A0A5D3DN16 | 2.9e-265 | 91.09 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B5F5 | 2.9e-265 | 91.09 | pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=36... | [more] |
A0A5A7TL32 | 3.2e-264 | 90.69 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1IX07 | 3.1e-259 | 87.30 | pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
KGN58697.1 | 5.5e-274 | 80.54 | hypothetical protein Csa_000806 [Cucumis sativus] | [more] |
XP_038904117.1 | 7.1e-274 | 92.94 | pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida] | [more] |
XP_008442325.1 | 6.0e-265 | 91.09 | PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis m... | [more] |
KAA0044223.1 | 6.7e-264 | 90.69 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_004137888.1 | 7.4e-263 | 88.93 | pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
AT5G15300.1 | 1.2e-93 | 36.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18840.1 | 1.1e-91 | 36.79 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G29230.1 | 3.6e-90 | 35.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74630.1 | 6.8e-89 | 36.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G06150.1 | 7.5e-88 | 35.13 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | [more] |