Lsi03G022740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G022740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr03: 33662161 .. 33664224 (+)
RNA-Seq ExpressionLsi03G022740
SyntenyLsi03G022740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCTCCTAAGCTTCACCGTCTCTCTTCCATGAAAGAACTGGAACAGGCTCAAGCTTTTATCGTCAAAGCCGGTCTCTGTAACCACATTCCTATAATGACGAAGCTAATTGCATTCTCATCTCTTTCTCCATCAGGAAGTCTCCCTCATGCTCATGCTCTGTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAACAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCATATGCAACGAGTGGATGTTCATTCTGATCACTTCACCTACAATTTTGTGCTCAAGGCTTGTGCAAGAGCTATCAAATGCAATGAAAAGAACGACCAATGTTTTGGGCACGATATCATTTCTCGCAAGGGTGCTGAAATTCATACCCGTGTCCTGAAATTGGGGCTTGATCAAGACCATCACATCCAAAATTCATTGCTTCTAATGTACTCTGGGTGTGGCTTGGTAGTTTTTGCTCGTTTGGTTTTCAATGAAATGACTGTGAGAAGTGTTGTTTCCTGGAACATTATGATGTCGGCTTATAATCGAGTTCATGACTATAAGTCGGCAGATGTTCTTCTTGAATTGATGCCTCAGACAAATGTAATCTCTTGGAATACTGTATTGGCACGATATATTAGATTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATTATTGCCGGTTATGTTAATGTCAAGGATTATAAGGGAGCTCTGGAGCTCTTCTATAGCATGAAACAGTCGGAAATTACAGCAACTGAAGTAACGTTTATTTCTATATTGGGCGCTTGTGCTGAAATGGGTGCATTGGAGATAGGGAAGAAAATCCACGAGTCCTTGAAAGAGAAGCATTACAGAATTGAAGGATATTTAGGTAATGCCATAGTAGATATGTATTCTAAATGTGGGGAACTGCGCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGCTGGAATGCGATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAGAGCCTTGGAGATGTTTGATTCCATGAAGGCAGAACACGATGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGTAGTCACAAGGGTCTGGTGGCAGAAGGACGCCATTTTTTCAATCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGGTTGCATGATTGACCTTCTTAGCAGATGGGGTTTTTTGCAAGAAGCCTACGTTATGATCAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGCTTGTAGAGTACACAGGCATGTAGAATTGGGCGAGGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCAGGGAAGGATGGGGATTATGTACTTTTGTCAAACATCTACGCGGAAGAAGAGCGGTGGGATGATGTGGAGCGACTGAGAAACAAGATGATTGATTATGGAGTTTGTAAGAAAGCTGGATCTAGTCACGTTTAAATTTAATGGTCCAAGGTTTCTGCAGGGTACGAGGGCACTCCATCATGTTAATGTTCATATACACTGGTGGATATTTGGGTAGAGAGTTTTAGTTGACCACACTGTTTGCTGTTTAGGGAGTTAGTGAGTTAGTATGTTAATCATTTTCTGTTTCACTTTCTCATTAGTTTTTGGAACACTACGCTTGCCTACTCCTCCACGTTGCACAAGACTCATGGGGACCCTTCTCAAGTATGGGAAAAAATGGATGGATCATCAAGAATTGGGCCCTTATTTAGCCATTTCTGATATATTTTTTAGTCGGTTCGTAGGGCTCAGCCCACTGCTCTTGTGACAAACTGTTTCTTTATGGGTTTTTCTTCTGGCTTTCCCCTAGAGCCCAACACTAACACTAACACTAACACTAACACTAACACCGCTTTCGTCTGTCAAGCATATGGAGATGAGGCCAATTCGTCCAAAGTTAGAACGGAGTTTGAGATCATCTTACTTAGTAGT

mRNA sequence

ATGATTCCTCCTAAGCTTCACCGTCTCTCTTCCATGAAAGAACTGGAACAGGCTCAAGCTTTTATCGTCAAAGCCGGTCTCTGTAACCACATTCCTATAATGACGAAGCTAATTGCATTCTCATCTCTTTCTCCATCAGGAAGTCTCCCTCATGCTCATGCTCTGTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAACAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCATATGCAACGAGTGGATGTTCATTCTGATCACTTCACCTACAATTTTGTGCTCAAGGCTTGTGCAAGAGCTATCAAATGCAATGAAAAGAACGACCAATGTTTTGGGCACGATATCATTTCTCGCAAGGGTGCTGAAATTCATACCCGTGTCCTGAAATTGGGGCTTGATCAAGACCATCACATCCAAAATTCATTGCTTCTAATGTACTCTGGGTGTGGCTTGGTAGTTTTTGCTCGTTTGGTTTTCAATGAAATGACTGTGAGAAGTGTTGTTTCCTGGAACATTATGATGTCGGCTTATAATCGAGTTCATGACTATAAGTCGGCAGATGTTCTTCTTGAATTGATGCCTCAGACAAATGTAATCTCTTGGAATACTGTATTGGCACGATATATTAGATTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATTATTGCCGGTTATGTTAATGTCAAGGATTATAAGGGAGCTCTGGAGCTCTTCTATAGCATGAAACAGTCGGAAATTACAGCAACTGAAGTAACGTTTATTTCTATATTGGGCGCTTGTGCTGAAATGGGTGCATTGGAGATAGGGAAGAAAATCCACGAGTCCTTGAAAGAGAAGCATTACAGAATTGAAGGATATTTAGGTAATGCCATAGTAGATATGTATTCTAAATGTGGGGAACTGCGCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGCTGGAATGCGATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAGAGCCTTGGAGATGTTTGATTCCATGAAGGCAGAACACGATGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGTAGTCACAAGGGTCTGGTGGCAGAAGGACGCCATTTTTTCAATCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGGTTGCATGATTGACCTTCTTAGCAGATGGGGTTTTTTGCAAGAAGCCTACGTTATGATCAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGCTTGTAGAGTACACAGGCATGTAGAATTGGGCGAGGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCAGGGAAGGATGGGGATTATGTACTTTTGTCAAACATCTACGCGGAAGAAGAGCGTTTTTGGAACACTACGCTTGCCTACTCCTCCACGTTGCACAAGACTCATGGGGACCCTTCTCAATCGGTTCGTAGGGCTCAGCCCACTGCTCTTGTGACAAACTGTTTCTTTATGGGTTTTTCTTCTGGCTTTCCCCTAGAGCCCAACACTAACACTAACACTAACACTAACACTAACACCGCTTTCGTCTGTCAAGCATATGGAGATGAGGCCAATTCGTCCAAAGTTAGAACGGAGTTTGAGATCATCTTACTTAGTAGT

Coding sequence (CDS)

ATGATTCCTCCTAAGCTTCACCGTCTCTCTTCCATGAAAGAACTGGAACAGGCTCAAGCTTTTATCGTCAAAGCCGGTCTCTGTAACCACATTCCTATAATGACGAAGCTAATTGCATTCTCATCTCTTTCTCCATCAGGAAGTCTCCCTCATGCTCATGCTCTGTTCCAAGAGACTTCCATGGACGATTCTTTCATTTGTAACACCATGATTCGGGCCTACTCCAACAGTGTTTTTCCCGTTAAAGCTTTGCTTATTTACAACCATATGCAACGAGTGGATGTTCATTCTGATCACTTCACCTACAATTTTGTGCTCAAGGCTTGTGCAAGAGCTATCAAATGCAATGAAAAGAACGACCAATGTTTTGGGCACGATATCATTTCTCGCAAGGGTGCTGAAATTCATACCCGTGTCCTGAAATTGGGGCTTGATCAAGACCATCACATCCAAAATTCATTGCTTCTAATGTACTCTGGGTGTGGCTTGGTAGTTTTTGCTCGTTTGGTTTTCAATGAAATGACTGTGAGAAGTGTTGTTTCCTGGAACATTATGATGTCGGCTTATAATCGAGTTCATGACTATAAGTCGGCAGATGTTCTTCTTGAATTGATGCCTCAGACAAATGTAATCTCTTGGAATACTGTATTGGCACGATATATTAGATTGAATAATCTTGTAGCAGCACGAAAAGTGTTTGAAGAAATGCCTGAGAGGGACGTTGTATCTTGGAATTCTATTATTGCCGGTTATGTTAATGTCAAGGATTATAAGGGAGCTCTGGAGCTCTTCTATAGCATGAAACAGTCGGAAATTACAGCAACTGAAGTAACGTTTATTTCTATATTGGGCGCTTGTGCTGAAATGGGTGCATTGGAGATAGGGAAGAAAATCCACGAGTCCTTGAAAGAGAAGCATTACAGAATTGAAGGATATTTAGGTAATGCCATAGTAGATATGTATTCTAAATGTGGGGAACTGCGCTTAGCTTTGGAGGTATTCAATGAAATGGAGATGAAGCCTGTAAGTTGCTGGAATGCGATGATTATGGGTTTGGCAGTTCATGGTCACTGTGAGAGAGCCTTGGAGATGTTTGATTCCATGAAGGCAGAACACGATGATCACAAACCCAATCGGGTAACTTTCATTGCTCTTCTGATTGCCTGTAGTCACAAGGGTCTGGTGGCAGAAGGACGCCATTTTTTCAATCTGATGGTTACCAAATACAAGATAATGCCGGATTTAAAGCACTATGGTTGCATGATTGACCTTCTTAGCAGATGGGGTTTTTTGCAAGAAGCCTACGTTATGATCAAAACTTGCCCTTTCAGTTCATGCTCTGTTCTATGGAGAACGTTGTTGGGTGCTTGTAGAGTACACAGGCATGTAGAATTGGGCGAGGAATCGTTCCGCAGACTTGCAGAGTTGGAGCCAGGGAAGGATGGGGATTATGTACTTTTGTCAAACATCTACGCGGAAGAAGAGCGTTTTTGGAACACTACGCTTGCCTACTCCTCCACGTTGCACAAGACTCATGGGGACCCTTCTCAATCGGTTCGTAGGGCTCAGCCCACTGCTCTTGTGACAAACTGTTTCTTTATGGGTTTTTCTTCTGGCTTTCCCCTAGAGCCCAACACTAACACTAACACTAACACTAACACTAACACCGCTTTCGTCTGTCAAGCATATGGAGATGAGGCCAATTCGTCCAAAGTTAGAACGGAGTTTGAGATCATCTTACTTAGTAGT

Protein sequence

MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGDYVLLSNIYAEEERFWNTTLAYSSTLHKTHGDPSQSVRRAQPTALVTNCFFMGFSSGFPLEPNTNTNTNTNTNTAFVCQAYGDEANSSKVRTEFEIILLSS
Homology
BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match: Q9LXF2 (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 341.7 bits (875), Expect = 1.7e-92
Identity = 182/495 (36.77%), Postives = 299/495 (60.40%), Query Frame = 0

Query: 4   PKL-HRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMD 63
           PKL     +++ L+Q  A +V  GL +++ ++ +LI  +SLS  G+L +AH LF E    
Sbjct: 16  PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75

Query: 64  DSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQC 123
           D  ICN ++R  + S+ P K + +Y  M++  V  D +T+ FVLKAC+   K   +++  
Sbjct: 76  DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACS---KLEWRSN-- 135

Query: 124 FGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSW 183
                    G   H +V++ G   + +++N+L+L ++ CG +  A  +F++      V+W
Sbjct: 136 ---------GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195

Query: 184 NIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVV 243
           + M S Y +      A  L + MP  + ++WN ++   ++   + +AR++F+   E+DVV
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 255

Query: 244 SWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIH-ES 303
           +WN++I+GYVN    K AL +F  M+ +      VT +S+L ACA +G LE GK++H   
Sbjct: 256 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 315

Query: 304 LKEKHYRIEGYLG----NAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGH 363
           L+        Y+G    NA++DMY+KCG +  A+EVF  ++ + +S WN +I+GLA+H H
Sbjct: 316 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 375

Query: 364 CERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKH 423
            E ++EMF+ M  +     PN VTFI +++ACSH G V EGR +F+LM   Y I P++KH
Sbjct: 376 AEGSIEMFEEM--QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 435

Query: 424 YGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELE 483
           YGCM+D+L R G L+EA++ +++      +++WRTLLGAC+++ +VELG+ +  +L  + 
Sbjct: 436 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 493

Query: 484 PGKDGDYVLLSNIYA 493
             + GDYVLLSNIYA
Sbjct: 496 KDESGDYVLLSNIYA 493

BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match: O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-90
Identity = 181/492 (36.79%), Postives = 276/492 (56.10%), Query Frame = 0

Query: 8   RLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPS-GSLPHAHALFQETSMDDSFI 67
           R  S+ E++QA AF++K GL +     +KL+AF++ +P   ++ +AH++       + F 
Sbjct: 48  RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107

Query: 68  CNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGHD 127
            N++IRAY+NS  P  AL ++  M    V  D +++ FVLKACA      E         
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167

Query: 128 IISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNIMM 187
                G +IH   +K GL  D  ++N+L+ +Y   G    AR V + M VR  VSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227

Query: 188 SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSWNS 247
           SAY        A  L + M + NV SWN +++ Y     +  A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287

Query: 248 IIAGYVNVKDYKGALELFYSMKQSEITATE-VTFISILGACAEMGALEIGKKIHESLKEK 307
           ++  Y +V  Y   LE+F  M        +  T +S+L ACA +G+L  G+ +H  + + 
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347

Query: 308 HYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMF 367
              IEG+L  A+VDMYSKCG++  ALEVF     + VS WN++I  L+VHG  + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407

Query: 368 DSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLL 427
             M   ++  KPN +TFI +L AC+H G++ + R  F +M + Y++ P ++HYGCM+DLL
Sbjct: 408 SEM--VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467

Query: 428 SRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGDYV 487
            R G ++EA  ++   P    S+L  +LLGAC+    +E  E    RL EL       Y 
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 523

Query: 488 LLSNIYAEEERF 498
            +SN+YA + R+
Sbjct: 528 QMSNLYASDGRW 523

BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.1e-89
Identity = 185/525 (35.24%), Postives = 288/525 (54.86%), Query Frame = 0

Query: 6   LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
           L + +++ +++Q  A I++  L   + I  KLI+  SL    +L  A  +F +    +  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 85

Query: 66  ICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGH 125
           +CN++IRA++ +  P +A  +++ MQR  + +D+FTY F+LKAC+             G 
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------------GQ 145

Query: 126 DIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCG-------LVVF------------ 185
             +      +H  + KLGL  D ++ N+L+  YS CG       + +F            
Sbjct: 146 SWLP-VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 205

Query: 186 --------------ARLVFNEMTVRSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVIS 245
                         AR +F+EM  R ++SWN M+  Y R  +   A  L E MP+ N +S
Sbjct: 206 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 265

Query: 246 WNTVLARYIRLNNLVAARKVFEEM--PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQS 305
           W+T++  Y +  ++  AR +F++M  P ++VV+W  IIAGY      K A  L   M  S
Sbjct: 266 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 325

Query: 306 EITATEVTFISILGACAEMGALEIGKKIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLA 365
            +       ISIL AC E G L +G +IH  LK  +     Y+ NA++DMY+KCG L+ A
Sbjct: 326 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 385

Query: 366 LEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEHDDHKPNRVTFIALLIACS 425
            +VFN++  K +  WN M+ GL VHGH + A+E+F  M+ E    +P++VTFIA+L +C+
Sbjct: 386 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKVTFIAVLCSCN 445

Query: 426 HKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLW 485
           H GL+ EG  +F  M   Y ++P ++HYGC++DLL R G L+EA  +++T P     V+W
Sbjct: 446 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 505

Query: 486 RTLLGACRVHRHVELGEESFRRLAELEPGKDGDYVLLSNIYAEEE 496
             LLGACR+H  V++ +E    L +L+P   G+Y LLSNIYA  E
Sbjct: 506 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532

BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 9.5e-88
Identity = 180/489 (36.81%), Postives = 280/489 (57.26%), Query Frame = 0

Query: 6   LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
           L+   +++ L Q     +K G+        KLI   ++S S +LP+A  L       D+F
Sbjct: 12  LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAF 71

Query: 66  ICNTMIRAYSNSVFPVKALLIYNHMQRVD-VHSDHFTYNFVLKACARAIKCNEKNDQCFG 125
           + NT++R YS S  P  ++ ++  M R   V  D F++ FV+KA         +N +   
Sbjct: 72  MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV--------ENFRSL- 131

Query: 126 HDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNI 185
                R G ++H + LK GL+    +  +L+ MY GCG V FAR VF+EM   ++V+WN 
Sbjct: 132 -----RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 191

Query: 186 MMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSW 245
           +++A  R +D   A  + + M   N  SWN +LA YI+   L +A+++F EMP RD VSW
Sbjct: 192 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 251

Query: 246 NSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLKE 305
           +++I G  +   +  +   F  ++++ ++  EV+   +L AC++ G+ E GK +H  +++
Sbjct: 252 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 311

Query: 306 KHYRIEGYLGNAIVDMYSKCGELRLALEVFNEM-EMKPVSCWNAMIMGLAVHGHCERALE 365
             Y     + NA++DMYS+CG + +A  VF  M E + +  W +MI GLA+HG  E A+ 
Sbjct: 312 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 371

Query: 366 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 425
           +F+ M A      P+ ++FI+LL ACSH GL+ EG  +F+ M   Y I P+++HYGCM+D
Sbjct: 372 LFNEMTAY--GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 431

Query: 426 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 485
           L  R G LQ+AY  I   P    +++WRTLLGAC  H ++EL E+  +RL EL+P   GD
Sbjct: 432 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 484

Query: 486 YVLLSNIYA 493
            VLLSN YA
Sbjct: 492 LVLLSNAYA 484

BLAST of Lsi03G022740 vs. ExPASy Swiss-Prot
Match: Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-86
Identity = 176/501 (35.13%), Postives = 276/501 (55.09%), Query Frame = 0

Query: 1   MIPPKLHRL----SSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALF 60
           + PP L ++    S+ K LE A A ++K  L     +M + I  ++ +    L  A +  
Sbjct: 26  LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTM 85

Query: 61  QETSMDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCN 120
            +    + F+ N + + +     P+++L +Y  M R  V    +TY+ ++KA + A    
Sbjct: 86  TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA---- 145

Query: 121 EKNDQCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTV 180
                       SR G  +   + K G      IQ +L+  YS  G +  AR VF+EM  
Sbjct: 146 ------------SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 205

Query: 181 RSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEM 240
           R  ++W  M+SAY RV D  SA+ L   M + N  + N ++  Y+ L NL  A  +F +M
Sbjct: 206 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 265

Query: 241 PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGK 300
           P +D++SW ++I GY   K Y+ A+ +FY M +  I   EVT  +++ ACA +G LEIGK
Sbjct: 266 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 325

Query: 301 KIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHG 360
           ++H    +  + ++ Y+G+A+VDMYSKCG L  AL VF  +  K + CWN++I GLA HG
Sbjct: 326 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 385

Query: 361 HCERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLK 420
             + AL+MF   K E +  KPN VTF+++  AC+H GLV EGR  +  M+  Y I+ +++
Sbjct: 386 FAQEALKMF--AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 445

Query: 421 HYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAEL 480
           HYG M+ L S+ G + EA  +I    F   +V+W  LL  CR+H+++ + E +F +L  L
Sbjct: 446 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 505

Query: 481 EPGKDGDYVLLSNIYAEEERF 498
           EP   G Y LL ++YAE+ R+
Sbjct: 506 EPMNSGYYFLLVSMYAEQNRW 506

BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match: A0A0A0LD95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.6e-274
Identity = 480/596 (80.54%), Postives = 512/596 (85.91%), Query Frame = 0

Query: 1   MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
           M+ PKLHRLS +KELEQAQAFIVKAG  NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1   MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60

Query: 61  MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
           MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61  MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120

Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
           QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180

Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
           SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240

Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
           VVSWNSII+GYVNVKDYKGAL+LF+SMKQ  I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300

Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
           SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360

Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
           ALEMFDSMKAE  DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420

Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
           MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480

Query: 481 DGDYVLLSNIYAEEERFWNTT--------------LAYSSTLHKTHGDPS---------- 540
           DGDYVLLSNIYAEEER W+                 A SS   + HG+            
Sbjct: 481 DGDYVLLSNIYAEEER-WDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSW 540

Query: 541 -----------QSVRRAQPTALVTNCFFMGFSSGFPLEPNTNTNTNTNTNTAFVCQ 562
                      QSVR AQPTA VTNCFFMGFS  FPLEP        NTN AFVCQ
Sbjct: 541 ALFSKFLIYNFQSVRGAQPTAFVTNCFFMGFSC-FPLEP--------NTNIAFVCQ 586

BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match: A0A5D3DN16 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00260 PE=4 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.9e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0

Query: 4   PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
           PKLHRLSS+KELEQAQAFIVKAG  NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3   PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62

Query: 64  SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
           SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63  SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122

Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
           GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182

Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
           IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242

Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
           WNSIIAGYV VKDYKGALELF+SMKQ  I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302

Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
           EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362

Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
           MFDSMKAE  DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422

Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
           LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482

Query: 484 YVLLSNIYAEEERF 498
           YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496

BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match: A0A1S3B5F5 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=3656 GN=LOC103486232 PE=4 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 2.9e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0

Query: 4   PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
           PKLHRLSS+KELEQAQAFIVKAG  NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3   PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62

Query: 64  SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
           SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63  SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122

Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
           GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182

Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
           IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242

Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
           WNSIIAGYV VKDYKGALELF+SMKQ  I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302

Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
           EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362

Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
           MFDSMKAE  DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422

Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
           LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482

Query: 484 YVLLSNIYAEEERF 498
           YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496

BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match: A0A5A7TL32 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005830 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 3.2e-264
Identity = 448/494 (90.69%), Postives = 469/494 (94.94%), Query Frame = 0

Query: 4   PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
           PKLHRLSS+KELEQAQAFIVKAG  NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3   PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62

Query: 64  SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
           SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63  SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122

Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
           GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182

Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
           IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242

Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
           WNSIIAGYV VKDYKGALELF+SMKQ  I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302

Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
           EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHG+CE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKALE 362

Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
           MFDSMKAE  DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422

Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
           LLSRWGFL+EAYV+IKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482

Query: 484 YVLLSNIYAEEERF 498
           YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496

BLAST of Lsi03G022740 vs. ExPASy TrEMBL
Match: A0A6J1IX07 (pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita maxima OX=3661 GN=LOC111481418 PE=4 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 3.1e-259
Identity = 433/496 (87.30%), Postives = 467/496 (94.15%), Query Frame = 0

Query: 2   IPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSM 61
           I PKL RLSSMKELE A AFIVKAGLCNHIP+MTKLIAFSSLSPSGSLPHAHALFQ+TSM
Sbjct: 10  ILPKLLRLSSMKELELAHAFIVKAGLCNHIPVMTKLIAFSSLSPSGSLPHAHALFQDTSM 69

Query: 62  DDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQ 121
           DDSFICNTMIRAYSN+VFP+KALL+YNHMQR+DVHSDHFTYNFVLKACARAIKC EK+DQ
Sbjct: 70  DDSFICNTMIRAYSNTVFPLKALLVYNHMQRMDVHSDHFTYNFVLKACARAIKCTEKDDQ 129

Query: 122 CFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVS 181
           CFGHDIISRKGAEIHTRVLKLGL QDHH+QNSLLLMYSGCGLVVFAR +F EMTVRS VS
Sbjct: 130 CFGHDIISRKGAEIHTRVLKLGLHQDHHVQNSLLLMYSGCGLVVFARRLFEEMTVRSAVS 189

Query: 182 WNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDV 241
           WNIMMSAYNRVHDYKSAD LL+LMPQTNV SWNTVLARYI LNNLVAARKVFEEMPERDV
Sbjct: 190 WNIMMSAYNRVHDYKSADALLQLMPQTNVTSWNTVLARYIGLNNLVAARKVFEEMPERDV 249

Query: 242 VSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHES 301
           VSWNSIIAGYV  KDY+ A+E+F+SMKQS I +TEVTFISILGACAEMG+LE+GKKIH S
Sbjct: 250 VSWNSIIAGYVKAKDYRRAVEVFHSMKQSGIRSTEVTFISILGACAEMGSLEMGKKIHGS 309

Query: 302 LKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361
           LK +HYRIEGYLGNA+VDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA
Sbjct: 310 LKAEHYRIEGYLGNAMVDMYAKCGELSLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 369

Query: 362 LEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCM 421
           LEMFDSM+A +DDHKPNRVTF+A+LIACSHKGLVAEGRHF +LM+ KYKIMPDLKHYGCM
Sbjct: 370 LEMFDSMEAGNDDHKPNRVTFVAILIACSHKGLVAEGRHFLSLMINKYKIMPDLKHYGCM 429

Query: 422 IDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKD 481
           +DLLSRWGFLQEAY MIK+CPFSSC+V+WRTLLG CRVHRHVELGEE+F +L ELE  KD
Sbjct: 430 VDLLSRWGFLQEAYEMIKSCPFSSCAVVWRTLLGGCRVHRHVELGEEAFCKLGELEARKD 489

Query: 482 GDYVLLSNIYAEEERF 498
           GDYVLLSNIYA+EER+
Sbjct: 490 GDYVLLSNIYAQEERW 505

BLAST of Lsi03G022740 vs. NCBI nr
Match: KGN58697.1 (hypothetical protein Csa_000806 [Cucumis sativus])

HSP 1 Score: 954.1 bits (2465), Expect = 5.5e-274
Identity = 480/596 (80.54%), Postives = 512/596 (85.91%), Query Frame = 0

Query: 1   MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
           M+ PKLHRLS +KELEQAQAFIVKAG  NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1   MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60

Query: 61  MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
           MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61  MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120

Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
           QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180

Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
           SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240

Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
           VVSWNSII+GYVNVKDYKGAL+LF+SMKQ  I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300

Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
           SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360

Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
           ALEMFDSMKAE  DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420

Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
           MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480

Query: 481 DGDYVLLSNIYAEEERFWNTT--------------LAYSSTLHKTHGDPS---------- 540
           DGDYVLLSNIYAEEER W+                 A SS   + HG+            
Sbjct: 481 DGDYVLLSNIYAEEER-WDDVERLRKEMINYGVCKKAGSSHNSRRHGEEEKGLRWTLKSW 540

Query: 541 -----------QSVRRAQPTALVTNCFFMGFSSGFPLEPNTNTNTNTNTNTAFVCQ 562
                      QSVR AQPTA VTNCFFMGFS  FPLEP        NTN AFVCQ
Sbjct: 541 ALFSKFLIYNFQSVRGAQPTAFVTNCFFMGFSC-FPLEP--------NTNIAFVCQ 586

BLAST of Lsi03G022740 vs. NCBI nr
Match: XP_038904117.1 (pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida])

HSP 1 Score: 953.7 bits (2464), Expect = 7.1e-274
Identity = 461/496 (92.94%), Postives = 480/496 (96.77%), Query Frame = 0

Query: 2   IPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSM 61
           I PKLHRLSSMKELEQAQAFIVK GLCNHI IMTKLIAFSSLSPSGSLPH+HALFQETSM
Sbjct: 10  IIPKLHRLSSMKELEQAQAFIVKTGLCNHITIMTKLIAFSSLSPSGSLPHSHALFQETSM 69

Query: 62  DDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQ 121
           DDSFICNTMIRAYSNSVFPVKALLIYNHMQR+DVHSDHFTYNFVLK CARAIKC EK+DQ
Sbjct: 70  DDSFICNTMIRAYSNSVFPVKALLIYNHMQRMDVHSDHFTYNFVLKVCARAIKCTEKDDQ 129

Query: 122 CFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVS 181
           CFGHDIISRKGAEIH+RVLKLGLDQDHH+QNSLLLMYS CGLVVFARL+F+EMT+RS VS
Sbjct: 130 CFGHDIISRKGAEIHSRVLKLGLDQDHHVQNSLLLMYSACGLVVFARLIFDEMTMRSAVS 189

Query: 182 WNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDV 241
           WNIM+SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLN+LVAARKVFEEMPERDV
Sbjct: 190 WNIMVSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNDLVAARKVFEEMPERDV 249

Query: 242 VSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHES 301
           VSWNSIIAGYV VKDYK ALELF+SMKQS I ATEVTFISILGACAEMGALE+GKKIHES
Sbjct: 250 VSWNSIIAGYVKVKDYKRALELFHSMKQSNIRATEVTFISILGACAEMGALEMGKKIHES 309

Query: 302 LKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 361
           LKEKHYRI+GYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA
Sbjct: 310 LKEKHYRIKGYLGNAIVDMYAKCGELHLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERA 369

Query: 362 LEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCM 421
           LEMFDSMKAEHD  KPNR+TFIALLIACSHKGLVAEGRHFFNLM+TKYKI PDLKHYGCM
Sbjct: 370 LEMFDSMKAEHDYQKPNRITFIALLIACSHKGLVAEGRHFFNLMITKYKITPDLKHYGCM 429

Query: 422 IDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKD 481
           IDLLSRWGFLQEAYVMIKTCPFSSCS+LWRTLLG CRVHRHVELGEESFR+LAELEPGKD
Sbjct: 430 IDLLSRWGFLQEAYVMIKTCPFSSCSILWRTLLGGCRVHRHVELGEESFRKLAELEPGKD 489

Query: 482 GDYVLLSNIYAEEERF 498
           GDYVLLSNIYAEEER+
Sbjct: 490 GDYVLLSNIYAEEERW 505

BLAST of Lsi03G022740 vs. NCBI nr
Match: XP_008442325.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis melo] >TYK24912.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 924.1 bits (2387), Expect = 6.0e-265
Identity = 450/494 (91.09%), Postives = 469/494 (94.94%), Query Frame = 0

Query: 4   PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
           PKLHRLSS+KELEQAQAFIVKAG  NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3   PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62

Query: 64  SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
           SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63  SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122

Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
           GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182

Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
           IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242

Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
           WNSIIAGYV VKDYKGALELF+SMKQ  I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302

Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
           EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGHCEKALE 362

Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
           MFDSMKAE  DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422

Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
           LLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482

Query: 484 YVLLSNIYAEEERF 498
           YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496

BLAST of Lsi03G022740 vs. NCBI nr
Match: KAA0044223.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 920.6 bits (2378), Expect = 6.7e-264
Identity = 448/494 (90.69%), Postives = 469/494 (94.94%), Query Frame = 0

Query: 4   PKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDD 63
           PKLHRLSS+KELEQAQAFIVKAG  NHIPIMTKLIAFSSLSPSGSLP A+ALFQETSMDD
Sbjct: 3   PKLHRLSSIKELEQAQAFIVKAGFFNHIPIMTKLIAFSSLSPSGSLPRAYALFQETSMDD 62

Query: 64  SFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCF 123
           SFICNTMIRAYSNSVFPVKALLIYN MQR+DV SDHFTYNFVLKACA AIKC E +DQCF
Sbjct: 63  SFICNTMIRAYSNSVFPVKALLIYNRMQRMDVDSDHFTYNFVLKACATAIKCTEMDDQCF 122

Query: 124 GHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWN 183
           GHDIISRKGAEIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTVR+ VSWN
Sbjct: 123 GHDIISRKGAEIHARILKLGFDQDHHVQNSLLLVYSGRGLVGFARLIFNEMTVRTAVSWN 182

Query: 184 IMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVS 243
           IMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERDVVS
Sbjct: 183 IMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVS 242

Query: 244 WNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLK 303
           WNSIIAGYV VKDYKGALELF+SMKQ  I ATEVTFISILGACAE+GALE GKKIHESLK
Sbjct: 243 WNSIIAGYVKVKDYKGALELFHSMKQWNIRATEVTFISILGACAELGALETGKKIHESLK 302

Query: 304 EKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALE 363
           EKHY+IEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHG+CE+ALE
Sbjct: 303 EKHYKIEGYLGNAIVDMYAKCGELALALEVFNEMEMKPVSCWNAMIMGLAVHGYCEKALE 362

Query: 364 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 423
           MFDSMKAE  DHKPNRVTFIALLIACSHKGLVAEGRHFF+LMVTKYKIMPDLKHYGCMID
Sbjct: 363 MFDSMKAEDGDHKPNRVTFIALLIACSHKGLVAEGRHFFSLMVTKYKIMPDLKHYGCMID 422

Query: 424 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 483
           LLSRWGFL+EAYV+IKTCPFSSCSVLWRTLLG CRVHR VELGEESFRRLAELEPGKDGD
Sbjct: 423 LLSRWGFLEEAYVLIKTCPFSSCSVLWRTLLGGCRVHRRVELGEESFRRLAELEPGKDGD 482

Query: 484 YVLLSNIYAEEERF 498
           YVLLSNIYAEEER+
Sbjct: 483 YVLLSNIYAEEERW 496

BLAST of Lsi03G022740 vs. NCBI nr
Match: XP_004137888.1 (pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus])

HSP 1 Score: 917.1 bits (2369), Expect = 7.4e-263
Identity = 442/497 (88.93%), Postives = 472/497 (94.97%), Query Frame = 0

Query: 1   MIPPKLHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETS 60
           M+ PKLHRLS +KELEQAQAFIVKAG  NHIPI+TKLIAFSSLSP GSLPHA ALFQETS
Sbjct: 1   MMIPKLHRLSCIKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETS 60

Query: 61  MDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKND 120
           MDDSFICNTMIRAYSN+VFP+KALLIYN MQR+DV SDHFTYNFVL+ACARAIKC E +D
Sbjct: 61  MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120

Query: 121 QCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVV 180
           QCFGH IISRKG+EIH R+LKLG DQDHH+QNSLLL+YSG GLV FARL+FNEMTV++ V
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180

Query: 181 SWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERD 240
           SWNIMMSAYNRVHDYKSADVLLE MPQTN +SWNT+LARYIRLNNLVAARKVFEEMPERD
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240

Query: 241 VVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHE 300
           VVSWNSII+GYVNVKDYKGAL+LF+SMKQ  I ATEVTFISILGACAE+GALEIGKKIH+
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300

Query: 301 SLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
           SLKEKHYRIEGYLGNAIVDMY+KCGEL LALEVFNEMEMKPVSCWNAMIMGLAVHGHCER
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360

Query: 361 ALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGC 420
           ALEMFDSMKAE  DHKPNR+TFIALLIACSHKGL+AEGRHFF+LMVTKYKIMPDLKHYGC
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420

Query: 421 MIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGK 480
           MIDLLSRWGFL+EAYVMIKTCPFSSCSVLWRTLLG CR+HRHVELGEESFR+LAELEPGK
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480

Query: 481 DGDYVLLSNIYAEEERF 498
           DGDYVLLSNIYAEEER+
Sbjct: 481 DGDYVLLSNIYAEEERW 497

BLAST of Lsi03G022740 vs. TAIR 10
Match: AT5G15300.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-93
Identity = 182/495 (36.77%), Postives = 299/495 (60.40%), Query Frame = 0

Query: 4   PKL-HRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMD 63
           PKL     +++ L+Q  A +V  GL +++ ++ +LI  +SLS  G+L +AH LF E    
Sbjct: 16  PKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75

Query: 64  DSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQC 123
           D  ICN ++R  + S+ P K + +Y  M++  V  D +T+ FVLKAC+   K   +++  
Sbjct: 76  DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACS---KLEWRSN-- 135

Query: 124 FGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSW 183
                    G   H +V++ G   + +++N+L+L ++ CG +  A  +F++      V+W
Sbjct: 136 ---------GFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 195

Query: 184 NIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVV 243
           + M S Y +      A  L + MP  + ++WN ++   ++   + +AR++F+   E+DVV
Sbjct: 196 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 255

Query: 244 SWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIH-ES 303
           +WN++I+GYVN    K AL +F  M+ +      VT +S+L ACA +G LE GK++H   
Sbjct: 256 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 315

Query: 304 LKEKHYRIEGYLG----NAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGH 363
           L+        Y+G    NA++DMY+KCG +  A+EVF  ++ + +S WN +I+GLA+H H
Sbjct: 316 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 375

Query: 364 CERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKH 423
            E ++EMF+ M  +     PN VTFI +++ACSH G V EGR +F+LM   Y I P++KH
Sbjct: 376 AEGSIEMFEEM--QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 435

Query: 424 YGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELE 483
           YGCM+D+L R G L+EA++ +++      +++WRTLLGAC+++ +VELG+ +  +L  + 
Sbjct: 436 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 493

Query: 484 PGKDGDYVLLSNIYA 493
             + GDYVLLSNIYA
Sbjct: 496 KDESGDYVLLSNIYA 493

BLAST of Lsi03G022740 vs. TAIR 10
Match: AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-91
Identity = 181/492 (36.79%), Postives = 276/492 (56.10%), Query Frame = 0

Query: 8   RLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPS-GSLPHAHALFQETSMDDSFI 67
           R  S+ E++QA AF++K GL +     +KL+AF++ +P   ++ +AH++       + F 
Sbjct: 48  RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107

Query: 68  CNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGHD 127
            N++IRAY+NS  P  AL ++  M    V  D +++ FVLKACA      E         
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE--------- 167

Query: 128 IISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNIMM 187
                G +IH   +K GL  D  ++N+L+ +Y   G    AR V + M VR  VSWN ++
Sbjct: 168 -----GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 227

Query: 188 SAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSWNS 247
           SAY        A  L + M + NV SWN +++ Y     +  A++VF+ MP RDVVSWN+
Sbjct: 228 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 287

Query: 248 IIAGYVNVKDYKGALELFYSMKQSEITATE-VTFISILGACAEMGALEIGKKIHESLKEK 307
           ++  Y +V  Y   LE+F  M        +  T +S+L ACA +G+L  G+ +H  + + 
Sbjct: 288 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 347

Query: 308 HYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMF 367
              IEG+L  A+VDMYSKCG++  ALEVF     + VS WN++I  L+VHG  + ALE+F
Sbjct: 348 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 407

Query: 368 DSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLL 427
             M   ++  KPN +TFI +L AC+H G++ + R  F +M + Y++ P ++HYGCM+DLL
Sbjct: 408 SEM--VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 467

Query: 428 SRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGDYV 487
            R G ++EA  ++   P    S+L  +LLGAC+    +E  E    RL EL       Y 
Sbjct: 468 GRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYA 523

Query: 488 LLSNIYAEEERF 498
            +SN+YA + R+
Sbjct: 528 QMSNLYASDGRW 523

BLAST of Lsi03G022740 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 330.1 bits (845), Expect = 3.6e-90
Identity = 185/525 (35.24%), Postives = 288/525 (54.86%), Query Frame = 0

Query: 6   LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
           L + +++ +++Q  A I++  L   + I  KLI+  SL    +L  A  +F +    +  
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVH 85

Query: 66  ICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCNEKNDQCFGH 125
           +CN++IRA++ +  P +A  +++ MQR  + +D+FTY F+LKAC+             G 
Sbjct: 86  LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------------GQ 145

Query: 126 DIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCG-------LVVF------------ 185
             +      +H  + KLGL  D ++ N+L+  YS CG       + +F            
Sbjct: 146 SWLP-VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 205

Query: 186 --------------ARLVFNEMTVRSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVIS 245
                         AR +F+EM  R ++SWN M+  Y R  +   A  L E MP+ N +S
Sbjct: 206 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 265

Query: 246 WNTVLARYIRLNNLVAARKVFEEM--PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQS 305
           W+T++  Y +  ++  AR +F++M  P ++VV+W  IIAGY      K A  L   M  S
Sbjct: 266 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 325

Query: 306 EITATEVTFISILGACAEMGALEIGKKIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLA 365
            +       ISIL AC E G L +G +IH  LK  +     Y+ NA++DMY+KCG L+ A
Sbjct: 326 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 385

Query: 366 LEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEHDDHKPNRVTFIALLIACS 425
            +VFN++  K +  WN M+ GL VHGH + A+E+F  M+ E    +P++VTFIA+L +C+
Sbjct: 386 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE--GIRPDKVTFIAVLCSCN 445

Query: 426 HKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLW 485
           H GL+ EG  +F  M   Y ++P ++HYGC++DLL R G L+EA  +++T P     V+W
Sbjct: 446 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 505

Query: 486 RTLLGACRVHRHVELGEESFRRLAELEPGKDGDYVLLSNIYAEEE 496
             LLGACR+H  V++ +E    L +L+P   G+Y LLSNIYA  E
Sbjct: 506 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAE 532

BLAST of Lsi03G022740 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 325.9 bits (834), Expect = 6.8e-89
Identity = 180/489 (36.81%), Postives = 280/489 (57.26%), Query Frame = 0

Query: 6   LHRLSSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALFQETSMDDSF 65
           L+   +++ L Q     +K G+        KLI   ++S S +LP+A  L       D+F
Sbjct: 12  LNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAF 71

Query: 66  ICNTMIRAYSNSVFPVKALLIYNHMQRVD-VHSDHFTYNFVLKACARAIKCNEKNDQCFG 125
           + NT++R YS S  P  ++ ++  M R   V  D F++ FV+KA         +N +   
Sbjct: 72  MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV--------ENFRSL- 131

Query: 126 HDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTVRSVVSWNI 185
                R G ++H + LK GL+    +  +L+ MY GCG V FAR VF+EM   ++V+WN 
Sbjct: 132 -----RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 191

Query: 186 MMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEMPERDVVSW 245
           +++A  R +D   A  + + M   N  SWN +LA YI+   L +A+++F EMP RD VSW
Sbjct: 192 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 251

Query: 246 NSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGKKIHESLKE 305
           +++I G  +   +  +   F  ++++ ++  EV+   +L AC++ G+ E GK +H  +++
Sbjct: 252 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 311

Query: 306 KHYRIEGYLGNAIVDMYSKCGELRLALEVFNEM-EMKPVSCWNAMIMGLAVHGHCERALE 365
             Y     + NA++DMYS+CG + +A  VF  M E + +  W +MI GLA+HG  E A+ 
Sbjct: 312 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 371

Query: 366 MFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLKHYGCMID 425
           +F+ M A      P+ ++FI+LL ACSH GL+ EG  +F+ M   Y I P+++HYGCM+D
Sbjct: 372 LFNEMTAY--GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 431

Query: 426 LLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAELEPGKDGD 485
           L  R G LQ+AY  I   P    +++WRTLLGAC  H ++EL E+  +RL EL+P   GD
Sbjct: 432 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 484

Query: 486 YVLLSNIYA 493
            VLLSN YA
Sbjct: 492 LVLLSNAYA 484

BLAST of Lsi03G022740 vs. TAIR 10
Match: AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 322.4 bits (825), Expect = 7.5e-88
Identity = 176/501 (35.13%), Postives = 276/501 (55.09%), Query Frame = 0

Query: 1    MIPPKLHRL----SSMKELEQAQAFIVKAGLCNHIPIMTKLIAFSSLSPSGSLPHAHALF 60
            + PP L ++    S+ K LE A A ++K  L     +M + I  ++ +    L  A +  
Sbjct: 771  LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRLDLAVSTM 830

Query: 61   QETSMDDSFICNTMIRAYSNSVFPVKALLIYNHMQRVDVHSDHFTYNFVLKACARAIKCN 120
             +    + F+ N + + +     P+++L +Y  M R  V    +TY+ ++KA + A    
Sbjct: 831  TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA---- 890

Query: 121  EKNDQCFGHDIISRKGAEIHTRVLKLGLDQDHHIQNSLLLMYSGCGLVVFARLVFNEMTV 180
                        SR G  +   + K G      IQ +L+  YS  G +  AR VF+EM  
Sbjct: 891  ------------SRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 950

Query: 181  RSVVSWNIMMSAYNRVHDYKSADVLLELMPQTNVISWNTVLARYIRLNNLVAARKVFEEM 240
            R  ++W  M+SAY RV D  SA+ L   M + N  + N ++  Y+ L NL  A  +F +M
Sbjct: 951  RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 1010

Query: 241  PERDVVSWNSIIAGYVNVKDYKGALELFYSMKQSEITATEVTFISILGACAEMGALEIGK 300
            P +D++SW ++I GY   K Y+ A+ +FY M +  I   EVT  +++ ACA +G LEIGK
Sbjct: 1011 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1070

Query: 301  KIHESLKEKHYRIEGYLGNAIVDMYSKCGELRLALEVFNEMEMKPVSCWNAMIMGLAVHG 360
            ++H    +  + ++ Y+G+A+VDMYSKCG L  AL VF  +  K + CWN++I GLA HG
Sbjct: 1071 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1130

Query: 361  HCERALEMFDSMKAEHDDHKPNRVTFIALLIACSHKGLVAEGRHFFNLMVTKYKIMPDLK 420
              + AL+MF   K E +  KPN VTF+++  AC+H GLV EGR  +  M+  Y I+ +++
Sbjct: 1131 FAQEALKMF--AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1190

Query: 421  HYGCMIDLLSRWGFLQEAYVMIKTCPFSSCSVLWRTLLGACRVHRHVELGEESFRRLAEL 480
            HYG M+ L S+ G + EA  +I    F   +V+W  LL  CR+H+++ + E +F +L  L
Sbjct: 1191 HYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVL 1250

Query: 481  EPGKDGDYVLLSNIYAEEERF 498
            EP   G Y LL ++YAE+ R+
Sbjct: 1251 EPMNSGYYFLLVSMYAEQNRW 1251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LXF21.7e-9236.77Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana OX... [more]
O493991.6e-9036.79Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX... [more]
Q9LS725.1e-8935.24Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Q9CA549.5e-8836.81Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... [more]
Q56X051.1e-8635.13Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0LD952.6e-27480.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728140 PE=4 SV=1[more]
A0A5D3DN162.9e-26591.09Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B5F52.9e-26591.09pentatricopeptide repeat-containing protein At5g15300-like OS=Cucumis melo OX=36... [more]
A0A5A7TL323.2e-26490.69Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1IX073.1e-25987.30pentatricopeptide repeat-containing protein At5g15300-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
KGN58697.15.5e-27480.54hypothetical protein Csa_000806 [Cucumis sativus][more]
XP_038904117.17.1e-27492.94pentatricopeptide repeat-containing protein At5g15300-like [Benincasa hispida][more]
XP_008442325.16.0e-26591.09PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis m... [more]
KAA0044223.16.7e-26490.69pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004137888.17.4e-26388.93pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT5G15300.11.2e-9336.77Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18840.11.1e-9136.79Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G29230.13.6e-9035.24Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74630.16.8e-8936.81Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G06150.17.5e-8835.13basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 314..521
e-value: 2.5E-33
score: 117.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..130
e-value: 1.2E-10
score: 43.0
coord: 206..306
e-value: 2.3E-22
score: 81.2
coord: 131..205
e-value: 4.7E-9
score: 37.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 344..371
e-value: 1.1E-4
score: 20.1
coord: 211..242
e-value: 6.6E-5
score: 20.8
coord: 315..338
e-value: 0.0018
score: 16.3
coord: 242..273
e-value: 1.2E-5
score: 23.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 239..287
e-value: 1.7E-9
score: 37.7
coord: 63..111
e-value: 2.7E-7
score: 30.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 315..340
e-value: 4.4E-4
score: 20.3
coord: 180..206
e-value: 0.016
score: 15.5
coord: 344..370
e-value: 1.8E-6
score: 27.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..274
score: 10.457138
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..239
score: 9.04313
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 10..216
coord: 209..502
NoneNo IPR availablePANTHERPTHR47928:SF47OS11G0114800 PROTEINcoord: 10..216
coord: 209..502

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G022740.1Lsi03G022740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding