Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCAATATTCCCCAAAGGGAGTCCACTTCCACTCAAAATTTATTCTTCCCTTTTGTTTCTCTCTCTTTAGCTTTCACTTATTCCATGTTCTTTCATTTCCACCACAACTCTCTCTCCTCTTCCATGGTTTTTTATATCCAAACTTTCCTTCTCTTTTTTCTCCCTTTTTTTTCACTCTTATTTTCTTTTCTCCCTCTCTTCCATGGCTATGAACACAAATACTTTATGTCTAGTTTCAACCATGGATCGCCTTTGGTACCACCAAATCATTCTTTGGTCAGATCCCTTAAGTTCCCATCTCCCCAATTTTGTTACCACAACATCTTTTCCTTTCACAAAATTCCCTTCTTGCCCATCTCCCTCCCCTCTCCCATTCTCACCTCTAATGGATCAAACAATAATTCTTCCATCCTCTTTGTCGTCCCCTTCGGTTTCCTCCGACAACATCTCCCTCGTCTCACAGGTAACGTCTCTCTCCTTCATCATACTGTGTGGCACCACTAAATTCAAAAGTTTAAGCTGATTAAGCTATGATATATCAAACATGTTATTTGTCTTCAAGCTTAAAAAATTAACACGACTAATTAAAGAGAAGATAAATGATGAGACTTCGAACATATATAACCTTGTGTTTGCTTTGATATCATGTTAAAAATGGTCTACGTTCGATTTTAACAGGAAGATTATAGTAATGACGAAGACAAAGACAAACAAGATGGGAAGAGAGAGTCAAGCGAAGAAAGTCTCAACAATCTCAAATTTTCAGGTTCAATATAAAATCAAATTTTTTTTATAATTAATTATCATAGTTAAGCTTTGGAAACCCATATATAATGTATGGTATATTGATAAGAATTATTATTATTGTGTGTAGTGGGGAGAAAATTGAACAAATCTATAAGTTGTAAGAGCTTAGGGGAGTTGGAACTTGAAGAAGTTAAAGGGTTTATGGATTTAGGGTTTGAATTTAAGAGAGAAAATTTGAGCCCTCAAATGGTGAAGTTGCTACCTGGTTTACAAAGGCTTAGAAATCAAGTAAACGAACAAAATATCGAAGAATGCAACGACGAAGACGACGACGACGACGACGATAAAGATGAAGAAAATGATGATGATAAGAAGAGAGATATAGCAAGACCATATCTTTCAGAGGCATGGACAATAAAAAGACCAAATTCTCCTCTTCTAAATCTAAGGATGCCAAAGGTTTCTTCAACCTGTGACATGAAGAAACACCTCAAGTCTTGGGCTAAAACTGTTGCATTTGAAATTCAATAAAAATCTTTTAGACTTATTTGAAA
mRNA sequence
CTCCAATATTCCCCAAAGGGAGTCCACTTCCACTCAAAATTTATTCTTCCCTTTTGTTTCTCTCTCTTTAGCTTTCACTTATTCCATGTTCTTTCATTTCCACCACAACTCTCTCTCCTCTTCCATGGTTTTTTATATCCAAACTTTCCTTCTCTTTTTTCTCCCTTTTTTTTCACTCTTATTTTCTTTTCTCCCTCTCTTCCATGGCTATGAACACAAATACTTTATGTCTAGTTTCAACCATGGATCGCCTTTGGTACCACCAAATCATTCTTTGGTCAGATCCCTTAAGTTCCCATCTCCCCAATTTTGTTACCACAACATCTTTTCCTTTCACAAAATTCCCTTCTTGCCCATCTCCCTCCCCTCTCCCATTCTCACCTCTAATGGATCAAACAATAATTCTTCCATCCTCTTTGTCGTCCCCTTCGGTTTCCTCCGACAACATCTCCCTCGTCTCACAGGAAGATTATAGTAATGACGAAGACAAAGACAAACAAGATGGGAAGAGAGAGTCAAGCGAAGAAAGTCTCAACAATCTCAAATTTTCAGTGGGGAGAAAATTGAACAAATCTATAAGTTGTAAGAGCTTAGGGGAGTTGGAACTTGAAGAAGTTAAAGGGTTTATGGATTTAGGGTTTGAATTTAAGAGAGAAAATTTGAGCCCTCAAATGGTGAAGTTGCTACCTGGTTTACAAAGGCTTAGAAATCAAGTAAACGAACAAAATATCGAAGAATGCAACGACGAAGACGACGACGACGACGACGATAAAGATGAAGAAAATGATGATGATAAGAAGAGAGATATAGCAAGACCATATCTTTCAGAGGCATGGACAATAAAAAGACCAAATTCTCCTCTTCTAAATCTAAGGATGCCAAAGGTTTCTTCAACCTGTGACATGAAGAAACACCTCAAGTCTTGGGCTAAAACTGTTGCATTTGAAATTCAATAAAAATCTTTTAGACTTATTTGAAA
Coding sequence (CDS)
ATGGCTATGAACACAAATACTTTATGTCTAGTTTCAACCATGGATCGCCTTTGGTACCACCAAATCATTCTTTGGTCAGATCCCTTAAGTTCCCATCTCCCCAATTTTGTTACCACAACATCTTTTCCTTTCACAAAATTCCCTTCTTGCCCATCTCCCTCCCCTCTCCCATTCTCACCTCTAATGGATCAAACAATAATTCTTCCATCCTCTTTGTCGTCCCCTTCGGTTTCCTCCGACAACATCTCCCTCGTCTCACAGGAAGATTATAGTAATGACGAAGACAAAGACAAACAAGATGGGAAGAGAGAGTCAAGCGAAGAAAGTCTCAACAATCTCAAATTTTCAGTGGGGAGAAAATTGAACAAATCTATAAGTTGTAAGAGCTTAGGGGAGTTGGAACTTGAAGAAGTTAAAGGGTTTATGGATTTAGGGTTTGAATTTAAGAGAGAAAATTTGAGCCCTCAAATGGTGAAGTTGCTACCTGGTTTACAAAGGCTTAGAAATCAAGTAAACGAACAAAATATCGAAGAATGCAACGACGAAGACGACGACGACGACGACGATAAAGATGAAGAAAATGATGATGATAAGAAGAGAGATATAGCAAGACCATATCTTTCAGAGGCATGGACAATAAAAAGACCAAATTCTCCTCTTCTAAATCTAAGGATGCCAAAGGTTTCTTCAACCTGTGACATGAAGAAACACCTCAAGTCTTGGGCTAAAACTGTTGCATTTGAAATTCAATAA
Protein sequence
MAMNTNTLCLVSTMDRLWYHQIILWSDPLSSHLPNFVTTTSFPFTKFPSCPSPSPLPFSPLMDQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVGRKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNIEECNDEDDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKHLKSWAKTVAFEIQ
Homology
BLAST of Lsi03G020370 vs. ExPASy TrEMBL
Match:
A0A1S3B6W6 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103486470 PE=4 SV=1)
HSP 1 Score: 344.7 bits (883), Expect = 3.1e-91
Identity = 201/256 (78.52%), Postives = 223/256 (87.11%), Query Frame = 0
Query: 1 MAMNT-NTLCLVSTMDRLWYHQIILWSDPLSSHLPNFV-TTTSFPFTKFPSCPSPSPLPF 60
MAMNT NTLCLVS MDRLWYHQIIL SDP +SH PNF+ +T+SFPFT F PS P
Sbjct: 1 MAMNTNNTLCLVSAMDRLWYHQIILCSDPFTSHFPNFLNSTSSFPFTNF--VPSS---PL 60
Query: 61 SPLMDQTI-ILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSE-ESLNNLKFS 120
SPLMDQTI ++PSS SS SSDNISLVSQEDY+N+EDKDKQD KRESSE +SLNNLKFS
Sbjct: 61 SPLMDQTIDLVPSSSSS---SSDNISLVSQEDYNNEEDKDKQDAKRESSEDQSLNNLKFS 120
Query: 121 VGRKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNI 180
VGRKLNKS SCKSLGELELEEVKGFMDLGFEFKRE+LSPQMVKL+PGLQRLR Q N+QN+
Sbjct: 121 VGRKLNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVPGLQRLRTQTNKQNL 180
Query: 181 EECNDEDDDD--DDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDM 240
EE +D D DD ++D D+++DDDKKR+IARPYLSEAW I+RPNSPLLNLRMPKVSST DM
Sbjct: 181 EEDDDGDGDDHQENDDDDDDDDDKKREIARPYLSEAWIIRRPNSPLLNLRMPKVSSTSDM 240
Query: 241 KKHLKSWAKTVAFEIQ 251
KKHL+SWAKTVAFEIQ
Sbjct: 241 KKHLRSWAKTVAFEIQ 248
BLAST of Lsi03G020370 vs. ExPASy TrEMBL
Match:
A0A6J1CVW5 (uncharacterized protein LOC111015056 OS=Momordica charantia OX=3673 GN=LOC111015056 PE=4 SV=1)
HSP 1 Score: 297.0 bits (759), Expect = 7.5e-77
Identity = 182/253 (71.94%), Postives = 200/253 (79.05%), Query Frame = 0
Query: 1 MAMNTNTLCLVSTMDRLWYHQIILWSDPL-SSHLPNFVTTTSFPFTKFPSCPSPSPLPFS 60
MAMNT TLCLVS MDRLWYHQIILWSDPL SSHLPNF T PFTKFPSCPSPS S
Sbjct: 1 MAMNTCTLCLVSAMDRLWYHQIILWSDPLSSSHLPNFDQT--LPFTKFPSCPSPS----S 60
Query: 61 PLMDQTIILPSSLSSPSVSS-DNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVG 120
PL ++TII PSS S SVSS D+ISL S E SND+DK+K+ KRES+E+ NNLK SVG
Sbjct: 61 PLTNETII-PSSFSXLSVSSVDDISLDSXEGCSNDDDKEKEVEKRESTEKMPNNLKSSVG 120
Query: 121 RKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNE-QNIE 180
KLNKS SC+SLGELELEEVKGF+DLGFEFKRENL+PQMV LLPGLQRL +N+ + +E
Sbjct: 121 IKLNKSKSCRSLGELELEEVKGFIDLGFEFKRENLNPQMVTLLPGLQRLGIPINKRKQLE 180
Query: 181 ECNDEDDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKH 240
E NDE +D D+D KRD +RPYLSEAWTIKRPNSPLL LRM KVSST DMKKH
Sbjct: 181 EENDEXND---------DEDHKRDKSRPYLSEAWTIKRPNSPLLQLRMSKVSSTSDMKKH 237
Query: 241 LKSWAKTVAFEIQ 251
LK WAKTVA EIQ
Sbjct: 241 LKFWAKTVASEIQ 237
BLAST of Lsi03G020370 vs. ExPASy TrEMBL
Match:
A0A5D3DPB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002450 PE=4 SV=1)
HSP 1 Score: 273.9 bits (699), Expect = 6.8e-70
Identity = 157/193 (81.35%), Postives = 175/193 (90.67%), Query Frame = 0
Query: 62 MDQTI-ILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSE-ESLNNLKFSVGR 121
MDQTI ++PSS SS SSDNISLVSQEDY+N+EDKDKQD KRESSE +SLNNLKFSVGR
Sbjct: 1 MDQTIDLVPSSSSS---SSDNISLVSQEDYNNEEDKDKQDAKRESSEDQSLNNLKFSVGR 60
Query: 122 KLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNIEEC 181
KLNKS SCKSLGELELEEVKGFMDLGFEFKRE+LSPQMVKL+PGLQRLR Q N+QN+EE
Sbjct: 61 KLNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVPGLQRLRTQTNKQNLEED 120
Query: 182 NDEDDDD--DDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKH 241
+D D DD ++D D+++DDDKKR+IARPYLSEAW I+RPNSPLLNLRMPKVSST DMKKH
Sbjct: 121 DDGDGDDHQENDDDDDDDDDKKREIARPYLSEAWIIRRPNSPLLNLRMPKVSSTSDMKKH 180
Query: 242 LKSWAKTVAFEIQ 251
L+SWAKTVAFEIQ
Sbjct: 181 LRSWAKTVAFEIQ 190
BLAST of Lsi03G020370 vs. ExPASy TrEMBL
Match:
A0A6J1J6B4 (uncharacterized protein LOC111482158 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482158 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68
Identity = 161/248 (64.92%), Postives = 186/248 (75.00%), Query Frame = 0
Query: 4 NTNTLCLVSTMDRLWYHQIILWS-DPLSSHLPNFVTTTSFPFTKFPSCPSPSPLPFSPLM 63
NTNTLCLVS MDRLW+HQIIL S P SHL +FPF+ F
Sbjct: 5 NTNTLCLVSAMDRLWHHQIILSSPHPSPSHL-----HPTFPFSNF--------------- 64
Query: 64 DQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVGRKLN 123
PSSLSS + D+ SLVSQED SND DK KQDGK E+ EESL + +F++ +KLN
Sbjct: 65 ------PSSLSSDRIFLDDTSLVSQEDDSNDGDKYKQDGKEEAMEESLTDPEFTMRKKLN 124
Query: 124 KSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNIEECNDE 183
K++SCKSLGELE+EEVKGFMDLGF+F+ ENLSPQMVKL+PGLQR + ++++QN+E D+
Sbjct: 125 KAMSCKSLGELEMEEVKGFMDLGFQFRTENLSPQMVKLVPGLQRFKTRMDKQNLE---DD 184
Query: 184 DDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKHLKSWA 243
DDDDDDD D ENDD KKRDIARPYLSEAWTI RPNSPLL LRMPKVSST DMKK LKSWA
Sbjct: 185 DDDDDDDAD-ENDDHKKRDIARPYLSEAWTINRPNSPLLTLRMPKVSSTSDMKKRLKSWA 222
Query: 244 KTVAFEIQ 251
+TVA EIQ
Sbjct: 245 RTVAIEIQ 222
BLAST of Lsi03G020370 vs. ExPASy TrEMBL
Match:
A0A6J1J2S9 (uncharacterized protein LOC111482158 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482158 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 6.6e-65
Identity = 154/248 (62.10%), Postives = 178/248 (71.77%), Query Frame = 0
Query: 4 NTNTLCLVSTMDRLWYHQIILWS-DPLSSHLPNFVTTTSFPFTKFPSCPSPSPLPFSPLM 63
NTNTLCLVS MDRLW+HQIIL S P SHL +FPF+ F
Sbjct: 5 NTNTLCLVSAMDRLWHHQIILSSPHPSPSHL-----HPTFPFSNF--------------- 64
Query: 64 DQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVGRKLN 123
PSSLSS + D+ SLVSQED SND DK KQDGK E+ EESL + +F++ +KLN
Sbjct: 65 ------PSSLSSDRIFLDDTSLVSQEDDSNDGDKYKQDGKEEAMEESLTDPEFTMRKKLN 124
Query: 124 KSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNIEECNDE 183
K++SCKSLGELE+EEVKGFMDLGF+F+ ENLSPQMVKL+PGLQR + ++++QN+E
Sbjct: 125 KAMSCKSLGELEMEEVKGFMDLGFQFRTENLSPQMVKLVPGLQRFKTRMDKQNLE----- 184
Query: 184 DDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKHLKSWA 243
DDD DDDKKRDIARPYLSEAWTI RPNSPLL LRMPKVSST DMKK LKSWA
Sbjct: 185 ----DDD-----DDDKKRDIARPYLSEAWTINRPNSPLLTLRMPKVSSTSDMKKRLKSWA 212
Query: 244 KTVAFEIQ 251
+TVA EIQ
Sbjct: 245 RTVAIEIQ 212
BLAST of Lsi03G020370 vs. NCBI nr
Match:
XP_038903410.1 (uncharacterized protein LOC120090009 isoform X1 [Benincasa hispida])
HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-105
Identity = 216/251 (86.06%), Postives = 229/251 (91.24%), Query Frame = 0
Query: 1 MAMNTNTLCLVSTMDRLWYHQIILWSDPLSSHLPNFVTTTSFPFTKFPSCPSPSPLPFSP 60
MAMNTNTLCLVSTMDRLWYHQIILWSDPLSSH+PNF+ T+SF FT FPS PSPSPLPFSP
Sbjct: 1 MAMNTNTLCLVSTMDRLWYHQIILWSDPLSSHIPNFLNTSSFHFTNFPSSPSPSPLPFSP 60
Query: 61 LMDQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVGRK 120
LMDQ+ ILPSS SPSVSSDNISLVSQ+ YSNDEDK+KQDGK+E SEESLNNLK SVG K
Sbjct: 61 LMDQS-ILPSSSPSPSVSSDNISLVSQDYYSNDEDKNKQDGKKEPSEESLNNLKLSVGTK 120
Query: 121 LNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLR-NQVNEQNIEEC 180
LNKS SCKSLGELELEEVKGFMDLGFEFK+ENLSP+MVKLLPGLQRLR +Q+N+QN+EE
Sbjct: 121 LNKSTSCKSLGELELEEVKGFMDLGFEFKKENLSPRMVKLLPGLQRLRTDQINKQNLEE- 180
Query: 181 NDEDDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKHLK 240
EDDDDDD ENDDDKKRDIARPYLSEAWTIKR NSPLLNLRMPKVSST DMKKHLK
Sbjct: 181 --EDDDDDD----ENDDDKKRDIARPYLSEAWTIKRSNSPLLNLRMPKVSSTSDMKKHLK 240
Query: 241 SWAKTVAFEIQ 251
SWAKTVAFEIQ
Sbjct: 241 SWAKTVAFEIQ 243
BLAST of Lsi03G020370 vs. NCBI nr
Match:
XP_008442668.1 (PREDICTED: putative uncharacterized protein YGR160W [Cucumis melo])
HSP 1 Score: 344.7 bits (883), Expect = 6.5e-91
Identity = 201/256 (78.52%), Postives = 223/256 (87.11%), Query Frame = 0
Query: 1 MAMNT-NTLCLVSTMDRLWYHQIILWSDPLSSHLPNFV-TTTSFPFTKFPSCPSPSPLPF 60
MAMNT NTLCLVS MDRLWYHQIIL SDP +SH PNF+ +T+SFPFT F PS P
Sbjct: 1 MAMNTNNTLCLVSAMDRLWYHQIILCSDPFTSHFPNFLNSTSSFPFTNF--VPSS---PL 60
Query: 61 SPLMDQTI-ILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSE-ESLNNLKFS 120
SPLMDQTI ++PSS SS SSDNISLVSQEDY+N+EDKDKQD KRESSE +SLNNLKFS
Sbjct: 61 SPLMDQTIDLVPSSSSS---SSDNISLVSQEDYNNEEDKDKQDAKRESSEDQSLNNLKFS 120
Query: 121 VGRKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNI 180
VGRKLNKS SCKSLGELELEEVKGFMDLGFEFKRE+LSPQMVKL+PGLQRLR Q N+QN+
Sbjct: 121 VGRKLNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVPGLQRLRTQTNKQNL 180
Query: 181 EECNDEDDDD--DDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDM 240
EE +D D DD ++D D+++DDDKKR+IARPYLSEAW I+RPNSPLLNLRMPKVSST DM
Sbjct: 181 EEDDDGDGDDHQENDDDDDDDDDKKREIARPYLSEAWIIRRPNSPLLNLRMPKVSSTSDM 240
Query: 241 KKHLKSWAKTVAFEIQ 251
KKHL+SWAKTVAFEIQ
Sbjct: 241 KKHLRSWAKTVAFEIQ 248
BLAST of Lsi03G020370 vs. NCBI nr
Match:
XP_004137815.3 (uncharacterized protein LOC101215662 [Cucumis sativus] >KGN59144.2 hypothetical protein Csa_001080 [Cucumis sativus])
HSP 1 Score: 320.5 bits (820), Expect = 1.3e-83
Identity = 197/258 (76.36%), Postives = 219/258 (84.88%), Query Frame = 0
Query: 1 MAMNT-NTLCLVSTMDRLWYHQIILW-SDPL-SSHLPNFV-TTTSFPFTKFPSCPSPSPL 60
MAMNT NTLCLVS MDRLWYHQIIL SDPL +SH PN + +T+SFPFT F PS
Sbjct: 1 MAMNTNNTLCLVSAMDRLWYHQIILCSSDPLFTSHFPNLLNSTSSFPFTNF--LPSS--- 60
Query: 61 PFSPLMDQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSE-ESLNNLKF 120
P SPL+DQT ILPSS SS SSDNISLVSQE+YSN+EDK+KQD KRE SE +SLN LKF
Sbjct: 61 PLSPLVDQT-ILPSSSSS---SSDNISLVSQENYSNEEDKNKQDAKRELSEDQSLNGLKF 120
Query: 121 SVGRKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQN 180
SVGRKLNKS SCKSLGELELEEVKGFMDLGFEFKRE+LSPQMVKL+PGLQRLR Q+N+QN
Sbjct: 121 SVGRKLNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVPGLQRLRTQINKQN 180
Query: 181 IEECNDEDDDDDDDKDEENDDD---KKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTC 240
+E+ DED D D DK+ ++DDD KKR+IARPYLSEAW I+RPNSPLL+LRMPKVSST
Sbjct: 181 LED--DEDGDGDHDKENDDDDDDKNKKREIARPYLSEAWIIRRPNSPLLDLRMPKVSSTS 240
Query: 241 DMKKHLKSWAKTVAFEIQ 251
DMKKHL+SWAKTVAFEIQ
Sbjct: 241 DMKKHLRSWAKTVAFEIQ 247
BLAST of Lsi03G020370 vs. NCBI nr
Match:
XP_022145659.1 (uncharacterized protein LOC111015056 [Momordica charantia])
HSP 1 Score: 296.2 bits (757), Expect = 2.6e-76
Identity = 181/253 (71.54%), Postives = 200/253 (79.05%), Query Frame = 0
Query: 1 MAMNTNTLCLVSTMDRLWYHQIILWSDPL-SSHLPNFVTTTSFPFTKFPSCPSPSPLPFS 60
MAMNT TLCLVS MDRLWYHQIILWSDPL SSHLPNF T PFTKFPSCPSPS S
Sbjct: 1 MAMNTCTLCLVSAMDRLWYHQIILWSDPLSSSHLPNFDQT--LPFTKFPSCPSPS----S 60
Query: 61 PLMDQTIILPSSLSSPSVSS-DNISLVSQEDYSNDEDKDKQDGKRESSEESLNNLKFSVG 120
PL ++TII PSS S SVSS ++ISL S E SND+DK+K+ KRES+E+ NNLK SVG
Sbjct: 61 PLTNETII-PSSFSXLSVSSVBDISLDSXEGCSNDDDKEKEVEKRESTEKMPNNLKSSVG 120
Query: 121 RKLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNE-QNIE 180
KLNKS SC+SLGELELEEVKGF+DLGFEFKRENL+PQMV LLPGLQRL +N+ + +E
Sbjct: 121 IKLNKSKSCRSLGELELEEVKGFIDLGFEFKRENLNPQMVTLLPGLQRLGIPINKRKQLE 180
Query: 181 ECNDEDDDDDDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKH 240
E NDE +D D+D KRD +RPYLSEAWTIKRPNSPLL LRM KVSST DMKKH
Sbjct: 181 EENDEXND---------DEDHKRDKSRPYLSEAWTIKRPNSPLLQLRMSKVSSTSDMKKH 237
Query: 241 LKSWAKTVAFEIQ 251
LK WAKTVA EIQ
Sbjct: 241 LKFWAKTVASEIQ 237
BLAST of Lsi03G020370 vs. NCBI nr
Match:
KAA0044020.1 (putative uncharacterized protein [Cucumis melo var. makuwa] >TYK25120.1 hypothetical protein E5676_scaffold352G002450 [Cucumis melo var. makuwa])
HSP 1 Score: 273.9 bits (699), Expect = 1.4e-69
Identity = 157/193 (81.35%), Postives = 175/193 (90.67%), Query Frame = 0
Query: 62 MDQTI-ILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSE-ESLNNLKFSVGR 121
MDQTI ++PSS SS SSDNISLVSQEDY+N+EDKDKQD KRESSE +SLNNLKFSVGR
Sbjct: 1 MDQTIDLVPSSSSS---SSDNISLVSQEDYNNEEDKDKQDAKRESSEDQSLNNLKFSVGR 60
Query: 122 KLNKSISCKSLGELELEEVKGFMDLGFEFKRENLSPQMVKLLPGLQRLRNQVNEQNIEEC 181
KLNKS SCKSLGELELEEVKGFMDLGFEFKRE+LSPQMVKL+PGLQRLR Q N+QN+EE
Sbjct: 61 KLNKSTSCKSLGELELEEVKGFMDLGFEFKRESLSPQMVKLVPGLQRLRTQTNKQNLEED 120
Query: 182 NDEDDDD--DDDKDEENDDDKKRDIARPYLSEAWTIKRPNSPLLNLRMPKVSSTCDMKKH 241
+D D DD ++D D+++DDDKKR+IARPYLSEAW I+RPNSPLLNLRMPKVSST DMKKH
Sbjct: 121 DDGDGDDHQENDDDDDDDDDKKREIARPYLSEAWIIRRPNSPLLNLRMPKVSSTSDMKKH 180
Query: 242 LKSWAKTVAFEIQ 251
L+SWAKTVAFEIQ
Sbjct: 181 LRSWAKTVAFEIQ 190
BLAST of Lsi03G020370 vs. TAIR 10
Match:
AT2G42760.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )
HSP 1 Score: 52.8 bits (125), Expect = 4.8e-07
Identity = 61/206 (29.61%), Postives = 103/206 (50.00%), Query Frame = 0
Query: 54 SPLPFSPLMDQTIILPSSLSSPSVSSDNISLVSQEDYSNDEDKDKQDGKRESSEESLNNL 113
SP P+ + L + LS V++ ++ +E +++++ ++ K++S N+
Sbjct: 88 SPRSVLPVKPTPMKLQTILSGKEVNA--FTIAERERLLSEKEEQRKKKKKKS------NV 147
Query: 114 KFSVGRKLNKSISCKSLGELELEEVKGFMDLGFEFKR-ENLSPQMVKLLPGLQRLRNQVN 173
+ G KS+ +LE EE+KGFMDLGF F ++ +V +LPGLQRL +
Sbjct: 148 RTRKG---------KSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKK-- 207
Query: 174 EQNIEECNDEDDDDDDDKDEENDDDKKRDIARPYLSEAWTI------KRPNSPLLNLRM- 233
D+ +++++EE D ARPYLSEAW K+ +P + R+
Sbjct: 208 --------DDGVTKEEEEEEEEDKIGGNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVP 266
Query: 234 -PKVSSTCDMKKHLKSWAKTVAFEIQ 251
P +S D+K +L+ WA VA I+
Sbjct: 268 APAAASEVDLKDNLRLWAHAVASTIR 266
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3B6W6 | 3.1e-91 | 78.52 | Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103486470 PE=4 SV=1 | [more] |
A0A6J1CVW5 | 7.5e-77 | 71.94 | uncharacterized protein LOC111015056 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
A0A5D3DPB9 | 6.8e-70 | 81.35 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1J6B4 | 1.7e-68 | 64.92 | uncharacterized protein LOC111482158 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1J2S9 | 6.6e-65 | 62.10 | uncharacterized protein LOC111482158 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903410.1 | 2.1e-105 | 86.06 | uncharacterized protein LOC120090009 isoform X1 [Benincasa hispida] | [more] |
XP_008442668.1 | 6.5e-91 | 78.52 | PREDICTED: putative uncharacterized protein YGR160W [Cucumis melo] | [more] |
XP_004137815.3 | 1.3e-83 | 76.36 | uncharacterized protein LOC101215662 [Cucumis sativus] >KGN59144.2 hypothetical ... | [more] |
XP_022145659.1 | 2.6e-76 | 71.54 | uncharacterized protein LOC111015056 [Momordica charantia] | [more] |
KAA0044020.1 | 1.4e-69 | 81.35 | putative uncharacterized protein [Cucumis melo var. makuwa] >TYK25120.1 hypothet... | [more] |
Match Name | E-value | Identity | Description | |
AT2G42760.1 | 4.8e-07 | 29.61 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685... | [more] |