Lsi03G020270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G020270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF584
Location	chr03: 31646480 .. 31646995 (-)
RNA-Seq Expression	Lsi03G020270
Synteny	Lsi03G020270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAGGAGAGGCTTAGGATTTGGATTTGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCGGATACAGTTCGCCGTCCTGAATCTTCTGTCGATAGCCTCTTCGAATTCGACGAGGCGGATATCTGGACCTCCGCTCCAACTCCGCCGTCGGAATCGAGGAAGATCTTTCCGATCTCGAAGAAACTTCCGAAGAGGAGTGGCCCTGCGACGGCGGCGGAGAAGGCGGTGAAGGCATCTTCGTCATTGCCAGTCAATATTCCGGACTGGTCGAAGATTCTGCAGAACGATCAGAACAAGCACGGCCGGAGAGAAGTAGCGGAGGAGGATTTCGACGATAGCGACGACGACGATGACGACATTCGCCGGGCGCCGCCGCATGAGTATTTGGCGCGACGGCGAGGCGATTCGTTTTCAGTTCACGAAGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGAAAAAAACTGGGTTCGAAGATTAA

mRNA sequence

ATGGCTTCAAGGAGAGGCTTAGGATTTGGATTTGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCGGATACAGTTCGCCGTCCTGAATCTTCTGTCGATAGCCTCTTCGAATTCGACGAGGCGGATATCTGGACCTCCGCTCCAACTCCGCCGTCGGAATCGAGGAAGATCTTTCCGATCTCGAAGAAACTTCCGAAGAGGAGTGGCCCTGCGACGGCGGCGGAGAAGGCGGTGAAGGCATCTTCGTCATTGCCAGTCAATATTCCGGACTGGTCGAAGATTCTGCAGAACGATCAGAACAAGCACGGCCGGAGAGAAGTAGCGGAGGAGGATTTCGACGATAGCGACGACGACGATGACGACATTCGCCGGGCGCCGCCGCATGAGTATTTGGCGCGACGGCGAGGCGATTCGTTTTCAGTTCACGAAGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGAAAAAAACTGGGTTCGAAGATTAA

Coding sequence (CDS)

ATGGCTTCAAGGAGAGGCTTAGGATTTGGATTTGGTTTTCACTCCAAACCTAACTACATCTATCCGGCGTCGGATACAGTTCGCCGTCCTGAATCTTCTGTCGATAGCCTCTTCGAATTCGACGAGGCGGATATCTGGACCTCCGCTCCAACTCCGCCGTCGGAATCGAGGAAGATCTTTCCGATCTCGAAGAAACTTCCGAAGAGGAGTGGCCCTGCGACGGCGGCGGAGAAGGCGGTGAAGGCATCTTCGTCATTGCCAGTCAATATTCCGGACTGGTCGAAGATTCTGCAGAACGATCAGAACAAGCACGGCCGGAGAGAAGTAGCGGAGGAGGATTTCGACGATAGCGACGACGACGATGACGACATTCGCCGGGCGCCGCCGCATGAGTATTTGGCGCGACGGCGAGGCGATTCGTTTTCAGTTCACGAAGGGATCGGAAGAACGCTGAAGGGCAGAGATTTGAGAATGGTGAGAAATGCAATTTGGAAAAAAACTGGGTTCGAAGATTAA

Protein sequence

MASRRGLGFGFGFHSKPNYIYPASDTVRRPESSVDSLFEFDEADIWTSAPTPPSESRKIFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDDDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED

Homology

[Close]

BLAST of Lsi03G020270 vs. ExPASy TrEMBL
Match: A0A5A7TR07 (Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002540 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MASRR-GLGFGFGFHSKPNYIYPASDTVRRPESSVDS-LFEFDEADIWTSA----PTPPS 60
           MASRR GLGFGFGFHSKPNYIYPAS+++R  ESS ++ LFEFDE+DIWTSA    PTPP 
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASESLRYSESSTENGLFEFDESDIWTSATTTTPTPPM 60

Query: 61  ESRKIFPISKKLPKRSG-PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEED 120
           ESRKIFPISKKLPKRSG  ATA EKAVKASSSLPVNIPDWSKILQ DQNKHGRR VAEED
Sbjct: 61  ESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVAEED 120

Query: 121 FDDSDDDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           FDDSDD+DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED
Sbjct: 121 FDDSDDEDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 178

[Close]

BLAST of Lsi03G020270 vs. ExPASy TrEMBL
Match: A0A1S3B5S2 (uncharacterized protein LOC103486480 OS=Cucumis melo OX=3656 GN=LOC103486480 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MASRR-GLGFGFGFHSKPNYIYPASDTVRRPESSVDS-LFEFDEADIWTSA----PTPPS 60
           MASRR GLGFGFGFHSKPNYIYPAS+++R  ESS ++ LFEFDE+DIWTSA    PTPP 
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASESLRYSESSTENGLFEFDESDIWTSATTTTPTPPM 60

Query: 61  ESRKIFPISKKLPKRSG-PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEED 120
           ESRKIFPISKKLPKRSG  ATA EKAVKASSSLPVNIPDWSKILQ DQNKHGRR VAEED
Sbjct: 61  ESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVAEED 120

Query: 121 FDDSDDDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           FDDSDD+DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED
Sbjct: 121 FDDSDDEDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 178

[Close]

BLAST of Lsi03G020270 vs. ExPASy TrEMBL
Match: A0A0A0LDH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739050 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.7e-77
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MASRR-GLGFGFGFHSKPNYIYPASDTVRRPESSVD-SLFEFDEADIWTS----APTPPS 60
           MASRR GLGFGFGFHSKPNYIYPASD++R  ESS D +LFEFDE+DIWTS    APTPP 
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASDSLRCSESSTDNNLFEFDESDIWTSATTTAPTPPM 60

Query: 61  ESRKIFPISKKLPKRSG-PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEED 120
           ESRKIFPISKKLPKRSG  ATA EKAVKASSSLPVNIPDWSKILQ DQNKHGRR VA+ED
Sbjct: 61  ESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVADED 120

Query: 121 FDDSDD-DDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           FDDSDD DDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED
Sbjct: 121 FDDSDDGDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 179

[Close]

BLAST of Lsi03G020270 vs. ExPASy TrEMBL
Match: A0A6J1L0M7 (uncharacterized protein LOC111498772 OS=Cucurbita maxima OX=3661 GN=LOC111498772 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 149/173 (86.13%), Postives = 159/173 (91.91%), Query Frame = 0


Query: 1   MASRRGLGFGFGFHSKPNYIYPASD--TVRRPESSVDSLFEFDEADIWTSAPTPPSESRK 60
           MASRRGL FGFGFHSKPNYIYPAS+   V RPESS D+LF+F+EADIWTSA TPP ESRK
Sbjct: 1   MASRRGLAFGFGFHSKPNYIYPASEPPAVLRPESSADNLFDFNEADIWTSAQTPPIESRK 60

Query: 61  IFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSD 120
           IFPISKKLPKRS  + AAEK VKASSSLPVNIPDWSKILQ+DQ+KHGRRE AEEDFDDSD
Sbjct: 61  IFPISKKLPKRS--SAAAEKTVKASSSLPVNIPDWSKILQSDQSKHGRREAAEEDFDDSD 120

Query: 121 DDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           DDDDD+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DDDDDMWRAPPHEYLARRRGESFSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 171

[Close]

BLAST of Lsi03G020270 vs. ExPASy TrEMBL
Match: A0A6J1FKK7 (uncharacterized protein LOC111446095 OS=Cucurbita moschata OX=3662 GN=LOC111446095 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.2e-75
Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MASRRGLGFGFGFHSKPNYIYPASD--TVRRPESSVDSLFEFDEADIWTSAPTPPSESRK 60
           MASRRGL FGFGFHSKPNYIYPAS+   VRRPESS D+LF+F+EADIWTSA T P ESRK
Sbjct: 1   MASRRGLAFGFGFHSKPNYIYPASEPPAVRRPESSADNLFDFEEADIWTSAQTSPIESRK 60

Query: 61  IFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSD 120
           IFPISKKLPKRS  + AAEK VKASSSLPVNIPDWSKILQ+DQ+KHG RE AEEDFDDSD
Sbjct: 61  IFPISKKLPKRS--SAAAEKTVKASSSLPVNIPDWSKILQSDQSKHGPREAAEEDFDDSD 120

Query: 121 DDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           DDDDD+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DDDDDMWRAPPHEYLARRRGESFSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 171

[Close]

BLAST of Lsi03G020270 vs. NCBI nr
Match: XP_038905106.1 (uncharacterized protein LOC120091239 [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 2.7e-88
Identity = 164/171 (95.91%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MASRRGLGFGFGFHSKPNYIYPASDTVRRPESSVDSLFEFDEADIWTSAPTPPSESRKIF 60
           MASRRGLGFGFGFHSKPNYIYPASDTVRRPESS D+LFEFDE+DIWTS PTPPSESRKIF
Sbjct: 1   MASRRGLGFGFGFHSKPNYIYPASDTVRRPESSADNLFEFDESDIWTSGPTPPSESRKIF 60

Query: 61  PISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDDD 120
           PISKKLPKRSGPATAAEK+VKASSSLPVNIPDWSKILQ DQNKHGRREVAEEDFDDSDDD
Sbjct: 61  PISKKLPKRSGPATAAEKSVKASSSLPVNIPDWSKILQKDQNKHGRREVAEEDFDDSDDD 120

Query: 121 DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 171

[Close]

BLAST of Lsi03G020270 vs. NCBI nr
Match: XP_008442681.1 (PREDICTED: uncharacterized protein LOC103486480 [Cucumis melo] >KAA0044011.1 Senescence regulator [Cucumis melo var. makuwa] >TYK25129.1 Senescence regulator [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.8e-77
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MASRR-GLGFGFGFHSKPNYIYPASDTVRRPESSVDS-LFEFDEADIWTSA----PTPPS 60
           MASRR GLGFGFGFHSKPNYIYPAS+++R  ESS ++ LFEFDE+DIWTSA    PTPP 
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASESLRYSESSTENGLFEFDESDIWTSATTTTPTPPM 60

Query: 61  ESRKIFPISKKLPKRSG-PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEED 120
           ESRKIFPISKKLPKRSG  ATA EKAVKASSSLPVNIPDWSKILQ DQNKHGRR VAEED
Sbjct: 61  ESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVAEED 120

Query: 121 FDDSDDDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           FDDSDD+DDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED
Sbjct: 121 FDDSDDEDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 178

[Close]

BLAST of Lsi03G020270 vs. NCBI nr
Match: KAG7028018.1 (hypothetical protein SDJN02_09198, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 150/173 (86.71%), Postives = 159/173 (91.91%), Query Frame = 0


Query: 1   MASRRGLGFGFGFHSKPNYIYPASD--TVRRPESSVDSLFEFDEADIWTSAPTPPSESRK 60
           MASRRGL FGFGFHSKPNYIYPAS+   VRRPESS D+LF+FDEADIWTSA TPP ESRK
Sbjct: 1   MASRRGLAFGFGFHSKPNYIYPASEPPAVRRPESSADNLFDFDEADIWTSAQTPPIESRK 60

Query: 61  IFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSD 120
           IFPISKKLPKRS    AAEK VKASSSLPVNIPDWSKILQ+D++KHGRRE AEEDFDDSD
Sbjct: 61  IFPISKKLPKRS--TAAAEKTVKASSSLPVNIPDWSKILQSDKSKHGRREAAEEDFDDSD 120

Query: 121 DDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           DDDDD+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DDDDDMWRAPPHEYLARRRGESFSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 171

[Close]

BLAST of Lsi03G020270 vs. NCBI nr
Match: XP_004137823.1 (uncharacterized protein LOC101217342 [Cucumis sativus] >KGN58959.1 hypothetical protein Csa_001927 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MASRR-GLGFGFGFHSKPNYIYPASDTVRRPESSVD-SLFEFDEADIWTS----APTPPS 60
           MASRR GLGFGFGFHSKPNYIYPASD++R  ESS D +LFEFDE+DIWTS    APTPP 
Sbjct: 1   MASRRGGLGFGFGFHSKPNYIYPASDSLRCSESSTDNNLFEFDESDIWTSATTTAPTPPM 60

Query: 61  ESRKIFPISKKLPKRSG-PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEED 120
           ESRKIFPISKKLPKRSG  ATA EKAVKASSSLPVNIPDWSKILQ DQNKHGRR VA+ED
Sbjct: 61  ESRKIFPISKKLPKRSGSAATAVEKAVKASSSLPVNIPDWSKILQKDQNKHGRRAVADED 120

Query: 121 FDDSDD-DDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           FDDSDD DDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED
Sbjct: 121 FDDSDDGDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 179

[Close]

BLAST of Lsi03G020270 vs. NCBI nr
Match: XP_023005909.1 (uncharacterized protein LOC111498772 [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 6.9e-76
Identity = 149/173 (86.13%), Postives = 159/173 (91.91%), Query Frame = 0


Query: 1   MASRRGLGFGFGFHSKPNYIYPASD--TVRRPESSVDSLFEFDEADIWTSAPTPPSESRK 60
           MASRRGL FGFGFHSKPNYIYPAS+   V RPESS D+LF+F+EADIWTSA TPP ESRK
Sbjct: 1   MASRRGLAFGFGFHSKPNYIYPASEPPAVLRPESSADNLFDFNEADIWTSAQTPPIESRK 60

Query: 61  IFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSD 120
           IFPISKKLPKRS  + AAEK VKASSSLPVNIPDWSKILQ+DQ+KHGRRE AEEDFDDSD
Sbjct: 61  IFPISKKLPKRS--SAAAEKTVKASSSLPVNIPDWSKILQSDQSKHGRREAAEEDFDDSD 120

Query: 121 DDDDDIRRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           DDDDD+ RAPPHEYLARRRG+SFSVHEGIGRTLKGRDLRMVRNAIW+KTGFED
Sbjct: 121 DDDDDMWRAPPHEYLARRRGESFSVHEGIGRTLKGRDLRMVRNAIWEKTGFED 171

[Close]

BLAST of Lsi03G020270 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-33
Identity = 80/167 (47.90%), Postives = 106/167 (63.47%), Query Frame = 0


Query: 13  FHSKPNYIYPASDTVRRPESSVDSLFEFDEADIWT--SAPTPPS-ESRKIFPISKKLPKR 72
           F  KP YIYP      +PE S +++FEFDE+DI        P S ++++   IS+   K 
Sbjct: 7   FFVKPKYIYPEP----KPEMSDENVFEFDESDIHNLGDHQLPNSFDAKRSISISRLRRKP 66

Query: 73  SGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDDDDDDI----- 132
           +    +  + +  + SLPVNIPDWSKIL+++   H    + ++D DD D+DDDD      
Sbjct: 67  TKTGDSGNREITKTGSLPVNIPDWSKILKSEYRGHA---IPDDDSDDDDEDDDDSNDGGR 126

Query: 133 RRAPPHEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           R  PPHEYLARRRG SF+VHEGIG T KGRDLR +RNAIW+K GF+D
Sbjct: 127 RMIPPHEYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of Lsi03G020270 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 70/162 (43.21%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 10  GFGFHSKPNYIYPASDTVRRPESSVDSLFEFDEADIWTSAPTPPSESRKIFPISKKLPKR 69
           G  ++++P+Y +  +D      +S DS  EFDE+D++    +   +  +    S +  K+
Sbjct: 4   GKSYYARPSYRFLGTDQPSYFTAS-DSGLEFDESDLFNPIHSDSPDFCRKISSSVRSGKK 63

Query: 70  SGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDDDDDDIRRAPP 129
           S    +A  +  A+SSLPVN+PDWSKIL+ +   + RR + + D DD DD++D     PP
Sbjct: 64  SSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDND-DDDDDNEDGGDWLPP 123

Query: 130 HEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           HE+LA+ R  SFSVHEG+GRTLKGRDL  VRNAI++K GF+D
Sbjct: 124 HEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Lsi03G020270 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-25
Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 0


Query: 13  FHSKPNYIYPASDTVRRPESSVDSLFEFDEADIWTSAPTPPSESRKIFPISKKLPKRSGP 72
           ++ +P++ +  +D  R    + DS FEFDE+D++++    P   RK+   ++K    S P
Sbjct: 9   YYQRPSHRFLPTD--RTYNVTGDSEFEFDESDLYSNRSDSPEFRRKLITSNRK----SSP 68

Query: 73  ATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDDDDDDIRRAPPHEY 132
           AT     V  +SSLP+N+ +WSKIL     K  R+ +        +DDD    + PPHEY
Sbjct: 69  ATVTTTTV--ASSLPMNVQNWSKIL----GKENRKSI-------ENDDDGGEGKLPPHEY 128

Query: 133 LARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           LA+ R  SFSVHEGIGRTLKGRD+  VRNAI +KTGF D
Sbjct: 129 LAKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of Lsi03G020270 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 95.5 bits (236), Expect = 4.4e-20
Identity = 65/162 (40.12%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 13  FHSKPNYIYPASDTVRRPESSVDSLFEFDEADIW-TSAPTPPSESRKIFPISKKLPKRSG 72
           ++ +P++ +  +D       +  S FE DE D++ T + +  S S     I+      + 
Sbjct: 7   YYPRPSHRFFTTD----QHVTATSDFELDEWDLFNTGSDSSSSFSFSDLTITSGRTGTNR 66

Query: 73  PATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRREVAEEDFDDSDD--DDDDIRRAPP 132
                  + KA+SSLPVN+PDWSKIL ++  +  +R+++ E+  D D+    +  RR PP
Sbjct: 67  QIHGGSDSGKAASSLPVNVPDWSKILGDESRR--QRKISNEEEVDGDEILCGEGTRRVPP 126

Query: 133 HEYLARRRGDSFSVHEGIGRTLKGRDLRMVRNAIWKKTGFED 172
           HE LA RR  SFSVHEG GRTLKGRDL  VRN I+K  G ED
Sbjct: 127 HELLANRRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of Lsi03G020270 vs. TAIR 10
Match: AT1G61930.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 85.1 bits (209), Expect = 5.9e-17
Identity = 55/130 (42.31%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 48  SAPTPPSESRKIFPISKKLPKRSGPATAAEKAVKASSSLPVNIPDWSKILQNDQNKHGRR 107
           S   PPS S  I    +K+    G     E   K +SS PVN+PDWSKI + D  +    
Sbjct: 83  SLVAPPSSSPMIV---QKI--HGGGGEGEEDRRKLASSAPVNVPDWSKIYRVDSVE---- 142

Query: 108 EVAEEDFDDSDDDDDDIRRAPPHEYLARRR--------GDSFSVHEGIGRTLKGRDLRMV 167
             +  + DD DD+D++    PPHEYLA+ +        G   SV +G+GRTLKGR+LR V
Sbjct: 143 --SIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRV 201

Query: 168 RNAIWKKTGF 170
           R+AIW +TGF
Sbjct: 203 RDAIWSQTGF 201

The following BLAST results are available for this feature:

BLAST of Lsi03G020270 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G020270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TR07	2.3e-77	87.64	Senescence regulator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352...	[more]
A0A1S3B5S2	2.3e-77	87.64	uncharacterized protein LOC103486480 OS=Cucumis melo OX=3656 GN=LOC103486480 PE=...	[more]
A0A0A0LDH0	6.7e-77	88.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G739050 PE=4 SV=1	[more]
A0A6J1L0M7	3.3e-76	86.13	uncharacterized protein LOC111498772 OS=Cucurbita maxima OX=3661 GN=LOC111498772...	[more]
A0A6J1FKK7	2.2e-75	85.55	uncharacterized protein LOC111446095 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]

BLAST of Lsi03G020270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905106.1	2.7e-88	95.91	uncharacterized protein LOC120091239 [Benincasa hispida]	[more]
XP_008442681.1	4.8e-77	87.64	PREDICTED: uncharacterized protein LOC103486480 [Cucumis melo] >KAA0044011.1 Sen...	[more]
KAG7028018.1	1.1e-76	86.71	hypothetical protein SDJN02_09198, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_004137823.1	1.4e-76	88.27	uncharacterized protein LOC101217342 [Cucumis sativus] >KGN58959.1 hypothetical ...	[more]
XP_023005909.1	6.9e-76	86.13	uncharacterized protein LOC111498772 [Cucurbita maxima]	[more]

BLAST of Lsi03G020270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03230.1	2.6e-33	47.90	Protein of unknown function, DUF584	[more]
AT5G60680.1	3.3e-28	43.21	Protein of unknown function, DUF584	[more]
AT3G45210.1	5.9e-25	43.40	Protein of unknown function, DUF584	[more]
AT2G28400.1	4.4e-20	40.12	Protein of unknown function, DUF584	[more]
AT1G61930.1	5.9e-17	42.31	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 48..171 e-value: 1.6E-36 score: 126.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..147
None	No IPR available	PANTHER	PTHR46525	EMB\|CAB72159.1	coord: 1..171
None	No IPR available	PANTHER	PTHR46525:SF6	ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MOK16	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G020270.1	Lsi03G020270.1	mRNA