Lsi03G020120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G020120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Transcription initiation factor TFIID subunit 8
Location	chr03: 31528620 .. 31529711 (+)
RNA-Seq Expression	Lsi03G020120
Synteny	Lsi03G020120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGATGGAGTTGGAAATAACATGAAGTCGAAAGAGCAACAAAGCTCTGATTCAAGGAAATGCAGAGGCAACGAGTTTGGTCGAGAGTTGTCCAAAATTGCTGTGGCGCAAATGTGTAATAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCGTTAAATACCTTCGCCATCTGGGGAAGATTGCAACATTTTATGCCAATTTAGCTGGTAGAATTGAGTGCAATGTGTTTGATATAATCAGAGGGCTTGAAGAGTTGGAATCATCACAAGGGTTTATGGGTGCTTGGGAATCAGATAACTGTCTTGCCAATTCGGGGTCAGTGAAGAACATTGTTTACTATGTGAATTCAGTTGAAGAGATCCCTTTTGCTCATCCGCTGCCACGTTTCCCTGTGATCAGAAAGAGGGAGTCAATTCCAAGCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAATTGGTTGCCAGCATTCCCTGATTCTCACACGTATAGTCATTCAGCTTTATGGAGGAGGAAGCCAAGAGAGCCGCGTGCTGAGAAGATAGAGCTTGCGAGGCAACAACGGAAGGCGGAGAAATCATTGTTGGGTTTGCAGCAGAGATTGGTTTCCTGTGGTGAGATTGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACATGTTTGCAAGAGATGGAAGATGGGATTGGATTGCCTTCAAAAAACACAATTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTTGCTCCTGCCATTGAGGCGATTAAAGGTGGTGGCTTTCCTAATAGTCAGGATGACAAGGCAAAGATTCTTCCTCGTGGGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATGTATGAATTCGAATGCTAAAATGGCAGGAATTAGGGAATCTGTGTTCTGGGTCAGACGAGATGATGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATTCATCCTCAGACAGTCTATAGACAAGCCAGAAGAGCTCAACCAATCATAA

mRNA sequence

ATGAGGGATGGAGTTGGAAATAACATGAAGTCGAAAGAGCAACAAAGCTCTGATTCAAGGAAATGCAGAGGCAACGAGTTTGGTCGAGAGTTGTCCAAAATTGCTGTGGCGCAAATGTGTAATAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCGTTAAATACCTTCGCCATCTGGGGAAGATTGCAACATTTTATGCCAATTTAGCTGGTAGAATTGAGTGCAATGTGTTTGATATAATCAGAGGGCTTGAAGAGTTGGAATCATCACAAGGGTTTATGGGTGCTTGGGAATCAGATAACTGTCTTGCCAATTCGGGGTCAGTGAAGAACATTGTTTACTATGTGAATTCAGTTGAAGAGATCCCTTTTGCTCATCCGCTGCCACGTTTCCCTGTGATCAGAAAGAGGGAGTCAATTCCAAGCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAATTGGTTGCCAGCATTCCCTGATTCTCACACGTATAGTCATTCAGCTTTATGGAGGAGGAAGCCAAGAGAGCCGCGTGCTGAGAAGATAGAGCTTGCGAGGCAACAACGGAAGGCGGAGAAATCATTGTTGGGTTTGCAGCAGAGATTGGTTTCCTGTGGTGAGATTGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACATGTTTGCAAGAGATGGAAGATGGGATTGGATTGCCTTCAAAAAACACAATTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTTGCTCCTGCCATTGAGGCGATTAAAGGTGGTGGCTTTCCTAATAGTCAGGATGACAAGGCAAAGATTCTTCCTCGTGGGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATGTATGAATTCGAATGCTAAAATGGCAGGAATTAGGGAATCTGTGTTCTGGGTCAGACGAGATGATGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATTCATCCTCAGACAGTCTATAGACAAGCCAGAAGAGCTCAACCAATCATAA

Coding sequence (CDS)

ATGAGGGATGGAGTTGGAAATAACATGAAGTCGAAAGAGCAACAAAGCTCTGATTCAAGGAAATGCAGAGGCAACGAGTTTGGTCGAGAGTTGTCCAAAATTGCTGTGGCGCAAATGTGTAATAGCGCAGGGTTTCAGAGCTTTAAGGAGTCTGCTCTAGACACACTGGCTGACATTGCCGTTAAATACCTTCGCCATCTGGGGAAGATTGCAACATTTTATGCCAATTTAGCTGGTAGAATTGAGTGCAATGTGTTTGATATAATCAGAGGGCTTGAAGAGTTGGAATCATCACAAGGGTTTATGGGTGCTTGGGAATCAGATAACTGTCTTGCCAATTCGGGGTCAGTGAAGAACATTGTTTACTATGTGAATTCAGTTGAAGAGATCCCTTTTGCTCATCCGCTGCCACGTTTCCCTGTGATCAGAAAGAGGGAGTCAATTCCAAGCTTTGTTCAGATTGGTGAAACCCCACCTAGCAAACATATTCCCAATTGGTTGCCAGCATTCCCTGATTCTCACACGTATAGTCATTCAGCTTTATGGAGGAGGAAGCCAAGAGAGCCGCGTGCTGAGAAGATAGAGCTTGCGAGGCAACAACGGAAGGCGGAGAAATCATTGTTGGGTTTGCAGCAGAGATTGGTTTCCTGTGGTGAGATTGAGTTTTCAGGAGGTGAAAGTAATTCATTACTTGGGACATGTTTGCAAGAGATGGAAGATGGGATTGGATTGCCTTCAAAAAACACAATTGGCAAGGATGGGATAAGCCATTTGTCTGTGCCAGAGGTGTTTGCTCCTGCCATTGAGGCGATTAAAGGTGGTGGCTTTCCTAATAGTCAGGATGACAAGGCAAAGATTCTTCCTCGTGGGAGGCCTCTTGTTCATTTCAAGTTAGAAACTTGCAAAACATTTCTTGGAGGATGTATGAATTCGAATGCTAAAATGGCAGGAATTAGGGAATCTGTGTTCTGGGTCAGACGAGATGATGAAAGAGATCAAAAGCATAATAACGAAAGAGATGAAAAGAAGAGGAGAGTTGAATTCATCCTCAGACAGTCTATAGACAAGCCAGAAGAGCTCAACCAATCATAA

Protein sequence

MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSALWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSCGEIEFSGGESNSLLGTCLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPLVHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQSIDKPEELNQS

Homology

[Close]

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.1e-65
Identity = 152/369 (41.19%), Postives = 219/369 (59.35%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVK 66
           N  +++E   +D+    G     EF    +K AVAQ+C S G+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNIVY 126
           Y+  LGK AT +ANL GR +CNVFDII  L++L  + G  G       L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVEEIPFAHPLPRFPVI---RKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHS 186
           +VNS EE+PF+ PLP FPV    R R+ IPSFV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSCGEIEFSGGESNSLLGTCLQEME 246
            +W  +  +PR +KIE ARQ+RKAE++LL LQ++LV   +I         + G   +  +
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVC--KISSRNPVWGDMDGVKEEMRD 241

Query: 247 DGIGLPSKN------TIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 306
           D   L S +      ++ +DG   LSV E FAPA+EA +  GF +    + K   + +P+
Sbjct: 242 DESELRSVSSGEKVESLNRDG---LSVIEAFAPAMEAAR-DGFSSEAHTEWK---KNKPV 301

Query: 307 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 363
              KL T K FLG  ++ + +M G    + +VR +D         RD+K+RR EFILRQ 
Sbjct: 302 ALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAEFILRQC 352

[Close]

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot
Match: Q5VWG9 (Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.1e-08
Identity = 40/150 (26.67%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 27  FGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVF 86
           + R L +++VAQ+C + G+ S + SA   L D+  +YL+ LG+    Y+ L GR +  + 
Sbjct: 5   YSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPILD 64

Query: 87  DIIRGLEELESSQGFMGAWESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRE 146
           D+    +        MG            S+  +  Y++++E + F H +P FPV   + 
Sbjct: 65  DVGEAFQ-------LMGV-----------SLHELEDYIHNIEPVTFPHQIPSFPV--SKN 124

Query: 147 SIPSFVQIGETPP---SKHIPNWLPAFPDS 174
           ++  F Q G        ++IP++LP    S
Sbjct: 125 NVLQFPQPGSKDAEERKEYIPDYLPPIVSS 134

[Close]

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot
Match: Q5F489 (Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.7e-08
Identity = 40/150 (26.67%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 27  FGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVF 86
           + R L +++VAQ+C + G+ S + SA D L D+  +YL+ LG+    Y  L GR +    
Sbjct: 5   YSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRYCELYGRTD---- 64

Query: 87  DIIRGLEELESSQGFMGAWESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRE 146
                L+++  +   MG            ++  +  Y++++E + FAH +P FPV   + 
Sbjct: 65  ---PILDDVGDAFKLMGV-----------NLHELEDYIHNIEPVTFAHQIPSFPV--SKN 124

Query: 147 SIPSFVQIGETPP---SKHIPNWLPAFPDS 174
           ++  F Q G        ++IP+++P    S
Sbjct: 125 NVLQFPQPGSKDAEERKEYIPDYMPPIVSS 134

[Close]

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.2e-07
Identity = 47/180 (26.11%), Postives = 81/180 (45.00%), Query Frame = 0


Query: 29  RELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +   AGF S +++A+++L ++   YL  +G+ A  Y     R +  + DI
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 89  IRGLEELESSQGFMGAWESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRESI 148
           +  L E+    GF           N  S+    Y   S   +  A P+   PV      +
Sbjct: 84  VVTLIEM----GF-----------NVDSLP--AYAKRSQRMVITAPPVTNNPV------V 143

Query: 149 PSFVQIGETPP-SKHIPNWLPAFPDSHTYSHSALWRRKPREPRAEKIELARQQRKAEKSL 208
           P  +  G+  P   HIP+  P FPD HTY  +  +R    + +  + + A Q+R  E++L
Sbjct: 144 PKALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 180

[Close]

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.7e-07
Identity = 43/180 (23.89%), Postives = 79/180 (43.89%), Query Frame = 0


Query: 29  RELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVFDI 88
           R   ++ V+ +   AGF+S ++++++TL ++   Y+  +G+ A  Y     R +  + DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  IRGLEELESSQGFMGAWESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRESI 148
           +  L E+  +   + A                 Y   S   +  A P+   PV       
Sbjct: 94  VVTLVEMGFNVDTLPA-----------------YAKRSQRMVITAPPVTNQPV------T 153

Query: 149 PSFVQIGET-PPSKHIPNWLPAFPDSHTYSHSALWRRKPREPRAEKIELARQQRKAEKSL 208
           P  +  G+  P   HIP+  P FPD HTY  +  +R    + +  + + A Q+R  E++L
Sbjct: 154 PKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

[Close]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL
Match: A0A1S3B6Z5 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103486494 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 324/370 (87.57%), Postives = 344/370 (92.97%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGRE+SKIAVAQMCNS GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL  LGKIATFYANLAGRIECNVFDIIRGLEELESSQGF+GAW+SD+CLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLP FPVIRKRESIP+FVQIGETPPSKHIP+WLPAFPD+HTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELARQ+RKAEKSLLGLQQRLVSC       GEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           C QE+EDG GLP +NT  KDGISHLSVPEVFAPAIE IKGGG PNSQD+KAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTF+GG MNSN+KM GIRESVFWVRR+DERDQKHNNERDEKKRRVE+IL+ S
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IDKPEELNQS 364
           I+KPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL
Match: A0A5D3DNP1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002670 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 324/370 (87.57%), Postives = 344/370 (92.97%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGRE+SKIAVAQMCNS GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL  LGKIATFYANLAGRIECNVFDIIRGLEELESSQGF+GAW+SD+CLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLP FPVIRKRESIP+FVQIGETPPSKHIP+WLPAFPD+HTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELARQ+RKAEKSLLGLQQRLVSC       GEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           C QE+EDG GLP +NT  KDGISHLSVPEVFAPAIE IKGGG PNSQD+KAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTF+GG MNSN+KM GIRESVFWVRR+DERDQKHNNERDEKKRRVE+IL+ S
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IDKPEELNQS 364
           I+KPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL
Match: A0A0A0LDI8 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_3G740170 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 3.3e-182
Identity = 325/370 (87.84%), Postives = 345/370 (93.24%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +E+SKIAVAQMCNS GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLGKIATFYANLAGRIECNVFDIIRGLEELE SQGF+GAW+SD+CLANSGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLP F VIRKRESIP+FVQIGETPPSKHIP+WLPAFPD+HTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+Q+RKAEKSLLGLQQRLVSC       GEIEFSGGESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           C QE+EDGIGLP +NT GKDGISHLSVPEVFAPAIEAIKGGG PNSQD+KAKILPR RPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTFLGG MN +AKM GIRESVFWVRRDDERD+KH NERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           I+KPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL
Match: A0A6J1J4F9 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111481673 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.1e-173
Identity = 306/370 (82.70%), Postives = 334/370 (90.27%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+FGRE+S+IAV QMCN AGFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAWE ++CL NSGSVK I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKKI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSVEEIPFAHPLPRFPVIR RE IPSFVQIGE PPSKHIP+WLPAFPD+HTY+HSA
Sbjct: 121 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKPREPRAEKIELARQ+RKAEKSLLGLQQRLVSC       G++EFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLGS 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           CLQEMEDGIG PS+N+IGKDGISHLSVPEVFAPA+EAIKG GFPNS+DD+A ILPR RPL
Sbjct: 241 CLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLET +TFLGG MN NA++ GIRESVFWVRRDDER+QKHN ERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDERNQKHNKERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           IDKPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL
Match: A0A6J1F3H6 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111441840 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 3.1e-172
Identity = 304/370 (82.16%), Postives = 332/370 (89.73%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+ GRE+S+IAV QMCN AGFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDLGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAWE ++CL NSGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLPRFPVIR RE IPSFVQIGE PPSKHIP+WLPAFPD+HTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKPREPRAEKIELARQ+RKAEKSLLGLQ+RLVSC       G+IEFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           CLQEMEDG+G PS+ +IGKDGISHLSVPEVFAPAIE IKG GFPNS+DD+A ILPR RPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEVIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLET +TFLGG MN NAK+ GIRESVFWVRRDDERDQKHN ERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           IDKPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. NCBI nr
Match: XP_008442699.1 (PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899603.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >XP_016899604.1 PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >KAA0043998.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] >TYK25142.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 648.7 bits (1672), Expect = 3.1e-182
Identity = 324/370 (87.57%), Postives = 344/370 (92.97%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEFGRE+SKIAVAQMCNS GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGREVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL  LGKIATFYANLAGRIECNVFDIIRGLEELESSQGF+GAW+SD+CLA SGSVKNI
Sbjct: 61  IKYLHQLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWQSDHCLAKSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLP FPVIRKRESIP+FVQIGETPPSKHIP+WLPAFPD+HTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFPVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELARQ+RKAEKSLLGLQQRLVSC       GEIEFSG ESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELARQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGDESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           C QE+EDG GLP +NT  KDGISHLSVPEVFAPAIE IKGGG PNSQD+KAKILPR RPL
Sbjct: 241 CFQEIEDGFGLPYENTSPKDGISHLSVPEVFAPAIEVIKGGGCPNSQDEKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTF+GG MNSN+KM GIRESVFWVRR+DERDQKHNNERDEKKRRVE+IL+ S
Sbjct: 301 VHFKLETCKTFIGGSMNSNSKMGGIRESVFWVRRNDERDQKHNNERDEKKRRVEYILKHS 360

Query: 361 IDKPEELNQS 364
           I+KPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. NCBI nr
Match: XP_031738252.1 (transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738254.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738255.1 transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN58974.1 hypothetical protein Csa_002614 [Cucumis sativus])

HSP 1 Score: 647.5 bits (1669), Expect = 6.8e-182
Identity = 325/370 (87.84%), Postives = 345/370 (93.24%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSDSRKCRGNEF +E+SKIAVAQMCNS GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLGKIATFYANLAGRIECNVFDIIRGLEELE SQGF+GAW+SD+CLANSGSVKNI
Sbjct: 61  IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLP F VIRKRESIP+FVQIGETPPSKHIP+WLPAFPD+HTYSHSA
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKP+E RAEKIELA+Q+RKAEKSLLGLQQRLVSC       GEIEFSGGESNSLLGT
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCGSERSGNGEIEFSGGESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           C QE+EDGIGLP +NT GKDGISHLSVPEVFAPAIEAIKGGG PNSQD+KAKILPR RPL
Sbjct: 241 CFQEIEDGIGLPYENTSGKDGISHLSVPEVFAPAIEAIKGGGCPNSQDEKAKILPRVRPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTFLGG MN +AKM GIRESVFWVRRDDERD+KH NERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETCKTFLGGSMNLSAKMRGIRESVFWVRRDDERDRKHKNERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           I+KPEELNQS
Sbjct: 361 IEKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. NCBI nr
Match: XP_038904421.1 (transcription initiation factor TFIID subunit 8-like [Benincasa hispida])

HSP 1 Score: 644.0 bits (1660), Expect = 7.5e-181
Identity = 324/370 (87.57%), Postives = 339/370 (91.62%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDGVGNNMKSKEQQSSD RKCRGNEFGRELSKIAVAQMCN  GFQSFKESALDTLADIA
Sbjct: 1   MRDGVGNNMKSKEQQSSDLRKCRGNEFGRELSKIAVAQMCNRVGFQSFKESALDTLADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGF+GAWESD+CLANSGSVKNI
Sbjct: 61  IKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFLGAWESDHCLANSGSVKNI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSVEEIPFAHPLPRFPVIR R SIPSFVQIGETPPS+HIPNWLPAFPD+HTY+HSA
Sbjct: 121 VCYVNSVEEIPFAHPLPRFPVIRNRGSIPSFVQIGETPPSRHIPNWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWR+KP EP AEKIELARQ+RKA KSLLGLQQRL+SC       G+I FSG ESNSLLGT
Sbjct: 181 LWRKKPGEPHAEKIELARQRRKAGKSLLGLQQRLISCGSERSRNGQIGFSGDESNSLLGT 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           CLQEMEDGIGL S N IGKDGI HLSVPEVFAPAIEAIKGG FPNSQDDKAKILPR RPL
Sbjct: 241 CLQEMEDGIGLHSDNIIGKDGICHLSVPEVFAPAIEAIKGGCFPNSQDDKAKILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLETCKTFLGG MN NAKMAG+RESVFW RRD+ERDQK + ERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETCKTFLGGSMNLNAKMAGVRESVFWFRRDNERDQKRDGERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           ID PEELN+S
Sbjct: 361 IDNPEELNKS 370

[Close]

BLAST of Lsi03G020120 vs. NCBI nr
Match: XP_022983000.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita maxima])

HSP 1 Score: 618.2 bits (1593), Expect = 4.4e-173
Identity = 306/370 (82.70%), Postives = 334/370 (90.27%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+FGRE+S+IAV QMCN AGFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAWE ++CL NSGSVK I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKKI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSVEEIPFAHPLPRFPVIR RE IPSFVQIGE PPSKHIP+WLPAFPD+HTY+HSA
Sbjct: 121 VRYVNSVEEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKPREPRAEKIELARQ+RKAEKSLLGLQQRLVSC       G++EFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQQRLVSCGLERSGNGKVEFSGGESNSFLGS 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           CLQEMEDGIG PS+N+IGKDGISHLSVPEVFAPA+EAIKG GFPNS+DD+A ILPR RPL
Sbjct: 241 CLQEMEDGIGFPSENSIGKDGISHLSVPEVFAPALEAIKGSGFPNSRDDEANILPRVRPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLET +TFLGG MN NA++ GIRESVFWVRRDDER+QKHN ERDEKKRRVE+ILR S
Sbjct: 301 VHFKLETSRTFLGGSMNLNAEVTGIRESVFWVRRDDERNQKHNKERDEKKRRVEYILRHS 360

Query: 361 IDKPEELNQS 364
           IDKPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. NCBI nr
Match: KAG6580615.1 (Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 617.1 bits (1590), Expect = 9.8e-173
Identity = 305/370 (82.43%), Postives = 334/370 (90.27%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIA 60
           MRDG G++MKSKEQQ S+ RKCRGN+FGRE+S+IAV QMCN AGFQSFKESA D LADIA
Sbjct: 1   MRDGGGSSMKSKEQQRSELRKCRGNDFGREVSRIAVTQMCNIAGFQSFKESATDALADIA 60

Query: 61  VKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNI 120
           +KYL HLG+IA FYANLAGR ECNVFDIIRG+EELESSQGF GAWE ++CL NSGSVK+I
Sbjct: 61  IKYLCHLGRIAAFYANLAGRTECNVFDIIRGIEELESSQGFQGAWEPNHCLTNSGSVKSI 120

Query: 121 VYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHSA 180
           V YVNSV+EIPFAHPLPRFPVIR RE IPSFVQIGE PPSKHIP+WLPAFPD+HTY+HSA
Sbjct: 121 VRYVNSVDEIPFAHPLPRFPVIRNREPIPSFVQIGEAPPSKHIPSWLPAFPDAHTYNHSA 180

Query: 181 LWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSC-------GEIEFSGGESNSLLGT 240
           LWRRKPREPRAEKIELARQ+RKAEKSLLGLQ+RLVSC       G+IEFSGGESNS LG+
Sbjct: 181 LWRRKPREPRAEKIELARQRRKAEKSLLGLQKRLVSCGSERSGNGKIEFSGGESNSFLGS 240

Query: 241 CLQEMEDGIGLPSKNTIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 300
           CLQEMEDG+G PS+ +IGKDGISHLSVPEVFAPAIEAIKG GFPNS+DD+A ILPR RPL
Sbjct: 241 CLQEMEDGVGFPSETSIGKDGISHLSVPEVFAPAIEAIKGRGFPNSRDDEANILPRARPL 300

Query: 301 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 360
           VHFKLET +TFLGG MN NAK+ GIRESVFWVRRDDERDQKHN ERDEKKRRV++ILR S
Sbjct: 301 VHFKLETSRTFLGGSMNLNAKVTGIRESVFWVRRDDERDQKHNKERDEKKRRVDYILRHS 360

Query: 361 IDKPEELNQS 364
           IDKPEELNQS
Sbjct: 361 IDKPEELNQS 370

[Close]

BLAST of Lsi03G020120 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 250.0 bits (637), Expect = 2.9e-66
Identity = 152/369 (41.19%), Postives = 219/369 (59.35%), Query Frame = 0


Query: 7   NNMKSKEQQSSDSRKCRG----NEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVK 66
           N  +++E   +D+    G     EF    +K AVAQ+C S G+++FK+ AL++L+  A++
Sbjct: 2   NTERAQEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQ 61

Query: 67  YLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWESDNCLANSGSVKNIVY 126
           Y+  LGK AT +ANL GR +CNVFDII  L++L  + G  G       L  S  ++ I+ 
Sbjct: 62  YILQLGKTATSFANLTGRSQCNVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIID 121

Query: 127 YVNSVEEIPFAHPLPRFPVI---RKRESIPSFVQIGETPPSKHIPNWLPAFPDSHTYSHS 186
           +VNS EE+PF+ PLP FPV    R R+ IPSFV+IGETPP KHIP WLPAFPD HTY  +
Sbjct: 122 FVNSSEEVPFSQPLPSFPVAISDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKET 181

Query: 187 ALWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSCGEIEFSGGESNSLLGTCLQEME 246
            +W  +  +PR +KIE ARQ+RKAE++LL LQ++LV   +I         + G   +  +
Sbjct: 182 PMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVC--KISSRNPVWGDMDGVKEEMRD 241

Query: 247 DGIGLPSKN------TIGKDGISHLSVPEVFAPAIEAIKGGGFPNSQDDKAKILPRGRPL 306
           D   L S +      ++ +DG   LSV E FAPA+EA +  GF +    + K   + +P+
Sbjct: 242 DESELRSVSSGEKVESLNRDG---LSVIEAFAPAMEAAR-DGFSSEAHTEWK---KNKPV 301

Query: 307 VHFKLETCKTFLGGCMNSNAKMAGIRESVFWVRRDDERDQKHNNERDEKKRRVEFILRQS 363
              KL T K FLG  ++ + +M G    + +VR +D         RD+K+RR EFILRQ 
Sbjct: 302 ALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREED---------RDDKRRRAEFILRQC 352

[Close]

BLAST of Lsi03G020120 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-41
Identity = 93/235 (39.57%), Postives = 134/235 (57.02%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNS--------------AGFQ 60
           M +GVG     + +     +  RGN+F   ++++AVAQ+C S                F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  SFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAWE 120
           SF+ESALDTL D+AV+Y++ +GK A  YANLAGR++ N  DI++ LE+L S  GF G  +
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 SDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPNW 180
           +D+CLA+SG VK+I+ Y    EEIPF + LPRFP  ++++  PSF ++G  PP +HIP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPAFPDSHTYSHSALWRRKPREPRAEKIELARQQRKAEKSLLGLQQRLVSCGEIE 222
           LPAFP++     S        E  A  IE     ++   SL  +Q      G +E
Sbjct: 197 LPAFPETELCDRS-------EETNAATIEGEIPSKENGSSLPSMQLSFDGGGRLE 244

[Close]

BLAST of Lsi03G020120 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 165.6 bits (418), Expect = 7.3e-41
Identity = 91/227 (40.09%), Postives = 129/227 (56.83%), Query Frame = 0


Query: 1   MRDGVGNNMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSA---------------GF 60
           M +G G     + +        RGN+F   L+++A AQ+C S                 F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QSFKESALDTLADIAVKYLRHLGKIATFYANLAGRIECNVFDIIRGLEELESSQGFMGAW 120
            SF+E+AL+TL D+ ++Y++++GK A FY N+AGR+E N  DI++ LE+L S  GF GA 
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 ESDNCLANSGSVKNIVYYVNSVEEIPFAHPLPRFPVIRKRESIPSFVQIGETPPSKHIPN 180
           + ++CLA+SG VK+I+ Y    EEIPF + LPRFP  R +   PSF  IG  PP +HIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPAFPDSHTYSHSALWRRKPREPRAEKIELARQQRKAEKSLLGLQQ 213
           WLPAFP++   + S        E   +KIE   Q R    SL+ +QQ
Sbjct: 181 WLPAFPETKMSNGS-------EEINVDKIERDVQSRDNGSSLMSVQQ 220

[Close]

BLAST of Lsi03G020120 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-22
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 8   NMKSKEQQSSDSRKCRGNEFGRELSKIAVAQMCNSAGFQSFKESALDTLADIAVKYLRHL 67
           N K K +++SD       EF   L+KIAV+Q+C S G+++   SAL+TL     K+L+ L
Sbjct: 7   NSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSL 66

Query: 68  GKIATFYANLAGRIECNVFDIIRGLEE--LESSQGFMGAWE----SDNCLANSGSVKNIV 127
            ++A+ ++N A R E N+FDI+ GL++  L +S  F G          CL  S  ++N+ 
Sbjct: 67  AELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLS 126

Query: 128 YYVNSVEEIPFAHPLPRFPVIRKRESIPSF------VQIGETPPSKHIPNWLPAFPDS 174
            +V    EIPFA PLPR      RE   SF      V +  +     +P WLP FPDS
Sbjct: 127 DFVTYAPEIPFAKPLPR------RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPDS 178

The following BLAST results are available for this feature:

BLAST of Lsi03G020120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	4.1e-65	41.19	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5VWG9	2.1e-08	26.67	Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 ...	[more]
Q5F489	2.7e-08	26.67	Transcription initiation factor TFIID subunit 3 OS=Gallus gallus OX=9031 GN=TAF3...	[more]
Q7ZYA2	5.2e-07	26.11	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]
A7MAZ4	6.7e-07	23.89	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]

BLAST of Lsi03G020120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6Z5	1.5e-182	87.57	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DNP1	1.5e-182	87.57	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LDI8	3.3e-182	87.84	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A6J1J4F9	2.1e-173	82.70	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F3H6	3.1e-172	82.16	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lsi03G020120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442699.1	3.1e-182	87.57	PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo] >...	[more]
XP_031738252.1	6.8e-182	87.84	transcription initiation factor TFIID subunit 8 [Cucumis sativus] >XP_031738253....	[more]
XP_038904421.1	7.5e-181	87.57	transcription initiation factor TFIID subunit 8-like [Benincasa hispida]	[more]
XP_022983000.1	4.4e-173	82.70	transcription initiation factor TFIID subunit 8-like [Cucurbita maxima]	[more]
KAG6580615.1	9.8e-173	82.43	Transcription initiation factor TFIID subunit 8, partial [Cucurbita argyrosperma...	[more]

BLAST of Lsi03G020120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	2.9e-66	41.19	TBP-associated factor 8	[more]
AT3G02160.1	1.1e-41	39.57	Bromodomain transcription factor	[more]
AT5G15570.1	7.3e-41	40.09	Bromodomain transcription factor	[more]
AT1G31240.1	3.4e-22	37.08	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 25..101 e-value: 6.9E-28 score: 108.6
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 26..95 e-value: 2.1E-21 score: 75.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..105 e-value: 1.3E-19 score: 71.6
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 162..210 e-value: 7.4E-15 score: 55.3
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 162..214 e-value: 1.30127E-17 score: 73.8463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..362
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G020120.1	Lsi03G020120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity