Lsi03G019610 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G019610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	pistil-specific extensin-like protein
Location	chr03: 31026073 .. 31026903 (+)
RNA-Seq Expression	Lsi03G019610
Synteny	Lsi03G019610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAATGATGAATCAATAGGGAACAGAAGCGGCAACCACCGTCGCTTTGACTAATCAAATAAACCACCAATGGAGCTTGGCTTGACGCTCCAATGGTGGAACGCACGTCGCCATGTAGTGCCTCTCCACTTCCTTCTTCCTTCTTCCTTCTCGTTCTGTATATGAACCTCCGCAACCCTTCCCGATCCACACACAGCGGCTTTTACAGACACAAAAAAGCTCAAGATGGGACCTCTATTGCGGCTTACAACGGCGGCTTCAGTTCTAATCGCCTGCATCAACATCGTAGCAGCGGCGAGTGTAGCCGGCAACGCCATTCATATCGGCGGCAAAGTTCTCTGCCAGGACTGTACTCAAGGCTGGAACGAGTGGATCAACGGGAAGCCTCTTAAAGGTATAAATACAGAATTATTAGCGAGCTAAGTACTTCAAAATTGAAATCGCTTTTTCTAATGATGTTAATCAACGCTCTCGATTTCAGATTGCAAGGTTTCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCACTACGCGAGCGATTTGACGGACGAATTAGGGAAATTTGATATCACAATCGATAAGTTTATTCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCCGAGTTGCAACATCATGACCGATTTCGCCGGCGGACGCTCCGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTCGTCAAGTACGTTCTCGGACCATTTTACTTCACTTCACCTATGTGCGAGGAACCTGATACAGATGGGTCCGATGATAACGACGGAAAAAATTACTGA

mRNA sequence

ATGTTGAATGATGAATCAATAGGGAACAGAAGCGGCAACCACCGTCGCTTTGACTAATCAAATAAACCACCAATGGAGCTTGGCTTGACGCTCCAATGGTGGAACGCACGTCGCCATGTAGTGCCTCTCCACTTCCTTCTTCCTTCTTCCTTCTCGTTCTGTATATGAACCTCCGCAACCCTTCCCGATCCACACACAGCGGCTTTTACAGACACAAAAAAGCTCAAGATGGGACCTCTATTGCGGCTTACAACGGCGGCTTCAGTTCTAATCGCCTGCATCAACATCGTAGCAGCGGCGAGTGTAGCCGGCAACGCCATTCATATCGGCGGCAAAGTTCTCTGCCAGGACTGTACTCAAGGCTGGAACGAGTGGATCAACGGGAAGCCTCTTAAAGATTGCAAGGTTTCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCACTACGCGAGCGATTTGACGGACGAATTAGGGAAATTTGATATCACAATCGATAAGTTTATTCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCCGAGTTGCAACATCATGACCGATTTCGCCGGCGGACGCTCCGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTCGTCAAGTACGTTCTCGGACCATTTTACTTCACTTCACCTATGTGCGAGGAACCTGATACAGATGGGTCCGATGATAACGACGGAAAAAATTACTGA

Coding sequence (CDS)

ATGGGACCTCTATTGCGGCTTACAACGGCGGCTTCAGTTCTAATCGCCTGCATCAACATCGTAGCAGCGGCGAGTGTAGCCGGCAACGCCATTCATATCGGCGGCAAAGTTCTCTGCCAGGACTGTACTCAAGGCTGGAACGAGTGGATCAACGGGAAGCCTCTTAAAGATTGCAAGGTTTCTGTAACGTGTTTGGATGAGAGAAGCAGAGTGATGCACTACGCGAGCGATTTGACGGACGAATTAGGGAAATTTGATATCACAATCGATAAGTTTATTCACGGCAAGAAATTGAATCCGAAGAAATGCTCGGTGCGGCTTGTTTCGTCTCCGGATCCGAGTTGCAACATCATGACCGATTTCGCCGGCGGACGCTCCGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTCGTCAAGTACGTTCTCGGACCATTTTACTTCACTTCACCTATGTGCGAGGAACCTGATACAGATGGGTCCGATGATAACGACGGAAAAAATTACTGA

Protein sequence

MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTDFAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY

Homology

[Close]

BLAST of Lsi03G019610 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.6e-06
Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 33  IGGKVLCQDC-TQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGKFDITIDK 92
           + G V C+ C + G    +N   L+   V + C  +++ V  +A+  TD  G+F I    
Sbjct: 291 VSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKTMV-QWAT--TDNKGEFRIMPKS 350

Query: 93  FIHGKKLNPKKCSVRLVSSPDPSCNIMTDFAGGRSGVQLR 132
                  +  KC V LV SP+P+CN+ T+F GG+SG  L+
Sbjct: 351 L---TTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLK 384

[Close]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL
Match: A0A6J1CSG0 (pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC111014344 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.8e-85
Identity = 155/171 (90.64%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           M PLLRL  AASVLIAC NIVAAA  AG  IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MAPLLRLIMAASVLIACTNIVAAADDAG-VIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITIDK +HGKKLNPKKCSVRLVSSPDP+CNIMTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITIDKLVHGKKLNPKKCSVRLVSSPDPTCNIMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY 172
           FAGGRSGVQLRGPSL YRDFVKYVLGPFYFTSPMCEEP+TD SDDN+GKNY
Sbjct: 121 FAGGRSGVQLRGPSLTYRDFVKYVLGPFYFTSPMCEEPNTDDSDDNNGKNY 170

[Close]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL
Match: A0A0A0LAP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.8e-83
Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AAS+LI CINIVA    AG+ IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASLLIGCINIVA----AGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITI+KFI+GKKLNPKKCSVRLVSSPD +CN+MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGK 170
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDT GSDDNDGK
Sbjct: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 165

[Close]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL
Match: A0A1S3B787 (pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AAS+LI CINIVA     G+ IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASLLIGCINIVA----GGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITI+KFI+GKKLNPKKCSVRLVSSPD +CN+MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGK 170
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDT GSDDNDGK
Sbjct: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 165

[Close]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL
Match: A0A6J1J4V1 (pistil-specific extensin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481763 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 148/172 (86.05%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AASVLI CINIVAA +   + IHI GKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASVLIGCINIVAATN-EYDIIHIAGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRV+HY SDLTDELG+FDI ++K +HGK LNPKKCSVRLVSSPDPSCN MTD
Sbjct: 61  SVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDND-GKNY 172
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDTDGSDDN  G NY
Sbjct: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGVGSNY 171

[Close]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL
Match: A0A6J1F3T9 (uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC111442130 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 148/172 (86.05%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AASVLI CINIVAA +   + IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 24  MGPLLRLTMAASVLIGCINIVAATN-EYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 83

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRV+HY SDLTDELG+FDI ++K +HGK LNPKKCSVRLVSSPDPSCN MTD
Sbjct: 84  SVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTD 143

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDN-DGKNY 172
           FAGGRSGVQLRGPSLVYRD VKYVL PFYFTSPMCEEPDTDGSDDN  G NY
Sbjct: 144 FAGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 194

[Close]

BLAST of Lsi03G019610 vs. NCBI nr
Match: XP_038905672.1 (pistil-specific extensin-like protein [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 7.8e-88
Identity = 157/171 (91.81%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AASVLI CINI+AAA+ A + IHIGGKVLCQDCTQGWNEW NGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASVLIGCINIIAAANEANDVIHIGGKVLCQDCTQGWNEWNNGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDI I KFIHGKKLNPKKCSVRLVSSPDP+CNIMTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDIAIAKFIHGKKLNPKKCSVRLVSSPDPTCNIMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY 172
           FAGGRSG+QLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY
Sbjct: 121 FAGGRSGIQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY 171

[Close]

BLAST of Lsi03G019610 vs. NCBI nr
Match: XP_022144725.1 (pistil-specific extensin-like protein [Momordica charantia])

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 155/171 (90.64%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           M PLLRL  AASVLIAC NIVAAA  AG  IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MAPLLRLIMAASVLIACTNIVAAADDAG-VIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITIDK +HGKKLNPKKCSVRLVSSPDP+CNIMTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITIDKLVHGKKLNPKKCSVRLVSSPDPTCNIMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGKNY 172
           FAGGRSGVQLRGPSL YRDFVKYVLGPFYFTSPMCEEP+TD SDDN+GKNY
Sbjct: 121 FAGGRSGVQLRGPSLTYRDFVKYVLGPFYFTSPMCEEPNTDDSDDNNGKNY 170

[Close]

BLAST of Lsi03G019610 vs. NCBI nr
Match: XP_004137994.2 (pistil-specific extensin-like protein [Cucumis sativus] >KGN59025.1 hypothetical protein Csa_001709 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 9.9e-83
Identity = 152/169 (89.94%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AAS+LI CINIVA    AG+ IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASLLIGCINIVA----AGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITI+KFI+GKKLNPKKCSVRLVSSPD +CN+MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGK 170
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDT GSDDNDGK
Sbjct: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 165

[Close]

BLAST of Lsi03G019610 vs. NCBI nr
Match: XP_008442766.1 (PREDICTED: pistil-specific extensin-like protein [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AAS+LI CINIVA     G+ IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASLLIGCINIVA----GGDVIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRVMHYASDLTDELG+FDITI+KFI+GKKLNPKKCSVRLVSSPD +CN+MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDNDGK 170
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDT GSDDNDGK
Sbjct: 121 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDGK 165

[Close]

BLAST of Lsi03G019610 vs. NCBI nr
Match: XP_023528335.1 (uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80
Identity = 150/172 (87.21%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MGPLLRLTTAASVLIACINIVAAASVAGNAIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLT AASVLI CINIVAA +   + IHIGGKVLCQDCTQGWNEWINGKPLKDCKV
Sbjct: 49  MGPLLRLTMAASVLIGCINIVAATN-EYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 108

Query: 61  SVTCLDERSRVMHYASDLTDELGKFDITIDKFIHGKKLNPKKCSVRLVSSPDPSCNIMTD 120
           SVTCLDERSRV+HY SDLTDELG+FDI ++K +HGKKLNPKKCSVRLVSSPDPSCN MTD
Sbjct: 109 SVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKKLNPKKCSVRLVSSPDPSCNTMTD 168

Query: 121 FAGGRSGVQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDN-DGKNY 172
           FAGGRSGVQLRGPSLVYRD VKYVLGPFYFTSPMCEEPDTDGSDDN  G NY
Sbjct: 169 FAGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGGGSNY 219

[Close]

BLAST of Lsi03G019610 vs. TAIR 10
Match: AT3G09925.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 83/149 (55.70%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 14  LIACINIV--AAASVAGNAIHIGGKVLCQDCTQGWNEWING-KPLKDCKVSVTCLDERSR 73
           L++C+  +   AA   G+ IH+ GKV+CQDC+  ++EWING +P+K   VS+TC+DER R
Sbjct: 17  LVSCVTHITTTAAYNNGDKIHVAGKVMCQDCSLNYDEWINGSEPIKGAVVSITCMDERRR 76

Query: 74  VMHYASDLTDELGKFDITIDKFI-HGKKLNPKKCSVRLVSSPDPSCNIMTDFAGGRSGVQ 133
           V +Y SDLTDE G+FD+ ++K + HGK L P+ C+VRLVSSPD SCNI T+F  G++GV+
Sbjct: 77  VSYYGSDLTDERGQFDLMVNKVLSHGKVLKPQLCNVRLVSSPDLSCNIPTNFGNGQTGVK 136

Query: 134 LRGPSLVYRDFVKYVLGPFYFTSPMCEEP 159
           L  P  V+RD VKYV+GPFY+T+PMCE P
Sbjct: 137 LVRPFTVFRDLVKYVVGPFYYTTPMCETP 165

[Close]

BLAST of Lsi03G019610 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06
Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 0


Query: 35  GKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVMHYASDLTDELGKFDITIDKFI- 94
           G V C  C  G         +    V+V C+DE S+        TD+ G+F + +   + 
Sbjct: 44  GTVYCDTCFNGAFSKSPNHLISGALVAVECIDENSKPSFRQEVKTDKRGEFKVKLPFSVS 103

Query: 95  -HGKKLNPKKCSVRLVSSPDPSCNI 118
            H KK+  K+CSV+L+SS  P C+I
Sbjct: 104 KHVKKI--KRCSVKLLSSSQPYCSI 126

The following BLAST results are available for this feature:

BLAST of Lsi03G019610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03211	4.6e-06	33.00	Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Lsi03G019610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSG0	8.8e-85	90.64	pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A0A0LAP0	4.8e-83	89.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1	[more]
A0A1S3B787	1.4e-82	89.35	pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE...	[more]
A0A6J1J4V1	1.9e-79	86.05	pistil-specific extensin-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148176...	[more]
A0A6J1F3T9	3.2e-79	86.05	uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of Lsi03G019610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905672.1	7.8e-88	91.81	pistil-specific extensin-like protein [Benincasa hispida]	[more]
XP_022144725.1	1.8e-84	90.64	pistil-specific extensin-like protein [Momordica charantia]	[more]
XP_004137994.2	9.9e-83	89.94	pistil-specific extensin-like protein [Cucumis sativus] >KGN59025.1 hypothetical...	[more]
XP_008442766.1	2.9e-82	89.35	PREDICTED: pistil-specific extensin-like protein [Cucumis melo]	[more]
XP_023528335.1	2.1e-80	87.21	uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G019610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09925.1	3.0e-45	55.70	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G15780.1	6.1e-06	32.94	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 33..127 e-value: 7.7E-22 score: 77.5
None	No IPR available	PANTHER	PTHR33470:SF29	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 8..162
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 8..162
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..17 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G019610.1	Lsi03G019610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071944	cell periphery