Lsi03G019190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G019190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter domain-containing protein
Locationchr03: 30569491 .. 30569724 (+)
RNA-Seq ExpressionLsi03G019190
SyntenyLsi03G019190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTCGTGTCTACCATTTTCCAATGTTGTCTGCAAACATGAATTCTTCGTCTTCTTCGCTTCTTCTCCACAGATCATTGCAGCTTCCCATTATAATTGATGCCAAATGCTTCGTTACTGCATCTCTATATGTTCCTTTACCATTTGGATATTCCAATGCATTGATAGCAAATGATCGTCCTCTGCTTTTCGGCGACCGATTCAACTGGAACAGTAAGGTTTCTGGTGGCTGA

mRNA sequence

ATGCGTCGTGTCTACCATTTTCCAATGTTGTCTGCAAACATGAATTCTTCGTCTTCTTCGCTTCTTCTCCACAGATCATTGCAGCTTCCCATTATAATTGATGCCAAATGCTTCGTTACTGCATCTCTATATGTTCCTTTACCATTTGGATATTCCAATGCATTGATAGCAAATGATCGTCCTCTGCTTTTCGGCGACCGATTCAACTGGAACAGTAAGGTTTCTGGTGGCTGA

Coding sequence (CDS)

ATGCGTCGTGTCTACCATTTTCCAATGTTGTCTGCAAACATGAATTCTTCGTCTTCTTCGCTTCTTCTCCACAGATCATTGCAGCTTCCCATTATAATTGATGCCAAATGCTTCGTTACTGCATCTCTATATGTTCCTTTACCATTTGGATATTCCAATGCATTGATAGCAAATGATCGTCCTCTGCTTTTCGGCGACCGATTCAACTGGAACAGTAAGGTTTCTGGTGGCTGA

Protein sequence

MRRVYHFPMLSANMNSSSSSLLLHRSLQLPIIIDAKCFVTASLYVPLPFGYSNALIANDRPLLFGDRFNWNSKVSGG
Homology
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BLAST of Lsi03G019190 vs. ExPASy TrEMBL
Match: A0A0A0LGJ3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G752490 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 29/38 (76.32%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 1  MRRVYHFPMLSANMNSSSSSLLLHRSLQLPIIIDAKCF 39
          MRRVYHFP LS NMNSSSSSL LH   QLPII  +KCF
Sbjct: 1  MRRVYHFPFLSTNMNSSSSSLQLHSPSQLPIIFPSKCF 38

The following BLAST results are available for this feature:
BLAST of Lsi03G019190 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi03G019190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGJ31.1e-0576.32ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G75... [more]
BLAST of Lsi03G019190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Lsi03G019190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G019190.1Lsi03G019190.1mRNA