Lsi03G018870 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018870
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Location	chr03: 30285347 .. 30286210 (+)
RNA-Seq Expression	Lsi03G018870
Synteny	Lsi03G018870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCAAGTGGATCTGGAAACTCTGGTTTCTGCATGTGCCGGCGGCGGTGCTCACGACCGGAAAATCGCCTGCGAGGAAGCTTTTGACGACGGCGATCACCGGACGGAAGCTGAGAACAGAGAGGTAACAGAGCAGCCGGAGATTCCGCCTGATTTTCCACCGGAATCGTTTTGGCTCTCGAAGGATGCGGAGTTCGATTGGTTAGATCAGAACGCTTTTTACGAGAGGAAAGATTCGACCAAAGGAAGTTCGAATTCAACGAACTTGAATCCAAGTGTGAATCCGGCTTCTAATTCGAATTCTCAACGATTTTCCTTGAACTTCAAATCGAAGGCTTCGATTCTCGGCCTTCCGAAGCTTCACAAGACTTGTTTTGTAGATTCGAAGAGTCGTCGAAATGCGAAATCTGGAAACGCGAGGTTGTTCCCTAAACAATCGGGATCTTCCGAAAAATCGGACTCTGCGCTCGTCGAACCGTCGTCGCCGAAAGTTTCGTGTATGGGGAGAGTGAGATCGAAGCGAGATCGGAGTCGTAGATGGAAGAATCGTCGACGTTCATCCGAACCAGCGCCGCCGAAGGAAAAACCGGATCGGAAAGACACTCAACGCGGCTTCTTATCTACTTTCCGGAATCTTTTCAGAGGTTGGAAAAAACCTCAAGCGGTTAAATCAACCGCTTCGGTGGCCGGAGACTCGCCGGCAATGAAAGCACCTGATAAGATTGCGCTCAACATCGACGCACTAACGGCGGAATCTCGTCCTAGAAGGAGCGTGGAGATCGAACCTCCCGGTTTGGGCGGCGTCAAGCGGTTCGCATCAGGGAGGCGATCCGGTTCATGGGTCGTCGGCGACGGAGAATAA

mRNA sequence

ATGCCGCAAGTGGATCTGGAAACTCTGGTTTCTGCATGTGCCGGCGGCGGTGCTCACGACCGGAAAATCGCCTGCGAGGAAGCTTTTGACGACGGCGATCACCGGACGGAAGCTGAGAACAGAGAGGTAACAGAGCAGCCGGAGATTCCGCCTGATTTTCCACCGGAATCGTTTTGGCTCTCGAAGGATGCGGAGTTCGATTGGTTAGATCAGAACGCTTTTTACGAGAGGAAAGATTCGACCAAAGGAAGTTCGAATTCAACGAACTTGAATCCAAGTGTGAATCCGGCTTCTAATTCGAATTCTCAACGATTTTCCTTGAACTTCAAATCGAAGGCTTCGATTCTCGGCCTTCCGAAGCTTCACAAGACTTGTTTTGTAGATTCGAAGAGTCGTCGAAATGCGAAATCTGGAAACGCGAGGTTGTTCCCTAAACAATCGGGATCTTCCGAAAAATCGGACTCTGCGCTCGTCGAACCGTCGTCGCCGAAAGTTTCGTGTATGGGGAGAGTGAGATCGAAGCGAGATCGGAGTCGTAGATGGAAGAATCGTCGACGTTCATCCGAACCAGCGCCGCCGAAGGAAAAACCGGATCGGAAAGACACTCAACGCGGCTTCTTATCTACTTTCCGGAATCTTTTCAGAGGTTGGAAAAAACCTCAAGCGGTTAAATCAACCGCTTCGGTGGCCGGAGACTCGCCGGCAATGAAAGCACCTGATAAGATTGCGCTCAACATCGACGCACTAACGGCGGAATCTCGTCCTAGAAGGAGCGTGGAGATCGAACCTCCCGGTTTGGGCGGCGTCAAGCGGTTCGCATCAGGGAGGCGATCCGGTTCATGGGTCGTCGGCGACGGAGAATAA

Coding sequence (CDS)

ATGCCGCAAGTGGATCTGGAAACTCTGGTTTCTGCATGTGCCGGCGGCGGTGCTCACGACCGGAAAATCGCCTGCGAGGAAGCTTTTGACGACGGCGATCACCGGACGGAAGCTGAGAACAGAGAGGTAACAGAGCAGCCGGAGATTCCGCCTGATTTTCCACCGGAATCGTTTTGGCTCTCGAAGGATGCGGAGTTCGATTGGTTAGATCAGAACGCTTTTTACGAGAGGAAAGATTCGACCAAAGGAAGTTCGAATTCAACGAACTTGAATCCAAGTGTGAATCCGGCTTCTAATTCGAATTCTCAACGATTTTCCTTGAACTTCAAATCGAAGGCTTCGATTCTCGGCCTTCCGAAGCTTCACAAGACTTGTTTTGTAGATTCGAAGAGTCGTCGAAATGCGAAATCTGGAAACGCGAGGTTGTTCCCTAAACAATCGGGATCTTCCGAAAAATCGGACTCTGCGCTCGTCGAACCGTCGTCGCCGAAAGTTTCGTGTATGGGGAGAGTGAGATCGAAGCGAGATCGGAGTCGTAGATGGAAGAATCGTCGACGTTCATCCGAACCAGCGCCGCCGAAGGAAAAACCGGATCGGAAAGACACTCAACGCGGCTTCTTATCTACTTTCCGGAATCTTTTCAGAGGTTGGAAAAAACCTCAAGCGGTTAAATCAACCGCTTCGGTGGCCGGAGACTCGCCGGCAATGAAAGCACCTGATAAGATTGCGCTCAACATCGACGCACTAACGGCGGAATCTCGTCCTAGAAGGAGCGTGGAGATCGAACCTCCCGGTTTGGGCGGCGTCAAGCGGTTCGCATCAGGGAGGCGATCCGGTTCATGGGTCGTCGGCGACGGAGAATAA

Protein sequence

MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWLSKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPKLHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRRWKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPDKIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE

Homology

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BLAST of Lsi03G018870 vs. ExPASy TrEMBL
Match: A0A0A0LBF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776980 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.8e-141
Identity = 264/287 (91.99%), Postives = 269/287 (93.73%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEEA DDGD R E ENREVTEQPEIPPDFPPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEEALDDGDPRPEEENREVTEQPEIPPDFPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAFYERKDSTKGSSNSTNLNP+VNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSKSRRNAKSGN RLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRS EPAPPKEKP+RKDT+ GFL TFRNLFR WKK   VK TA  +GDS AMKA D
Sbjct: 181 WKNRRRSCEPAPPKEKPERKDTEPGFLCTFRNLFRCWKKTPVVKPTAPDSGDSLAMKASD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. ExPASy TrEMBL
Match: A0A5A7TPY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003930 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 262/287 (91.29%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEEA DDGD + E ENREVTEQPEIPPDFPPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEEALDDGDRQPEGENREVTEQPEIPPDFPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNP+VNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRS EPAPPKEKP+RK T+RGFLSTF NLFR WKK    K TA  AGDS AMKA D
Sbjct: 181 WKNRRRSCEPAPPKEKPERKGTERGFLSTFWNLFRCWKKTPVAKPTAPDAGDSQAMKASD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KIALNI+ALTAES PRRSVEIEPP LGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KIALNINALTAESCPRRSVEIEPPSLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. ExPASy TrEMBL
Match: A0A6J1F2A4 (uncharacterized protein LOC111441747 OS=Cucurbita moschata OX=3662 GN=LOC111441747 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.1e-135
Identity = 253/287 (88.15%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGG AHDRKIACEE+FDDGDHR E E REVTE+ EIPPD PPESFWL
Sbjct: 1   MPQVDLETLVSACAGGNAHDRKIACEESFDDGDHRQEDEKREVTEKSEIPPDLPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAF+ERKDSTKGSS STNLNPSVNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFFERKDSTKGSSTSTNLNPSVNPPSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSK+RRNAKSGNARLFPKQSGSSEKSDSA+VEP+SPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKARRNAKSGNARLFPKQSGSSEKSDSAVVEPASPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRSSEPA PKE  D+K  +RGFLSTF NLFRGWKKP  VKSTA +A D+PA KAPD
Sbjct: 181 WKNRRRSSEPALPKETSDQKGAKRGFLSTFLNLFRGWKKPPGVKSTAPIAEDAPAAKAPD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KI  NIDALTA S PRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KITPNIDALTAGSLPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. ExPASy TrEMBL
Match: A0A6J1J5P5 (uncharacterized protein LOC111481981 OS=Cucurbita maxima OX=3661 GN=LOC111481981 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 252/287 (87.80%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGG AHDRKIACEE+FDDGDHR   E REVTE+ EIPPD PPESFWL
Sbjct: 1   MPQVDLETLVSACAGGNAHDRKIACEESFDDGDHRQGDEKREVTEKSEIPPDLPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAF+ERKDSTKGSS STNLNPSVNPASNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFFERKDSTKGSSTSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSK+RRNAKSGNARLFPKQSGSSEKSDSA+VEP+SPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKTRRNAKSGNARLFPKQSGSSEKSDSAVVEPASPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRSS+PA PKE  D+K  +RGFLSTF NLFRGWKKP  VKSTA +A D+PA KAPD
Sbjct: 181 WKNRRRSSKPALPKETSDQKGAKRGFLSTFLNLFRGWKKPPGVKSTAPIAEDAPAAKAPD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KI L+IDALTA S PRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KIMLSIDALTAGSLPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. ExPASy TrEMBL
Match: A0A6J1L367 (uncharacterized protein LOC111498691 OS=Cucurbita maxima OX=3661 GN=LOC111498691 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 8.5e-133
Identity = 246/287 (85.71%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEEA  DGDHR E ENREVTEQPE+ PD PPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEEALADGDHRQEDENREVTEQPEVTPDVPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAE+DWLDQNAFYERKDSTKGSSNSTNLNPSVNP +NSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEYDWLDQNAFYERKDSTKGSSNSTNLNPSVNPVTNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHK  FVD+K+RRN+KSGN+RLFPKQSGSS KSDSALVEPSSPKVSCMGRVRSKRDRSR+
Sbjct: 121 LHKAFFVDTKNRRNSKSGNSRLFPKQSGSSGKSDSALVEPSSPKVSCMGRVRSKRDRSRQ 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRR  SEPAPP+E PDRKD++RGF S  R+LFRGWKKP AVK T+ VAG+ PA KA D
Sbjct: 181 WKNRRHPSEPAPPQENPDRKDSKRGFFSPLRSLFRGWKKPPAVKITSPVAGNPPATKASD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KI LNI+ALT ES PRRSVEIEPPGLGGVKR+ASGRRSGSWVVGDGE
Sbjct: 241 KITLNIEALTPESHPRRSVEIEPPGLGGVKRYASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. NCBI nr
Match: XP_038903003.1 (uncharacterized protein LOC120089708 [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 2.1e-149
Identity = 275/287 (95.82%), Postives = 277/287 (96.52%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEE  DDGDHR E ENREVTEQPEIPPDFPPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEETLDDGDHRPEGENREVTEQPEIPPDFPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAE+DWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEYDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSKSRRNAKSGN RLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRSSEPAPPKEKP+RKDT RGFLSTFRNLFRGWKKP AVK TA VAGDSPAMKAPD
Sbjct: 181 WKNRRRSSEPAPPKEKPNRKDTHRGFLSTFRNLFRGWKKPPAVKPTAPVAGDSPAMKAPD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
            IALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 NIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. NCBI nr
Match: XP_004149202.1 (uncharacterized protein LOC101204080 [Cucumis sativus] >KGN59138.1 hypothetical protein Csa_001034 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 7.9e-141
Identity = 264/287 (91.99%), Postives = 269/287 (93.73%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEEA DDGD R E ENREVTEQPEIPPDFPPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEEALDDGDPRPEEENREVTEQPEIPPDFPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAFYERKDSTKGSSNSTNLNP+VNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSKSRRNAKSGN RLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKSRRNAKSGNTRLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRS EPAPPKEKP+RKDT+ GFL TFRNLFR WKK   VK TA  +GDS AMKA D
Sbjct: 181 WKNRRRSCEPAPPKEKPERKDTEPGFLCTFRNLFRCWKKTPVVKPTAPDSGDSLAMKASD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. NCBI nr
Match: KAA0043877.1 (uncharacterized protein E6C27_scaffold236G002130 [Cucumis melo var. makuwa] >TYK25260.1 uncharacterized protein E5676_scaffold352G003930 [Cucumis melo var. makuwa])

HSP 1 Score: 505.8 bits (1301), Expect = 2.5e-139
Identity = 262/287 (91.29%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGGGAHDRKIACEEA DDGD + E ENREVTEQPEIPPDFPPESFWL
Sbjct: 1   MPQVDLETLVSACAGGGAHDRKIACEEALDDGDRQPEGENREVTEQPEIPPDFPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNP+VNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPTVNPTSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRS EPAPPKEKP+RK T+RGFLSTF NLFR WKK    K TA  AGDS AMKA D
Sbjct: 181 WKNRRRSCEPAPPKEKPERKGTERGFLSTFWNLFRCWKKTPVAKPTAPDAGDSQAMKASD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KIALNI+ALTAES PRRSVEIEPP LGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KIALNINALTAESCPRRSVEIEPPSLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. NCBI nr
Match: XP_022934611.1 (uncharacterized protein LOC111441747 [Cucurbita moschata] >KAG6580703.1 hypothetical protein SDJN03_20705, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017461.1 hypothetical protein SDJN02_19326, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135
Identity = 253/287 (88.15%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGG AHDRKIACEE+FDDGDHR E E REVTE+ EIPPD PPESFWL
Sbjct: 1   MPQVDLETLVSACAGGNAHDRKIACEESFDDGDHRQEDEKREVTEKSEIPPDLPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAF+ERKDSTKGSS STNLNPSVNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFFERKDSTKGSSTSTNLNPSVNPPSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSK+RRNAKSGNARLFPKQSGSSEKSDSA+VEP+SPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKARRNAKSGNARLFPKQSGSSEKSDSAVVEPASPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRSSEPA PKE  D+K  +RGFLSTF NLFRGWKKP  VKSTA +A D+PA KAPD
Sbjct: 181 WKNRRRSSEPALPKETSDQKGAKRGFLSTFLNLFRGWKKPPGVKSTAPIAEDAPAAKAPD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KI  NIDALTA S PRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KITPNIDALTAGSLPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

[Close]

BLAST of Lsi03G018870 vs. NCBI nr
Match: XP_023528802.1 (uncharacterized protein LOC111791629 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135
Identity = 252/287 (87.80%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVDLETLVSACAGG AHDRKIACEE+FDDGDHR   E REVTE+ E+PPD PPESFWL
Sbjct: 1   MPQVDLETLVSACAGGNAHDRKIACEESFDDGDHRQGVEKREVTEKSEVPPDLPPESFWL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SKDAEFDWL+QNAF+ERKDSTKGSS STNLNPSVNP SNSNSQRFSLNFKSKASILGLPK
Sbjct: 61  SKDAEFDWLNQNAFFERKDSTKGSSTSTNLNPSVNPPSNSNSQRFSLNFKSKASILGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
           LHKTCFVDSK+RRNAKSGNARLFPKQSGSSEKSDSA+VEP+SPKVSCMGRVRSKRDRSRR
Sbjct: 121 LHKTCFVDSKTRRNAKSGNARLFPKQSGSSEKSDSAVVEPASPKVSCMGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
           WKNRRRSSE A PKE  D+KD +RGFLSTF NLFRGWKKP  VKSTA +A D+PA KAPD
Sbjct: 181 WKNRRRSSESALPKETTDQKDAKRGFLSTFLNLFRGWKKPPGVKSTAPIAEDAPAAKAPD 240

Query: 241 KIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 288
           KI LNIDALTA S PRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE
Sbjct: 241 KITLNIDALTAGSLPRRSVEIEPPGLGGVKRFASGRRSGSWVVGDGE 287

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BLAST of Lsi03G018870 vs. TAIR 10
Match: AT2G36220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52710.1); Has 74 Blast hits to 74 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-45
Identity = 127/281 (45.20%), Postives = 167/281 (59.43%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQVD+E  VS+   GG+  RKI CE   DD        N  V+     P DFPPES++L
Sbjct: 1   MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVS-----PSDFPPESYFL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           S DA+ +WL  NAF++RKDS KG+S   N NP+ NP    +SQRF L  KSKASI+GLPK
Sbjct: 61  SNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNP----SSQRFLL--KSKASIIGLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
             KTCF ++K RR+A  G  R+  K+ GS  K+D +L+EPSSPKVSC+GRVRS+R+RSRR
Sbjct: 121 PQKTCFNEAKQRRHA--GKNRVILKRVGSRIKTDISLLEPSSPKVSCIGRVRSRRERSRR 180

Query: 181 WKNRRRSS-EPAPPKEKPDRKDTQRGFLSTFRNLFR--GWKKPQAVKSTASVAGDSPAMK 240
              ++ S  EP    +KP       GF+++FR +FR  G  K  + + T +      + +
Sbjct: 181 MHRQKSSRVEPVNRVKKP-------GFMASFRAIFRIKGGCKDVSARETHT------STR 240

Query: 241 APDKIALNIDALTAESRPRRSVEIEPPGLGGVKRFASGRRS 279
               I   + A   E       E   PGLGG+ RFASGRR+
Sbjct: 241 NTHDIRSRLPAEADEKSVFDGGEPVVPGLGGMTRFASGRRA 255

[Close]

BLAST of Lsi03G018870 vs. TAIR 10
Match: AT3G52710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-41
Identity = 126/296 (42.57%), Postives = 173/296 (58.45%), Query Frame = 0


Query: 1   MPQVDLETLVSACAGGGAHDRKIACEEAFDDGDHRTEAENREVTEQPEIPPDFPPESFWL 60
           MPQV    + SAC GG   DRKI+CE   DD +      N ++        DFPPES+ L
Sbjct: 1   MPQV----VASACTGGS--DRKISCETLADDNE--DSPHNSKIRPVSISAVDFPPESYSL 60

Query: 61  SKDAEFDWLDQNAFYERKDSTKGSSNSTNLNPSVNPASNSNSQRFSLNFKSKASILGLPK 120
           SK+A+ +WL+ NAF+ERK+S KG+S++   NP+ NP  NS+S R SL  KSKASI+ LPK
Sbjct: 61  SKEAQLEWLNDNAFFERKESQKGNSSAPISNPNTNP--NSSSHRISL--KSKASIIRLPK 120

Query: 121 LHKTCFVDSKSRRNAKSGNARLFPKQSGSSEKSDSALVEPSSPKVSCMGRVRSKRDRSRR 180
             KTCF ++K RRN +     + PK+ GS  KSD  L EP SPKVSC+GRVRSKRDRSRR
Sbjct: 121 PQKTCFNEAKKRRNCRIARTLMIPKRIGSRLKSDPTLSEPCSPKVSCIGRVRSKRDRSRR 180

Query: 181 WKNRRRSSEPAPPKEKPDRKDTQRGFLSTFRNLFRGWKKPQAVKSTASVAGDSPAMKAPD 240
            + R++S      K+KP     + GF ++FR +FR     + + ++ + A     + +P 
Sbjct: 181 MQ-RQKSGRTNSFKDKP-VPVKKPGFFASFRAIFRTGGGCKDLSASGAHAPRRDVVVSPP 240

Query: 241 KIALNID---------ALTAESRP-------RRSVE-IEP--PGLGGVKRFASGRR 278
           ++++                +S P       RRS++  EP  PGLGG+ RF SGRR
Sbjct: 241 RVSVRRSTDIRGRLPPGDVGKSSPQRNSTGSRRSIDGGEPVLPGLGGMTRFTSGRR 282

The following BLAST results are available for this feature:

BLAST of Lsi03G018870 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G018870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBF4	3.8e-141	91.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776980 PE=4 SV=1	[more]
A0A5A7TPY3	1.2e-139	91.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F2A4	3.1e-135	88.15	uncharacterized protein LOC111441747 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]
A0A6J1J5P5	1.2e-134	87.80	uncharacterized protein LOC111481981 OS=Cucurbita maxima OX=3661 GN=LOC111481981...	[more]
A0A6J1L367	8.5e-133	85.71	uncharacterized protein LOC111498691 OS=Cucurbita maxima OX=3661 GN=LOC111498691...	[more]

BLAST of Lsi03G018870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903003.1	2.1e-149	95.82	uncharacterized protein LOC120089708 [Benincasa hispida]	[more]
XP_004149202.1	7.9e-141	91.99	uncharacterized protein LOC101204080 [Cucumis sativus] >KGN59138.1 hypothetical ...	[more]
KAA0043877.1	2.5e-139	91.29	uncharacterized protein E6C27_scaffold236G002130 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022934611.1	6.4e-135	88.15	uncharacterized protein LOC111441747 [Cucurbita moschata] >KAG6580703.1 hypothet...	[more]
XP_023528802.1	6.4e-135	87.80	uncharacterized protein LOC111791629 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G018870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36220.1	1.0e-45	45.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52710.1	1.5e-41	42.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..102
None	No IPR available	PANTHER	PTHR34120:SF2	EXPRESSED PROTEIN	coord: 1..283
None	No IPR available	PANTHER	PTHR34120	EXPRESSED PROTEIN	coord: 1..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018870.1	Lsi03G018870.1	mRNA