Lsi03G018700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Casparian strip membrane protein 1
Location	chr03: 30119872 .. 30121905 (-)
RNA-Seq Expression	Lsi03G018700
Synteny	Lsi03G018700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCCTATCTTCATCCATTTAAAGGCCTGTTCCCAAGCTTCCATTTATCACCATTACACAAAACCATCTAATTAATCAAATTCTCTCTTTGATTTTCCCTCTTTAATTCCCCAGCTCAGAATATGAAGAACTCCGGTGATTCGACCGTCATCGACGTGCCCCCAACCGCTGCCAGCAGCAAAAAGAAAGCGGTTGTTTCCACCGCTCCCCGGCAAGCCGGTGGAGGGGTGAAGCGGGGGCTCGCCATATTTGACTTCGTCCTGAGGCTTGGCGCTTTGGGCGCCGCCTTGGGGGCAGCGGCCGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCCACCTTTCAGTGAGTAGTACTGATTATATAGTACAAGTAGAATTTTTGGCTTATGATTGAAAATTTTAATTTTGTCTATATAATTTAATTTTATCTCAAAATTAAATTATCTACATCGTTATTATATATCATATAAATAACGATTTAAGATTTTCAATCAATTATCGTTAAGCTAAACTCATTTTGACTTTTGTTAAGTTTAATTAAACTATAAGAACATGTTTGGTTGAAACTCTTAAACTATACTAAATTGAAATTAAGCACTAGCCACACCTACGCTAAATTTAATATTTGATCCATTAAGAAATGATTAATAGTTATTTAACTTGATATATTAGTAGAGAAATTTTTTGAAATTAATTATTATATTGTTATTATTTTAAATATCACTAATATTGCACAATAAGTAAGATATTGAATGAGAAGTATGCATTAAGATCCTATTTGATAATTATTTGATTTTTGAATTTGAAGTAATATAAACATCTCTTCCACCTCTACAAGCTAAGTCTTGAAAACTAAAAACAGTAATTTTAAAAATTTATTTTATTTTTTGGAAGTTAACTAAGAATTCAATCTTTTTAACTCATGAAATATGAAAATGAGTGTAAGAAATGGAGAGAAAATAAACTTAATTTTCAAAAATAAAAAATAAAAAAACCATCAACAAACTATACTAAATAATTAAGACTCTATTCTGTAACTTTTTTTTTTCTTTTTTTTGAAAATTAAGTCTATAAAATATCAATTCTAGATTTGTTATTTACCTCTTACTAATGTATCAATCTAAATTTTGAAAATAAAAAAAAAATAGTTTTTAAAAATTGGCATTTATTTTTTAGAATTTGACTTACTATTCTAAATGGGGGAAAAAATAGATTTGTGAATTTTTAAAATTATATGTGAAAACTTTTTGAGTTTAGTGATGATAATGATGATATTTTGATGTAGATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGTTCTCTCGCTACCATTCTCCATCGTCTGCATCGTCCGCCCCGGCGCGGTCGGAATCCGATTGCTCCTCCTCATTCTCGACACTGTATAACTCCCAAATCAAATTCAAATTCGTTAACATTATTCAATAACCACTTTCAATGGATTAAATTTGATATAAATTTACTATATATATACACATTTGCAGGTGGTTCTCACATTGGCCACGTCAGCTGCCGCCGCCGCAGCCGCCATAGTGTATCTAGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCCATCTGCGACCAGTTTGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTCGGCGCTTTCATCGCCGCCGTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTCGCCATCAGAAACACTCACTAAACGCCGCCGTCGGGGGCGGCGGACGTTCAACGGTCCGATCTCTGTGTTTTTTGTTGTTAAATATTTCGTATTGAAGGTCTTTGTGTTGTAATTTTACCTTTTTTTCCCCTGATCTCACTCTCTGTCTTGGTTTGGTTGGTCTTGGAAAATTTGGTTAAATATTAAACCTGTAATTTTGTGCTTAATACGTTTACTCCTAATGTTTGATATATATTATTTAAAAATGAAGGGGGTATTTTCAGCATAATTTTATCAAA

mRNA sequence

CTCTTCCTATCTTCATCCATTTAAAGGCCTGTTCCCAAGCTTCCATTTATCACCATTACACAAAACCATCTAATTAATCAAATTCTCTCTTTGATTTTCCCTCTTTAATTCCCCAGCTCAGAATATGAAGAACTCCGGTGATTCGACCGTCATCGACGTGCCCCCAACCGCTGCCAGCAGCAAAAAGAAAGCGGTTGTTTCCACCGCTCCCCGGCAAGCCGGTGGAGGGGTGAAGCGGGGGCTCGCCATATTTGACTTCGTCCTGAGGCTTGGCGCTTTGGGCGCCGCCTTGGGGGCAGCGGCCGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCCACCTTTCAATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGTTCTCTCGCTACCATTCTCCATCGTCTGCATCGTCCGCCCCGGCGCGGTCGGAATCCGATTGCTCCTCCTCATTCTCGACACTGTGGTTCTCACATTGGCCACGTCAGCTGCCGCCGCCGCAGCCGCCATAGTGTATCTAGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCCATCTGCGACCAGTTTGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTCGGCGCTTTCATCGCCGCCGTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTCGCCATCAGAAACACTCACTAAACGCCGCCGTCGGGGGCGGCGGACGTTCAACGGTCCGATCTCTGTGTTTTTTGTTGTTAAATATTTCGTATTGAAGGTCTTTGTGTTGTAATTTTACCTTTTTTTCCCCTGATCTCACTCTCTGTCTTGGTTTGGTTGGTCTTGGAAAATTTGGTTAAATATTAAACCTGTAATTTTGTGCTTAATACGTTTACTCCTAATGTTTGATATATATTATTTAAAAATGAAGGGGGTATTTTCAGCATAATTTTATCAAA

Coding sequence (CDS)

ATGAAGAACTCCGGTGATTCGACCGTCATCGACGTGCCCCCAACCGCTGCCAGCAGCAAAAAGAAAGCGGTTGTTTCCACCGCTCCCCGGCAAGCCGGTGGAGGGGTGAAGCGGGGGCTCGCCATATTTGACTTCGTCCTGAGGCTTGGCGCTTTGGGCGCCGCCTTGGGGGCAGCGGCCGCCATGGGAACAAGTGATGAAACTCTCCCTTTCTTCACTCAGTTCTTCCAGTTTGAAGCTAGCTATGATGATCTCCCCACCTTTCAATTCTTCCTCATAGCAATGGGAATTGTAGCAGGCTACCTGGTTCTCTCGCTACCATTCTCCATCGTCTGCATCGTCCGCCCCGGCGCGGTCGGAATCCGATTGCTCCTCCTCATTCTCGACACTGTGGTTCTCACATTGGCCACGTCAGCTGCCGCCGCCGCAGCCGCCATAGTGTATCTAGCCCACGACGGCAACTCCAGCACCAACTGGCTGGCCATCTGCGACCAGTTTGGCGATTTCTGCCAGAAAGTTAGCGGCGCGGTGGTCGGCGCTTTCATCGCCGCCGTTCTGATGATGTTCCTCATCTTGTTATCTGCTTTCGCCATCAGAAACACTCACTAA

Protein sequence

MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIAAVLMMFLILLSAFAIRNTH

Homology

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BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot
Match: B9IIR5 (Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_576556 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.2e-67
Identity = 141/193 (73.06%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 7   STVIDVPPTAASSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAAAMGTSD 66
           ST ID+P +++ SK  A +  AP +  GG K+G+AIFDF+LRL A+  AL AAA+MGTSD
Sbjct: 5   STEIDMPESSSVSKGTAPLIAAPMKEKGGYKKGIAIFDFILRLAAIATALAAAASMGTSD 64

Query: 67  ETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRLLLL 126
           ETLPFFTQFFQF+ASYDDLPTFQFF+IAM IVAGYLVLSLPFSIV IVRP A G RLLL+
Sbjct: 65  ETLPFFTQFFQFQASYDDLPTFQFFVIAMAIVAGYLVLSLPFSIVAIVRPHAAGPRLLLI 124

Query: 127 ILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIAAVL 186
           ILDTV LTL T+A AAAAAIVYLAH+GNSSTNWLAIC QFGDFCQK SGAVV +FI  V+
Sbjct: 125 ILDTVALTLNTAAGAAAAAIVYLAHNGNSSTNWLAICQQFGDFCQKNSGAVVASFITVVI 184

Query: 187 MMFLILLSAFAIR 200
            +FL++LSAFA+R
Sbjct: 185 FVFLLVLSAFALR 197

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BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot
Match: B9HBX2 (Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_763057 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.6e-66
Identity = 137/194 (70.62%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 6   DSTVIDVPPTAASSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAAAMGTS 65
           +S  ID+P +++ +K KA +    R   GG ++G+AIFDF+LRL A+  AL AAAAMGTS
Sbjct: 4   ESAAIDIPESSSVAKGKAPLIAVSRNEKGGYRKGIAIFDFILRLAAIATALAAAAAMGTS 63

Query: 66  DETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRLLL 125
           DETLPFFTQFFQF+ASYDDLPTFQFF+IA+ IV GYLVLSLPFSIV IVRP AVG RLLL
Sbjct: 64  DETLPFFTQFFQFQASYDDLPTFQFFVIAIAIVGGYLVLSLPFSIVAIVRPHAVGPRLLL 123

Query: 126 LILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIAAV 185
           +ILD V LTL T+A AAAAAIVYLAH+GNS+TNWLAIC Q+GDFCQKVSGAVV +FI  V
Sbjct: 124 IILDAVALTLNTAAGAAAAAIVYLAHNGNSNTNWLAICQQYGDFCQKVSGAVVASFITVV 183

Query: 186 LMMFLILLSAFAIR 200
           + +FLI+LSAFA+R
Sbjct: 184 IFVFLIVLSAFALR 197

[Close]

BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot
Match: P0DI43 (Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.0e-64
Identity = 136/196 (69.39%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 4   SGDSTVIDVPPTAASSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAAAMG 63
           SGD   IDVP ++A +K KA +   PR+   G K+GL IFDF+LRLGA+ AAL AAA MG
Sbjct: 3   SGDHAAIDVPESSAVAKGKAPLIATPREQKSGFKKGLGIFDFLLRLGAIIAALAAAATMG 62

Query: 64  TSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRL 123
           TSDETLPFFTQFFQFEASYDDLPTF FF+IAM ++ GYLVLSLPFSIV IVRP AV  RL
Sbjct: 63  TSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSIVTIVRPHAVAPRL 122

Query: 124 LLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIA 183
           LL ILD V LTL T+A AAAAAIVYLAH+GN +TNWLAIC QFGDFCQ+VSGAVV +F+ 
Sbjct: 123 LLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFCQEVSGAVVASFVT 182

Query: 184 AVLMMFLILLSAFAIR 200
            V++M L+LLS  A++
Sbjct: 183 VVVLMSLVLLSGVALK 198

[Close]

BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot
Match: P0DI61 (Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.4e-64
Identity = 135/207 (65.22%), Postives = 167/207 (80.68%), Query Frame = 0


Query: 4   SGDSTVIDVPPTAASS----KKKA----VVSTAPRQAGGGVKRGLAIFDFVLRLGALGAA 63
           +G+ST ID+ P   +S    KKK+    + +  P +    +KRGLAIFDFVLR+G L +A
Sbjct: 3   TGESTAIDIAPETNNSGPIGKKKSTTPLLAAPVPDRGTHRMKRGLAIFDFVLRIGVLASA 62

Query: 64  LGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVR 123
           L AAAAMGTS++TLPFFTQFFQFEASYDDLPTFQFF++AM +VAGY+VLS+PFSIVCI+R
Sbjct: 63  LAAAAAMGTSEQTLPFFTQFFQFEASYDDLPTFQFFVVAMAVVAGYVVLSIPFSIVCIIR 122

Query: 124 PGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSG 183
           P A G R+LLLILD+V LTL T+AA AAAA+V LAH GNSSTNWLAIC+QFGDFCQ+ SG
Sbjct: 123 PHAAGPRVLLLILDSVALTLNTAAAGAAAAVVSLAHSGNSSTNWLAICNQFGDFCQQASG 182

Query: 184 AVVGAFIAAVLMMFLILLSAFAIRNTH 203
           AVVG+F A +L + LIL SA +++N+H
Sbjct: 183 AVVGSFAAVLLFLLLILFSALSLKNSH 209

[Close]

BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot
Match: B9SX12 (Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-62
Identity = 133/197 (67.51%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 7   STVIDVP-PTAASSKKKAVV---STAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAAAM 66
           ST I++P  ++A +K KA +   S++  +  GG K+G+AIFDF+LRLGA+ +AL AAA M
Sbjct: 2   STTIEIPAESSAVAKGKAPLIGASSSSYEKKGGYKKGIAIFDFILRLGAVISALSAAATM 61

Query: 67  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIR 126
           GTSDETLPFFTQFFQFEA YDD PTFQFF+IAMG V GYLVLSLPFS+V I+RP AVGIR
Sbjct: 62  GTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPHAVGIR 121

Query: 127 LLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFI 186
           LLLLILDTV LTL T+AAAAAAAIVYLAH+GN S NWLA+C QFGDFCQKVSG VV +F+
Sbjct: 122 LLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGVVASFV 181

Query: 187 AAVLMMFLILLSAFAIR 200
           + ++ + L+++SA A+R
Sbjct: 182 SVLVFLLLVVMSAVALR 198

[Close]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL
Match: A0A0A0LBG8 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVST-APRQAGGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNSGDSTVIDVPPTAASSKKKAVVST AP QA GGVKRGL+IFDFVLRLGALGAALGAA
Sbjct: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRP AV
Sbjct: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           G+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQF DFCQKVSGAV+G
Sbjct: 121 GLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVIG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           AFIAA+LMMFL+LLSAF IRNTH
Sbjct: 181 AFIAALLMMFLVLLSAFGIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL
Match: A0A5D3DPU1 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004150 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTA-ASSKKKAVVST-APRQAGGGVKRGLAIFDFVLRLGALGAALGA 60
           MKNSGDSTVIDVPPTA +SSKKKAVVST AP+QA GGVKRGL+IFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAAVLMMFLILLSAFAIRNTH 203
           GAFIAA+LMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL
Match: A0A1S3B7G3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTA-ASSKKKAVVST-APRQAGGGVKRGLAIFDFVLRLGALGAALGA 60
           MKNSGDSTVIDVPPTA +SSKKKAVVST AP+QA GGVKRGL+IFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAAVLMMFLILLSAFAIRNTH 203
           GAFIAA+LMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL
Match: A0A6J1G046 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 166/203 (81.77%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQA-GGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNS DSTVIDVPPTA SSK KA  S A RQ   GG+KRGL +FDFVLRLGALGAAL AA
Sbjct: 1   MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           A MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ LS+PFSIVCIVRP AV
Sbjct: 61  ATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           GIRL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQF DFCQ +SGAVVG
Sbjct: 121 GIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVVG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           +F+A +L+MFL+LLSAFAIRNTH
Sbjct: 181 SFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL
Match: A0A6J1L1G0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79
Identity = 165/203 (81.28%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQA-GGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNS DSTVIDVP T  SSK KA  S A RQA  GG+KRGL +FDFVLRLGALGAAL AA
Sbjct: 1   MKNSNDSTVIDVPLTTGSSKSKAAASVASRQANAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           A MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ LS+PFSIVCIVRP AV
Sbjct: 61  ATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           GIRL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQF DFCQ +SGAVVG
Sbjct: 121 GIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVVG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           +F+A +L+MFL+LLSAFAIRNTH
Sbjct: 181 SFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. NCBI nr
Match: XP_038905871.1 (casparian strip membrane protein 2 [Benincasa hispida])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAA 60
           MKNSGDSTVIDVPPTA SSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSKKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAALGAAA 60

Query: 61  AMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVG 120
           +MGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVG
Sbjct: 61  SMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVG 120

Query: 121 IRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGA 180
           IRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQF DFCQK+SGAV+GA
Sbjct: 121 IRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFEDFCQKISGAVIGA 180

Query: 181 FIAAVLMMFLILLSAFAIRNTH 203
           FIAAVLMMFLILLSAFAIRNTH
Sbjct: 181 FIAAVLMMFLILLSAFAIRNTH 202

[Close]

BLAST of Lsi03G018700 vs. NCBI nr
Match: XP_004149191.1 (casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical protein Csa_001066 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 6.9e-91
Identity = 190/203 (93.60%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVST-APRQAGGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNSGDSTVIDVPPTAASSKKKAVVST AP QA GGVKRGL+IFDFVLRLGALGAALGAA
Sbjct: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAAPGQASGGVKRGLSIFDFVLRLGALGAALGAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRP AV
Sbjct: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPRAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           G+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGN+STNWLAICDQF DFCQKVSGAV+G
Sbjct: 121 GLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNTSTNWLAICDQFDDFCQKVSGAVIG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           AFIAA+LMMFL+LLSAF IRNTH
Sbjct: 181 AFIAALLMMFLVLLSAFGIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. NCBI nr
Match: XP_008442871.1 (PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa] >TYK25280.1 casparian strip membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTA-ASSKKKAVVST-APRQAGGGVKRGLAIFDFVLRLGALGAALGA 60
           MKNSGDSTVIDVPPTA +SSKKKAVVST AP+QA GGVKRGL+IFDFV+RLGALGAALGA
Sbjct: 1   MKNSGDSTVIDVPPTAGSSSKKKAVVSTAAPQQASGGVKRGLSIFDFVIRLGALGAALGA 60

Query: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGA 120
           AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYL LSLPFSIVCIVRPGA
Sbjct: 61  AAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLALSLPFSIVCIVRPGA 120

Query: 121 VGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVV 180
           VG+RLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQF DFCQ +SGAV+
Sbjct: 121 VGLRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFEDFCQNISGAVI 180

Query: 181 GAFIAAVLMMFLILLSAFAIRNTH 203
           GAFIAA+LMMFLILLSAFAIRNTH
Sbjct: 181 GAFIAALLMMFLILLSAFAIRNTH 204

[Close]

BLAST of Lsi03G018700 vs. NCBI nr
Match: XP_022945176.1 (casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028124.1 Casparian strip membrane protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308.9 bits (790), Expect = 3.2e-80
Identity = 166/203 (81.77%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQA-GGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNS DSTVIDVPPTA SSK KA  S A RQ   GG+KRGL +FDFVLRLGALGAAL AA
Sbjct: 1   MKNSNDSTVIDVPPTAGSSKSKAAASVASRQVNAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           A MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ LS+PFSIVCIVRP AV
Sbjct: 61  ATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           GIRL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQF DFCQ +SGAVVG
Sbjct: 121 GIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVVG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           +F+A +L+MFL+LLSAFAIRNTH
Sbjct: 181 SFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. NCBI nr
Match: XP_023005173.1 (casparian strip membrane protein 1-like [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 4.6e-79
Identity = 165/203 (81.28%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKKKAVVSTAPRQA-GGGVKRGLAIFDFVLRLGALGAALGAA 60
           MKNS DSTVIDVP T  SSK KA  S A RQA  GG+KRGL +FDFVLRLGALGAAL AA
Sbjct: 1   MKNSNDSTVIDVPLTTGSSKSKAAASVASRQANAGGMKRGLGVFDFVLRLGALGAALAAA 60

Query: 61  AAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAV 120
           A MGTSDETLPFFTQFFQFEASY+DLPTFQFFLIAMGI+AGY+ LS+PFSIVCIVRP AV
Sbjct: 61  ATMGTSDETLPFFTQFFQFEASYEDLPTFQFFLIAMGIIAGYMALSVPFSIVCIVRPAAV 120

Query: 121 GIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVG 180
           GIRL+L ILDTV LT ATSAAAAAAA+VYLAH GNS+TNWLAICDQF DFCQ +SGAVVG
Sbjct: 121 GIRLVLFILDTVALTFATSAAAAAAAMVYLAHSGNSNTNWLAICDQFEDFCQNISGAVVG 180

Query: 181 AFIAAVLMMFLILLSAFAIRNTH 203
           +F+A +L+MFL+LLSAFAIRNTH
Sbjct: 181 SFVAVLLIMFLVLLSAFAIRNTH 203

[Close]

BLAST of Lsi03G018700 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 223.4 bits (568), Expect = 1.6e-58
Identity = 128/197 (64.97%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 6   DSTVIDVPPTAAS-SKKKAVVSTAPRQ--AGGGVKRGLAIFDFVLRLGALGAALGAAAAM 65
           DS  +DVP  ++S  K KA +    R     GG KRGL+IFDF+LRL A+ AAL AAA M
Sbjct: 4   DSIAVDVPAESSSVIKGKAPLLGLARDHTGSGGYKRGLSIFDFLLRLAAIVAALAAAATM 63

Query: 66  GTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIR 125
           GTSDETLPFFTQF QFEASYDDLPTFQFF++A+ IVAGYLVLSLPFS+V IVRP AV  R
Sbjct: 64  GTSDETLPFFTQFLQFEASYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPR 123

Query: 126 LLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFI 185
           LLLL+LDT  L L T+AA+AAAAIVYLAH+GN++TNWL IC QFGDFCQK SGAVV AF 
Sbjct: 124 LLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFA 183

Query: 186 AAVLMMFLILLSAFAIR 200
           +   +  L+++S  +++
Sbjct: 184 SVTFLAILVVISGVSLK 200

[Close]

BLAST of Lsi03G018700 vs. TAIR 10
Match: AT3G11550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 130/204 (63.73%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MKNSGDSTVIDVPPTAASSKK-KAVVSTAPR----QAGGGVKRGLAIFDFVLRLGALGAA 60
           MKN  +ST IDVP  ++S+ K KA +    R       GG  RGLAIFDF+LRL A+ AA
Sbjct: 1   MKN--ESTFIDVPAESSSAMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAA 60

Query: 61  LGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVR 120
           L AAA MGTSDETLPFFTQF QFEASYDDLPTFQFF+IAM +V GYLVLSLP S+V I+R
Sbjct: 61  LAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILR 120

Query: 121 PGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSG 180
           P A   RLLLL+LDT VL L T+AA++AAAI YLAH GN +TNWL IC QFGDFCQK SG
Sbjct: 121 PLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSG 180

Query: 181 AVVGAFIAAVLMMFLILLSAFAIR 200
           AVV AF++ V    L+++S  A++
Sbjct: 181 AVVSAFVSVVFFTILVVISGVALK 202

[Close]

BLAST of Lsi03G018700 vs. TAIR 10
Match: AT2G36100.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 211.1 bits (536), Expect = 8.4e-55
Identity = 126/204 (61.76%), Postives = 150/204 (73.53%), Query Frame = 0


Query: 6   DSTVIDV--PPTAASS--------KKKAVVSTAPRQAGGGVKRGLAIFDFVLRLGALGAA 65
           +ST IDV  P T   S        KKK  V+ A R   GG KRGLAIFDF+LRL A+   
Sbjct: 4   ESTTIDVGEPSTVTKSSSHVVKDAKKKGFVAVASR---GGAKRGLAIFDFLLRLAAIAVT 63

Query: 66  LGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQFFLIAMGIVAGYLVLSLPFSIVCIVR 125
           +GAA+ M T++ETLPFFTQF QF+A YDDLP FQ+F+IA+ +VA YLVLSLPFSIV IVR
Sbjct: 64  IGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVR 123

Query: 126 PGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYLAHDGNSSTNWLAICDQFGDFCQKVSG 185
           P AV  RL+LLI DT+V+TL TSAAAAAA+I YLAH+GN STNWL IC QFGDFCQ VS 
Sbjct: 124 PHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHNGNQSTNWLPICQQFGDFCQNVST 183

Query: 186 AVVGAFIAAVLMMFLILLSAFAIR 200
           AVV   IA +  + LI++SA A++
Sbjct: 184 AVVADSIAILFFIVLIIISAIALK 204

[Close]

BLAST of Lsi03G018700 vs. TAIR 10
Match: AT2G27370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 110/172 (63.95%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 30  RQAGGGVKRGLAIFDFVLRLGALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQ 89
           + +  G KRG+AIFDFVLRL A   A+ AAA M T++ETLPFFTQF QF+A Y DLPT  
Sbjct: 49  KMSPAGWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMS 108

Query: 90  FFLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYL 149
            F+I   IV GYL LSLPFSIVCI+RP AV  RL L++ DTV++ L   AA+A+AAIVYL
Sbjct: 109 SFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYL 168

Query: 150 AHDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIAAVLMMFLILLSAFAIRNT 202
           AH+GNSS+NWL +C QFGDFCQ  SGAVV +FIAA L+MFL++LSAFA++ T
Sbjct: 169 AHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFALKRT 220

[Close]

BLAST of Lsi03G018700 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 169.5 bits (428), Expect = 2.8e-42
Identity = 90/172 (52.33%), Postives = 125/172 (72.67%), Query Frame = 0


Query: 31  QAGGGVKRGLAIFDFVLRLGALGAALGAAAAMGTSDETLPFFTQFFQFEASYDDLPTFQF 90
           Q  G + R +AI +F+LR+ A    +G+A  MGT+ ETLPFFTQF +F+A Y+DLP   F
Sbjct: 16  QKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTF 75

Query: 91  FLIAMGIVAGYLVLSLPFSIVCIVRPGAVGIRLLLLILDTVVLTLATSAAAAAAAIVYLA 150
           F++A  +V+GYL+LSL  + V IV+      R+LL+ILD  +L L TS A++AAAIVYLA
Sbjct: 76  FVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLA 135

Query: 151 HDGNSSTNWLAICDQFGDFCQKVSGAVVGAFIAAVLMMFLILLSAFAIRNTH 203
           H+GN+ TNW AIC QF  FC+++SG+++G+FIA VL++ LILLSA A+   H
Sbjct: 136 HNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRRH 187

The following BLAST results are available for this feature:

BLAST of Lsi03G018700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9IIR5	4.2e-67	73.06	Casparian strip membrane protein 2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
B9HBX2	4.6e-66	70.62	Casparian strip membrane protein 1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_...	[more]
P0DI43	2.0e-64	69.39	Casparian strip membrane protein 1 OS=Theobroma cacao OX=3641 PE=2 SV=1	[more]
P0DI61	4.4e-64	65.22	Casparian strip membrane protein 1 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
B9SX12	1.4e-62	67.51	Casparian strip membrane protein 1 OS=Ricinus communis OX=3988 GN=RCOM_1259250 P...	[more]

BLAST of Lsi03G018700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBG8	3.3e-91	93.60	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G777660 PE=3 SV=1	[more]
A0A5D3DPU1	1.3e-90	93.14	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B7G3	1.3e-90	93.14	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103486637 PE=3 SV=1	[more]
A0A6J1G046	1.5e-80	81.77	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449494 PE=3 SV=1	[more]
A0A6J1L1G0	2.2e-79	81.28	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111498282 PE=3 SV=1	[more]

BLAST of Lsi03G018700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905871.1	1.2e-95	97.03	casparian strip membrane protein 2 [Benincasa hispida]	[more]
XP_004149191.1	6.9e-91	93.60	casparian strip membrane protein 2 [Cucumis sativus] >KGN59158.1 hypothetical pr...	[more]
XP_008442871.1	2.6e-90	93.14	PREDICTED: casparian strip membrane protein 2 [Cucumis melo] >KAA0043855.1 caspa...	[more]
XP_022945176.1	3.2e-80	81.77	casparian strip membrane protein 1-like [Cucurbita moschata] >KAG6596587.1 Caspa...	[more]
XP_023005173.1	4.6e-79	81.28	casparian strip membrane protein 1-like [Cucurbita maxima]	[more]

BLAST of Lsi03G018700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06200.1	1.6e-58	64.97	Uncharacterised protein family (UPF0497)	[more]
AT3G11550.1	3.1e-57	63.73	Uncharacterised protein family (UPF0497)	[more]
AT2G36100.1	8.4e-55	61.76	Uncharacterised protein family (UPF0497)	[more]
AT2G27370.1	1.1e-51	63.95	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	2.8e-42	52.33	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 45..197 e-value: 1.8E-43 score: 146.0
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 38..186 e-value: 7.7E-47 score: 158.8
None	No IPR available	PANTHER	PTHR11615:SF332	CASP-LIKE PROTEIN	coord: 12..201
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 12..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018700.1	Lsi03G018700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007043	cell-cell junction assembly
biological_process	GO:0042545	cell wall modification
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding