Lsi03G018560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tropinone reductase-like 1
Location	chr03: 29998112 .. 29998564 (+)
RNA-Seq Expression	Lsi03G018560
Synteny	Lsi03G018560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCATTTTGGGGGGCAAAACATGGAGCTAGAGTAATGATACCGGAGAAAAGTGGGTGCATTCTATTCACAAGTAGCGCAACCACTAACATAGCCGGCCTCTCATCGCACCCATACACAGCCTCCAAATGCGCAATCCTAGGGTTGGTTAGGAACCTAGCCGCCGAGCTTGGCCAGCACGGAATTAGAGTCAACTGTGTTGCCCCCTTCGTCGTGGCCACTGGGATTGCAGGGCCTAGAGACCCAGTGCAGGCGGAGGCGCTCGAGACCATGGTAACTAGCTGGGCCAATCTCAAAGGTCGCGTCCTTAAGGCCGACGACATAGCTAAGGCCGCGCTCTACTTGGCTAGCGACGACGCCAACTATGTCAGTGGCCTTAATCTTGTGGTGGATGGAGGCTACAGTGTTGTCAATCCTTCCATGCTTAAGACTCTTAGGCTCATGGACTGA

mRNA sequence

ATGGGAGCATTTTGGGGGGCAAAACATGGAGCTAGAGTAATGATACCGGAGAAAAGTGGGTGCATTCTATTCACAAGTAGCGCAACCACTAACATAGCCGGCCTCTCATCGCACCCATACACAGCCTCCAAATGCGCAATCCTAGGGTTGGTTAGGAACCTAGCCGCCGAGCTTGGCCAGCACGGAATTAGAGTCAACTGTGTTGCCCCCTTCGTCGTGGCCACTGGGATTGCAGGGCCTAGAGACCCAGTGCAGGCGGAGGCGCTCGAGACCATGGTAACTAGCTGGGCCAATCTCAAAGGTCGCGTCCTTAAGGCCGACGACATAGCTAAGGCCGCGCTCTACTTGGCTAGCGACGACGCCAACTATGTCAGTGGCCTTAATCTTGTGGTGGATGGAGGCTACAGTGTTGTCAATCCTTCCATGCTTAAGACTCTTAGGCTCATGGACTGA

Coding sequence (CDS)

ATGGGAGCATTTTGGGGGGCAAAACATGGAGCTAGAGTAATGATACCGGAGAAAAGTGGGTGCATTCTATTCACAAGTAGCGCAACCACTAACATAGCCGGCCTCTCATCGCACCCATACACAGCCTCCAAATGCGCAATCCTAGGGTTGGTTAGGAACCTAGCCGCCGAGCTTGGCCAGCACGGAATTAGAGTCAACTGTGTTGCCCCCTTCGTCGTGGCCACTGGGATTGCAGGGCCTAGAGACCCAGTGCAGGCGGAGGCGCTCGAGACCATGGTAACTAGCTGGGCCAATCTCAAAGGTCGCGTCCTTAAGGCCGACGACATAGCTAAGGCCGCGCTCTACTTGGCTAGCGACGACGCCAACTATGTCAGTGGCCTTAATCTTGTGGTGGATGGAGGCTACAGTGTTGTCAATCCTTCCATGCTTAAGACTCTTAGGCTCATGGACTGA

Protein sequence

MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQHGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDDANYVSGLNLVVDGGYSVVNPSMLKTLRLMD

Homology

[Close]

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot
Match: H9BFQ1 (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-40
Identity = 81/147 (55.10%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQH 61
           GAF GAKH  RVM+ ++ GCILFTSS  T+IAGLS H Y ASK  + GL +NL  ELG++
Sbjct: 125 GAFLGAKHATRVMVQQRKGCILFTSSVCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKY 184

Query: 62  GIRVNCVAPFVVATGIAGPRDPVQA--EALETMVTSWANLKGRVLKADDIAKAALYLASD 121
           GIRVNC++P+ + TG++      +A  E +E M++    L G+ L+AD IAKAAL+LASD
Sbjct: 185 GIRVNCISPYGLVTGVSNVSGEGEANREFVEAMLSELGTLSGQTLRADGIAKAALFLASD 244

Query: 122 DANYVSGLNLVVDGGYSVVNPSMLKTL 147
           +A YVSG+N+VVDGGYSVVNP ++ ++
Sbjct: 245 EAYYVSGINMVVDGGYSVVNPRLVDSI 271

[Close]

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot
Match: H9BFQ0 (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-40
Identity = 81/141 (57.45%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQH 61
           GAF GAKH  RVM+ ++ GCILFTSS  T+IAGLS H Y ASK  + GL +NL  ELG++
Sbjct: 125 GAFLGAKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKY 184

Query: 62  GIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDDA 121
           GIRVNC++P+ + TGI+   +    E +E M++    L G+ L+AD IAKAAL+LASD+A
Sbjct: 185 GIRVNCISPYGLVTGISNISE-ANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDEA 244

Query: 122 NYVSGLNLVVDGGYSVVNPSM 143
            YVSG+N+VVDGGYSVVNP +
Sbjct: 245 YYVSGINMVVDGGYSVVNPRL 264

[Close]

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot
Match: Q7FAE1 (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.0e-35
Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           +G F G KH ARVM P + G I+ T+S +++++G +SH YT SK A++G   N A ELG+
Sbjct: 127 VGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGR 186

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGR-VLKADDIAKAALYLASD 120
           HGIRVNCV+P  VAT +A     +  EA+E ++ + ANLKG   LKADDIA AAL+LASD
Sbjct: 187 HGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASD 246

Query: 121 DANYVSGLNLVVDGGYSVVNPS 142
           D  YVSG NL VDGG SVVN S
Sbjct: 247 DGRYVSGQNLRVDGGLSVVNSS 268

[Close]

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot
Match: A3F5F0 (Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34
Identity = 78/147 (53.06%), Postives = 102/147 (69.39%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLS-SHPYTASKCAILGLVRNLAAELGQ 61
           GAF  AKH ARVMIP K G I+FT+S ++  AG   SH YTA+K A+LGL  +L  ELGQ
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGQ 187

Query: 62  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 121
           HGIRVNCV+P+VVA+ +      V +  +E +    ANLKG +L+A+D+A A  YLA D+
Sbjct: 188 HGIRVNCVSPYVVASPLLTDVFGVDSSRVEELAHQAANLKGILLRAEDVADAVAYLAGDE 247

Query: 122 ANYVSGLNLVVDGGYSVVNPSMLKTLR 148
           + YVSGLNLV+DGGY+  NP+    L+
Sbjct: 248 SKYVSGLNLVIDGGYTRTNPAFPTALK 274

[Close]

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot
Match: Q94KL8 (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33
Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLS-SHPYTASKCAILGLVRNLAAELGQ 61
           GAF  AKH ARVMIP K G I+FT+S ++  AG   SH YTA+K A+LGL  +L  ELG+
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGE 187

Query: 62  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 121
           +GIRVNCV+P++VA+ +      V +  +E +    ANLKG +L+A+D+A A  YLA D+
Sbjct: 188 YGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 247

Query: 122 ANYVSGLNLVVDGGYSVVNPSMLKTLR 148
           + YVSGLNLV+DGGY+  NP+    L+
Sbjct: 248 SKYVSGLNLVIDGGYTRTNPAFPTALK 274

[Close]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL
Match: Q9SBM0 (Wts2L OS=Citrullus lanatus OX=3654 GN=wts2L PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.4e-73
Identity = 141/150 (94.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIPEK+GCILFTSSATTNIAGLSSHPY ASKCA+LGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAARVMIPEKNGCILFTSSATTNIAGLSSHPYAASKCAVLGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAG RDP+QAEALETMVT+WANLKGRVLKADDIAKAALYLASDD
Sbjct: 184 HGIRVNCVAPFVVATGIAGSRDPMQAEALETMVTTWANLKGRVLKADDIAKAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNP+MLKTL+LMD
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPTMLKTLKLMD 273

[Close]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL
Match: A0A5D3DNU4 (Tropinone reductase-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004270 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIP+K+GCILFT+SATTNIAGLSSHPY +SKCA+LGLVRNL+AELGQ
Sbjct: 124 MGAFWGAKHAARVMIPQKNGCILFTTSATTNIAGLSSHPYASSKCAVLGLVRNLSAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGPR+P+QAEALETMVTSWANLKG VLKADDIA AALYLASDD
Sbjct: 184 HGIRVNCVAPFVVATGIAGPRNPMQAEALETMVTSWANLKGCVLKADDIANAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           A YVSGLNLVVDGGYSVVNPSMLKTL+ MD
Sbjct: 244 AKYVSGLNLVVDGGYSVVNPSMLKTLKFMD 273

[Close]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL
Match: A0A1S3B6U4 (tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103486652 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIP+K+GCILFT+SATTNIAGLSSHPY +SKCA+LGLVRNL+AELGQ
Sbjct: 124 MGAFWGAKHAARVMIPQKNGCILFTTSATTNIAGLSSHPYASSKCAVLGLVRNLSAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGPR+P+QAEALETMVTSWANLKG VLKADDIA AALYLASDD
Sbjct: 184 HGIRVNCVAPFVVATGIAGPRNPMQAEALETMVTSWANLKGCVLKADDIANAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           A YVSGLNLVVDGGYSVVNPSMLKTL+ MD
Sbjct: 244 AKYVSGLNLVVDGGYSVVNPSMLKTLKFMD 273

[Close]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL
Match: A0A6J1IY89 (tropinone reductase-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111481723 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVM+PEK GCILFT+SATTNIAGLS+HPY ASKCA+LGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAARVMVPEKKGCILFTTSATTNIAGLSTHPYAASKCAVLGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGP DP QAEALE MVT WANLKG VLKADDIA+AALYLASD+
Sbjct: 184 HGIRVNCVAPFVVATGIAGPTDPKQAEALENMVTGWANLKGCVLKADDIARAALYLASDE 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNPSMLKTL+LMD
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPSMLKTLKLMD 273

[Close]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL
Match: A0A6J1F3G3 (tropinone reductase-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441791 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.1e-70
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIP+K GCILFT+SATTNIAGLS+HPY ASKCA+LGLVRNLAAELGQ
Sbjct: 125 MGAFWGAKHAARVMIPDKKGCILFTTSATTNIAGLSTHPYAASKCAVLGLVRNLAAELGQ 184

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGP DP QAEALE MVT WANLKG VLKADDIA+AALYLASD+
Sbjct: 185 HGIRVNCVAPFVVATGIAGPTDPKQAEALENMVTGWANLKGCVLKADDIARAALYLASDE 244

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNPSMLKTL+LMD
Sbjct: 245 ANYVSGLNLVVDGGYSVVNPSMLKTLKLMD 274

[Close]

BLAST of Lsi03G018560 vs. NCBI nr
Match: BAA89230.1 (wts2L [Citrullus lanatus])

HSP 1 Score: 285.4 bits (729), Expect = 2.8e-73
Identity = 141/150 (94.00%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIPEK+GCILFTSSATTNIAGLSSHPY ASKCA+LGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAARVMIPEKNGCILFTSSATTNIAGLSSHPYAASKCAVLGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAG RDP+QAEALETMVT+WANLKGRVLKADDIAKAALYLASDD
Sbjct: 184 HGIRVNCVAPFVVATGIAGSRDPMQAEALETMVTTWANLKGRVLKADDIAKAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNP+MLKTL+LMD
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPTMLKTLKLMD 273

[Close]

BLAST of Lsi03G018560 vs. NCBI nr
Match: XP_038906320.1 (tropinone reductase-like 1 [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 7.6e-71
Identity = 136/150 (90.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIPEK+GCILFTSS+TTNIAGLSSHPY  SKCA+LGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAARVMIPEKNGCILFTSSSTTNIAGLSSHPYAVSKCAVLGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPF+VATGIAGPR+ +QAEALET+VTSWANLKGRVLKA+DIAKAALYLASDD
Sbjct: 184 HGIRVNCVAPFIVATGIAGPRNLMQAEALETLVTSWANLKGRVLKANDIAKAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNPSMLKTL+ MD
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPSMLKTLKFMD 273

[Close]

BLAST of Lsi03G018560 vs. NCBI nr
Match: XP_008442887.1 (PREDICTED: tropinone reductase-like 1 [Cucumis melo] >KAA0043843.1 tropinone reductase-like 1 [Cucumis melo var. makuwa] >TYK25291.1 tropinone reductase-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVMIP+K+GCILFT+SATTNIAGLSSHPY +SKCA+LGLVRNL+AELGQ
Sbjct: 124 MGAFWGAKHAARVMIPQKNGCILFTTSATTNIAGLSSHPYASSKCAVLGLVRNLSAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGPR+P+QAEALETMVTSWANLKG VLKADDIA AALYLASDD
Sbjct: 184 HGIRVNCVAPFVVATGIAGPRNPMQAEALETMVTSWANLKGCVLKADDIANAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           A YVSGLNLVVDGGYSVVNPSMLKTL+ MD
Sbjct: 244 AKYVSGLNLVVDGGYSVVNPSMLKTLKFMD 273

[Close]

BLAST of Lsi03G018560 vs. NCBI nr
Match: XP_022983067.1 (tropinone reductase-like 1 [Cucurbita maxima])

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-70
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH ARVM+PEK GCILFT+SATTNIAGLS+HPY ASKCA+LGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAARVMVPEKKGCILFTTSATTNIAGLSTHPYAASKCAVLGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPFVVATGIAGP DP QAEALE MVT WANLKG VLKADDIA+AALYLASD+
Sbjct: 184 HGIRVNCVAPFVVATGIAGPTDPKQAEALENMVTGWANLKGCVLKADDIARAALYLASDE 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNLVVDGGYSVVNPSMLKTL+LMD
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPSMLKTLKLMD 273

[Close]

BLAST of Lsi03G018560 vs. NCBI nr
Match: XP_038876486.1 (tropinone reductase-like 1 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-70
Identity = 133/150 (88.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MGAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 60
           MGAFWGAKH A+VMIP+K+GCILFTSSATTNI+G+S+HPYTASKCAILGLVRNLAAELGQ
Sbjct: 124 MGAFWGAKHAAKVMIPQKNGCILFTSSATTNISGISTHPYTASKCAILGLVRNLAAELGQ 183

Query: 61  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 120
           HGIRVNCVAPF VATGIAGP DP+Q E +ETMVTSWANLKGRVLKADDIAKAALYLASDD
Sbjct: 184 HGIRVNCVAPFAVATGIAGPCDPMQEEMVETMVTSWANLKGRVLKADDIAKAALYLASDD 243

Query: 121 ANYVSGLNLVVDGGYSVVNPSMLKTLRLMD 151
           ANYVSGLNL+VDGG+SV+NPSMLKTL+LMD
Sbjct: 244 ANYVSGLNLMVDGGFSVINPSMLKTLKLMD 273

[Close]

BLAST of Lsi03G018560 vs. TAIR 10
Match: AT1G52340.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-32
Identity = 73/146 (50.00%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKSGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQH 61
           GAF   KH ARVMIPEK G I+   S    + G+  H Y  SK A+LGL R++AAELGQH
Sbjct: 135 GAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQH 194

Query: 62  GIRVNCVAPFVVATGIAGPRDPVQAEALETMV------TSWANLKGRVLKADDIAKAALY 121
           GIRVNCV+P+ VAT +A    P +    +  V       + ANLKG  L  DD+A A L+
Sbjct: 195 GIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLF 254

Query: 122 LASDDANYVSGLNLVVDGGYSVVNPS 142
           LASDD+ Y+SG NL++DGG++  N S
Sbjct: 255 LASDDSRYISGDNLMIDGGFTCTNHS 280

[Close]

BLAST of Lsi03G018560 vs. TAIR 10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEK-SGCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 61
           G   G KHGAR MI     GCI+ T+S    + G+  H YTASK AI+GL +N A ELG+
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGK 210

Query: 62  HGIRVNCVAPFVVATGI---------AGPRDPVQAEALETMVTSWANLKGRVLKADDIAK 121
           +GIRVNC++PF VAT +          G  +    E +E  V S ANLKG  L+A+DIA+
Sbjct: 211 YGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAE 270

Query: 122 AALYLASDDANYVSGLNLVVDGG 135
           AALYLASD++ YV+G NLVVDGG
Sbjct: 271 AALYLASDESKYVNGHNLVVDGG 293

[Close]

BLAST of Lsi03G018560 vs. TAIR 10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKS-GCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 61
           GA    KH AR M+   + G I+ T+S    I G   H YTASK A+LGL+R+  A LGQ
Sbjct: 156 GAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQ 215

Query: 62  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 121
           +GIRVN VAP+ VATG+    +    + LE    +  NLKG VLKA  IA+AAL+LASDD
Sbjct: 216 YGIRVNGVAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDD 275

Query: 122 ANYVSGLNLVVDGGYSVV 139
           + Y+SG NLVVDGG+SVV
Sbjct: 276 SVYISGQNLVVDGGFSVV 293

[Close]

BLAST of Lsi03G018560 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-29
Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKS-GCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 61
           GA    KH AR M+   + G I+ T+S    I G   H YTASK A+LGL+R+  A LGQ
Sbjct: 118 GAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQ 177

Query: 62  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 121
           +GIRVN VAP+ VATG+    +    + LE    +  NLKG VLKA  IA+AAL+LASDD
Sbjct: 178 YGIRVNGVAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDD 237

Query: 122 ANYVSGLNLVVDGGYSVV 139
           + Y+SG NLVVDGG+SVV
Sbjct: 238 SVYISGQNLVVDGGFSVV 255

[Close]

BLAST of Lsi03G018560 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.8e-28
Identity = 72/140 (51.43%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   GAFWGAKHGARVMIPEKS-GCILFTSSATTNIAGLSSHPYTASKCAILGLVRNLAAELGQ 61
           GA    KH AR M+ + + G I+ T+S  + I G   H YTASK A+LGLV++    LG+
Sbjct: 118 GAAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGK 177

Query: 62  HGIRVNCVAPFVVATGIAGPRDPVQAEALETMVTSWANLKGRVLKADDIAKAALYLASDD 121
           +GIRVN VAP+ VAT I   RD      +E    +   LKG VLKA  +A+AAL+LASDD
Sbjct: 178 YGIRVNGVAPYAVATAI-NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDD 237

Query: 122 ANYVSGLNLVVDGGYSVVNP 141
           + YVSG NL VDGGYSVV P
Sbjct: 238 SAYVSGQNLAVDGGYSVVKP 256

The following BLAST results are available for this feature:

BLAST of Lsi03G018560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
H9BFQ1	1.9e-40	55.10	Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1	[more]
H9BFQ0	3.3e-40	57.45	Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1	[more]
Q7FAE1	7.0e-35	55.63	Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 ...	[more]
A3F5F0	1.2e-34	53.06	Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH ...	[more]
Q94KL8	1.0e-33	51.02	Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 P...	[more]

BLAST of Lsi03G018560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9SBM0	1.4e-73	94.00	Wts2L OS=Citrullus lanatus OX=3654 GN=wts2L PE=2 SV=1	[more]
A0A5D3DNU4	1.4e-70	90.00	Tropinone reductase-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B6U4	1.4e-70	90.00	tropinone reductase-like 1 OS=Cucumis melo OX=3656 GN=LOC103486652 PE=4 SV=1	[more]
A0A6J1IY89	1.8e-70	90.00	tropinone reductase-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111481723 PE=4 SV=1	[more]
A0A6J1F3G3	3.1e-70	90.00	tropinone reductase-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441...	[more]

BLAST of Lsi03G018560 vs. NCBI nr


Match Name	E-value	Identity	Description
BAA89230.1	2.8e-73	94.00	wts2L [Citrullus lanatus]	[more]
XP_038906320.1	7.6e-71	90.67	tropinone reductase-like 1 [Benincasa hispida]	[more]
XP_008442887.1	2.9e-70	90.00	PREDICTED: tropinone reductase-like 1 [Cucumis melo] >KAA0043843.1 tropinone red...	[more]
XP_022983067.1	3.8e-70	90.00	tropinone reductase-like 1 [Cucurbita maxima]	[more]
XP_038876486.1	3.8e-70	88.67	tropinone reductase-like 1 [Benincasa hispida]	[more]

BLAST of Lsi03G018560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52340.1	1.5e-32	50.00	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G51680.1	1.7e-31	51.75	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.1	5.9e-29	52.90	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	5.9e-29	52.90	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	3.8e-28	51.43	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 61..78 score: 42.3 coord: 14..30 score: 26.01 coord: 40..59 score: 42.84 coord: 99..119 score: 33.77
None	No IPR available	PFAM	PF13561	adh_short_C2	coord: 2..136 e-value: 7.6E-32 score: 110.7
None	No IPR available	GENE3D	3.40.50.720		coord: 1..148 e-value: 1.6E-36 score: 127.7
None	No IPR available	PANTHER	PTHR43180	3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210)	coord: 1..145
None	No IPR available	PANTHER	PTHR43180:SF37	SECOISOLARICIRESINOL DEHYDROGENASE-LIKE	coord: 1..145
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018560.1	Lsi03G018560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity