Lsi03G018530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G018530
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase G
Locationchr03: 29983234 .. 29987357 (-)
RNA-Seq ExpressionLsi03G018530
SyntenyLsi03G018530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAATTAACCTTGGAAATGATACTCGTTGATAATGGTGGACACGTGCGAGGCTTACTGTCGCTCAACTCGGCCGAATTCGACCCAATTCACGAGCTTCAGCTCGAAGAAATCCGACTCCAACTAAACTGAGATGCGCTGTTCGATCAGTGGGTTTCGTTTATGATTCCAACTCTCCCAATATTTCTTGCAGATTTCTGTTTTTGTTATATTTCATCCTTTTCCCATTTTTGGGTTTCGATATTTTTGAGGGATTGCTGTTCTCAGCTTTTCTCAGTGGTTTACATTAGTGGATGGTAATTTCGGTGAAGATTTCTGCTCGATTTTCTGGGTTTTCTGTGGATTCTCAGGTTGTGTTTGGAAGGTGAGAAAATTTTGGGAATAGGTTAGAAATTGTCAAATACTCTTTTTTTGTTTGTCTTAGTTTTCGTTGTGTTGAATTATAATTCTCTAGGAAAAGAGAGGGGAAATGGAATTCTGCTAGGGTAAACACTTGAAACCATTCTGGAGCTTTCAAGTTTTGTGTATCTGTTGAATTTACGTCTTGAATGTTGGGGAAAAAACCAACCCTCTTTACTTTGACGAAGAACATTGCGGAAGTTAATCTGAGTTGTTTCTTGTAGATCTATTAGGAATCAAATTGAGCTTGATTATGTTCTCTCCTTATTTAACTGTAACTTGATTTTAGCTATTCAAGTCTATATTCCACTCTTGTTTCTAGTTTTTTTTTTTTCTTCTTCTTCTTTTTTTTTTAAAAGAATGTATCAAGTAAGTTAGTTTATTTGACTTATAATTATCGAGTTATATTGATGCATAGTCTGTATATGCAGCTATTGGGTAGGACTGGTAACTTGATTGCTTTTTGGAAAACATAAAACTTGGTTGTACTAATGTCAAGACCTTGGGTTCTTGTCTGTCTGCTGTTACTGATCGTCTTCTCCTCACAATTTGAGTGGAGGCAACAGTATGAGAACGAGCTTGAAGCAGGTCCAAACGCTTCACAGAGAGAACCCCATATGTCTGAAAGAGAGGAAGCTGTAAAAGAAAAGGTGAAATTCCATTTATCTATCTCCTTTTCTCATTAGTTTGCCAGAGCACTTGTATGTTTTAGGCGTTTAATTTTTTCAATGATTAGATGTTCAATTGTTGTTGCTATTGTCATTATAGGAAACAATATATGCATTTTATGAATCCTCAGGAATTGCTCTCTAGGGTTTATAAAAACACCCCACACTTGAGATACATCTAAAAGTTAGGAAATTTTGAGGGTTAGACTAGGGAGAGTTCCCTGTCTGGCTGTCTCTCAAAGTGCTAGGGTGTTCTTTGTGTGTGATTTTGCTGTCTTGAGATAGTGAATGTGACTGATGGGTAATCTAAGATCTATCAGTTTTATCAATGGAACGCCATTTAGAGGCTATATGATATGCTAGACCGCAAGATTCACTAGAATGATATTCAAAGATTCCTTTTCGACCATAAGGACAAATAGAGAGCTTTTCAAGCATAGTTCCTAAGGACTTGGCTTTACCTTGAGGGAAAATACAAACAATCTTGAATGAAATTCCAGATGTTCGGCTTGCATCATCAACAAATACCCAATATCTCGAGAAGTAGATTGCTTGGTTGTACGAACAATGCATGAAAAAAAAATAGCCGATGTTTTCTTCTGCATTTATATGGTCGACACAAGAAGTTGGAGAAAATGCAGCACGTGAATTTCTTTTTTTGATTTTCTTATTAGTTTTGTTGCTCTTAAAAGCTTAGAGAAAATCTGAACCTCCTTCAGAATGAGATCCTTCCATGAAACCTTAGAGGTGTGTATATGGGACATCCTACCAGAAGTGTTGAAACCATGATGTAGTGATTTACACCAGAAAATGCATAAATTTTCACATCATTTGCGCCTATATCACTGTTATGAGTAAGCACGGTACTATCTGAAATAGAAAACAGAGGATAGCTAATCTTCAAACTCCCTCTCTATAAAGGGTTTCCTGCATTTGAATCATAAAAAAATTAGAGGCCTCGTTGCAATGCTTGATAGCACAAGTCAAGGAAATTTTTGTAGTTCTCTATGTTAAAATTTGTTGGACCAAATGTAGATCGTTGTTATGCCGTGGAAGAACCACAACCTTGAAAGCAAAACTCAGCGCGATCTTGGTGCTAAATCGCTAATTGTCAGTTGCCCCCCAAGATTAACACGACCTTCTATCTTAGACGTGCACTTGTCGGAGAAGGATTGGAATCACAAAGGAATAGCTTGCTCAGAGCAGAAAAAAGATGAAGAAGAAGATAATTCATCAGATCTGAAATGTTGCCCAATATATGAGAAAAACAGAGAAGAAAACGTACAGATCTAAAAAGAAAAAACATGCGAGCGTGATTACCCGAACTAACAGATGGCGGCAGCGACACACACATGTGAGGAAAGATTCTACTGCCACTACACCCACATTTTGCAACCTCACTAGGAAGCTTTAGTATGTATACCCTTCACCCAAAACAAAATCTTTCCATGTGGGACAGACACTTTTCTAAAGTATTTTTCCAATGGGCCAAAAGCTCAAGTCATTTCTAACAAAATTCTCATCAGTCTCATGTGCCAACCATTTGATCGTATTTCCTTGTATAGTGTGGGAGTGTGCTTATTTCTTCTTGCTGGTTGCACCAATCCTCTACAACATTAACTTAGGTGTCCCTTCAATTCTATCAGTAGCCAGGTACACTCGTTCTTTCACACGTTTTCTTACCGAGAAAGTAGAACTGTATCTAACCTGTAACCTCTCCACACCAAAAGACTATTATGTTGTTTCTGCTTCTTTTAAAGCTCATGTCCATCTTATATGATCCAGAAGATGGCAGTATTGCATGAAATACATAGCCTGTAGACTCTATAGCCAGTCATCTGACATCGCTAACTTGTCAAAGTTCTCGTTGTTTCAATTCTTGTGAAATGCATCAACGATCATTGGTTGATCTTCTAAATCAAGAGGGCAAACTGTAAACCTGGATGCTTTTTACGGTTCAAATCATGGTCATCTAATATTAAATATCTTTGGAAGTTAAATGGCATCAGTTGTCTTAGGACTTAGTTTGTTGTCATATGGGCTAGTCCGGGGCCTGAAATGTGTTTTTCTTTCAAAATGTTTTTAGGCAACTTGGCATGCTGATACCTTTTCTTCTAATACTATTAGTATTGAAGTTAGCTTACACATGCATAAATCAACTAATCTCGCCTTATCCTTCAATCAGAGGAAGAATGATGCAGCGATCTTAATTAAGGCACTTACAGCAAGTATGCTACATCGTTTTATTTCTAAAGTTAATTCTCTGAAGTTTCAGTTTCCTAGTTGCACCGGGCCAAGCAAATTGACGACCTCATGAATGTTTGACAAATTCTACCTATTTTACTCTTTTACTTCCGTTTCTTGTTTCTTTTCTCCATTTTATTCATGATCCACTGTTCAATATCTTCTCTTTTGCGATTGCTCTAGTAGAATCTAAGTCGAGAGGATGACAAATTGACAATAGTCTTCTTGGTTTCTTATATGATTTGTAAATATAATACTAAGATTATTTCAATGCTATTGTAGATTATCCTTTCCCAGGAGAAAAATATCCAGAGATTGAATGAGCTGGTGCGGAGTCTTAGAAGACAGTTACTCCAGTGCAAGGGCGAACACGAGACCATGAATAGCACGGTGACGCCCATGGCTGAACTTCTAACAGTGTTTGACCAGCAGCCGATGCTAGATGATTAGGTCACATGGAACTGAACGCCACGTTTGTTGTTTGCAAGCTCTGTTTCTGTTCAGTAATCAGTAATCAGTAATCTAGCTTCATGATGGGGTTGAGTCTGAATCAATATTACATTTTGATAGGACTTAACTGTAGATGTAGAACATTGTCTCCCTGTTCAACTCTATCCATCACTGATAACTATACATCAAATCTAAGCTCTATTATAAGTCATTGTAGATGCTACTGTGAATTCCTTCCCTGTTCTAGTTTTTTATCTGTGACGAGCCGGGGCCGCCACCGCGTAATGGTGGGCTGCTAGAGAAAGAACTTGAATTTCAAACACAAAATTTGAAATAATGGCATTCAAAGTCGAATTATTGAAA

mRNA sequence

AAAGAATTAACCTTGGAAATGATACTCGTTGATAATGGTGGACACGTGCGAGGCTTACTGTCGCTCAACTCGGCCGAATTCGACCCAATTCACGAGCTTCAGCTCGAAGAAATCCGACTCCAACTAAACTGAGATGCGCTGTTCGATCAGTGGGTTTCGTTTATGATTCCAACTCTCCCAATATTTCTTGCAGATTTCTGTTTTTGTTATATTTCATCCTTTTCCCATTTTTGGGTTTCGATATTTTTGAGGGATTGCTGTTCTCAGCTTTTCTCAGTGGTTTACATTAGTGGATGGTAATTTCGGTGAAGATTTCTGCTCGATTTTCTGGGTTTTCTGTGGATTCTCAGGTTGTGTTTGGAAGACCTTGGGTTCTTGTCTGTCTGCTGTTACTGATCGTCTTCTCCTCACAATTTGAGTGGAGGCAACAGTATGAGAACGAGCTTGAAGCAGGTCCAAACGCTTCACAGAGAGAACCCCATATGTCTGAAAGAGAGGAAGCTGTAAAAGAAAAGATTATCCTTTCCCAGGAGAAAAATATCCAGAGATTGAATGAGCTGGTGCGGAGTCTTAGAAGACAGTTACTCCAGTGCAAGGGCGAACACGAGACCATGAATAGCACGGTGACGCCCATGGCTGAACTTCTAACAGTGTTTGACCAGCAGCCGATGCTAGATGATTAGGTCACATGGAACTGAACGCCACGTTTGTTGTTTGCAAGCTCTGTTTCTGTTCAGTAATCAGTAATCAGTAATCTAGCTTCATGATGGGGTTGAGTCTGAATCAATATTACATTTTGATAGGACTTAACTGTAGATGTAGAACATTGTCTCCCTGTTCAACTCTATCCATCACTGATAACTATACATCAAATCTAAGCTCTATTATAAGTCATTGTAGATGCTACTGTGAATTCCTTCCCTGTTCTAGTTTTTTATCTGTGACGAGCCGGGGCCGCCACCGCGTAATGGTGGGCTGCTAGAGAAAGAACTTGAATTTCAAACACAAAATTTGAAATAATGGCATTCAAAGTCGAATTATTGAAA

Coding sequence (CDS)

ATGGTAATTTCGGTGAAGATTTCTGCTCGATTTTCTGGGTTTTCTGTGGATTCTCAGGTTGTGTTTGGAAGACCTTGGGTTCTTGTCTGTCTGCTGTTACTGATCGTCTTCTCCTCACAATTTGAGTGGAGGCAACAGTATGAGAACGAGCTTGAAGCAGGTCCAAACGCTTCACAGAGAGAACCCCATATGTCTGAAAGAGAGGAAGCTGTAAAAGAAAAGATTATCCTTTCCCAGGAGAAAAATATCCAGAGATTGAATGAGCTGGTGCGGAGTCTTAGAAGACAGTTACTCCAGTGCAAGGGCGAACACGAGACCATGAATAGCACGGTGACGCCCATGGCTGAACTTCTAACAGTGTTTGACCAGCAGCCGATGCTAGATGATTAG

Protein sequence

MVISVKISARFSGFSVDSQVVFGRPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNIQRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD
Homology
[Close]
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match: A0A5D3DP23 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004310 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREP +SEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPLISEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           QRLNELV+SLRRQLLQCKGEHE +NSTV PM ELLTVFDQQPMLDD
Sbjct: 63  QRLNELVQSLRRQLLQCKGEHEAVNSTVKPMTELLTVFDQQPMLDD 108

[Close]
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match: A0A1S3B7I0 (uncharacterized protein LOC103486653 OS=Cucumis melo OX=3656 GN=LOC103486653 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREP +SEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPLISEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           QRLNELV+SLRRQLLQCKGEHE +NSTV PM ELLTVFDQQPMLDD
Sbjct: 63  QRLNELVQSLRRQLLQCKGEHEAVNSTVKPMTELLTVFDQQPMLDD 108

[Close]
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match: A0A6J1CT86 (uncharacterized protein LOC111014372 OS=Momordica charantia OX=3673 GN=LOC111014372 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 0 

Query: 21  VFGRPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQE 80
           +  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREP +SEREEAVKEKIILSQE
Sbjct: 1   MMSRPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPQISEREEAVKEKIILSQE 60

Query: 81  KNIQRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           KNI+RLNELV  LRRQLLQC+GEHE +N TVTPM ELLTV DQQPML+D
Sbjct: 61  KNIRRLNELVHKLRRQLLQCRGEHEAVNGTVTPMTELLTVLDQQPMLED 109

[Close]
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match: A0A6J1L1D0 (uncharacterized protein LOC111498265 OS=Cucurbita maxima OX=3661 GN=LOC111498265 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.1e-42
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNA+Q EPH+S+REEAVKEKIILSQE+NI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNATQSEPHVSDREEAVKEKIILSQERNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           +RLNELV+SLR QLLQC+GEHE  NS VTPM ELLTV DQQP+LDD
Sbjct: 63  RRLNELVQSLRTQLLQCRGEHEAENSMVTPMTELLTVLDQQPLLDD 108

[Close]
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match: A0A6J1F1Y7 (uncharacterized protein LOC111441421 OS=Cucurbita moschata OX=3662 GN=LOC111441421 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQ EPHMSEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQTEPHMSEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKG-EHETMNSTVTPMAELLTVFDQQPMLDD 130
           +RLNE+V+SLRR+L++C+G EHE +NSTV PM ELLTVF+Q P+LDD
Sbjct: 63  RRLNEVVQSLRRELVECRGEEHEAVNSTVRPMTELLTVFNQHPILDD 109

[Close]
BLAST of Lsi03G018530 vs. NCBI nr
Match: XP_038906290.1 (uncharacterized protein LOC120092148 [Benincasa hispida] >XP_038906291.1 uncharacterized protein LOC120092148 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 1.0e-47
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           QRLNELV+SLRRQLLQCKGEHE +NSTVTPM ELLTVFDQQPMLDD
Sbjct: 63  QRLNELVQSLRRQLLQCKGEHEAVNSTVTPMTELLTVFDQQPMLDD 108

[Close]
BLAST of Lsi03G018530 vs. NCBI nr
Match: XP_011652024.1 (uncharacterized protein LOC101204593 isoform X3 [Cucumis sativus] >XP_031738221.1 uncharacterized protein LOC101204593 isoform X3 [Cucumis sativus] >KAE8651101.1 hypothetical protein Csa_001655 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 1.9e-46
Identity = 99/106 (93.40%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLI+FSSQFEWRQQYENELEAGPNASQREPH+SEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIIFSSQFEWRQQYENELEAGPNASQREPHISEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           QRLNELV+SLRRQLLQCKGEHE +NSTV PM ELLTVFDQQPMLDD
Sbjct: 63  QRLNELVQSLRRQLLQCKGEHEAVNSTVKPMTELLTVFDQQPMLDD 108

[Close]
BLAST of Lsi03G018530 vs. NCBI nr
Match: XP_008442889.1 (PREDICTED: uncharacterized protein LOC103486653 [Cucumis melo] >KAA0043839.1 uncharacterized protein E6C27_scaffold236G001740 [Cucumis melo var. makuwa] >TYK25295.1 uncharacterized protein E5676_scaffold352G004310 [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 2.8e-45
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREP +SEREEAVKEKIILSQEKNI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPLISEREEAVKEKIILSQEKNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           QRLNELV+SLRRQLLQCKGEHE +NSTV PM ELLTVFDQQPMLDD
Sbjct: 63  QRLNELVQSLRRQLLQCKGEHEAVNSTVKPMTELLTVFDQQPMLDD 108

[Close]
BLAST of Lsi03G018530 vs. NCBI nr
Match: XP_022144759.1 (uncharacterized protein LOC111014372 [Momordica charantia] >XP_022144760.1 uncharacterized protein LOC111014372 [Momordica charantia] >XP_022144761.1 uncharacterized protein LOC111014372 [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43
Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 0 

Query: 21  VFGRPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQE 80
           +  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREP +SEREEAVKEKIILSQE
Sbjct: 1   MMSRPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPQISEREEAVKEKIILSQE 60

Query: 81  KNIQRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           KNI+RLNELV  LRRQLLQC+GEHE +N TVTPM ELLTV DQQPML+D
Sbjct: 61  KNIRRLNELVHKLRRQLLQCRGEHEAVNGTVTPMTELLTVLDQQPMLED 109

[Close]
BLAST of Lsi03G018530 vs. NCBI nr
Match: XP_023005135.1 (uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005136.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005137.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005138.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005139.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005140.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005141.1 uncharacterized protein LOC111498265 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 6.4e-42
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNA+Q EPH+S+REEAVKEKIILSQE+NI
Sbjct: 3   RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNATQSEPHVSDREEAVKEKIILSQERNI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQQPMLDD 130
           +RLNELV+SLR QLLQC+GEHE  NS VTPM ELLTV DQQP+LDD
Sbjct: 63  RRLNELVQSLRTQLLQCRGEHEAENSMVTPMTELLTVLDQQPLLDD 108

[Close]
BLAST of Lsi03G018530 vs. TAIR 10
Match: AT3G44280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-23
Identity = 54/87 (62.07%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           +P +LVCLL++++ +SQFEWRQ    EL+   ++SQ++  +S+REEAVKEKII+SQE++I
Sbjct: 3   KPVLLVCLLVILIVTSQFEWRQPLV-ELDTATSSSQKQQQISDREEAVKEKIIISQERHI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNST 111
           QRLNELVRSL+ QLLQCKGE+ET N+T
Sbjct: 63  QRLNELVRSLQLQLLQCKGENETQNAT 88

[Close]
BLAST of Lsi03G018530 vs. TAIR 10
Match: AT5G22280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 54/89 (60.67%), Postives = 73/89 (82.02%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNI 83
           RP +LV LL++++ +SQFEWRQ    EL+A P+ SQ+   +++REEAVKEKIILSQE++I
Sbjct: 3   RPIMLVFLLVILIVTSQFEWRQPL-LELDAAPSLSQKHQQIAKREEAVKEKIILSQERHI 62

Query: 84  QRLNELVRSLRRQLLQCKGEHETMNSTVT 113
           QRLN+LVRSL+ QL +CKGE+ET N+T T
Sbjct: 63  QRLNDLVRSLQMQLQRCKGENETRNATET 90

[Close]
BLAST of Lsi03G018530 vs. TAIR 10
Match: AT5G22280.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 36  VFSSQFEWRQQYENELEAGPNASQREPHMSEREEAVKEKIILSQEKNIQRLNELVRSLRR 95
           V +  FEWRQ    EL+A P+ SQ+   +++REEAVKEKIILSQE++IQRLN+LVRSL+ 
Sbjct: 7   VINRSFEWRQPL-LELDAAPSLSQKHQQIAKREEAVKEKIILSQERHIQRLNDLVRSLQM 66

Query: 96  QLLQCKGEHETMNSTVT 113
           QL +CKGE+ET N+T T
Sbjct: 67  QLQRCKGENETRNATET 82

[Close]
BLAST of Lsi03G018530 vs. TAIR 10
Match: AT5G06265.1 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 80.9 bits (198), Expect = 8.4e-16
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPN----ASQREPHMSEREEAVKEKIILSQ 83
           R WVL+ +L+ IV +SQFEW +Q ENE E        + + + H+ + +E+V+ K IL Q
Sbjct: 3   RSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQ 62

Query: 84  EKNIQRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQ 124
           EK IQ+LNELVR LRRQLLQC+ E++        + EL T  DQ
Sbjct: 63  EKKIQKLNELVRDLRRQLLQCRNENQ------VELTELETELDQ 100

[Close]
BLAST of Lsi03G018530 vs. TAIR 10
Match: AT5G06265.2 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 80.9 bits (198), Expect = 8.4e-16
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 0 

Query: 24  RPWVLVCLLLLIVFSSQFEWRQQYENELEAGPN----ASQREPHMSEREEAVKEKIILSQ 83
           R WVL+ +L+ IV +SQFEW +Q ENE E        + + + H+ + +E+V+ K IL Q
Sbjct: 3   RSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKILFQ 62

Query: 84  EKNIQRLNELVRSLRRQLLQCKGEHETMNSTVTPMAELLTVFDQ 124
           EK IQ+LNELVR LRRQLLQC+ E++        + EL T  DQ
Sbjct: 63  EKKIQKLNELVRDLRRQLLQCRNENQ------VELTELETELDQ 100

The following BLAST results are available for this feature:
BLAST of Lsi03G018530 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi03G018530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DP231.3e-4593.40Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B7I01.3e-4593.40uncharacterized protein LOC103486653 OS=Cucumis melo OX=3656 GN=LOC103486653 PE=... [more]
A0A6J1CT861.3e-4386.24uncharacterized protein LOC111014372 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1L1D03.1e-4285.85uncharacterized protein LOC111498265 OS=Cucurbita maxima OX=3661 GN=LOC111498265... [more]
A0A6J1F1Y72.0e-4185.05uncharacterized protein LOC111441421 OS=Cucurbita moschata OX=3662 GN=LOC1114414... [more]
BLAST of Lsi03G018530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906290.11.0e-4796.23uncharacterized protein LOC120092148 [Benincasa hispida] >XP_038906291.1 unchara... [more]
XP_011652024.11.9e-4693.40uncharacterized protein LOC101204593 isoform X3 [Cucumis sativus] >XP_031738221.... [more]
XP_008442889.12.8e-4593.40PREDICTED: uncharacterized protein LOC103486653 [Cucumis melo] >KAA0043839.1 unc... [more]
XP_022144759.12.6e-4386.24uncharacterized protein LOC111014372 [Momordica charantia] >XP_022144760.1 uncha... [more]
XP_023005135.16.4e-4285.85uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005136.1 uncharac... [more]
BLAST of Lsi03G018530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G44280.19.3e-2362.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22280.12.3e-2160.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22280.23.4e-1761.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G06265.18.4e-1646.15hyaluronan mediated motility receptor-related [more]
AT5G06265.28.4e-1646.15hyaluronan mediated motility receptor-related [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availablePANTHERPTHR34564PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Gcoord: 22..129
NoneNo IPR availablePANTHERPTHR34564:SF10HYALURONAN MEDIATED MOTILITY RECEPTOR-LIKE PROTEINcoord: 22..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G018530.1Lsi03G018530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016853 isomerase activity