Lsi03G018490 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Transcription repressor
Location	chr03: 29928270 .. 29928782 (+)
RNA-Seq Expression	Lsi03G018490
Synteny	Lsi03G018490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGTAAAAAGAAAGCTCCTCCTCAACACAATCTCCGTCGACATTGGTTGCAGCAGTTGTCGAAAGCCCAAATCCATCATCTCACAGATCTTCCGCCCCAAGCCCAAGTCCCCAACCCCCTATTCTGACCGCCGCCTCTTCCGGTCATCATCCAGCTCGTCGGAGAAGAAGCTGAGCGATGCCAACATGGCCTACCCCCCTGAGGTTGTCGGAGGCGGTTTCTGGAAGATCGGCGGCGTGAGCGTGGCGGTGGAGAAGGATTCTAACGATCCGTATGTGGATTTCCGGCAGTCGATGCTGCAGATGATTTTGGAGAACGAAATTTACACTCAGGAAGGGCTTCGGGAGCTTCTGAGCTGTTTTCTTCATCTTAATTCGCCTTGCAACCATGGGATTATAATTCGAGCTTTTGCCGAGATCTGGGATGGTGTGTTGTGTGCCAGATCGGCGGTTCCCACGACGGCGCCTGCTAAACAAAGACGCCCTGTACGGTCACGCGCCTTCTAA

mRNA sequence

ATGGCCGCCGTAAAAAGAAAGCTCCTCCTCAACACAATCTCCGTCGACATTGGTTGCAGCAGTTGTCGAAAGCCCAAATCCATCATCTCACAGATCTTCCGCCCCAAGCCCAAGTCCCCAACCCCCTATTCTGACCGCCGCCTCTTCCGGTCATCATCCAGCTCGTCGGAGAAGAAGCTGAGCGATGCCAACATGGCCTACCCCCCTGAGGTTGTCGGAGGCGGTTTCTGGAAGATCGGCGGCGTGAGCGTGGCGGTGGAGAAGGATTCTAACGATCCGTATGTGGATTTCCGGCAGTCGATGCTGCAGATGATTTTGGAGAACGAAATTTACACTCAGGAAGGGCTTCGGGAGCTTCTGAGCTGTTTTCTTCATCTTAATTCGCCTTGCAACCATGGGATTATAATTCGAGCTTTTGCCGAGATCTGGGATGGTGTGTTGTGTGCCAGATCGGCGGTTCCCACGACGGCGCCTGCTAAACAAAGACGCCCTGTACGGTCACGCGCCTTCTAA

Coding sequence (CDS)

ATGGCCGCCGTAAAAAGAAAGCTCCTCCTCAACACAATCTCCGTCGACATTGGTTGCAGCAGTTGTCGAAAGCCCAAATCCATCATCTCACAGATCTTCCGCCCCAAGCCCAAGTCCCCAACCCCCTATTCTGACCGCCGCCTCTTCCGGTCATCATCCAGCTCGTCGGAGAAGAAGCTGAGCGATGCCAACATGGCCTACCCCCCTGAGGTTGTCGGAGGCGGTTTCTGGAAGATCGGCGGCGTGAGCGTGGCGGTGGAGAAGGATTCTAACGATCCGTATGTGGATTTCCGGCAGTCGATGCTGCAGATGATTTTGGAGAACGAAATTTACACTCAGGAAGGGCTTCGGGAGCTTCTGAGCTGTTTTCTTCATCTTAATTCGCCTTGCAACCATGGGATTATAATTCGAGCTTTTGCCGAGATCTGGGATGGTGTGTTGTGTGCCAGATCGGCGGTTCCCACGACGGCGCCTGCTAAACAAAGACGCCCTGTACGGTCACGCGCCTTCTAA

Protein sequence

MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKLSDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF

Homology

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BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot
Match: Q3EAL1 (Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.0e-27
Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 1   MAAVKRKLLLNTIS-VDIGCSSCRKPK-SIISQIFRPKPKSPTPYSDRRLFRSSSSSSEK 60
           MA   +K +L T+S VDI C +C KP  + I   F  KPK P+         S+      
Sbjct: 1   MATKSKKKILKTVSVVDISCGNCIKPTFASIFNFFSKKPKRPS---------STYRHCHS 60

Query: 61  KLSDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRE 120
            +S A  +  P         +   SVAVEKDS+DPY+DFRQSMLQMILEN+IY+++ LRE
Sbjct: 61  SISSATPSSTP---------LATASVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRE 120

Query: 121 LLSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRS 168
           LL CFL LNS  +HGII+RAF+EIW+ V  A ++    +P   R   R+
Sbjct: 121 LLQCFLSLNSHYHHGIIVRAFSEIWEDVSSAAASAVEASPLITRHVSRA 151

[Close]

BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot
Match: Q94CV1 (Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 78  KIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIR 137
           ++   SVAV  +S +PY DFR+SM+QM++E EIY  + L +LL  FL LNSP +H +I+ 
Sbjct: 149 RVAKESVAVAVESAEPYEDFRESMVQMVVEKEIYAWDDLNDLLHQFLSLNSPRHHPLILH 208

Query: 138 AFAEIW 144
           AFA++W
Sbjct: 209 AFADLW 214

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BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot
Match: Q9ZU65 (Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-11
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 23  RKPKSIISQ--IFRPKPKSPTPYSDRRLFRSSSSSSEKKLSDANMAYPPEVVGGGFWKIG 82
           R+P+ ++ +  I      S  P S  RL     SS  ++L    MA    V G       
Sbjct: 180 RRPRQLLKKAVIEEESESSSPPPSPARL-----SSFVQRLMPCTMAAAVMVEG------- 239

Query: 83  GVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFA 142
              VAV K S DPY DF+ SM++MI+E +++    L +LLSCFL LN+  +H  I+RAF+
Sbjct: 240 ---VAVVKKSEDPYEDFKGSMMEMIVEKKMFEVAELEQLLSCFLSLNAKRHHRAIVRAFS 287

Query: 143 EIW 144
           EIW
Sbjct: 300 EIW 287

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BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot
Match: Q3E9B4 (Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-10
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 83  SVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFAEI 142
           S AV K S DPY DFR SM++MI+E +I+    L++LL CFL LNS  +H +I++ F EI
Sbjct: 155 SFAVVKKSKDPYEDFRTSMVEMIVERQIFAPAELQQLLQCFLSLNSRQHHKVIVQVFLEI 214

Query: 143 W 144
           +
Sbjct: 215 Y 215

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BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot
Match: Q9LVL4 (Transcription repressor OFP3 OS=Arabidopsis thaliana OX=3702 GN=OFP3 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.4e-09
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 83  SVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFAEI 142
           S A+   S DP  DFR+SM++MI+EN++  Q+ L +LL+C+L LNS   H +II+AF   
Sbjct: 225 SFAIVLSSVDPEKDFRESMVEMIMENKMREQKDLEDLLACYLSLNSSEYHDVIIKAFENT 284

Query: 143 W 144
           W
Sbjct: 285 W 285

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BLAST of Lsi03G018490 vs. ExPASy TrEMBL
Match: A0A5D3DNX5 (Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004340 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 155/171 (90.64%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLL+NTISVDIGC SCRK KSIISQIFRPKPKSPT YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLINTISVDIGCGSCRKSKSIISQIFRPKPKSPTSYSDRRLFRSLSSSSEKKL 60

Query: 61  SDANMAYPPEVV-GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120
           SD++MAY PEVV GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL
Sbjct: 61  SDSDMAYAPEVVGGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120

Query: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           LSCFLHLNSPCNHGIIIRAFAEIWDGV CARSA    APAKQRR VRSRAF
Sbjct: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVFCARSA----APAKQRRHVRSRAF 167

[Close]

BLAST of Lsi03G018490 vs. ExPASy TrEMBL
Match: A0A1S3B7I6 (Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103486658 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 155/171 (90.64%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLL+NTISVDIGC SCRK KSIISQIFRPKPKSPT YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLINTISVDIGCGSCRKSKSIISQIFRPKPKSPTSYSDRRLFRSLSSSSEKKL 60

Query: 61  SDANMAYPPEVV-GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120
           SD++MAY PEVV GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL
Sbjct: 61  SDSDMAYAPEVVGGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120

Query: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           LSCFLHLNSPCNHGIIIRAFAEIWDGV CARSA    APAKQRR VRSRAF
Sbjct: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVFCARSA----APAKQRRHVRSRAF 167

[Close]

BLAST of Lsi03G018490 vs. ExPASy TrEMBL
Match: A0A0A0LGR4 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_3G778370 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76
Identity = 152/171 (88.89%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLL+NTISVDIGC SCR PKSIISQIFRPKPKSP+ YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLINTISVDIGCGSCRNPKSIISQIFRPKPKSPSSYSDRRLFRSLSSSSEKKL 60

Query: 61  SDANMAYPPEVV-GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120
           SD++MAY PEVV GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL
Sbjct: 61  SDSDMAYAPEVVGGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120

Query: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           LSCFLHLNSPCNHGIIIRAFAEIWD V CARSA    APA+QRR VRSRAF
Sbjct: 121 LSCFLHLNSPCNHGIIIRAFAEIWDSVFCARSA----APARQRRHVRSRAF 167

[Close]

BLAST of Lsi03G018490 vs. ExPASy TrEMBL
Match: A0A6J1J181 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111481764 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLLLNTISVDIGCSSCRKPKSI+SQIFR KPKS  P SDRRLFRS SS SEKKL
Sbjct: 1   MAAVKKKLLLNTISVDIGCSSCRKPKSILSQIFRSKPKSRAPNSDRRLFRSPSSLSEKKL 60

Query: 61  SDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120
           SD +M Y PE+VGGGFWKIG  SVAVEKDSN PY+DFR SMLQMILENEIY+QEGLRELL
Sbjct: 61  SDVDMGYSPEIVGGGFWKIGSASVAVEKDSNIPYMDFRHSMLQMILENEIYSQEGLRELL 120

Query: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           SCFLHLNSPCNHGIIIRAFAEIWDGV  AR+A PT APAKQRRPVRSRAF
Sbjct: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVFSARAAAPTAAPAKQRRPVRSRAF 170

[Close]

BLAST of Lsi03G018490 vs. ExPASy TrEMBL
Match: A0A6J1F4Y5 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111442161 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLLL+TISVDIGCSSCRKPKSI+SQIFR KPKS TP SDRRLFRS SS SEKKL
Sbjct: 1   MAAVKKKLLLSTISVDIGCSSCRKPKSILSQIFRSKPKSRTPNSDRRLFRSPSSLSEKKL 60

Query: 61  SDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120
           SD +M Y PE+VGGGFWKIG  SVAVEKDSN PYVDFR SMLQMILENEIY+QEGLRELL
Sbjct: 61  SDVDMGYSPEIVGGGFWKIGSASVAVEKDSNVPYVDFRHSMLQMILENEIYSQEGLRELL 120

Query: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           SCFLHLNSPCNHGIIIRAFAEIWDGV  AR+A PT APAKQRR VRSRAF
Sbjct: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVFSARAAAPTAAPAKQRRLVRSRAF 170

[Close]

BLAST of Lsi03G018490 vs. NCBI nr
Match: XP_038905537.1 (transcription repressor OFP6-like [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 156/170 (91.76%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+K LLNTISVDIGCSSCR PK+IISQIFRPKPKSPT YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKK-LLNTISVDIGCSSCRNPKTIISQIFRPKPKSPTSYSDRRLFRSPSSSSEKKL 60

Query: 61  SDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120
           SD++MAY PEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL
Sbjct: 61  SDSDMAYAPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120

Query: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           SCFLHLNSPCNHGIIIRAFAEIWDGV CA+SAVPT A AKQRR VRSRAF
Sbjct: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVFCAKSAVPTAALAKQRRHVRSRAF 169

[Close]

BLAST of Lsi03G018490 vs. NCBI nr
Match: XP_008442895.2 (PREDICTED: transcription repressor OFP6-like [Cucumis melo] >KAA0043835.1 transcription repressor OFP6-like [Cucumis melo var. makuwa] >TYK25298.1 transcription repressor OFP6-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.7e-77
Identity = 155/171 (90.64%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLL+NTISVDIGC SCRK KSIISQIFRPKPKSPT YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLINTISVDIGCGSCRKSKSIISQIFRPKPKSPTSYSDRRLFRSLSSSSEKKL 60

Query: 61  SDANMAYPPEVV-GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120
           SD++MAY PEVV GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL
Sbjct: 61  SDSDMAYAPEVVGGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120

Query: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           LSCFLHLNSPCNHGIIIRAFAEIWDGV CARSA    APAKQRR VRSRAF
Sbjct: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVFCARSA----APAKQRRHVRSRAF 167

[Close]

BLAST of Lsi03G018490 vs. NCBI nr
Match: XP_004136704.1 (transcription repressor OFP6 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 6.8e-76
Identity = 152/171 (88.89%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLL+NTISVDIGC SCR PKSIISQIFRPKPKSP+ YSDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLINTISVDIGCGSCRNPKSIISQIFRPKPKSPSSYSDRRLFRSLSSSSEKKL 60

Query: 61  SDANMAYPPEVV-GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120
           SD++MAY PEVV GGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL
Sbjct: 61  SDSDMAYAPEVVGGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLREL 120

Query: 121 LSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           LSCFLHLNSPCNHGIIIRAFAEIWD V CARSA    APA+QRR VRSRAF
Sbjct: 121 LSCFLHLNSPCNHGIIIRAFAEIWDSVFCARSA----APARQRRHVRSRAF 167

[Close]

BLAST of Lsi03G018490 vs. NCBI nr
Match: KAG6580729.1 (Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-75
Identity = 148/170 (87.06%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLLLNTISVDIGCSSCRKPKSI+SQIFR KPKS TP SDRRLFRS SSSSEKKL
Sbjct: 1   MAAVKKKLLLNTISVDIGCSSCRKPKSILSQIFRSKPKSRTPNSDRRLFRSPSSSSEKKL 60

Query: 61  SDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120
           SD +M Y PE+VGGGFWKIG  SVAVEKDSN PYVDFR SMLQMILENEIY+QEGLRELL
Sbjct: 61  SDVDMDYSPEIVGGGFWKIGSASVAVEKDSNVPYVDFRHSMLQMILENEIYSQEGLRELL 120

Query: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           SCFLHLNSPCNHGIIIRAFAEIWDGV  AR+A PT APAKQRR VRSRAF
Sbjct: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVFSARAAAPTAAPAKQRRLVRSRAF 170

[Close]

BLAST of Lsi03G018490 vs. NCBI nr
Match: XP_022983121.1 (transcription repressor OFP6-like [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75
Identity = 146/170 (85.88%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MAAVKRKLLLNTISVDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKL 60
           MAAVK+KLLLNTISVDIGCSSCRKPKSI+SQIFR KPKS  P SDRRLFRS SS SEKKL
Sbjct: 1   MAAVKKKLLLNTISVDIGCSSCRKPKSILSQIFRSKPKSRAPNSDRRLFRSPSSLSEKKL 60

Query: 61  SDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELL 120
           SD +M Y PE+VGGGFWKIG  SVAVEKDSN PY+DFR SMLQMILENEIY+QEGLRELL
Sbjct: 61  SDVDMGYSPEIVGGGFWKIGSASVAVEKDSNIPYMDFRHSMLQMILENEIYSQEGLRELL 120

Query: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRSRAF 171
           SCFLHLNSPCNHGIIIRAFAEIWDGV  AR+A PT APAKQRRPVRSRAF
Sbjct: 121 SCFLHLNSPCNHGIIIRAFAEIWDGVFSARAAAPTAAPAKQRRPVRSRAF 170

[Close]

BLAST of Lsi03G018490 vs. TAIR 10
Match: AT2G36026.1 (Ovate family protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.2e-31
Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 5   KRKLLLNTIS-VDIGCSSCRKPKSIISQIFRPKPKSPTPYSDRRLFRSSSSSSEKKLSDA 64
           K+K++L  +S VDIGC +C+ P   +S  F P PK P  YS       SS+ +    S A
Sbjct: 8   KKKMVLKAVSVVDIGCGNCKFPS--LSSFFNPSPKKPRLYSSNYGHCHSSTPTTASSSSA 67

Query: 65  --NMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLS 124
             + ++               +VAVEKDS+DPY+DFRQSMLQMILENEIY++  LRELL 
Sbjct: 68  VPSTSHWFSDTSSSSATPSAAAVAVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLH 127

Query: 125 CFLHLNSPCNHGIIIRAFAEIWDGVLCA 150
           CFL LN P +HGIIIRAF+EIWDGV  A
Sbjct: 128 CFLSLNEPYHHGIIIRAFSEIWDGVFSA 153

[Close]

BLAST of Lsi03G018490 vs. TAIR 10
Match: AT3G52525.1 (ovate family protein 6 )

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-28
Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 0


Query: 1   MAAVKRKLLLNTIS-VDIGCSSCRKPK-SIISQIFRPKPKSPTPYSDRRLFRSSSSSSEK 60
           MA   +K +L T+S VDI C +C KP  + I   F  KPK P+         S+      
Sbjct: 1   MATKSKKKILKTVSVVDISCGNCIKPTFASIFNFFSKKPKRPS---------STYRHCHS 60

Query: 61  KLSDANMAYPPEVVGGGFWKIGGVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRE 120
            +S A  +  P         +   SVAVEKDS+DPY+DFRQSMLQMILEN+IY+++ LRE
Sbjct: 61  SISSATPSSTP---------LATASVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRE 120

Query: 121 LLSCFLHLNSPCNHGIIIRAFAEIWDGVLCARSAVPTTAPAKQRRPVRS 168
           LL CFL LNS  +HGII+RAF+EIW+ V  A ++    +P   R   R+
Sbjct: 121 LLQCFLSLNSHYHHGIIVRAFSEIWEDVSSAAASAVEASPLITRHVSRA 151

[Close]

BLAST of Lsi03G018490 vs. TAIR 10
Match: AT2G18500.1 (ovate family protein 7 )

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 23  RKPKSIISQ--IFRPKPKSPTPYSDRRLFRSSSSSSEKKLSDANMAYPPEVVGGGFWKIG 82
           R+P+ ++ +  I      S  P S  RL     SS  ++L    MA    V G       
Sbjct: 180 RRPRQLLKKAVIEEESESSSPPPSPARL-----SSFVQRLMPCTMAAAVMVEG------- 239

Query: 83  GVSVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFA 142
              VAV K S DPY DF+ SM++MI+E +++    L +LLSCFL LN+  +H  I+RAF+
Sbjct: 240 ---VAVVKKSEDPYEDFKGSMMEMIVEKKMFEVAELEQLLSCFLSLNAKRHHRAIVRAFS 287

Query: 143 EIW 144
           EIW
Sbjct: 300 EIW 287

[Close]

BLAST of Lsi03G018490 vs. TAIR 10
Match: AT5G19650.1 (ovate family protein 8 )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 83  SVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFAEI 142
           S AV K S DPY DFR SM++MI+E +I+    L++LL CFL LNS  +H +I++ F EI
Sbjct: 155 SFAVVKKSKDPYEDFRTSMVEMIVERQIFAPAELQQLLQCFLSLNSRQHHKVIVQVFLEI 214

Query: 143 W 144
           +
Sbjct: 215 Y 215

[Close]

BLAST of Lsi03G018490 vs. TAIR 10
Match: AT5G58360.1 (ovate family protein 3 )

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 83  SVAVEKDSNDPYVDFRQSMLQMILENEIYTQEGLRELLSCFLHLNSPCNHGIIIRAFAEI 142
           S A+   S DP  DFR+SM++MI+EN++  Q+ L +LL+C+L LNS   H +II+AF   
Sbjct: 225 SFAIVLSSVDPEKDFRESMVEMIMENKMREQKDLEDLLACYLSLNSSEYHDVIIKAFENT 284

Query: 143 W 144
           W
Sbjct: 285 W 285

The following BLAST results are available for this feature:

BLAST of Lsi03G018490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EAL1	8.0e-27	44.38	Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1	[more]
Q94CV1	3.3e-12	50.00	Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE...	[more]
Q9ZU65	2.8e-11	38.21	Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1	[more]
Q3E9B4	3.0e-10	50.82	Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1	[more]
Q9LVL4	4.4e-09	47.54	Transcription repressor OFP3 OS=Arabidopsis thaliana OX=3702 GN=OFP3 PE=1 SV=1	[more]

BLAST of Lsi03G018490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNX5	2.3e-77	90.64	Transcription repressor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7I6	2.3e-77	90.64	Transcription repressor OS=Cucumis melo OX=3656 GN=LOC103486658 PE=4 SV=1	[more]
A0A0A0LGR4	3.3e-76	88.89	Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_3G778370 PE=4 SV=1	[more]
A0A6J1J181	2.8e-75	85.88	Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111481764 PE=4 SV=1	[more]
A0A6J1F4Y5	1.8e-74	85.88	Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111442161 PE=4 SV=1	[more]

BLAST of Lsi03G018490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905537.1	1.7e-79	91.76	transcription repressor OFP6-like [Benincasa hispida]	[more]
XP_008442895.2	4.7e-77	90.64	PREDICTED: transcription repressor OFP6-like [Cucumis melo] >KAA0043835.1 transc...	[more]
XP_004136704.1	6.8e-76	88.89	transcription repressor OFP6 [Cucumis sativus]	[more]
KAG6580729.1	3.4e-75	87.06	Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983121.1	5.8e-75	85.88	transcription repressor OFP6-like [Cucurbita maxima]	[more]

BLAST of Lsi03G018490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36026.1	7.2e-31	50.68	Ovate family protein	[more]
AT3G52525.1	5.7e-28	44.38	ovate family protein 6	[more]
AT2G18500.1	2.0e-12	38.21	ovate family protein 7	[more]
AT5G19650.1	2.2e-11	50.82	ovate family protein 8	[more]
AT5G58360.1	3.1e-10	47.54	ovate family protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006458	Ovate protein family, C-terminal	TIGRFAM	TIGR01568	TIGR01568	coord: 84..143 e-value: 1.2E-20 score: 71.6
IPR006458	Ovate protein family, C-terminal	PFAM	PF04844	Ovate	coord: 90..144 e-value: 3.5E-22 score: 78.2
IPR006458	Ovate protein family, C-terminal	PROSITE	PS51754	OVATE	coord: 86..145 score: 17.778101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..56
None	No IPR available	PANTHER	PTHR33057:SF70	TRANSCRIPTION REPRESSOR OFP6	coord: 1..151
IPR038933	Ovate protein family	PANTHER	PTHR33057	TRANSCRIPTION REPRESSOR OFP7-RELATED	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018490.1	Lsi03G018490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus