Lsi03G018470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Early nodulin-20-like
Location	chr03: 29909548 .. 29910051 (+)
RNA-Seq Expression	Lsi03G018470
Synteny	Lsi03G018470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGACCTCCGCTCTAAAACCAAACCCACCTTCGAATCTCCGCCGCAGAAACTCCATCACGGTGCCCGTTGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGCAGCGGCATCGCCGACGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCCATCAGCTCCCCCACCGCTGCCTCTGCTGCAAATTCCGGGTACGAGATCTCGATCCGCAATCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTCAGCTTCCTCAACCTGCCCATAATTTCAACTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA

mRNA sequence

ATGGATGAGACCTCCGCTCTAAAACCAAACCCACCTTCGAATCTCCGCCGCAGAAACTCCATCACGGTGCCCGTTGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGCAGCGGCATCGCCGACGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCCATCAGCTCCCCCACCGCTGCCTCTGCTGCAAATTCCGGGTACGAGATCTCGATCCGCAATCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTCAGCTTCCTCAACCTGCCCATAATTTCAACTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA

Coding sequence (CDS)

ATGGATGAGACCTCCGCTCTAAAACCAAACCCACCTTCGAATCTCCGCCGCAGAAACTCCATCACGGTGCCCGTTGCCGTGCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGCAGCGGCATCGCCGACGCTACCGTTAGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCCGCCTCCTCTCCTTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCCATCAGCTCCCCCACCGCTGCCTCTGCTGCAAATTCCGGGTACGAGATCTCGATCCGCAATCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGTCCTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTCAGATTTTCAGCTTGTCTCAGCTTCCTCAACCTGCCCATAATTTCAACTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGGTCAATTTTGTCTAA

Protein sequence

MDETSALKPNPPSNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIKSSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV

Homology

[Close]

BLAST of Lsi03G018470 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MDETSALKP+PP SNLRRRNSITVPVAVPSKLNLLAATK SRGA ASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLRDILPS TA SSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHLLRRIWLRFSACLSFLNLPIIS+ITNAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Lsi03G018470 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MDETSALKP+PP SNLRRRNSITVPVAVPSKLNLLAATK SRGA ASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLRDILPS TA SSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHLLRRIWLRFSACLSFLNLPIIS+ITNAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Lsi03G018470 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.4e-73
Identity = 155/168 (92.26%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+ P SNLRRRNSITVPVAVPSKLNLLAATKSSRGA ASP LPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSL+DILPS TA SSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHLLRRIWLRFSACLSFLNLPIIS+ITNAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Lsi03G018470 vs. ExPASy TrEMBL
Match: A0A6J1F639 (uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC111442465 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+PP  NLRRRNSITVPV VPSKL+LLAATKSSRG A+SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSLLAATKSSRGVASSPQLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPSATAI SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SP SSGPHLL RIWLRFSA LSF+NLPIIS++TNAF+RIFRVVGV+FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 166

[Close]

BLAST of Lsi03G018470 vs. ExPASy TrEMBL
Match: A0A6J1J4V9 (uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.6e-67
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+PP  NLRRRNSITVPV V SKLNLLAATKSSRG A+SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVSSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPSATAI SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SP SSGPHLL RIWLRFSA LSF+NLPIIS+ITNAF+RIFRVVGV+FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSITNAFNRIFRVVGVSFV 166

[Close]

BLAST of Lsi03G018470 vs. NCBI nr
Match: XP_008442897.1 (PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa] >TYK25301.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 158/168 (94.05%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MDETSALKP+PP SNLRRRNSITVPVAVPSKLNLLAATK SRGA ASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLRDILPS TA SSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHLLRRIWLRFSACLSFLNLPIIS+ITNAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Lsi03G018470 vs. NCBI nr
Match: XP_011652026.1 (uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical protein Csa_001918 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 9.1e-73
Identity = 155/168 (92.26%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+ P SNLRRRNSITVPVAVPSKLNLLAATKSSRGA ASP LPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSL+DILPS TA SSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHLLRRIWLRFSACLSFLNLPIIS+ITNAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of Lsi03G018470 vs. NCBI nr
Match: XP_038904448.1 (uncharacterized protein LOC120090813 [Benincasa hispida])

HSP 1 Score: 275.8 bits (704), Expect = 2.5e-70
Identity = 154/168 (91.67%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MDETSALKP+PP SNLRRRNSIT+PVAVPSKLNLLA TK     AASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPLSNLRRRNSITLPVAVPSKLNLLAPTK-----AASPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEI+IRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEITIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SPGSSGPHL RRIWLRFSACLSFLNLPIIS I NAFDRIFRVVGVNFV
Sbjct: 121 SPGSSGPHLFRRIWLRFSACLSFLNLPIISRIANAFDRIFRVVGVNFV 163

[Close]

BLAST of Lsi03G018470 vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 148/168 (88.10%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+PP  NLRRRNSITVPV VPSKLNLLAATKSSRG A+SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
            SSS SSPSLAYTSLRDILPSATAI SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  -SSSPSSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SP SSGPHLL RIWLRFSA LSF+NLPIIS++TNAF+RIFRVVGV+FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 167

[Close]

BLAST of Lsi03G018470 vs. NCBI nr
Match: XP_022935679.1 (uncharacterized protein LOC111442465 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 4.4e-67
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MDETSALKPNPP-SNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIK 60
           MD+TSALKP+PP  NLRRRNSITVPV VPSKL+LLAATKSSRG A+SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSLLAATKSSRGVASSPQLPLAFELVPIK 60

Query: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSLRDILPSATAI SPTAASAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFRVVGVNFV 168
           SP SSGPHLL RIWLRFSA LSF+NLPIIS++TNAF+RIFRVVGV+FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 166

[Close]

BLAST of Lsi03G018470 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 10  NPPSNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIKSSSSASSPSL 69
           +P + LRR  SI       S +  L   +     A++P     +EL+ +K SS      +
Sbjct: 8   SPATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FV 67

Query: 70  AYTSLRDI----------LPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQP--M 129
           AYTSLRDI          LPS     SP  ++AA    +ISIRNRLVKQAA +YLQP  +
Sbjct: 68  AYTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVL 127

Query: 130 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFR 161
           +SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 128 TSSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of Lsi03G018470 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 10  NPPSNLRRRNSITVPVAVPSKLNLLAATKSSRGAAASPTLPLAFELVPIKSSSSASSPSL 69
           +P + LRR  SI       S +  L   +     A++P     +EL+ +K SS      +
Sbjct: 8   SPATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FV 67

Query: 70  AYTSLRDI----------LPSATAISSPTAASAANSGYEISIRNRLVKQAAWAYLQP--M 129
           AYTSLRDI          LPS     SP  ++AA    +ISIRNRLVKQAA +YLQP  +
Sbjct: 68  AYTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVL 127

Query: 130 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFDRIFR 161
           +SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 128 TSSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of Lsi03G018470 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 56/123 (45.53%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 41  RGAAASPTLPLAFELVPIKSSSSASSPSLAYTSLRDILP-SATAISSPT---AASAANSG 100
           R  A S TL L  ELV +  SS    P   YTSL+DILP S+T + SP    A ++A SG
Sbjct: 15  RNGAVSQTLDL--ELVSVNKSS--EDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSG 74

Query: 101 YEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISTITNAFD 160
             I+IRNRLVKQAA +YLQP + +P SS P  LRR+   F        + ++S   +A  
Sbjct: 75  PTITIRNRLVKQAACSYLQPSTPTP-SSNPSFLRRVSSSF--------IRLVSAFFDALL 124

The following BLAST results are available for this feature:

BLAST of Lsi03G018470 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G018470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKK1	1.4e-74	94.05	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B6B1	1.4e-74	94.05	uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=...	[more]
A0A0A0LE45	4.4e-73	92.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1	[more]
A0A6J1F639	2.1e-67	87.50	uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A6J1J4V9	3.6e-67	88.10	uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768...	[more]

BLAST of Lsi03G018470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442897.1	2.8e-74	94.05	PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 put...	[more]
XP_011652026.1	9.1e-73	92.26	uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical ...	[more]
XP_038904448.1	2.5e-70	91.67	uncharacterized protein LOC120090813 [Benincasa hispida]	[more]
XP_023526406.1	1.5e-67	88.10	uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]	[more]
XP_022935679.1	4.4e-67	87.50	uncharacterized protein LOC111442465 [Cucurbita moschata]	[more]

BLAST of Lsi03G018470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	1.5e-12	38.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	1.5e-12	38.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	2.8e-11	45.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 1..158
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018470.1	Lsi03G018470.1	mRNA