Lsi03G018320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	chr03: 29805068 .. 29805736 (+)
RNA-Seq Expression	Lsi03G018320
Synteny	Lsi03G018320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACAAACAACCCCACCTCAACGGCGCCTTCTACGGCCCTGCCGTCCCTCCTCCGACAAAGACTTACCACCGCCATGGCCACGGCCGCGGCTGCGCTTGCTGCCTCCTCACCACCTTTCTCAAGCTCCTCATCACCATAGTCGTCGTGGTTGGTCTAGCAGTATTGATATTATGGCTCGTATTCCGTCCCAATAAGCTCAAGTTCGACGTCACCGGCGCCGAACTCACCCAATTGAACGTCACCGGCAACCAACTCCATTACAATCTCGCTTTAAACCTCACTGTCCGAAACCCCAACAAGCGAATCGGAGTTTACTACGACGTCATCGAAGCTTCCTCCTTTTACAAAGACCAGAGGCTAAATACCCAGTGGCTACCGCCGTTCTACCAAGGCCACAAAACCACCACCGTCCTCAGCCCCCACTTCGACGGCCAGGCGTTGGTGCTTCTCACCGGCGATAAGCTTGCAGAGTTCAACGCCGAGACACTTGCCGGCGCCTTCGACATCGACTTGAAGATCCGTCTCCGGCTGAGGTTGAAGGTCGGCGCCGTGAGGATCGGGAAGTTCAAGCCAAAGGTTAACTGCGAAATGAAGGTTCCATTGAAATCGAATGCAAACTCCTTTACTTTCTTTCAGACCACTGGCTGCGACTTCGATTTTTGA

mRNA sequence

ATGGCCGACAAACAACCCCACCTCAACGGCGCCTTCTACGGCCCTGCCGTCCCTCCTCCGACAAAGACTTACCACCGCCATGGCCACGGCCGCGGCTGCGCTTGCTGCCTCCTCACCACCTTTCTCAAGCTCCTCATCACCATAGTCGTCGTGGTTGGTCTAGCAGTATTGATATTATGGCTCGTATTCCGTCCCAATAAGCTCAAGTTCGACGTCACCGGCGCCGAACTCACCCAATTGAACGTCACCGGCAACCAACTCCATTACAATCTCGCTTTAAACCTCACTGTCCGAAACCCCAACAAGCGAATCGGAGTTTACTACGACGTCATCGAAGCTTCCTCCTTTTACAAAGACCAGAGGCTAAATACCCAGTGGCTACCGCCGTTCTACCAAGGCCACAAAACCACCACCGTCCTCAGCCCCCACTTCGACGGCCAGGCGTTGGTGCTTCTCACCGGCGATAAGCTTGCAGAGTTCAACGCCGAGACACTTGCCGGCGCCTTCGACATCGACTTGAAGATCCGTCTCCGGCTGAGGTTGAAGGTCGGCGCCGTGAGGATCGGGAAGTTCAAGCCAAAGGTTAACTGCGAAATGAAGGTTCCATTGAAATCGAATGCAAACTCCTTTACTTTCTTTCAGACCACTGGCTGCGACTTCGATTTTTGA

Coding sequence (CDS)

ATGGCCGACAAACAACCCCACCTCAACGGCGCCTTCTACGGCCCTGCCGTCCCTCCTCCGACAAAGACTTACCACCGCCATGGCCACGGCCGCGGCTGCGCTTGCTGCCTCCTCACCACCTTTCTCAAGCTCCTCATCACCATAGTCGTCGTGGTTGGTCTAGCAGTATTGATATTATGGCTCGTATTCCGTCCCAATAAGCTCAAGTTCGACGTCACCGGCGCCGAACTCACCCAATTGAACGTCACCGGCAACCAACTCCATTACAATCTCGCTTTAAACCTCACTGTCCGAAACCCCAACAAGCGAATCGGAGTTTACTACGACGTCATCGAAGCTTCCTCCTTTTACAAAGACCAGAGGCTAAATACCCAGTGGCTACCGCCGTTCTACCAAGGCCACAAAACCACCACCGTCCTCAGCCCCCACTTCGACGGCCAGGCGTTGGTGCTTCTCACCGGCGATAAGCTTGCAGAGTTCAACGCCGAGACACTTGCCGGCGCCTTCGACATCGACTTGAAGATCCGTCTCCGGCTGAGGTTGAAGGTCGGCGCCGTGAGGATCGGGAAGTTCAAGCCAAAGGTTAACTGCGAAATGAAGGTTCCATTGAAATCGAATGCAAACTCCTTTACTTTCTTTCAGACCACTGGCTGCGACTTCGATTTTTGA

Protein sequence

MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILWLVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLRLKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF

Homology

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BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 120/229 (52.40%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPT-KTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLIL 60
           MA +QP LNGAFYGP+VPPP  K Y+R GHGRGC CCLL+ F+K++I+++V++G+A LI 
Sbjct: 1   MAAEQP-LNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF 60

Query: 61  WLVFRPNKLKFDVTGAELTQLNVTG--NQLHYNLALNLTVRNPNKRIGVYYDVIEASSFY 120
           WL+ RP  +KF VT A LT+ + T   N L YNLAL + VRNPNKRIG+YYD IEA ++Y
Sbjct: 61  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 120

Query: 121 KDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRL 180
           + +R +T  L PFYQGHK TTVL+P F GQ LV+    +    NAE ++G ++I++K RL
Sbjct: 121 EGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRL 180

Query: 181 RLRLKVGAVRIGKFKPKVNC-EMKVPLKSNANSFTFFQTT---GCDFDF 223
           R+R K+G ++  + KPKV+C ++++PL S +N  T   T     CDFDF
Sbjct: 181 RVRFKLGDLKFRRIKPKVDCDDLRLPL-STSNGTTTTSTVFPIKCDFDF 227

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BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-56
Identity = 110/228 (48.25%), Postives = 146/228 (64.04%), Query Frame = 0


Query: 8   LNGAFYGPAVPPPTKTYHRHGHGRG-----------CACCLLTTFLKLLITIVVVVGLAV 67
           LNGA+YGP++PPP K  H HG   G           C CC+L+    +LITI V++G+A 
Sbjct: 4   LNGAYYGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAA 63

Query: 68  LILWLVFRPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIGVYYDVIEASS 127
           LI+WL+FRPN +KF VT A+LT+  +   N L YNL LN T+RNPN+RIGVYYD IE   
Sbjct: 64  LIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123

Query: 128 FYKDQRLN-TQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLK 187
           +Y DQR   +  +  FYQGHK TTV+     GQ LVLL G +  + N +  +  + ID K
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAK 183

Query: 188 IRLRLRLKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           +RL++R K G ++  +FKPK+ C++KVPL SN+ S   FQ T CD DF
Sbjct: 184 LRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDVDF 231

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BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.7e-49
Identity = 102/238 (42.86%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTK---TYHRHGHG-----------RGCACCLLTTFLKLLI 60
           M  KQP+LNGA+YGP++PPP K   +Y+  G G           R C CC+L+    +LI
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILI 60

Query: 61  TIVVVVGLAVLILWLVFRPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIG 120
            + V++G+A LILWL+FRPN +KF V  A L + +    N LHY+L LN T+RNPN+R+G
Sbjct: 61  AVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDVIEASSFYKDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETL 180
           VYYD    S +Y DQR  +  +  FYQGHK TTV+    +GQ LV+L      +   +  
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEK 180

Query: 181 AGAFDIDLKIRLRLRLKVGAVRIGKFKPKVNC-EMKVPLKSNANSFTF-FQTTGCDFD 222
           +G + I+ K+RL +R K   ++  K KPK+ C ++K+PL S+ ++  F FQ   CDFD
Sbjct: 181 SGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDFD 238

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BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 64  RPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQRL 123
           R N +KF V  AELT  ++ + N L Y+L+LNL++RN    IG++YD  EA+ +Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 124 NTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLRLK 183
               +P FY G K T +L   F+GQ LVLL G++  +F  +   G + ID+K+ +  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 184 VGAVRIGKFKPKVNCEMKVPLKSNANSFT 212
           V  +     KP V C +K+PL   +++ T
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNST 151

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BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 59/196 (30.10%), Postives = 96/196 (48.98%), Query Frame = 0


Query: 22  KTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILWLVFRPNKLKFDVTGAELTQLN 81
           K    HGH R     L+      +I ++ ++ L +L++W + +P+K +F +  A +   N
Sbjct: 2   KDCENHGHSRR---KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFN 61

Query: 82  VTGNQ---LHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQRLN-TQWLPPFYQGHKTT 141
           V+GN    L  N  + L+ RNPN +IG+YYD ++  + Y+ Q++     +PP YQGHK  
Sbjct: 62  VSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDV 121

Query: 142 TVLSPHFDGQALVLLTGDKLAEFNAETL-----AGAFDIDLKIRLRLRLKVGAVRIGKFK 201
            + SP   G      T   +A FN  +L      G   + ++   R+R KVG    GK+ 
Sbjct: 122 DIWSPFVYG------TSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYH 181

Query: 202 PKVNCEMKVPLKSNAN 209
             V C   +   + AN
Sbjct: 182 LHVKCPAYINFGNKAN 188

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BLAST of Lsi03G018320 vs. ExPASy TrEMBL
Match: A0A5A7TQI6 (Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004490 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 191/222 (86.04%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGHGRGCACCLLTTFLK  I IVVV+G+ VL+LW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHGRGCACCLLTTFLKFFIAIVVVLGVTVLVLW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRPNKLKF VTGAELT+ NV+GNQLHYNLALNLTVRNPNKRIGVYYDVIEAS +YKDQ
Sbjct: 61  LVFRPNKLKFHVTGAELTRFNVSGNQLHYNLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWL PFYQGHKTTTVLSPHFDGQ +V   GDKL EFN ETLAG F++D+K RLRLR
Sbjct: 121 RLNTQWLTPFYQGHKTTTVLSPHFDGQQIVFFAGDKLTEFNGETLAGIFEVDVKFRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKFKPKVNCE+KVPLKSN NSFT FQTT CDFDF
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTSFQTTRCDFDF 222

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BLAST of Lsi03G018320 vs. ExPASy TrEMBL
Match: A0A1S3B7L1 (protein YLS9 OS=Cucumis melo OX=3656 GN=LOC103486671 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 191/222 (86.04%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGHGRGCACCLLTTFLK  I IVVV+G+ VL+LW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHGRGCACCLLTTFLKFFIAIVVVLGVTVLVLW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRPNKLKF VTGAELT+ NV+GNQLHYNLALNLTVRNPNKRIGVYYDVIEAS +YKDQ
Sbjct: 61  LVFRPNKLKFHVTGAELTRFNVSGNQLHYNLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWL PFYQGHKTTTVLSPHFDGQ +V   GDKL EFN ETLAG F++D+K RLRLR
Sbjct: 121 RLNTQWLTPFYQGHKTTTVLSPHFDGQQIVFFAGDKLTEFNGETLAGIFEVDVKFRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKFKPKVNCE+KVPLKSN NSFT FQTT CDFDF
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTSFQTTRCDFDF 222

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BLAST of Lsi03G018320 vs. ExPASy TrEMBL
Match: A0A0A0LBJ4 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779020 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.3e-108
Identity = 188/222 (84.68%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYH H H RGCACCLLTTFLKLL+TIVVVVG+AVLILW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPPKTYHHHAHRRGCACCLLTTFLKLLVTIVVVVGIAVLILW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
            +FRP+KL FDVT AELT+ N++GNQLHYNLALNLT+RNPNKRIGVYYDVIEAS FYKDQ
Sbjct: 61  FLFRPHKLTFDVTDAELTRFNISGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWLPPFYQGHKTTTVLSPHFDGQ +V L GDKL EFN ETLAG F++DL+ RL+LR
Sbjct: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQQIVFLAGDKLTEFNGETLAGIFNVDLRFRLQLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVG VRIGKFKPKVNCE+KVPLKSNANSFTF Q T CDFDF
Sbjct: 181 LKVGVVRIGKFKPKVNCELKVPLKSNANSFTFLQATRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. ExPASy TrEMBL
Match: A0A5A7TKU8 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004500 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 189/222 (85.14%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGH RGCACCLLTTFLKLLITIVVVVG+AVL+LW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHRRGCACCLLTTFLKLLITIVVVVGIAVLVLW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRP+KL F VT AELT+ N++GNQLHYN+ALNLTVRNPN RIGVYYDVIEAS FYKDQ
Sbjct: 61  LVFRPHKLTFHVTDAELTRFNISGNQLHYNMALNLTVRNPNNRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWLPPFYQ HKTTTVL PHF+GQ +V L GDKL EFN ETLAG F++DL  RL+LR
Sbjct: 121 RLNTQWLPPFYQDHKTTTVLRPHFNGQQIVFLAGDKLTEFNGETLAGVFNVDLTFRLQLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKFKPKVNCE+KVPLKSN NSFTFFQTT CDFDF
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTFFQTTRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. ExPASy TrEMBL
Match: A0A0A0LGS5 (Hairpin-inducing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779010 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 189/222 (85.14%), Postives = 205/222 (92.34%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGHGRGCACCLLTTFLK LI IVVV+G+AVL+ W
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHGRGCACCLLTTFLKFLIAIVVVLGVAVLVFW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRPNKLKFDVTGA+LT+ NV+GNQLHY+LALNLTVRNPNKRIGVYYDVIEAS +YKDQ
Sbjct: 61  LVFRPNKLKFDVTGAQLTRFNVSGNQLHYDLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWL PFYQGHKTT+VLSP FDGQ +V+  GDKL EFN ETLAG F++D+KIRLRLR
Sbjct: 121 RLNTQWLTPFYQGHKTTSVLSPQFDGQQIVIFAGDKLTEFNGETLAGVFEVDVKIRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKF+PKVNCE+KVPLKSN NSFT FQTT CDFDF
Sbjct: 181 LKVGAVRIGKFRPKVNCELKVPLKSNPNSFT-FQTTRCDFDF 221

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BLAST of Lsi03G018320 vs. NCBI nr
Match: XP_038905132.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 405.2 bits (1040), Expect = 3.6e-109
Identity = 193/222 (86.94%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHG GRGCACCL TTFLKLLI IVVVVG+AVLILW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGRGRGCACCLFTTFLKLLIGIVVVVGVAVLILW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           L+FRPNKLKFDV GAELT+ NV+GNQLHYNLALNLT+RNPNKRIGVYYDVIEAS FYKDQ
Sbjct: 61  LIFRPNKLKFDVNGAELTRFNVSGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWLP FYQGHKTTTVLSPHFDGQ +VLL G+KLAEFN ETLAG FD+D+K RLRLR
Sbjct: 121 RLNTQWLPAFYQGHKTTTVLSPHFDGQQVVLLAGEKLAEFNGETLAGVFDVDVKFRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIG F+PKVNCE+ VPLKSNANS  FFQTT CDFDF
Sbjct: 181 LKVGAVRIGNFRPKVNCELNVPLKSNANSSPFFQTTRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. NCBI nr
Match: XP_008442908.1 (PREDICTED: protein YLS9 [Cucumis melo] >KAA0043821.1 protein YLS9 [Cucumis melo var. makuwa] >TYK25311.1 protein YLS9 [Cucumis melo var. makuwa])

HSP 1 Score: 404.1 bits (1037), Expect = 8.0e-109
Identity = 191/222 (86.04%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGHGRGCACCLLTTFLK  I IVVV+G+ VL+LW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHGRGCACCLLTTFLKFFIAIVVVLGVTVLVLW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRPNKLKF VTGAELT+ NV+GNQLHYNLALNLTVRNPNKRIGVYYDVIEAS +YKDQ
Sbjct: 61  LVFRPNKLKFHVTGAELTRFNVSGNQLHYNLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWL PFYQGHKTTTVLSPHFDGQ +V   GDKL EFN ETLAG F++D+K RLRLR
Sbjct: 121 RLNTQWLTPFYQGHKTTTVLSPHFDGQQIVFFAGDKLTEFNGETLAGIFEVDVKFRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKFKPKVNCE+KVPLKSN NSFT FQTT CDFDF
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTSFQTTRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. NCBI nr
Match: XP_011652031.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 188/222 (84.68%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYH H H RGCACCLLTTFLKLL+TIVVVVG+AVLILW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPPKTYHHHAHRRGCACCLLTTFLKLLVTIVVVVGIAVLILW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
            +FRP+KL FDVT AELT+ N++GNQLHYNLALNLT+RNPNKRIGVYYDVIEAS FYKDQ
Sbjct: 61  FLFRPHKLTFDVTDAELTRFNISGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWLPPFYQGHKTTTVLSPHFDGQ +V L GDKL EFN ETLAG F++DL+ RL+LR
Sbjct: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQQIVFLAGDKLTEFNGETLAGIFNVDLRFRLQLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVG VRIGKFKPKVNCE+KVPLKSNANSFTF Q T CDFDF
Sbjct: 181 LKVGVVRIGKFKPKVNCELKVPLKSNANSFTFLQATRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. NCBI nr
Match: XP_008442909.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043820.1 protein YLS9-like [Cucumis melo var. makuwa] >TYK25312.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107
Identity = 189/222 (85.14%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGH RGCACCLLTTFLKLLITIVVVVG+AVL+LW
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHRRGCACCLLTTFLKLLITIVVVVGIAVLVLW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRP+KL F VT AELT+ N++GNQLHYN+ALNLTVRNPN RIGVYYDVIEAS FYKDQ
Sbjct: 61  LVFRPHKLTFHVTDAELTRFNISGNQLHYNMALNLTVRNPNNRIGVYYDVIEASPFYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWLPPFYQ HKTTTVL PHF+GQ +V L GDKL EFN ETLAG F++DL  RL+LR
Sbjct: 121 RLNTQWLPPFYQDHKTTTVLRPHFNGQQIVFLAGDKLTEFNGETLAGVFNVDLTFRLQLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKFKPKVNCE+KVPLKSN NSFTFFQTT CDFDF
Sbjct: 181 LKVGAVRIGKFKPKVNCELKVPLKSNPNSFTFFQTTRCDFDF 222

[Close]

BLAST of Lsi03G018320 vs. NCBI nr
Match: XP_004136508.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107
Identity = 189/222 (85.14%), Postives = 205/222 (92.34%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTKTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLILW 60
           MADKQPHLNGAFYGPAVPPP KTYHRHGHGRGCACCLLTTFLK LI IVVV+G+AVL+ W
Sbjct: 1   MADKQPHLNGAFYGPAVPPPAKTYHRHGHGRGCACCLLTTFLKFLIAIVVVLGVAVLVFW 60

Query: 61  LVFRPNKLKFDVTGAELTQLNVTGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQ 120
           LVFRPNKLKFDVTGA+LT+ NV+GNQLHY+LALNLTVRNPNKRIGVYYDVIEAS +YKDQ
Sbjct: 61  LVFRPNKLKFDVTGAQLTRFNVSGNQLHYDLALNLTVRNPNKRIGVYYDVIEASPYYKDQ 120

Query: 121 RLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLR 180
           RLNTQWL PFYQGHKTT+VLSP FDGQ +V+  GDKL EFN ETLAG F++D+KIRLRLR
Sbjct: 121 RLNTQWLTPFYQGHKTTSVLSPQFDGQQIVIFAGDKLTEFNGETLAGVFEVDVKIRLRLR 180

Query: 181 LKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           LKVGAVRIGKF+PKVNCE+KVPLKSN NSFT FQTT CDFDF
Sbjct: 181 LKVGAVRIGKFRPKVNCELKVPLKSNPNSFT-FQTTRCDFDF 221

[Close]

BLAST of Lsi03G018320 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 234.6 bits (597), Expect = 7.8e-62
Identity = 120/229 (52.40%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPT-KTYHRHGHGRGCACCLLTTFLKLLITIVVVVGLAVLIL 60
           MA +QP LNGAFYGP+VPPP  K Y+R GHGRGC CCLL+ F+K++I+++V++G+A LI 
Sbjct: 1   MAAEQP-LNGAFYGPSVPPPAPKGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIF 60

Query: 61  WLVFRPNKLKFDVTGAELTQLNVTG--NQLHYNLALNLTVRNPNKRIGVYYDVIEASSFY 120
           WL+ RP  +KF VT A LT+ + T   N L YNLAL + VRNPNKRIG+YYD IEA ++Y
Sbjct: 61  WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 120

Query: 121 KDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRL 180
           + +R +T  L PFYQGHK TTVL+P F GQ LV+    +    NAE ++G ++I++K RL
Sbjct: 121 EGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRL 180

Query: 181 RLRLKVGAVRIGKFKPKVNC-EMKVPLKSNANSFTFFQTT---GCDFDF 223
           R+R K+G ++  + KPKV+C ++++PL S +N  T   T     CDFDF
Sbjct: 181 RVRFKLGDLKFRRIKPKVDCDDLRLPL-STSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of Lsi03G018320 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57
Identity = 110/228 (48.25%), Postives = 146/228 (64.04%), Query Frame = 0


Query: 8   LNGAFYGPAVPPPTKTYHRHGHGRG-----------CACCLLTTFLKLLITIVVVVGLAV 67
           LNGA+YGP++PPP K  H HG   G           C CC+L+    +LITI V++G+A 
Sbjct: 4   LNGAYYGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAA 63

Query: 68  LILWLVFRPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIGVYYDVIEASS 127
           LI+WL+FRPN +KF VT A+LT+  +   N L YNL LN T+RNPN+RIGVYYD IE   
Sbjct: 64  LIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123

Query: 128 FYKDQRLN-TQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLK 187
           +Y DQR   +  +  FYQGHK TTV+     GQ LVLL G +  + N +  +  + ID K
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAK 183

Query: 188 IRLRLRLKVGAVRIGKFKPKVNCEMKVPLKSNANSFTFFQTTGCDFDF 223
           +RL++R K G ++  +FKPK+ C++KVPL SN+ S   FQ T CD DF
Sbjct: 184 LRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDVDF 231

[Close]

BLAST of Lsi03G018320 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-50
Identity = 102/238 (42.86%), Postives = 145/238 (60.92%), Query Frame = 0


Query: 1   MADKQPHLNGAFYGPAVPPPTK---TYHRHGHG-----------RGCACCLLTTFLKLLI 60
           M  KQP+LNGA+YGP++PPP K   +Y+  G G           R C CC+L+    +LI
Sbjct: 1   MGSKQPYLNGAYYGPSIPPPPKAHRSYNSPGFGCCCFSCLGSCLRCCGCCILSLICNILI 60

Query: 61  TIVVVVGLAVLILWLVFRPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIG 120
            + V++G+A LILWL+FRPN +KF V  A L + +    N LHY+L LN T+RNPN+R+G
Sbjct: 61  AVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVG 120

Query: 121 VYYDVIEASSFYKDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETL 180
           VYYD    S +Y DQR  +  +  FYQGHK TTV+    +GQ LV+L      +   +  
Sbjct: 121 VYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEK 180

Query: 181 AGAFDIDLKIRLRLRLKVGAVRIGKFKPKVNC-EMKVPLKSNANSFTF-FQTTGCDFD 222
           +G + I+ K+RL +R K   ++  K KPK+ C ++K+PL S+ ++  F FQ   CDFD
Sbjct: 181 SGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDFD 238

[Close]

BLAST of Lsi03G018320 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 181.8 bits (460), Expect = 6.0e-46
Identity = 94/233 (40.34%), Postives = 137/233 (58.80%), Query Frame = 0


Query: 8   LNGAFYGPAVPPPTKTYHRHGH-----GRG-CAC----------CLLTTFLKLLITIVVV 67
           LNGA YGP + PP KTY+ HG      G G C C          CL+     +LI ++V 
Sbjct: 5   LNGASYGPPIKPPVKTYYSHGRRGSDVGCGICGCFSSCLLCCGGCLVNIICNILIGVLVC 64

Query: 68  VGLAVLILWLVFRPNKLKFDVTGAELT--QLNVTGNQLHYNLALNLTVRNPNKRIGVYYD 127
           +G+  LILW + RPN +KF VT A+LT  + +   + LHYN++LN ++RNPN+R+G++YD
Sbjct: 65  LGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYD 124

Query: 128 VIEASSFYKDQRLNTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAF 187
            +E   +Y DQR +   +  FYQGHK TTV+    +GQ LVLL      +F  +  +G +
Sbjct: 125 QLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGVY 184

Query: 188 DIDLKIRLRLRLKVGAVRIGKFKPKVNCEMKVPLKSNANSFTF-FQTTGCDFD 222
            ID+K+R +LR K G +     +PK+ C +KVPL ++++   F F  T C  D
Sbjct: 185 RIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPTKCHVD 237

[Close]

BLAST of Lsi03G018320 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25
Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 64  RPNKLKFDVTGAELTQLNV-TGNQLHYNLALNLTVRNPNKRIGVYYDVIEASSFYKDQRL 123
           R N +KF V  AELT  ++ + N L Y+L+LNL++RN    IG++YD  EA+ +Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 124 NTQWLPPFYQGHKTTTVLSPHFDGQALVLLTGDKLAEFNAETLAGAFDIDLKIRLRLRLK 183
               +P FY G K T +L   F+GQ LVLL G++  +F  +   G + ID+K+ +  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 184 VGAVRIGKFKPKVNCEMKVPLKSNANSFT 212
           V  +     KP V C +K+PL   +++ T
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNST 151

The following BLAST results are available for this feature:

BLAST of Lsi03G018320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	1.1e-60	52.40	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	1.6e-56	48.25	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	5.7e-49	42.86	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	2.2e-24	38.93	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q9SRN0	1.3e-16	30.10	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]

BLAST of Lsi03G018320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQI6	3.9e-109	86.04	Protein YLS9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004490 ...	[more]
A0A1S3B7L1	3.9e-109	86.04	protein YLS9 OS=Cucumis melo OX=3656 GN=LOC103486671 PE=4 SV=1	[more]
A0A0A0LBJ4	7.3e-108	84.68	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779020 PE=4 ...	[more]
A0A5A7TKU8	1.6e-107	85.14	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A0A0LGS5	1.6e-107	85.14	Hairpin-inducing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779010 PE=4 SV=1	[more]

BLAST of Lsi03G018320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905132.1	3.6e-109	86.94	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
XP_008442908.1	8.0e-109	86.04	PREDICTED: protein YLS9 [Cucumis melo] >KAA0043821.1 protein YLS9 [Cucumis melo ...	[more]
XP_011652031.1	1.5e-107	84.68	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]
XP_008442909.1	3.4e-107	85.14	PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043820.1 protein YLS9-like [Cuc...	[more]
XP_004136508.1	3.4e-107	85.14	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]

BLAST of Lsi03G018320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	7.8e-62	52.40	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	1.2e-57	48.25	NDR1/HIN1-like 3	[more]
AT3G11650.1	4.0e-50	42.86	NDR1/HIN1-like 2	[more]
AT2G35460.1	6.0e-46	40.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	1.5e-25	38.93	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 94..198 e-value: 6.3E-15 score: 55.6
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 26..220
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 26..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018320.1	Lsi03G018320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma