Lsi03G018090 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G018090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear transcription factor Y subunit
Location	chr03: 29531882 .. 29536352 (+)
RNA-Seq Expression	Lsi03G018090
Synteny	Lsi03G018090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTACACTTGTGTGCATTAATTCTTTTTCTTTCTTTCTCTCTCTCTCTCTCTCCTCTTTCTCTCTCTGTTAGTGCTTTGCTTGAAATGTACCAACAGCACTCCTATCAAATGGGGTTCCTGTGCCTGTATTCAATACCTGCTGCTGCTGCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTGTTTTTGCTGATTGTGAATTTGTGAGTAATTTTTACCCTCTGATTTTTGCCCCTTTTCTTCTCTTGTTCTTCTATGAACTAAGGTTTTTCAGCTTCAGTCTCAGCTCTGATTTCTTCTTCCTTCATTTTTCCAACTGGGGTTGTTTTTTTGGGACTTTTTTTCTTCTGGGTTTGTTTCATCTTCCCTTTAATTGCTTCTGTTGATATTGGTTTGTTCAATCGCCTTGTATTCTGCTTTTGTTGCTCTGGTTTTTGTTCTATCTGTTGCCTTTGGTCTGTTGTTCTGGGGGAAATTTTTTTTATTATTGTTATTGGTTCATTGTTCTGTGATTGAAGGAAGTTCACGTGGGTGTTTTTCCCCTATTTTCTTTTTGGCCTTTTTGAAGTGGCTGTTCATCTTCTTCTTTTTGCTTAAACGCTGCTGCCCAAATGAACTCTCAATTTGTTTGATTTGTCTTTCCCATTTTTTGATTTCACTCCATCGTTTTATTGAGGTTAGACCCATTGTAAATGTCTCATAGTCTCTTTATTCCAACTCTGGATTGTAGGAATTGGTGTGAAGGGATTAGGAAAACATCTGTTTCTTGGTGATTTTGAGGCTTGGAAAATGGCACCACAAACTGGCTATTTGAAAGAACATGAAGGAACTGTTCCTAATTCCCTTGGCCAGTTATCATCTTCTCCTGCTCGTTTATGGAGTGTCTTTGGGCAGGGTTCTCAATCAATCTTTGGGGATTTTAGTCAAGTGAAGGCTTCATCCATTGAACAACTTGGCAGTAATGGGAAAGAGTTCAATGGCACCAAACAAGCTGCTCATGGCCTGGAGAAAGTGAATATAGCTCCATTTTCCATCTATCCTGGTAACTTTCTGTTTGATTCATTTTCATTTCCCATGATCATATTTAAGTATACCAAAATGCATGAGAACATCTTGTAGGTTACTTATGCTGTGTTTCTCTTTAGATTACATGAAGGATTTCTTCCAAGGATGTAATGTTTGATGTATTAGCCTTCTTTTTTTTCCAAGCAATTTACTTACAAAAAGAAGCTGCAGAGAAGTAGTGGAAGGTTGACCTTATAGGAAATTAATCTTTGGAAGTTAGATGGTTTCTTCTTCTTCTTCTTCTTCTTACAATGGCACAGATGGTTTCTTCCTCTTCTTCTTACAATGGCGAATGTACGGATTTTCGAGTGATGATGTTATAGGCTATTTAAAAGTTAATTAGAGGTGGGAAAGGAGTGATTTATTCACAAAATCAATAGTTTCTCTAAGAATGAATAGCATAGGGAAATTGATAAAGAAGTTGGATACTTCTTTCCTGACATGTAGCAAACGTATGCTCTGAGGTACTACTGTTCAAAGAGAAATAGGTTTGGGGAGGAGGGACCTAGATTGTTAGCTGATCGACTTGACTTGTAACTTAGTAGCATGACGTTGGGGATGGGAGAAGTCGCGAGGGAGGGAAAGTGCTTGGGAGGGGATGCTTCTAGTAACCTGAGTTTGCTTAGGCTGGGAGGCAGGGAGCCTCTGAACATCTCCAAGCTTGCACCCTCGTTGTGAATAACTAATATTGAGTTCTATCCAATGGTAAAGAGTTTCCACCTTCAATATGGAGTTTACTACTAATGAAATAACATGCATCCAAATTCACCATATAAATATGGAAGTTAAGTGCAATCCTGTTGTGCAGTGTATGCCTCAATCATCTAACTTCTAGAACATAGAAGCCCGCCACTGCTTTCTTTTATGCATTCTACTCTTGAATTGGATCTCCCATTTTCCTTCACTAATATTTTACCTTCTCTTCAGAATATCATTTTCTAGCTAATACTTCAAGGATTTAGCATCATAGAACAATAAGCTAAAATGTCAACGATTATAAAACAAGAGGGAAAGAGAGTATGAAACTCAAGAAAGACTTTTTTCCCCTCTTTTTGAGCTTGCTTAGTTAATGTCTATCATTATGGTGATGTTTCTATCCTTATCTGATGAGAAAACTTCTCTTTTAAAAAAAAATACCTGCAGGTGACTGTAAGATTTCGATGGATGCACAAAAACCTTCACCAATTTTTTCCCTGCAATCACCCCTGTCAGAATATCAAAATCGTTTTGAGCTTGGATTTGGCCAGCCCATGGTATGATCTAAAATGTTGTTTGGATTTTTTTTTTTTTTTTTAAACAGTGATGTTTGTTTATATTATGTCGCTGATTTTGAAAAGCAAAAATGCAGATATGTGCAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGTATGTTTCCTTCCATTCTTCAACCACACCCATTTTCCATTCTACCTTTGTATGTATTCTATGAGAATGGTCTTATATTCTTAAATATTTTCCCACAAAAGGAGTACCGATGAAACTCTGTTAGATAGCTGCATAGGTTGAACTAAAGCATGCAAAAACTTCAGAATGGGAAGTGGAAAACAATGCAACATAGCTGAAAAACCAGAAATGGTGCCAAGGAAACAAAACTTAAGGCATCTCTGAAATGAATGTTGCCAAAAAATTAATGGGAAACAAAACTTAAGGTTTCATGTAATAAAGTATAGTAGAGAAGTATTTTTCTTGAACAATATTTTTGTTGGTTGGATTCTGGTATTCATTGTAAGCAATCTGGAAAGGTCGGTCTGCCTATCTGTGAGTAAAAAACTTGACTATTTGCAATATTCAGGGCCGGATTATGCTGCCAATGAGTTTAACATCAGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGTGCTAAGGCAATGATGGAGAATAAACTTGCAAGAACTCGTAAGGTATGTAAGTCTTACTCAGGTCTCTCTCCTAGCTCTTGATAGGTTATTTTTTTTTTTTTGGTCATGGAATTCGTAGAAGATGTATGTGCATCAAAGGATGTGAATAGTTTCCTTTTGGTATATTTCCTCACCGGTATAACTAGAACTAGAAGTCAACATGATCCAGATGTCTGTCTAAAGAGTAACTCCCGTCCGGTTTTATTTGTAATTTCTGTTTACCAACCTGAGGGCTATGATAATTTTTTATATCAACATTTGGCTTAAATATGATATACTAGTCAGCATCATGTTAATTCTGTACTCTGAACAAACTGTTATGTTTTTGCACAGTAACATCATCCGGTCCAAATATTTTTCTTTGTCCTGTGCAGAACACTATATATCCACATTACTCCTGCTGATATAGATTGCATATCTGTCTTACAGCCATATATGCACGAATCGCGTCATCTTCATGCAATGCGCCGTCCACGTGGATCTGGTGGCCGTTTCTTGAACACAAAGAATCTGAAAAATGGGAAACCCTCAATGGAACCAAATAAAATTGATGATGTGAACCTTTCTGATTCAACTGGTTCCCAATGTTCTGTGGTTTTGCAATCAGATAGTGGAACTTTGAACACTCCAAATGAAGCAAAGGGGAGGGGCTTCAGTCTCTTGAGTTCTGAGGTATCGAGCTTATTCTCGAGAGGACTACAACGTTTTCAAATCAACCATCTTGGACCATCAATGCCATCGCTGGCGGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGATGGCGAAGGCAATGGGTTCTTGGTGCAAGTCATTGCACCAAAACCCTGTCTTTGTTGCGACCAAATCCAGCTTGCTGCAATGTCGTCTAGACAATTGTCTCAGGCTTCGCGATGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTAACTAATGTTAGGTGTAGGATGTCTCTTATCTCTTTGTTTTACTTCTCAGTATGAGAAGTGGCTGAGAGAAACAAAAGGAATCATCCAATCAGATATGAAGTATGAAGTAATTGCAGTGCAGTAGACAAAAGGGTCTGTTCAAGAATAAGAGCATCAAGAGTATGAATTCTGCACTGTGTTTATTTATGACCCTGAAAGTAGAACAAGAAGAATGTTCATTAAGTCTAGTGTTTGGTTATTCAAATTCAGACATTCTGAAGCAATTTGTGCTGAACAAAGATGCTTGGCTTGTGGGTTTGTTTAAGGACAACTGTCATGTTTGTCTTTCAGTTTGTGTGTAATGAAGAATATTGTCTGTGTGTAATAAAGAATATTGTCTTTGTAATATCATCATCCATGCTGTTTCCTTTTTATCACAATGCAACATTTCTCTC

mRNA sequence

TTTACACTTGTGTGCATTAATTCTTTTTCTTTCTTTCTCTCTCTCTCTCTCTCCTCTTTCTCTCTCTGTTAGTGCTTTGCTTGAAATGTACCAACAGCACTCCTATCAAATGGGGTTCCTGTGCCTGTATTCAATACCTGCTGCTGCTGCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTGTTTTTGCTGATTGTGAATTTGAATTGGTGTGAAGGGATTAGGAAAACATCTGTTTCTTGGTGATTTTGAGGCTTGGAAAATGGCACCACAAACTGGCTATTTGAAAGAACATGAAGGAACTGTTCCTAATTCCCTTGGCCAGTTATCATCTTCTCCTGCTCGTTTATGGAGTGTCTTTGGGCAGGGTTCTCAATCAATCTTTGGGGATTTTAGTCAAGTGAAGGCTTCATCCATTGAACAACTTGGCAGTAATGGGAAAGAGTTCAATGGCACCAAACAAGCTGCTCATGGCCTGGAGAAAGTGAATATAGCTCCATTTTCCATCTATCCTGGTGACTGTAAGATTTCGATGGATGCACAAAAACCTTCACCAATTTTTTCCCTGCAATCACCCCTGTCAGAATATCAAAATCGTTTTGAGCTTGGATTTGGCCAGCCCATGATATGTGCAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGTTTAACATCAGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGTGCTAAGGCAATGATGGAGAATAAACTTGCAAGAACTCGTAAGCCATATATGCACGAATCGCGTCATCTTCATGCAATGCGCCGTCCACGTGGATCTGGTGGCCGTTTCTTGAACACAAAGAATCTGAAAAATGGGAAACCCTCAATGGAACCAAATAAAATTGATGATGTGAACCTTTCTGATTCAACTGGTTCCCAATGTTCTGTGGTTTTGCAATCAGATAGTGGAACTTTGAACACTCCAAATGAAGCAAAGGGGAGGGGCTTCAGTCTCTTGAGTTCTGAGGTATCGAGCTTATTCTCGAGAGGACTACAACGTTTTCAAATCAACCATCTTGGACCATCAATGCCATCGCTGGCGGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGATGGCGAAGGCAATGGGTTCTTGGTGCAAGTCATTGCACCAAAACCCTGTCTTTGTTGCGACCAAATCCAGCTTGCTGCAATGTCGTCTAGACAATTGTCTCAGGCTTCGCGATGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTAACTAATGTTAGGTGTAGGATGTCTCTTATCTCTTTGTTTTACTTCTCAGTATGAGAAGTGGCTGAGAGAAACAAAAGGAATCATCCAATCAGATATGAAGTATGAAGTAATTGCAGTGCAGTAGACAAAAGGGTCTGTTCAAGAATAAGAGCATCAAGAGTATGAATTCTGCACTGTGTTTATTTATGACCCTGAAAGTAGAACAAGAAGAATGTTCATTAAGTCTAGTGTTTGGTTATTCAAATTCAGACATTCTGAAGCAATTTGTGCTGAACAAAGATGCTTGGCTTGTGGGTTTGTTTAAGGACAACTGTCATGTTTGTCTTTCAGTTTGTGTGTAATGAAGAATATTGTCTGTGTGTAATAAAGAATATTGTCTTTGTAATATCATCATCCATGCTGTTTCCTTTTTATCACAATGCAACATTTCTCTC

Coding sequence (CDS)

ATGGCACCACAAACTGGCTATTTGAAAGAACATGAAGGAACTGTTCCTAATTCCCTTGGCCAGTTATCATCTTCTCCTGCTCGTTTATGGAGTGTCTTTGGGCAGGGTTCTCAATCAATCTTTGGGGATTTTAGTCAAGTGAAGGCTTCATCCATTGAACAACTTGGCAGTAATGGGAAAGAGTTCAATGGCACCAAACAAGCTGCTCATGGCCTGGAGAAAGTGAATATAGCTCCATTTTCCATCTATCCTGGTGACTGTAAGATTTCGATGGATGCACAAAAACCTTCACCAATTTTTTCCCTGCAATCACCCCTGTCAGAATATCAAAATCGTTTTGAGCTTGGATTTGGCCAGCCCATGATATGTGCAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGTTTAACATCAGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGTGCTAAGGCAATGATGGAGAATAAACTTGCAAGAACTCGTAAGCCATATATGCACGAATCGCGTCATCTTCATGCAATGCGCCGTCCACGTGGATCTGGTGGCCGTTTCTTGAACACAAAGAATCTGAAAAATGGGAAACCCTCAATGGAACCAAATAAAATTGATGATGTGAACCTTTCTGATTCAACTGGTTCCCAATGTTCTGTGGTTTTGCAATCAGATAGTGGAACTTTGAACACTCCAAATGAAGCAAAGGGGAGGGGCTTCAGTCTCTTGAGTTCTGAGGTATCGAGCTTATTCTCGAGAGGACTACAACGTTTTCAAATCAACCATCTTGGACCATCAATGCCATCGCTGGCGGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGTGACCTTTGTGTTTGA

Protein sequence

MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGKEFNGTKQAAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEIIDGGGHGMVLPKWVAAADNCCDLCV

Homology

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BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.1e-40
Identity = 130/326 (39.88%), Postives = 171/326 (52.45%), Query Frame = 0


Query: 20  GQLSSSPARLWSVFGQ---GSQSIFGDFSQVKASSIEQLGSNGKEFNGTKQAAHGLEKVN 79
           G  S+     W+ FG      +S+ GD        +  +G  G+  +    +A  L    
Sbjct: 9   GLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATHL---- 68

Query: 80  IAPFSIYPGDCKISMDAQKP-SPIFSLQSPLSEYQNRFELGFGQPMICANYPYME-QHYG 139
              FS+  GD K      KP    FS+QSP        ELGF QP I   YPY E Q+YG
Sbjct: 69  --AFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 128

Query: 140 ILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA---MMENKL-ARTR 199
           ++SAYG Q   R+MLP+++ ++D  IYVN+KQYHGIIRRRQ RAKA   + + KL +R R
Sbjct: 129 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 188

Query: 200 KPYMHESRHLHAMRRPRGSGGRFLNTK---------NLKNGKPSMEPNKIDDVNLSDSTG 259
           KPYMH SRHLHA+RRPRGSGGRFLNTK         N K G  SM+   I        + 
Sbjct: 189 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQ---IQSQPKPQQSN 248

Query: 260 SQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINH-LGPSMPSLAEII 319
           SQ S V+  ++GT+N  N     G ++  SEV+S+          N+ L   + SL    
Sbjct: 249 SQNSEVVHPENGTMNLSN-----GLNVSGSEVTSM----------NYFLSSPVHSLG--- 292

Query: 320 DGGGHGMVLP-KWVAAA----DNCCD 322
                GMV+P KW+AAA    + CC+
Sbjct: 309 -----GMVMPSKWIAAAAAMDNGCCN 292

[Close]

BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot
Match: Q8LFU0 (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 5.4e-40
Identity = 105/229 (45.85%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 56  GSNGKEFNGTK----QAAHGL--EKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEY 115
           G     F G K    +A  G+  ++ +   F+  PG  K S D  KP   F++QS     
Sbjct: 30  GEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRDVPKPHVAFAMQSAC--- 89

Query: 116 QNRFELGFGQPMICANYPYMEQHYGILSAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQY 175
              FE GF QPM+   +P++EQ+YG++SAYG Q   GR+M+P+ + T +DG IYVN+KQY
Sbjct: 90  ---FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQY 149

Query: 176 HGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSME 235
           HGIIRRRQ RAKA    KL+R RKPYMH SRHLHAMRRPRGSGGRFLNTK     K S  
Sbjct: 150 HGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADAAKQSKP 209

Query: 236 PNKIDDVNLSDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSL 277
            N            SQ S V   ++ T+N+  EA     S   S V+S+
Sbjct: 210 SN------------SQSSEVFHPENETINSSREANESNLS--DSAVTSM 235

[Close]

BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 3.7e-25
Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 125 NYPYMEQHYG--ILSAYGPQ-----------IPGRIMLPMSLTSDDGPIYVNAKQYHGII 184
           ++ Y + HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 185 RRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNL 220
           RRRQ RAK   +NKL R RKPY+HESRH+HA++RPRGSGGRFLNTK L
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240

[Close]

BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22
Identity = 62/142 (43.66%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 117 FGQPMICANYPYMEQHY---------------GI-LSAYGPQIPGRIMLPMSLTSDDGPI 176
           + +PM    YPY + +Y               G+ L   G Q PG   +P+   + + P+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 177 YVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK 236
           +VNAKQYHGI+RRRQ RAK    N+  + +KPYMHESRHLHA+RRPRG GGRFLN K  +
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK-E 163

Query: 237 NGKPSMEPNKIDDVNLSDSTGS 243
           NG    E     D N S+++ S
Sbjct: 164 NGDHKEEEEATSDENTSEASSS 181

[Close]

BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot
Match: Q9LNP6 (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22
Identity = 61/132 (46.21%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 125 NYPYMEQHYGIL--SAYGPQIP------GRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 184
           ++ Y + H+G L  +AY PQ         R+ LP  L  ++ P++VNAKQ+H I+RRRQ 
Sbjct: 132 SFHYADPHFGGLMPAAYLPQATIWNPQMTRVPLPFDLIENE-PVFVNAKQFHAIMRRRQQ 191

Query: 185 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNL 244
           RAK   +NKL + RKPY+HESRH+HA++RPRGSGGRFLNTK L+    S +P +   +  
Sbjct: 192 RAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQE---STDPKQDMPIQQ 251

Query: 245 SDSTGSQCSVVL 249
             +TG+    VL
Sbjct: 252 QHATGNMSRFVL 259

[Close]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL
Match: A0A1S3B7N7 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 PE=3 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 295/325 (90.77%), Postives = 309/325 (95.08%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTG LKEHE  +PNSLGQLS SPARLWS FGQG QSIFGDF QVKASSI+QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWSAFGQGPQSIFGDFGQVKASSIQQLGSNGK 60

Query: 61  EFNGTKQ-AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQ 120
           EFNGTKQ  +HGL+K+N APFSIYPGD K+SMDAQKPSP+FSLQSPL+EY NRFELGFGQ
Sbjct: 61  EFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           P+IC NYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KID+VNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEI 300
           TGSQCSVVLQS+SGTLN+PNEAKGRGFSL SSEVSS+FSRGLQRFQINHLGPS+PSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325

[Close]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL
Match: A0A0A0LE75 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.2e-168
Identity = 297/325 (91.38%), Postives = 309/325 (95.08%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTG LKEHE  +PNSLGQLS +PARLWS  GQGSQSIFGDF QVKASSI QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60

Query: 61  EFNGTKQ-AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQ 120
           EFNGTKQ  AHGL+K+N APFSIYPGD KISMDAQKPSP+FSLQSPL+EY NRFELGFGQ
Sbjct: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           P+ICANYPYM+QHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KID+VNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEI 300
           TGSQCSVVLQS+SGTLN+PNEAKGRGFSL SSEVSSLFSRGLQRFQINHLGPS+PSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 324

[Close]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL
Match: A0A6J1DDB6 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019330 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.5e-165
Identity = 290/328 (88.41%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS FGQGSQ+IFGDF Q+KASSIEQLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGK 60

Query: 61  EFNGTKQAA----HGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELG 120
           EF G KQAA    HGLEKVN APFSIYPGDCK S+DAQKPSP+FSLQSPLSEY  RFELG
Sbjct: 61  EFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELG 120

Query: 121 FGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 180
           FGQP+ICANYPYMEQHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQI
Sbjct: 121 FGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 180

Query: 181 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNL 240
           RAKAMMEN+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E  K+D+VNL
Sbjct: 181 RAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNL 240

Query: 241 SDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSL 300
           S+STGSQCSVVLQS+SGTLN+PNEAKGRGF+L SSEV S+FSRGLQRFQI+HL PSM SL
Sbjct: 241 SESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL 300

Query: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           AEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 328

[Close]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL
Match: A0A6J1F452 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111441949 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.2e-163
Identity = 290/330 (87.88%), Postives = 304/330 (92.12%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASS-IEQLGSNG 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS +GQG QS FGDF QVKASS I+QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSNG 60

Query: 61  KEFNGTKQ----AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFEL 120
           KEF GT+Q    AAHG EK+N APFSIYPGDCKIS+D QKPSPIFSLQSPLSEY NRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQPM+CANYPYMEQHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KI+D+N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDIN 240

Query: 241 LSDSTG-SQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMP 300
           LSDSTG SQCSVVLQS+SG LN+PN  KGRGFSL SSEVSS FSRGLQRFQINH GPSM 
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNGGKGRGFSLSSSEVSSTFSRGLQRFQINHFGPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL
Match: A0A6J1IY51 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111481693 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.6e-159
Identity = 285/330 (86.36%), Postives = 301/330 (91.21%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASS-IEQLGSNG 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS +GQG QS FGDF Q+KASS I+QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQLKASSTIQQLGSNG 60

Query: 61  KEFNGTKQ----AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFEL 120
           KEF GT+Q    AAHG EK+N APFSIYPGDCKIS+D QKPSPIFSLQSPLSEY NRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQPM+CANYPYMEQHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTK LKNGK SMEP KI+D+N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKALKNGKASMEPKKIEDMN 240

Query: 241 LSDSTG-SQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMP 300
           LSDSTG SQCSVVLQS+SG LN+PNE KGRGFSL SSEVSS+FSRGLQRFQINHLGPS  
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNEGKGRGFSLSSSEVSSMFSRGLQRFQINHLGPSRQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           S  EIIDGG HGMVLPKWVAAADNC DLCV
Sbjct: 301 SQTEIIDGGEHGMVLPKWVAAADNCYDLCV 330

[Close]

BLAST of Lsi03G018090 vs. NCBI nr
Match: XP_038906117.1 (nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906118.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_038906119.1 nuclear transcription factor Y subunit A-10-like [Benincasa hispida])

HSP 1 Score: 620.5 bits (1599), Expect = 7.9e-174
Identity = 304/324 (93.83%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS FGQGSQSIFGDF  VKASSIEQLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQSIFGDFGHVKASSIEQLGSNGK 60

Query: 61  EFNGTKQAAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQP 120
           EFNG+KQ AHG EK+N APFSIYPGDCKISMDAQKPSP+FSLQSPLSEY NRFELGFGQP
Sbjct: 61  EFNGSKQVAHGPEKLNTAPFSIYPGDCKISMDAQKPSPMFSLQSPLSEYHNRFELGFGQP 120

Query: 121 MICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180
           MICANYPYMEQHYGILSA+GPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA
Sbjct: 121 MICANYPYMEQHYGILSAFGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA 180

Query: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDST 240
           MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSME  KIDDVNLSDST
Sbjct: 181 MMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMELKKIDDVNLSDST 240

Query: 241 GSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEII 300
           GSQCSVVLQS+SGTLN+PNEAKGRGFSL SSEVSS+F RGLQRFQINHLGPSMPSLAEII
Sbjct: 241 GSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFPRGLQRFQINHLGPSMPSLAEII 300

Query: 301 DGGGHGMVLPKWVAAADNCCDLCV 325
           DGGGHGMVLPKWVAAADNCC+LCV
Sbjct: 301 DGGGHGMVLPKWVAAADNCCNLCV 324

[Close]

BLAST of Lsi03G018090 vs. NCBI nr
Match: XP_008442935.1 (PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442936.1 PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo])

HSP 1 Score: 602.4 bits (1552), Expect = 2.2e-168
Identity = 295/325 (90.77%), Postives = 309/325 (95.08%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTG LKEHE  +PNSLGQLS SPARLWS FGQG QSIFGDF QVKASSI+QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWSAFGQGPQSIFGDFGQVKASSIQQLGSNGK 60

Query: 61  EFNGTKQ-AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQ 120
           EFNGTKQ  +HGL+K+N APFSIYPGD K+SMDAQKPSP+FSLQSPL+EY NRFELGFGQ
Sbjct: 61  EFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           P+IC NYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KID+VNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEI 300
           TGSQCSVVLQS+SGTLN+PNEAKGRGFSL SSEVSS+FSRGLQRFQINHLGPS+PSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325

[Close]

BLAST of Lsi03G018090 vs. NCBI nr
Match: XP_004136716.1 (nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737692.1 nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737693.1 nuclear transcription factor Y subunit A-10 [Cucumis sativus] >KGN59224.1 hypothetical protein Csa_002154 [Cucumis sativus])

HSP 1 Score: 599.4 bits (1544), Expect = 1.9e-167
Identity = 297/325 (91.38%), Postives = 309/325 (95.08%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTG LKEHE  +PNSLGQLS +PARLWS  GQGSQSIFGDF QVKASSI QLGSNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWSALGQGSQSIFGDFGQVKASSI-QLGSNGK 60

Query: 61  EFNGTKQ-AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQ 120
           EFNGTKQ  AHGL+K+N APFSIYPGD KISMDAQKPSP+FSLQSPL+EY NRFELGFGQ
Sbjct: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180
           P+ICANYPYM+QHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDS 240
           AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KID+VNLSDS
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSLAEI 300
           TGSQCSVVLQS+SGTLN+PNEAKGRGFSL SSEVSSLFSRGLQRFQINHLGPS+PSLAEI
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAKGRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAEI 300

Query: 301 IDGGGHGMVLPKWVAAADNCCDLCV 325
           IDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 IDGGGHGMVLPKWVAAADNCCDLCV 324

[Close]

BLAST of Lsi03G018090 vs. NCBI nr
Match: XP_022151376.1 (nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377.1 nuclear transcription factor Y subunit A-10 [Momordica charantia])

HSP 1 Score: 591.3 bits (1523), Expect = 5.2e-165
Identity = 290/328 (88.41%), Postives = 308/328 (93.90%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASSIEQLGSNGK 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS FGQGSQ+IFGDF Q+KASSIEQLGSNGK
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWSAFGQGSQTIFGDFGQLKASSIEQLGSNGK 60

Query: 61  EFNGTKQAA----HGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFELG 120
           EF G KQAA    HGLEKVN APFSIYPGDCK S+DAQKPSP+FSLQSPLSEY  RFELG
Sbjct: 61  EFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFELG 120

Query: 121 FGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQI 180
           FGQP+ICANYPYMEQHYGILSAYGPQIPGR+MLPMSLT+DDGPIYVNAKQYHGIIRRRQI
Sbjct: 121 FGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQI 180

Query: 181 RAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNL 240
           RAKAMMEN+LARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLK+GK S+E  K+D+VNL
Sbjct: 181 RAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVNL 240

Query: 241 SDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMPSL 300
           S+STGSQCSVVLQS+SGTLN+PNEAKGRGF+L SSEV S+FSRGLQRFQI+HL PSM SL
Sbjct: 241 SESTGSQCSVVLQSESGTLNSPNEAKGRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQSL 300

Query: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           AEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 AEIIDGGGHGMVLPKWVAAADNCCDLCV 328

[Close]

BLAST of Lsi03G018090 vs. NCBI nr
Match: XP_022934917.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162
Identity = 290/330 (87.88%), Postives = 304/330 (92.12%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGTVPNSLGQLSSSPARLWSVFGQGSQSIFGDFSQVKASS-IEQLGSNG 60
           MAPQTGYLKEHEG VPNSLGQLSSSPARLWS +GQG QS FGDF QVKASS I+QLGSNG
Sbjct: 1   MAPQTGYLKEHEGVVPNSLGQLSSSPARLWSGYGQGCQSFFGDFGQVKASSTIQQLGSNG 60

Query: 61  KEFNGTKQ----AAHGLEKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEYQNRFEL 120
           KEF GT+Q    AAHG EK+N APFSIYPGDCKIS+D QKPSPIFSLQSPLSEY NRFEL
Sbjct: 61  KEFTGTEQALQVAAHGFEKLNTAPFSIYPGDCKISVDPQKPSPIFSLQSPLSEYHNRFEL 120

Query: 121 GFGQPMICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQ 180
           GFGQPM+CANYPYMEQHYGILSAY PQIPGRIMLPMSLT+DDGPIYVNAKQYHGIIRRR+
Sbjct: 121 GFGQPMVCANYPYMEQHYGILSAYAPQIPGRIMLPMSLTTDDGPIYVNAKQYHGIIRRRK 180

Query: 181 IRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVN 240
           IRAKAMMEN+LA+TRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGK SMEP KI+D+N
Sbjct: 181 IRAKAMMENRLAKTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKASMEPKKIEDIN 240

Query: 241 LSDSTG-SQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINHLGPSMP 300
           LSDSTG SQCSVVLQS+SG LN+PN  KGRGFSL SSEVSS FSRGLQRFQINH GPSM 
Sbjct: 241 LSDSTGSSQCSVVLQSESGALNSPNGGKGRGFSLSSSEVSSTFSRGLQRFQINHFGPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 325
           SLAEIIDGGGHGMVLPKWVAAADNCCDLCV
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLCV 330

[Close]

BLAST of Lsi03G018090 vs. TAIR 10
Match: AT3G05690.1 (nuclear factor Y, subunit A2 )

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-41
Identity = 130/326 (39.88%), Postives = 171/326 (52.45%), Query Frame = 0


Query: 20  GQLSSSPARLWSVFGQ---GSQSIFGDFSQVKASSIEQLGSNGKEFNGTKQAAHGLEKVN 79
           G  S+     W+ FG      +S+ GD        +  +G  G+  +    +A  L    
Sbjct: 9   GLFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATHL---- 68

Query: 80  IAPFSIYPGDCKISMDAQKP-SPIFSLQSPLSEYQNRFELGFGQPMICANYPYME-QHYG 139
              FS+  GD K      KP    FS+QSP        ELGF QP I   YPY E Q+YG
Sbjct: 69  --AFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 128

Query: 140 ILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKA---MMENKL-ARTR 199
           ++SAYG Q   R+MLP+++ ++D  IYVN+KQYHGIIRRRQ RAKA   + + KL +R R
Sbjct: 129 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 188

Query: 200 KPYMHESRHLHAMRRPRGSGGRFLNTK---------NLKNGKPSMEPNKIDDVNLSDSTG 259
           KPYMH SRHLHA+RRPRGSGGRFLNTK         N K G  SM+   I        + 
Sbjct: 189 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQ---IQSQPKPQQSN 248

Query: 260 SQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSLFSRGLQRFQINH-LGPSMPSLAEII 319
           SQ S V+  ++GT+N  N     G ++  SEV+S+          N+ L   + SL    
Sbjct: 249 SQNSEVVHPENGTMNLSN-----GLNVSGSEVTSM----------NYFLSSPVHSLG--- 292

Query: 320 DGGGHGMVLP-KWVAAA----DNCCD 322
                GMV+P KW+AAA    + CC+
Sbjct: 309 -----GMVMPSKWIAAAAAMDNGCCN 292

[Close]

BLAST of Lsi03G018090 vs. TAIR 10
Match: AT5G06510.1 (nuclear factor Y, subunit A10 )

HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41
Identity = 105/229 (45.85%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 56  GSNGKEFNGTK----QAAHGL--EKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEY 115
           G     F G K    +A  G+  ++ +   F+  PG  K S D  KP   F++QS     
Sbjct: 30  GEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRDVPKPHVAFAMQSAC--- 89

Query: 116 QNRFELGFGQPMICANYPYMEQHYGILSAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQY 175
              FE GF QPM+   +P++EQ+YG++SAYG Q   GR+M+P+ + T +DG IYVN+KQY
Sbjct: 90  ---FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQY 149

Query: 176 HGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSME 235
           HGIIRRRQ RAKA    KL+R RKPYMH SRHLHAMRRPRGSGGRFLNTK     K S  
Sbjct: 150 HGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADAAKQSKP 209

Query: 236 PNKIDDVNLSDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSL 277
            N            SQ S V   ++ T+N+  EA     S   S V+S+
Sbjct: 210 SN------------SQSSEVFHPENETINSSREANESNLS--DSAVTSM 235

[Close]

BLAST of Lsi03G018090 vs. TAIR 10
Match: AT5G06510.2 (nuclear factor Y, subunit A10 )

HSP 1 Score: 166.4 bits (420), Expect = 3.8e-41
Identity = 105/229 (45.85%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 56  GSNGKEFNGTK----QAAHGL--EKVNIAPFSIYPGDCKISMDAQKPSPIFSLQSPLSEY 115
           G     F G K    +A  G+  ++ +   F+  PG  K S D  KP   F++QS     
Sbjct: 30  GEASDSFTGVKAVTTEAEQGVVDKQTSTTLFTFSPGGEKSSRDVPKPHVAFAMQSAC--- 89

Query: 116 QNRFELGFGQPMICANYPYMEQHYGILSAYGPQ-IPGRIMLPMSL-TSDDGPIYVNAKQY 175
              FE GF QPM+   +P++EQ+YG++SAYG Q   GR+M+P+ + T +DG IYVN+KQY
Sbjct: 90  ---FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRSSGRVMIPLKMETEEDGTIYVNSKQY 149

Query: 176 HGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKPSME 235
           HGIIRRRQ RAKA    KL+R RKPYMH SRHLHAMRRPRGSGGRFLNTK     K S  
Sbjct: 150 HGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADAAKQSKP 209

Query: 236 PNKIDDVNLSDSTGSQCSVVLQSDSGTLNTPNEAKGRGFSLLSSEVSSL 277
            N            SQ S V   ++ T+N+  EA     S   S V+S+
Sbjct: 210 SN------------SQSSEVFHPENETINSSREANESNLS--DSAVTSM 235

[Close]

BLAST of Lsi03G018090 vs. TAIR 10
Match: AT5G06510.3 (nuclear factor Y, subunit A10 )

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-39
Identity = 97/194 (50.00%), Postives = 119/194 (61.34%), Query Frame = 0


Query: 85  GDCKISMDAQKPSPIFSLQSPLSEYQNRFELGFGQPMICANYPYMEQHYGILSAYGPQ-I 144
           G  K S D  KP   F++QS        FE GF QPM+   +P++EQ+YG++SAYG Q  
Sbjct: 16  GGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRS 75

Query: 145 PGRIMLPMSL-TSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHA 204
            GR+M+P+ + T +DG IYVN+KQYHGIIRRRQ RAKA    KL+R RKPYMH SRHLHA
Sbjct: 76  SGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHA 135

Query: 205 MRRPRGSGGRFLNTKNLKNGKPSMEPNKIDDVNLSDSTGSQCSVVLQSDSGTLNTPNEAK 264
           MRRPRGSGGRFLNTK     K S   N            SQ S V   ++ T+N+  EA 
Sbjct: 136 MRRPRGSGGRFLNTKTADAAKQSKPSN------------SQSSEVFHPENETINSSREAN 186

Query: 265 GRGFSLLSSEVSSL 277
               S   S V+S+
Sbjct: 196 ESNLS--DSAVTSM 186

[Close]

BLAST of Lsi03G018090 vs. TAIR 10
Match: AT1G72830.1 (nuclear factor Y, subunit A3 )

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-26
Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 125 NYPYMEQHYG--ILSAYGPQ-----------IPGRIMLPMSLTSDDGPIYVNAKQYHGII 184
           ++ Y + HYG  + + Y PQ           IPGR+ LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 185 RRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNL 220
           RRRQ RAK   +NKL R RKPY+HESRH+HA++RPRGSGGRFLNTK L
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240

The following BLAST results are available for this feature:

BLAST of Lsi03G018090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X4	4.1e-40	39.88	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8LFU0	5.4e-40	45.85	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
Q93ZH2	3.7e-25	56.48	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.0e-22	43.66	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LNP6	3.0e-22	46.21	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Lsi03G018090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7N7	1.1e-168	90.77	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 P...	[more]
A0A0A0LE75	9.2e-168	91.38	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G78271...	[more]
A0A6J1DDB6	2.5e-165	88.41	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1F452	5.2e-163	87.88	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IY51	4.6e-159	86.36	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114816...	[more]

BLAST of Lsi03G018090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906117.1	7.9e-174	93.83	nuclear transcription factor Y subunit A-10-like [Benincasa hispida] >XP_0389061...	[more]
XP_008442935.1	2.2e-168	90.77	PREDICTED: nuclear transcription factor Y subunit A-10 [Cucumis melo] >XP_008442...	[more]
XP_004136716.1	1.9e-167	91.38	nuclear transcription factor Y subunit A-10 [Cucumis sativus] >XP_031737692.1 nu...	[more]
XP_022151376.1	5.2e-165	88.41	nuclear transcription factor Y subunit A-10 [Momordica charantia] >XP_022151377....	[more]
XP_022934917.1	1.1e-162	87.88	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]

BLAST of Lsi03G018090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05690.1	2.9e-41	39.88	nuclear factor Y, subunit A2	[more]
AT5G06510.1	3.8e-41	45.85	nuclear factor Y, subunit A10	[more]
AT5G06510.2	3.8e-41	45.85	nuclear factor Y, subunit A10	[more]
AT5G06510.3	1.6e-39	50.00	nuclear factor Y, subunit A10	[more]
AT1G72830.1	2.7e-26	56.48	nuclear factor Y, subunit A3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 190..213 score: 80.32 coord: 159..181 score: 68.84
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 155..216 e-value: 1.7E-34 score: 130.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 159..213 e-value: 8.9E-26 score: 90.3
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 4..322
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 156..216 score: 35.928066
None	No IPR available	GENE3D	6.10.250.2430		coord: 157..217 e-value: 4.7E-30 score: 105.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..230
None	No IPR available	PANTHER	PTHR12632:SF39	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10	coord: 4..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G018090.1	Lsi03G018090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity