Homology
BLAST of Lsi03G017990 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 8.9e-51
Identity = 159/648 (24.54%), Postives = 298/648 (45.99%), Query Frame = 0
Query: 64 KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 123
K L+ N+++ +E+F Q G+ + Y I KLG +G + ++R + +EG
Sbjct: 83 KLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI 142
Query: 124 SGVEEVIVTLVNAFVRHGRTREALRVLPHI-SLVGLKPSVETFNVVLAVFVEENRDIQEV 183
E + ++++ + + G + R++ + ++ +P+ +++NVVL + V N +
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVA 202
Query: 184 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNG 243
V+ +M+ I P + T ++ A +I +A++ R M+K GC+PNS ++ L++
Sbjct: 203 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 262
Query: 244 LITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPV 303
L + V+EA+ +L M+ +GC D + I C+ DRI+ + + M P
Sbjct: 263 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 322
Query: 304 TLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVD 363
+ Y L+ LCK +D A L + + PE ++ ++I F G+ D+A +
Sbjct: 323 DITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLS 382
Query: 364 DRCAFY-----TASHNALLEGCSDAGKISLANCILGEMSKMNIDDCK----SWNIVIGWL 423
D Y ++N+L+ G G + LA +L +M CK S+ I++
Sbjct: 383 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGF 442
Query: 424 CNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNA 483
C +I A+ L +M PN + LI CK R A+++ E+ + +
Sbjct: 443 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 502
Query: 484 GCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQL 543
++ LI GLC+ + A + M + ++TLI G I E L+
Sbjct: 503 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 562
Query: 544 ACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNR 603
+ G+ +TY S++ L ++ + + + +ML G++ + + ILI+
Sbjct: 563 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 622
Query: 604 VKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNL 663
V+E++ MV G PD L + ++ T KL +T T+N
Sbjct: 623 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 682
Query: 664 LINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDR 702
L++ L K ++AC LLD +E G+VP+ T +L+ S++ ++T DR
Sbjct: 683 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
BLAST of Lsi03G017990 vs. ExPASy Swiss-Prot
Match:
Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)
HSP 1 Score: 196.1 bits (497), Expect = 1.4e-48
Identity = 169/630 (26.83%), Postives = 283/630 (44.92%), Query Frame = 0
Query: 76 VEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCR--DLVNEGCSGVEEVIVTL 135
+++F LA KG F + T + L E ++ C D+V +G S + T
Sbjct: 224 LDVFPVLA-NKGMFPSKTTCNILLTSL---VRANEFQKCCEAFDVVCKGVSPDVYLFTTA 283
Query: 136 VNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKE-MVKA 195
+NAF + G+ EA+++ + G+ P+V TFN V+ R + F++KE MV+
Sbjct: 284 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEKMVER 343
Query: 196 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 255
G+ P + T + L+ L A++I A + M+KKG PN + L++ I +++A
Sbjct: 344 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 403
Query: 256 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 315
+ + +M G L S Y I +C+ + D L + M + ++++I
Sbjct: 404 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 463
Query: 316 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAI----KFVDDRCAFY 375
LC +L D AL + EM+ + P + ++I + GK +A+ +F++
Sbjct: 464 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 523
Query: 376 TASHNALLEGCSDAGKISLANCILGE-MSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLG 435
T + NALL G +AGK+ A I E + + + D S+N +I C ++ AF FL
Sbjct: 524 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 583
Query: 436 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 495
+M+ P+ TY+ LI G + E A+Q ++ + + YS +I+G C+A
Sbjct: 584 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 643
Query: 496 RTLEAAEVFC-YMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTY 555
RT E E F MSKN P TV Y
Sbjct: 644 RTEEGQEFFDEMMSKNVQP------------------------------------NTVVY 703
Query: 556 ASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVY 615
++ +S + + L + M G S N TY LI S ++RV+E+ LLF M
Sbjct: 704 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 763
Query: 616 EGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHE 675
EGL P+ L Q+ + + ++ + N TY ++I G ++ E
Sbjct: 764 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 811
Query: 676 ACKLLDSMLEKGWVPDAMTHGLLIGSLVKE 697
A +LL+ M EKG VPD++T+ I +K+
Sbjct: 824 ASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811
BLAST of Lsi03G017990 vs. ExPASy Swiss-Prot
Match:
Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 4.3e-45
Identity = 144/543 (26.52%), Postives = 243/543 (44.75%), Query Frame = 0
Query: 156 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 215
+G+ ++ T+++++ F ++ + L V +M+K G P++ TLN LL H +I
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169
Query: 216 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 275
A++ +M + G P+S TF L++GL + EAV ++ M GC+ DL Y +
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229
Query: 276 SLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLM 335
+ C+ ID+ L + M+ I P +IY+T+I +LC ++++AL L EM G+
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289
Query: 336 PEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFYTASHNALLEGCSDAGKISLANCI 395
P Y S+I+ G+ +A + + D + + +AL++ GK+ A +
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349
Query: 396 LGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCK 455
EM K +ID D +++ +I C + R+ A MI PN TY LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409
Query: 456 SKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSL 515
+KR + ++L E+ R + N Y+ LI G QA A VF M +
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469
Query: 516 FDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQML 575
+ L+ G+C+ G ++ LV+ + + TY ++ + K+ K E + +
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529
Query: 576 VLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLH 635
+ G N+ TY ++ F +E+ LF M EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS----------------- 589
Query: 636 MISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLI 694
TYN LI ++ K + +L+ M +V DA T GL+
Sbjct: 590 ------------------GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVT 616
BLAST of Lsi03G017990 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.6e-44
Identity = 159/658 (24.16%), Postives = 292/658 (44.38%), Query Frame = 0
Query: 40 NQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNL---NSEVEIFKCLAIQKGFFQTVQTYY 99
N P S S ++S+ VK LD+ ++ ++ + +F + + F Y
Sbjct: 28 NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87
Query: 100 ETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLP-HISL 159
E +L+LG G+ ++M++ D+ + C + L+ ++ + E L V+ I
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 160 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 219
GLKP +N +L + V+ N ++ V + +M GI P+V T N L+ AL A Q++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 207
Query: 220 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 279
A+ M G +P+ KTF ++ G I + +D A+ + M + GC +
Sbjct: 208 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 267
Query: 280 SLFCREDRI-DVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGL 339
FC+E R+ D +++ M P ++TL+ LCK + A+ +++ M++ G
Sbjct: 268 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 327
Query: 340 MPEDNVYVSIIKAFFELGKTDEAIKFVDDR----CAFYTASHNALLEGCSDAGKISLANC 399
P+ Y S+I +LG+ EA++ +D C+ T ++N L+ ++ A
Sbjct: 328 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 387
Query: 400 ILGEM-SKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNC 459
+ + SK + D ++N +I LC A E +M P+E TY LI C
Sbjct: 388 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 447
Query: 460 KSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPS 519
+ + AL ++ ++ + Y+ LI+G C+AN+T EA E+F M + +
Sbjct: 448 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 507
Query: 520 LFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQM 579
++TLI G+C +++ L+ G TY S++ + + ++ M
Sbjct: 508 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 567
Query: 580 LVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEG--LLPDSER--LYDLFLCIAN 639
G ++ TY LI RV+ + L + +G L P + + LF
Sbjct: 568 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 627
Query: 640 HSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRK-HEACKLLDSMLEKGWVPD 683
+++ +++ D V +Y ++ GL EA L +LEKG+VP+
Sbjct: 628 TEAINLFREMLEQNEAPPDAV---SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
BLAST of Lsi03G017990 vs. ExPASy Swiss-Prot
Match:
Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 1.1e-43
Identity = 144/568 (25.35%), Postives = 254/568 (44.72%), Query Frame = 0
Query: 133 LVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKA 192
L++A + + + + + +G+ + T+++ + F ++ + L V +M+K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ-LSLALAVLAKMMKL 148
Query: 193 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 252
G P++ TL+ LL H+++I A+ +M + G P++ TF L++GL + EA
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 208
Query: 253 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 312
V ++ M + GC+ DL Y ++ C+ ID+ L + M+ I +IY+T+I
Sbjct: 209 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 268
Query: 313 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFY 372
LCK +D+AL L EM G+ P+ Y S+I G+ +A + + D +
Sbjct: 269 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 328
Query: 373 TASHNALLEGCSDAGKISLANCILGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLG 432
+ +AL++ GK+ A + EM K +ID D +++ +I C + R+ A
Sbjct: 329 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 388
Query: 433 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 492
MI PN TY+ LI G CK+KR E ++L E+ R + N Y+ LI G QA
Sbjct: 389 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 448
Query: 493 RTLEAAEVFCYMSKNRYPLHPSL--FDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVT 552
A VF M +HP++ ++ L+ G+C G + + +V+ + + T
Sbjct: 449 DCDNAQMVFKQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 508
Query: 553 YASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMV 612
Y ++ + K+ K E + + + G S N+ Y +I F +E+ L M
Sbjct: 509 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 568
Query: 613 YEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKH 672
+G LP N+ TYN LI ++ +
Sbjct: 569 EDGPLP-----------------------------------NSGTYNTLIRARLRDGDRE 618
Query: 673 EACKLLDSMLEKGWVPDAMTHGLLIGSL 694
+ +L+ M G+ DA T GL+ L
Sbjct: 629 ASAELIKEMRSCGFAGDASTIGLVTNML 618
BLAST of Lsi03G017990 vs. ExPASy TrEMBL
Match:
A0A0A0LE83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782810 PE=4 SV=1)
HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 653/728 (89.70%), Postives = 694/728 (95.33%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV+PNSCLSPILSGIHVDTFLENNQNCPR KQSTQFLSDKSVSN
Sbjct: 1 MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60
Query: 61 ---NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
NSVKGLD DKNLNSEVEIFK LAIQKG FQ+VQTYYETILKLGLDGNIEEME TCRD
Sbjct: 61 NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120
Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
LVNEGCSGVEEVIVTLVN VR GR REALRVLPHISLVGL+PSVETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180
Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240
Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
VL+NGLITK+LVDEAVLVLGIMYKI C+L LSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300
Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
NIVP TLIYSTLIQSLCK+LSLD+ALFLLEEMVE+GL+PE++VYVSI++ FFELGKTDEA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360
Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420
Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
+IGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYEAALQLMNEVH+RCWILNAGCYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480
Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIKGMCDLG++DE LVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540
Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
GTSCK+VTYASI+HELSKSNKAE LLVLSQMLVLG +L+LETYYILIHSFS++NRVKES
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600
Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
ILLFNHMV E LLPDSERLYDLFLCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660
Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGD++LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720
Query: 721 LVEGLGNS 726
LVEGLGNS
Sbjct: 721 LVEGLGNS 728
BLAST of Lsi03G017990 vs. ExPASy TrEMBL
Match:
A0A5A7TKH0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004810 PE=4 SV=1)
HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 637/728 (87.50%), Postives = 683/728 (93.82%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV+PNS LSPILSGIHVDT LENNQNCPR KQSTQF SDKSV+N
Sbjct: 1 MAARLMPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTN 60
Query: 61 ---NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
NSVKGLD DK LNSEVEIFKCLAIQKGFF+TVQTYYETI+KLGL+GNI+EMERTCRD
Sbjct: 61 NSVNSVKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRD 120
Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
LVNEGCSGVEE+IV+LVN VR GR REAL V PHIS VGL+PSVETFNVVLAVFVEE+R
Sbjct: 121 LVNEGCSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDR 180
Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
DIQEVLFVYKEMVKAGIVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240
Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
VL+N LITK+LVDEAVLVLGIMYK C+LDLSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNALITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300
Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
NIVP TLIY+TLIQSLCK+LSLD+ALFLLEEMVESGL+PE++VYVSII+ FFELGKTDEA
Sbjct: 301 NIVPGTLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEA 360
Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420
Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYE ALQLMNEVH++CWILNAGCYS
Sbjct: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYS 480
Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIK MCDLG++DETLVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYA 540
Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
GTSCKTVTYASI+HELSK+NKA LLVLSQMLVLG +L+LETYYILIHSFS++NRV ES
Sbjct: 541 GTSCKTVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNES 600
Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
ILLFN MV E LLPDSE LY+L LCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNCMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660
Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGDR+LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDNVSSI 720
Query: 721 LVEGLGNS 726
LVEGLGNS
Sbjct: 721 LVEGLGNS 728
BLAST of Lsi03G017990 vs. ExPASy TrEMBL
Match:
A0A1S3B7Q0 (pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486701 PE=4 SV=1)
HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 637/728 (87.50%), Postives = 683/728 (93.82%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV+PNS LSPILSGIHVDT LENNQNCPR KQSTQF SDKSV+N
Sbjct: 1 MAARLMPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTN 60
Query: 61 ---NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
NSVKGLD DK LNSEVEIFKCLAIQKGFF+TVQTYYETI+KLGL+GNI+EMERTCRD
Sbjct: 61 NSVNSVKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRD 120
Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
LVNEGCSGVEE+IV+LVN VR GR REAL V PHIS VGL+PSVETFNVVLAVFVEE+R
Sbjct: 121 LVNEGCSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDR 180
Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
DIQEVLFVYKEMVKAGIVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240
Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
VL+N LITK+LVDEAVLVLGIMYK C+LDLSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNALITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300
Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
NIVP TLIY+TLIQSLCK+LSLD+ALFLLEEMVESGL+PE++VYVSII+ FFELGKTDEA
Sbjct: 301 NIVPGTLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEA 360
Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420
Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYE ALQLMNEVH++CWILNAGCYS
Sbjct: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYS 480
Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIK MCDLG++DETLVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYA 540
Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
GTSCKTVTYASI+HELSK+NKA LLVLSQMLVLG +L+LETYYILIHSFS++NRV ES
Sbjct: 541 GTSCKTVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNES 600
Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
ILLFN MV E LLPDSE LY+L LCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNCMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660
Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGDR+LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDNVSSI 720
Query: 721 LVEGLGNS 726
LVEGLGNS
Sbjct: 721 LVEGLGNS 728
BLAST of Lsi03G017990 vs. ExPASy TrEMBL
Match:
A0A6J1FJ39 (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111445820 PE=4 SV=1)
HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 621/725 (85.66%), Postives = 668/725 (92.14%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV PNSCLSPILSG +VD+FLENNQ+ PR ++STQ L++K V N
Sbjct: 1 MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
Query: 61 NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVN 120
NSVKGLDN+ NLNSEVEIFKCLAIQKGF TVQTYY TILK GLDGN+EEM+RTC+DLV
Sbjct: 61 NSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVK 120
Query: 121 EGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQ 180
+GC GVEEVIVTLVNAFVRHGRTREALRVLPH++LVGLKPS+ETFNVVLAVFVEENRDI+
Sbjct: 121 DGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIE 180
Query: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLL 240
EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGC+PNSKTFE+LL
Sbjct: 181 EVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILL 240
Query: 241 NGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIV 300
NGLIT++LVDEAVL LGI+YKIGC+LDLSFYTCA+SLFCR DRIDVGSWLFRMMKASNI+
Sbjct: 241 NGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNII 300
Query: 301 PVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKF 360
P TLIYSTLIQSLCKNL LDEA FLLEEMVESGLMPEDNVYVSIIK FFELGKTDEAIKF
Sbjct: 301 PDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKF 360
Query: 361 VDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIG 420
V DRC +T+ HNALLEGC + G I +AN +LG+MSKM+IDDCKSWNIVIGWLCNNARIG
Sbjct: 361 VKDRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIG 420
Query: 421 NAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELI 480
AFEFLGKMIVLSFVPN+DTYAALI+GNCKS+RYEAALQLMNEVHARCW+L+AGCYSELI
Sbjct: 421 KAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELI 480
Query: 481 EGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTS 540
E LCQA RTLEAAEVFCYMSKNRYPLHPSLFDTLIKG+CDLG+IDE LVLLQLACYAGTS
Sbjct: 481 ESLCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTS 540
Query: 541 CKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILL 600
CKTVTYASI++ELSKSNKAEI LLVLSQMLVLGYSLNLETY I IHSF AMNRVK+SI L
Sbjct: 541 CKTVTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITL 600
Query: 601 FNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
FN MV EGLLPDSERL+DL LCIA+HSQLHMI TTIDKLI HTDLVNTATYNLLINGLWK
Sbjct: 601 FNRMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWK 660
Query: 661 EDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVE 720
EDRK+EACKLLDSMLEKGWVPDA THGLLIGSLV NE+SVIEDNVSSILVE
Sbjct: 661 EDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLV----------NENSVIEDNVSSILVE 715
Query: 721 GLGNS 726
GLGN+
Sbjct: 721 GLGNT 715
BLAST of Lsi03G017990 vs. ExPASy TrEMBL
Match:
A0A6J1L2T0 (pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498598 PE=4 SV=1)
HSP 1 Score: 1217.2 bits (3148), Expect = 0.0e+00
Identity = 615/725 (84.83%), Postives = 662/725 (91.31%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV PNSCLSPILSG +VD+FLENNQ+ PR ++STQ L++K V N
Sbjct: 1 MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
Query: 61 NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVN 120
NSVKGLDN+ NLNSEVEIFKCLAIQKGF TVQTYY TILK GLDGN+EEM+RTC+DLV
Sbjct: 61 NSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVK 120
Query: 121 EGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQ 180
+GC GVEEVIVTLVNAFVRHGRTREALRVLPH++LVGLKPS+ETFNVVLAVFVEENRDI+
Sbjct: 121 DGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIE 180
Query: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLL 240
EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGC+PNSKTFEVLL
Sbjct: 181 EVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEVLL 240
Query: 241 NGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIV 300
NGLIT++LVDEAVL LGI+YKIGC+LDLSFYTCA+SLFCR DRIDVGSWLFRMMKASNI+
Sbjct: 241 NGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNII 300
Query: 301 PVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKF 360
P TLIYSTLIQSLCKNL LDEALFLLEEM ESGL P+D+VYV IIK FFELGKT EAIKF
Sbjct: 301 PDTLIYSTLIQSLCKNLLLDEALFLLEEMAESGLRPKDDVYVGIIKVFFELGKTGEAIKF 360
Query: 361 VDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIG 420
V DRC +T+ HNALLEGC + I +AN +LG MSKM+IDDCKSWNIVIGWLCNNARIG
Sbjct: 361 VKDRCFLFTSPHNALLEGCCNVENILIANRVLGRMSKMSIDDCKSWNIVIGWLCNNARIG 420
Query: 421 NAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELI 480
AFEFLGKMIVLSFVPN+DTYAALI+GNCKS+RYEAALQLMNEVHARCW+L+A CYSELI
Sbjct: 421 KAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAVCYSELI 480
Query: 481 EGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTS 540
E LCQA RTLEAAEVFCYMSKN+YPLHPSLFDTLIKG+CDLG+IDE LVLLQLACYAGTS
Sbjct: 481 ESLCQAKRTLEAAEVFCYMSKNKYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTS 540
Query: 541 CKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILL 600
CKT+TYASI++ELSKSNKAEI LLVLSQMLVLGYSLNLETY I IHSF AMNRVK+SI L
Sbjct: 541 CKTMTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITL 600
Query: 601 FNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
FN MV EGLLPDSERLYDL LCIA+HSQLHMI TTIDKLI HTDLVNTATYNLLINGLWK
Sbjct: 601 FNRMVNEGLLPDSERLYDLLLCIADHSQLHMILTTIDKLIEHTDLVNTATYNLLINGLWK 660
Query: 661 EDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVE 720
EDRK+EACKLLDSMLEKGWVPDAMTHGLLIGSLV NE SVIEDNVSSILVE
Sbjct: 661 EDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLV----------NESSVIEDNVSSILVE 715
Query: 721 GLGNS 726
GLGN+
Sbjct: 721 GLGNT 715
BLAST of Lsi03G017990 vs. NCBI nr
Match:
XP_038904717.1 (pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like [Benincasa hispida] >XP_038904718.1 pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like [Benincasa hispida] >XP_038904719.1 pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 1312.0 bits (3394), Expect = 0.0e+00
Identity = 663/725 (91.45%), Postives = 692/725 (95.45%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTLVKK LKG+I NSCLSP+LSGIHVDTFLEN QNC RSKQSTQFLSDKSVSN
Sbjct: 1 MAARLMPSTLVKKFLKGIIRNSCLSPVLSGIHVDTFLENMQNCSRSKQSTQFLSDKSVSN 60
Query: 61 NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVN 120
+SVKGLDNDK LNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDG+IEEMERTCRDLV
Sbjct: 61 SSVKGLDNDKYLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGDIEEMERTCRDLVK 120
Query: 121 EGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQ 180
+GCSGVEEVIVTLVNAFVR GRTREAL VL HI+LVGLKPS+ETFNVVLAVFVEENRDIQ
Sbjct: 121 DGCSGVEEVIVTLVNAFVRRGRTREALGVLSHINLVGLKPSIETFNVVLAVFVEENRDIQ 180
Query: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLL 240
EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGC PNSKTFEVLL
Sbjct: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCSPNSKTFEVLL 240
Query: 241 NGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIV 300
NGLITK+LVDEAVLVLGIMYKI CKLDLSFYT AISLFCREDRIDVGSWLFRMMKASNIV
Sbjct: 241 NGLITKNLVDEAVLVLGIMYKIRCKLDLSFYTYAISLFCREDRIDVGSWLFRMMKASNIV 300
Query: 301 PVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKF 360
P+ IYSTLIQSLCKNLSLDEALFLLEEMVESGLMPE+NVYVSIIK FFELGKTDEAIKF
Sbjct: 301 PIAFIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEENVYVSIIKVFFELGKTDEAIKF 360
Query: 361 VDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIG 420
V+DRCAFYT+ HNALLEGCS+AGKI LANCIL +MSKMNIDDCKSWNIVIGWLCNNARIG
Sbjct: 361 VEDRCAFYTSPHNALLEGCSNAGKILLANCILVKMSKMNIDDCKSWNIVIGWLCNNARIG 420
Query: 421 NAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELI 480
+AFEFL KMIV SFVPNEDTYAALIVGNCKS+RYEAALQLMNEVHARCWILNAGCYSELI
Sbjct: 421 SAFEFLSKMIVSSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHARCWILNAGCYSELI 480
Query: 481 EGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTS 540
EGLCQA+RTLEAAEVFCYMSKNRYPLHPS+FD L+KGMCDLG++DE LVLLQLACYAGTS
Sbjct: 481 EGLCQAHRTLEAAEVFCYMSKNRYPLHPSVFDMLVKGMCDLGHVDEALVLLQLACYAGTS 540
Query: 541 CKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILL 600
CKT+TYASIMHELSKSNK E LLVLSQMLVLGYSLN+ETYYILI SFSAMNRVKESILL
Sbjct: 541 CKTLTYASIMHELSKSNKVEFVLLVLSQMLVLGYSLNMETYYILIRSFSAMNRVKESILL 600
Query: 601 FNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
FN M+ EGLLPDSE LYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK
Sbjct: 601 FNRMINEGLLPDSEGLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
Query: 661 EDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVE 720
EDRK+EACKLLDSMLEKGWVPDAMTHGLLIGSL +EKTGDR+ INE+S IEDN+SSILVE
Sbjct: 661 EDRKYEACKLLDSMLEKGWVPDAMTHGLLIGSLFQEKTGDRV-INENSTIEDNISSILVE 720
Query: 721 GLGNS 726
GLGNS
Sbjct: 721 GLGNS 724
BLAST of Lsi03G017990 vs. NCBI nr
Match:
XP_004136720.1 (pentatricopeptide repeat-containing protein At1g62914, mitochondrial [Cucumis sativus] >XP_031738965.1 pentatricopeptide repeat-containing protein At1g62914, mitochondrial [Cucumis sativus] >KGN59234.1 hypothetical protein Csa_001959 [Cucumis sativus])
HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 653/728 (89.70%), Postives = 694/728 (95.33%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV+PNSCLSPILSGIHVDTFLENNQNCPR KQSTQFLSDKSVSN
Sbjct: 1 MAARLMPSTLMKKFLKGVVPNSCLSPILSGIHVDTFLENNQNCPRLKQSTQFLSDKSVSN 60
Query: 61 ---NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
NSVKGLD DKNLNSEVEIFK LAIQKG FQ+VQTYYETILKLGLDGNIEEME TCRD
Sbjct: 61 NSVNSVKGLDYDKNLNSEVEIFKSLAIQKGIFQSVQTYYETILKLGLDGNIEEMEMTCRD 120
Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
LVNEGCSGVEEVIVTLVN VR GR REALRVLPHISLVGL+PSVETFNVVLAV VEE+R
Sbjct: 121 LVNEGCSGVEEVIVTLVNTLVRRGRVREALRVLPHISLVGLRPSVETFNVVLAVLVEEDR 180
Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240
Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
VL+NGLITK+LVDEAVLVLGIMYKI C+L LSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNGLITKNLVDEAVLVLGIMYKIRCELHLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300
Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
NIVP TLIYSTLIQSLCK+LSLD+ALFLLEEMVE+GL+PE++VYVSI++ FFELGKTDEA
Sbjct: 301 NIVPGTLIYSTLIQSLCKSLSLDKALFLLEEMVENGLIPEESVYVSIVEVFFELGKTDEA 360
Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420
Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
+IGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYEAALQLMNEVH+RCWILNAGCYS
Sbjct: 421 KIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEAALQLMNEVHSRCWILNAGCYS 480
Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIKGMCDLG++DE LVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKGMCDLGHVDEALVLLQLASYA 540
Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
GTSCK+VTYASI+HELSKSNKAE LLVLSQMLVLG +L+LETYYILIHSFS++NRVKES
Sbjct: 541 GTSCKSVTYASIIHELSKSNKAETALLVLSQMLVLGCNLDLETYYILIHSFSSINRVKES 600
Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
ILLFNHMV E LLPDSERLYDLFLCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660
Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGD++LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVSSI 720
Query: 721 LVEGLGNS 726
LVEGLGNS
Sbjct: 721 LVEGLGNS 728
BLAST of Lsi03G017990 vs. NCBI nr
Match:
XP_008442951.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like [Cucumis melo] >KAA0043792.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25342.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 637/728 (87.50%), Postives = 683/728 (93.82%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV+PNS LSPILSGIHVDT LENNQNCPR KQSTQF SDKSV+N
Sbjct: 1 MAARLMPSTLMKKFLKGVVPNSRLSPILSGIHVDTSLENNQNCPRLKQSTQFSSDKSVTN 60
Query: 61 ---NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRD 120
NSVKGLD DK LNSEVEIFKCLAIQKGFF+TVQTYYETI+KLGL+GNI+EMERTCRD
Sbjct: 61 NSVNSVKGLDYDKKLNSEVEIFKCLAIQKGFFETVQTYYETIVKLGLNGNIDEMERTCRD 120
Query: 121 LVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENR 180
LVNEGCSGVEE+IV+LVN VR GR REAL V PHIS VGL+PSVETFNVVLAVFVEE+R
Sbjct: 121 LVNEGCSGVEEIIVSLVNTLVRRGRAREALWVFPHISSVGLRPSVETFNVVLAVFVEEDR 180
Query: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFE 240
DIQEVLFVYKEMVKAGIVPNVDTLNFL AALFHAEQIKTAMNQFRRM KKGC PNSKTFE
Sbjct: 181 DIQEVLFVYKEMVKAGIVPNVDTLNFLFAALFHAEQIKTAMNQFRRMRKKGCSPNSKTFE 240
Query: 241 VLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKAS 300
VL+N LITK+LVDEAVLVLGIMYK C+LDLSFYTCAISLFCREDRIDVGSWLF MMKAS
Sbjct: 241 VLVNALITKNLVDEAVLVLGIMYKSQCELDLSFYTCAISLFCREDRIDVGSWLFTMMKAS 300
Query: 301 NIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEA 360
NIVP TLIY+TLIQSLCK+LSLD+ALFLLEEMVESGL+PE++VYVSII+ FFELGKTDEA
Sbjct: 301 NIVPGTLIYNTLIQSLCKSLSLDKALFLLEEMVESGLIPEESVYVSIIEVFFELGKTDEA 360
Query: 361 IKFVDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNA 420
IKFV+DRCAFYT+ HNALLEGC++AGKI LANCILG+MSKMNIDDCKSWNIVIGWLCNNA
Sbjct: 361 IKFVEDRCAFYTSPHNALLEGCTNAGKILLANCILGKMSKMNIDDCKSWNIVIGWLCNNA 420
Query: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYS 480
RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKS+RYE ALQLMNEVH++CWILNAGCYS
Sbjct: 421 RIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSRRYEVALQLMNEVHSKCWILNAGCYS 480
Query: 481 ELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYA 540
ELIEGLCQANRTLEAAEVFC+MSKNR+PLHPSLFDTLIK MCDLG++DETLVLLQLA YA
Sbjct: 481 ELIEGLCQANRTLEAAEVFCHMSKNRHPLHPSLFDTLIKEMCDLGHVDETLVLLQLASYA 540
Query: 541 GTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKES 600
GTSCKTVTYASI+HELSK+NKA LLVLSQMLVLG +L+LETYYILIHSFS++NRV ES
Sbjct: 541 GTSCKTVTYASILHELSKTNKAVTALLVLSQMLVLGCNLDLETYYILIHSFSSINRVNES 600
Query: 601 ILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLING 660
ILLFN MV E LLPDSE LY+L LCIANHSQLHMISTTIDKL+THTDLVNTATYNLLING
Sbjct: 601 ILLFNCMVNEALLPDSEGLYNLLLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLING 660
Query: 661 LWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSI 720
LWKEDRK+EACKLLDSMLEKGWVPDA THGLLIGSL +EKTGDR+LI+E+S IEDNVSSI
Sbjct: 661 LWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDRVLISENSAIEDNVSSI 720
Query: 721 LVEGLGNS 726
LVEGLGNS
Sbjct: 721 LVEGLGNS 728
BLAST of Lsi03G017990 vs. NCBI nr
Match:
XP_022940102.1 (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like [Cucurbita moschata] >XP_022940109.1 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 621/725 (85.66%), Postives = 668/725 (92.14%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV PNSCLSPILSG +VD+FLENNQ+ PR ++STQ L++K V N
Sbjct: 1 MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
Query: 61 NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVN 120
NSVKGLDN+ NLNSEVEIFKCLAIQKGF TVQTYY TILK GLDGN+EEM+RTC+DLV
Sbjct: 61 NSVKGLDNENNLNSEVEIFKCLAIQKGFSHTVQTYYVTILKQGLDGNVEEMDRTCQDLVK 120
Query: 121 EGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQ 180
+GC GVEEVIVTLVNAFVRHGRTREALRVLPH++LVGLKPS+ETFNVVLAVFVEENRDI+
Sbjct: 121 DGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIE 180
Query: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLL 240
EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGC+PNSKTFE+LL
Sbjct: 181 EVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILL 240
Query: 241 NGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIV 300
NGLIT++LVDEAVL LGI+YKIGC+LDLSFYTCA+SLFCR DRIDVGSWLFRMMKASNI+
Sbjct: 241 NGLITRNLVDEAVLALGILYKIGCELDLSFYTCAVSLFCRVDRIDVGSWLFRMMKASNII 300
Query: 301 PVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKF 360
P TLIYSTLIQSLCKNL LDEA FLLEEMVESGLMPEDNVYVSIIK FFELGKTDEAIKF
Sbjct: 301 PDTLIYSTLIQSLCKNLLLDEASFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKF 360
Query: 361 VDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIG 420
V DRC +T+ HNALLEGC + G I +AN +LG+MSKM+IDDCKSWNIVIGWLCNNARIG
Sbjct: 361 VKDRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIG 420
Query: 421 NAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELI 480
AFEFLGKMIVLSFVPN+DTYAALI+GNCKS+RYEAALQLMNEVHARCW+L+AGCYSELI
Sbjct: 421 KAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELI 480
Query: 481 EGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTS 540
E LCQA RTLEAAEVFCYMSKNRYPLHPSLFDTLIKG+CDLG+IDE LVLLQLACYAGTS
Sbjct: 481 ESLCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTS 540
Query: 541 CKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILL 600
CKTVTYASI++ELSKSNKAEI LLVLSQMLVLGYSLNLETY I IHSF AMNRVK+SI L
Sbjct: 541 CKTVTYASIVYELSKSNKAEIALLVLSQMLVLGYSLNLETYCIFIHSFCAMNRVKDSITL 600
Query: 601 FNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
FN MV EGLLPDSERL+DL LCIA+HSQLHMI TTIDKLI HTDLVNTATYNLLINGLWK
Sbjct: 601 FNRMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWK 660
Query: 661 EDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVE 720
EDRK+EACKLLDSMLEKGWVPDA THGLLIGSLV NE+SVIEDNVSSILVE
Sbjct: 661 EDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLV----------NENSVIEDNVSSILVE 715
Query: 721 GLGNS 726
GLGN+
Sbjct: 721 GLGNT 715
BLAST of Lsi03G017990 vs. NCBI nr
Match:
KAG7028171.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 620/725 (85.52%), Postives = 668/725 (92.14%), Query Frame = 0
Query: 1 MAARFMPSTLVKKILKGVIPNSCLSPILSGIHVDTFLENNQNCPRSKQSTQFLSDKSVSN 60
MAAR MPSTL+KK LKGV PNSCLSPILSG +VD+FLENNQ+ PR ++STQ L++K V N
Sbjct: 1 MAARLMPSTLMKKFLKGVKPNSCLSPILSGNYVDSFLENNQSNPRLEESTQSLNNKFVLN 60
Query: 61 NSVKGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVN 120
NSVKGLDN+ NLNSEVEIFKCLAIQKGF VQTYY TILK GLDGN+EEM+RTC+DLV
Sbjct: 61 NSVKGLDNENNLNSEVEIFKCLAIQKGFSHAVQTYYVTILKQGLDGNVEEMDRTCQDLVK 120
Query: 121 EGCSGVEEVIVTLVNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQ 180
+GC GVEEVIVTLVNAFVRHGRTREALRVLPH++LVGLKPS+ETFNVVLAVFVEENRDI+
Sbjct: 121 DGCLGVEEVIVTLVNAFVRHGRTREALRVLPHVNLVGLKPSIETFNVVLAVFVEENRDIE 180
Query: 181 EVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLL 240
EVLFVYKEMVKA IVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGC+PNSKTFE+LL
Sbjct: 181 EVLFVYKEMVKASIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCVPNSKTFEILL 240
Query: 241 NGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIV 300
NGLIT++LVDEAVL LGI+YKIGC+LDLS YTCA+SLFCR DRIDVGSWLFRMMKASNI+
Sbjct: 241 NGLITRNLVDEAVLALGILYKIGCELDLSLYTCAVSLFCRVDRIDVGSWLFRMMKASNII 300
Query: 301 PVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKF 360
P TLIYSTLIQSLCKNL LDEALFLLEEMVESGLMPEDNVYVSIIK FFELGKTDEAIKF
Sbjct: 301 PGTLIYSTLIQSLCKNLLLDEALFLLEEMVESGLMPEDNVYVSIIKVFFELGKTDEAIKF 360
Query: 361 VDDRCAFYTASHNALLEGCSDAGKISLANCILGEMSKMNIDDCKSWNIVIGWLCNNARIG 420
V DRC +T+ HNALLEGC + G I +AN +LG+MSKM+IDDCKSWNIVIGWLCNNARIG
Sbjct: 361 VKDRCFLFTSPHNALLEGCCNVGNILIANRVLGQMSKMSIDDCKSWNIVIGWLCNNARIG 420
Query: 421 NAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELI 480
AFEFLGKMIVLSFVPN+DTYAALI+GNCKS+RYEAALQLMNEVHARCW+L+AGCYSELI
Sbjct: 421 KAFEFLGKMIVLSFVPNKDTYAALIIGNCKSRRYEAALQLMNEVHARCWVLHAGCYSELI 480
Query: 481 EGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTS 540
E LCQA RTLEAAEVFCYMSKNRYPLHPSLFDTLIKG+CDLG+IDE LVLLQLACYAGTS
Sbjct: 481 ESLCQAKRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGICDLGHIDEALVLLQLACYAGTS 540
Query: 541 CKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILL 600
CKTVTYASI++ELSKSNKAEI LLVLSQMLVLGY+LNLETY ILIHSFSAMNRVK+SI L
Sbjct: 541 CKTVTYASIVYELSKSNKAEIALLVLSQMLVLGYNLNLETYCILIHSFSAMNRVKDSITL 600
Query: 601 FNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWK 660
N MV EGLLPDSERL+DL LCIA+HSQLHMI TTIDKLI HTDLVNTATYNLLINGLWK
Sbjct: 601 LNRMVNEGLLPDSERLHDLLLCIADHSQLHMILTTIDKLIAHTDLVNTATYNLLINGLWK 660
Query: 661 EDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDRILINEHSVIEDNVSSILVE 720
EDRK+EACKLLDSMLEKGWVPDA THGLLIGSLV NE+SVIEDNVSSILVE
Sbjct: 661 EDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLV----------NENSVIEDNVSSILVE 715
Query: 721 GLGNS 726
GLGN+
Sbjct: 721 GLGNT 715
BLAST of Lsi03G017990 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 203.4 bits (516), Expect = 6.3e-52
Identity = 159/648 (24.54%), Postives = 298/648 (45.99%), Query Frame = 0
Query: 64 KGLDNDKNLNSEVEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCRDLVNEGC 123
K L+ N+++ +E+F Q G+ + Y I KLG +G + ++R + +EG
Sbjct: 83 KLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI 142
Query: 124 SGVEEVIVTLVNAFVRHGRTREALRVLPHI-SLVGLKPSVETFNVVLAVFVEENRDIQEV 183
E + ++++ + + G + R++ + ++ +P+ +++NVVL + V N +
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH-KVA 202
Query: 184 LFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNG 243
V+ +M+ I P + T ++ A +I +A++ R M+K GC+PNS ++ L++
Sbjct: 203 ANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHS 262
Query: 244 LITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPV 303
L + V+EA+ +L M+ +GC D + I C+ DRI+ + + M P
Sbjct: 263 LSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 322
Query: 304 TLIYSTLIQSLCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAIKFVD 363
+ Y L+ LCK +D A L + + PE ++ ++I F G+ D+A +
Sbjct: 323 DITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLS 382
Query: 364 DRCAFY-----TASHNALLEGCSDAGKISLANCILGEMSKMNIDDCK----SWNIVIGWL 423
D Y ++N+L+ G G + LA +L +M CK S+ I++
Sbjct: 383 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG---CKPNVYSYTILVDGF 442
Query: 424 CNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNA 483
C +I A+ L +M PN + LI CK R A+++ E+ + +
Sbjct: 443 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 502
Query: 484 GCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQL 543
++ LI GLC+ + A + M + ++TLI G I E L+
Sbjct: 503 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 562
Query: 544 ACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNR 603
+ G+ +TY S++ L ++ + + + +ML G++ + + ILI+
Sbjct: 563 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 622
Query: 604 VKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNL 663
V+E++ MV G PD L + ++ T KL +T T+N
Sbjct: 623 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 682
Query: 664 LINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLIGSLVKEKTGDR 702
L++ L K ++AC LLD +E G+VP+ T +L+ S++ ++T DR
Sbjct: 683 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
BLAST of Lsi03G017990 vs. TAIR 10
Match:
AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 196.1 bits (497), Expect = 1.0e-49
Identity = 169/630 (26.83%), Postives = 283/630 (44.92%), Query Frame = 0
Query: 76 VEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCR--DLVNEGCSGVEEVIVTL 135
+++F LA KG F + T + L E ++ C D+V +G S + T
Sbjct: 211 LDVFPVLA-NKGMFPSKTTCNILLTSL---VRANEFQKCCEAFDVVCKGVSPDVYLFTTA 270
Query: 136 VNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKE-MVKA 195
+NAF + G+ EA+++ + G+ P+V TFN V+ R + F++KE MV+
Sbjct: 271 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEKMVER 330
Query: 196 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 255
G+ P + T + L+ L A++I A + M+KKG PN + L++ I +++A
Sbjct: 331 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 390
Query: 256 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 315
+ + +M G L S Y I +C+ + D L + M + ++++I
Sbjct: 391 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 450
Query: 316 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAI----KFVDDRCAFY 375
LC +L D AL + EM+ + P + ++I + GK +A+ +F++
Sbjct: 451 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 510
Query: 376 TASHNALLEGCSDAGKISLANCILGE-MSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLG 435
T + NALL G +AGK+ A I E + + + D S+N +I C ++ AF FL
Sbjct: 511 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 570
Query: 436 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 495
+M+ P+ TY+ LI G + E A+Q ++ + + YS +I+G C+A
Sbjct: 571 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 630
Query: 496 RTLEAAEVFC-YMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTY 555
RT E E F MSKN P TV Y
Sbjct: 631 RTEEGQEFFDEMMSKNVQP------------------------------------NTVVY 690
Query: 556 ASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVY 615
++ +S + + L + M G S N TY LI S ++RV+E+ LLF M
Sbjct: 691 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 750
Query: 616 EGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHE 675
EGL P+ L Q+ + + ++ + N TY ++I G ++ E
Sbjct: 751 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 798
Query: 676 ACKLLDSMLEKGWVPDAMTHGLLIGSLVKE 697
A +LL+ M EKG VPD++T+ I +K+
Sbjct: 811 ASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
BLAST of Lsi03G017990 vs. TAIR 10
Match:
AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 196.1 bits (497), Expect = 1.0e-49
Identity = 169/630 (26.83%), Postives = 283/630 (44.92%), Query Frame = 0
Query: 76 VEIFKCLAIQKGFFQTVQTYYETILKLGLDGNIEEMERTCR--DLVNEGCSGVEEVIVTL 135
+++F LA KG F + T + L E ++ C D+V +G S + T
Sbjct: 211 LDVFPVLA-NKGMFPSKTTCNILLTSL---VRANEFQKCCEAFDVVCKGVSPDVYLFTTA 270
Query: 136 VNAFVRHGRTREALRVLPHISLVGLKPSVETFNVVLAVFVEENRDIQEVLFVYKE-MVKA 195
+NAF + G+ EA+++ + G+ P+V TFN V+ R + F++KE MV+
Sbjct: 271 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR--YDEAFMFKEKMVER 330
Query: 196 GIVPNVDTLNFLLAALFHAEQIKTAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEA 255
G+ P + T + L+ L A++I A + M+KKG PN + L++ I +++A
Sbjct: 331 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 390
Query: 256 VLVLGIMYKIGCKLDLSFYTCAISLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQS 315
+ + +M G L S Y I +C+ + D L + M + ++++I
Sbjct: 391 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 450
Query: 316 LCKNLSLDEALFLLEEMVESGLMPEDNVYVSIIKAFFELGKTDEAI----KFVDDRCAFY 375
LC +L D AL + EM+ + P + ++I + GK +A+ +F++
Sbjct: 451 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 510
Query: 376 TASHNALLEGCSDAGKISLANCILGE-MSKMNIDDCKSWNIVIGWLCNNARIGNAFEFLG 435
T + NALL G +AGK+ A I E + + + D S+N +I C ++ AF FL
Sbjct: 511 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 570
Query: 436 KMIVLSFVPNEDTYAALIVGNCKSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQAN 495
+M+ P+ TY+ LI G + E A+Q ++ + + YS +I+G C+A
Sbjct: 571 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 630
Query: 496 RTLEAAEVFC-YMSKNRYPLHPSLFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTY 555
RT E E F MSKN P TV Y
Sbjct: 631 RTEEGQEFFDEMMSKNVQP------------------------------------NTVVY 690
Query: 556 ASIMHELSKSNKAEITLLVLSQMLVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVY 615
++ +S + + L + M G S N TY LI S ++RV+E+ LLF M
Sbjct: 691 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 750
Query: 616 EGLLPDSERLYDLFLCIANHSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHE 675
EGL P+ L Q+ + + ++ + N TY ++I G ++ E
Sbjct: 751 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 798
Query: 676 ACKLLDSMLEKGWVPDAMTHGLLIGSLVKE 697
A +LL+ M EKG VPD++T+ I +K+
Sbjct: 811 ASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
BLAST of Lsi03G017990 vs. TAIR 10
Match:
AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 184.5 bits (467), Expect = 3.0e-46
Identity = 144/543 (26.52%), Postives = 243/543 (44.75%), Query Frame = 0
Query: 156 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 215
+G+ ++ T+++++ F ++ + L V +M+K G P++ TLN LL H +I
Sbjct: 110 LGISHNLYTYSILINCFCRRSQ-LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 169
Query: 216 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 275
A++ +M + G P+S TF L++GL + EAV ++ M GC+ DL Y +
Sbjct: 170 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 229
Query: 276 SLFCREDRIDVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGLM 335
+ C+ ID+ L + M+ I P +IY+T+I +LC ++++AL L EM G+
Sbjct: 230 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 289
Query: 336 PEDNVYVSIIKAFFELGKTDEAIKFVDD----RCAFYTASHNALLEGCSDAGKISLANCI 395
P Y S+I+ G+ +A + + D + + +AL++ GK+ A +
Sbjct: 290 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 349
Query: 396 LGEMSKMNID-DCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNCK 455
EM K +ID D +++ +I C + R+ A MI PN TY LI G CK
Sbjct: 350 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 409
Query: 456 SKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPSL 515
+KR + ++L E+ R + N Y+ LI G QA A VF M +
Sbjct: 410 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 469
Query: 516 FDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQML 575
+ L+ G+C+ G ++ LV+ + + TY ++ + K+ K E + +
Sbjct: 470 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 529
Query: 576 VLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEGLLPDSERLYDLFLCIANHSQLH 635
+ G N+ TY ++ F +E+ LF M EG LPDS
Sbjct: 530 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS----------------- 589
Query: 636 MISTTIDKLITHTDLVNTATYNLLINGLWKEDRKHEACKLLDSMLEKGWVPDAMTHGLLI 694
TYN LI ++ K + +L+ M +V DA T GL+
Sbjct: 590 ------------------GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVT 616
BLAST of Lsi03G017990 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 1.2e-45
Identity = 159/658 (24.16%), Postives = 292/658 (44.38%), Query Frame = 0
Query: 40 NQNCPRSKQSTQFLSDKSVSNNSVKGLDNDKNL---NSEVEIFKCLAIQKGFFQTVQTYY 99
N P S S ++S+ VK LD+ ++ ++ + +F + + F Y
Sbjct: 28 NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87
Query: 100 ETILKLGLDGNIEEMERTCRDLVNEGCSGVEEVIVTLVNAFVRHGRTREALRVLP-HISL 159
E +L+LG G+ ++M++ D+ + C + L+ ++ + E L V+ I
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 160 VGLKPSVETFNVVLAVFVEENRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIK 219
GLKP +N +L + V+ N ++ V + +M GI P+V T N L+ AL A Q++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 207
Query: 220 TAMNQFRRMSKKGCIPNSKTFEVLLNGLITKDLVDEAVLVLGIMYKIGCKLDLSFYTCAI 279
A+ M G +P+ KTF ++ G I + +D A+ + M + GC +
Sbjct: 208 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 267
Query: 280 SLFCREDRI-DVGSWLFRMMKASNIVPVTLIYSTLIQSLCKNLSLDEALFLLEEMVESGL 339
FC+E R+ D +++ M P ++TL+ LCK + A+ +++ M++ G
Sbjct: 268 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 327
Query: 340 MPEDNVYVSIIKAFFELGKTDEAIKFVDDR----CAFYTASHNALLEGCSDAGKISLANC 399
P+ Y S+I +LG+ EA++ +D C+ T ++N L+ ++ A
Sbjct: 328 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 387
Query: 400 ILGEM-SKMNIDDCKSWNIVIGWLCNNARIGNAFEFLGKMIVLSFVPNEDTYAALIVGNC 459
+ + SK + D ++N +I LC A E +M P+E TY LI C
Sbjct: 388 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 447
Query: 460 KSKRYEAALQLMNEVHARCWILNAGCYSELIEGLCQANRTLEAAEVFCYMSKNRYPLHPS 519
+ + AL ++ ++ + Y+ LI+G C+AN+T EA E+F M + +
Sbjct: 448 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 507
Query: 520 LFDTLIKGMCDLGYIDETLVLLQLACYAGTSCKTVTYASIMHELSKSNKAEITLLVLSQM 579
++TLI G+C +++ L+ G TY S++ + + ++ M
Sbjct: 508 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 567
Query: 580 LVLGYSLNLETYYILIHSFSAMNRVKESILLFNHMVYEG--LLPDSER--LYDLFLCIAN 639
G ++ TY LI RV+ + L + +G L P + + LF
Sbjct: 568 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 627
Query: 640 HSQLHMISTTIDKLITHTDLVNTATYNLLINGLWKEDRK-HEACKLLDSMLEKGWVPD 683
+++ +++ D V +Y ++ GL EA L +LEKG+VP+
Sbjct: 628 TEAINLFREMLEQNEAPPDAV---SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FMF6 | 8.9e-51 | 24.54 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
| Q940A6 | 1.4e-48 | 26.83 | Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... | [more] |
| Q9CAN0 | 4.3e-45 | 26.52 | Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... | [more] |
| Q9LFF1 | 1.6e-44 | 24.16 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
| Q9LQ16 | 1.1e-43 | 25.35 | Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LE83 | 0.0e+00 | 89.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782810 PE=4 SV=1 | [more] |
| A0A5A7TKH0 | 0.0e+00 | 87.50 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3B7Q0 | 0.0e+00 | 87.50 | pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like OS=Cuc... | [more] |
| A0A6J1FJ39 | 0.0e+00 | 85.66 | pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1L2T0 | 0.0e+00 | 84.83 | pentatricopeptide repeat-containing protein At1g64583, mitochondrial-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038904717.1 | 0.0e+00 | 91.45 | pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like [Benin... | [more] |
| XP_004136720.1 | 0.0e+00 | 89.70 | pentatricopeptide repeat-containing protein At1g62914, mitochondrial [Cucumis sa... | [more] |
| XP_008442951.1 | 0.0e+00 | 87.50 | PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-... | [more] |
| XP_022940102.1 | 0.0e+00 | 85.66 | pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like [Cucur... | [more] |
| KAG7028171.1 | 0.0e+00 | 85.52 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G64320.1 | 6.3e-52 | 24.54 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G19440.1 | 1.0e-49 | 26.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G19440.2 | 1.0e-49 | 26.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G63130.1 | 3.0e-46 | 26.52 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G53700.1 | 1.2e-45 | 24.16 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
