Lsi03G017730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G017730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosomal protein
Location	chr03: 29138722 .. 29142098 (+)
RNA-Seq Expression	Lsi03G017730
Synteny	Lsi03G017730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTCCGGTATGCCGTCGCTGGTCTTCTCTTCCCTTTGTCTCTCTTCATATTCTTTGATCGCATTACCATTTTCCCATTGTTATTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTTTCTTACCGTTTCTATACTCTGTTTGTGCATAGGACTGAAGTGTATAGTGTCTTTGCGAAGGCGGAGATTCGAAAATGAGGTATTTTTGTCAGCATTCTCTATGTTTTGGATAATTGTTTTGGTTTCAGATTCATGTTCGCATTTGGGTTTTACTAGTTATGATGCTTGCACTCCCTTGATTTCTTTTCTTCGATTCTACTGTCTAGAGTTTTATGGTGGATAGAATAATGGGTTCTGTATAATTTAATCCAATGTTCGAGTACTGTGAACTTTTGAGAAAGTGGATTGACGATCTTTTGGAAGTAGGCTTCTTTTCTTTGATTCTACTGTTTCGAGTTTTATGGTTCCTAGAATAATGGGTTTGTTCTGAATAATCTAATCTACTGTTCGAGTAATGTGAACTTTTGAGAGAGTAGATTGACGATCTTTAGGAAATAGGCTTCTTTTCTTCAATTCGACTGTTTTGAGTTTATGGTTACTGGAATAATGCGTTCTAATTGATTTAATCTAATGTTCGAGTAATGTGAATTTTTAAGAGAGTGGGTTGGTGATCTTTAGGAAGTAGGCTTTTTTATTCGATTCTACTGTTTTGAGCTTTATGGTTGCTAGAATAATGGGTTGGCTCTGAATAATCTAATCTACTGTTCGAGTAATGTGAACTTTTGAGATAGTGGATCGATGATCTTTTATGGTTACTAGAATAATGGATTGGGGGTCTGAATAATCGAATCTACTGTTTGAGTAATGTGAACTTTTGGGAATGTGGATTGACGATCTTTAGGAAGTAGGCTTTTTTTCTTTTATTCTACCGTTTTGAGTTTTTTATGGTTGCTATAATAATGGATTGCTGATTAATAGGAAGTAGGCTTGTTTTCCTGTGCTTCTTCATGAAATTTCAGCGATCGTTTTAGTTATACATTGTGTGTGTAGTCTTATCCTTTCATTTCTCTATACAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATCTATCTTCATTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAAACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACGTTGAAGAGGTAATTTTACTCAGCTCTAGGTACACGAACGTGTTATTGCTGACCCTGTGATATTTTGCTTCCTATAGCTTAACATTGCTTTAATGTAAGCTATAGAAATTTATTTTATTACGTTCAATATTTTAAACTATATTTGCTTTCATATAATCAAATATATTGTTGGATTCTAAATATAATCTATCTGTTTTTAAATTCCTACCATTTAATGATGTTTTGTGGTGTGTATGAGCTAAATATTAGCGTTTCTGATGATCGTTTCGGAGATGGACCATTTGATATCCCACTTCTTATCTATTATTTAAGCTTTCCACACGCGTAGACGATTTGTCTTAATGGGGTTCATGAAAATATACTTCAGGCTGAGAAAATTGGTCTAGACTATATGGATGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCCTGGTCTCAACAAAGCAGGTTAGAATATTTTTATGGTGATATTGTTCTTCTGTTTTCCTTCACCAAATATGATTAATTACTGAGACCATTGAGCTTCAGATCGGGCTGAAATATTTATTCTTGTTATGTTCAACTGTCAATTCTATCTTTGATTTTTTTCATGCCTCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCCAAAGTCAACGAGACAAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCCGTTGGAAACATTGCCATGGAAGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTAAGTTAATCTCAGTATATCTCTTAACTCAAACTTGATATGTTTCATCTTTTTTGCTCATGGAAATGTAAATATGGTTGTTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACAATGGGCAAGTCGTACCGGGTTTTCTAAGCTCTATTAGCAATCTAGTCAATCTTGCGTGTTCGATCTCTTTACTGTCTACATTAACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGAATGATTCTTGATCAAAGAAACAGTGATGTTTTCTTCTCCTTTAAAGTGACAATTGATAATGAAGTTTTTTTATTCCCATCAACC

mRNA sequence

TTCTTCTCCGGTATGCCGTCGCTGGACTGAAGTGTATAGTGTCTTTGCGAAGGCGGAGATTCGAAAATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATCTATCTTCATTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAAACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACGTTGAAGAGGCTGAGAAAATTGGTCTAGACTATATGGATGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCCTGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCCAAAGTCAACGAGACAAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCCGTTGGAAACATTGCCATGGAAGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGCAAGTCGTACCGGGTTTTCTAAGCTCTATTAGCAATCTAGTCAATCTTGCGTGTTCGATCTCTTTACTGTCTACATTAACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGAATGATTCTTGATCAAAGAAACAGTGATGTTTTCTTCTCCTTTAAAGTGACAATTGATAATGAAGTTTTTTTATTCCCATCAACC

Coding sequence (CDS)

ATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATCTATCTTCATTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAAACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACGTTGAAGAGGCTGAGAAAATTGGTCTAGACTATATGGATGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCCTGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCCAAAGTCAACGAGACAAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCCGTTGGAAACATTGCCATGGAAGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGCAAGTCGTACCGGGTTTTCTAA

Protein sequence

MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF

Homology

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BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.6e-102
Identity = 188/216 (87.04%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-101
Identity = 190/217 (87.56%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.1e-101
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-112
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-112
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL
Match: A0A6J1DHY4 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.1e-112
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL
Match: A0A0A0LVE6 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Lsi03G017730 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKS+MGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSSMGKSYRVF 216

[Close]

BLAST of Lsi03G017730 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Lsi03G017730 vs. NCBI nr
Match: XP_022153072.1 (60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S ribosomal protein L10a-like [Momordica charantia])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Lsi03G017730 vs. NCBI nr
Match: XP_031736233.1 (60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Csa_022884 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 209/216 (96.76%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE+IIKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Lsi03G017730 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Lsi03G017730 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 370.9 bits (951), Expect = 6.8e-103
Identity = 188/216 (87.04%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Lsi03G017730 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-102
Identity = 190/217 (87.56%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Lsi03G017730 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 369.8 bits (948), Expect = 1.5e-102
Identity = 190/217 (87.56%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Lsi03G017730 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 367.9 bits (943), Expect = 5.8e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Lsi03G017730 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 367.9 bits (943), Expect = 5.8e-102
Identity = 186/216 (86.11%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 1   MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

The following BLAST results are available for this feature:

BLAST of Lsi03G017730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	1.2e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.2e-104	88.43	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	9.6e-102	87.04	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	2.1e-101	87.56	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]
P59230	8.1e-101	86.11	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]

BLAST of Lsi03G017730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEW8	6.2e-112	98.15	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]
A0A1S3C7Q8	6.2e-112	98.15	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1	[more]
A0A6J1DHY4	8.1e-112	96.76	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1	[more]
A0A0A0LVE6	1.1e-111	96.76	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_1G163140 PE=3 SV=1	[more]
A0A6J1HYM1	1.4e-111	97.22	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1	[more]

BLAST of Lsi03G017730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893874.1	1.2e-112	99.07	60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro...	[more]
XP_008458587.1	1.3e-111	98.15	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom...	[more]
XP_022153072.1	1.7e-111	96.76	60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S riboso...	[more]
XP_031736233.1	2.2e-111	96.76	60S ribosomal protein L10a [Cucumis sativus] >KGN64929.1 hypothetical protein Cs...	[more]
XP_022932197.1	2.9e-111	97.22	60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom...	[more]

BLAST of Lsi03G017730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	6.8e-103	87.04	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	1.5e-102	87.56	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.5e-102	87.56	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	5.8e-102	86.11	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	5.8e-102	86.11	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 20..211 e-value: 6.6E-61 score: 207.3
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 2..214
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 2..214
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 65..154 e-value: 6.6E-61 score: 207.3
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 23..210 e-value: 3.0E-44 score: 151.2
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 9..215 e-value: 1.63188E-62 score: 191.629
IPR002143	Ribosomal protein L1	PIRSF	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 e-value: 6.2E-50 score: 167.6
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 3..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G017730.1	Lsi03G017730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome