Lsi03G016680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G016680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein SKIP19-like
Locationchr03: 27878511 .. 27879437 (+)
RNA-Seq ExpressionLsi03G016680
SyntenyLsi03G016680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATGATTCTGGTGAAGCTAGACGCCATTGATATCTTCTCCAGCGCCCAAAACGTTTGCTCTTCGTGGTGTAAGATTTGCAAAAACCCTCTCATGTGGCATGTGATCGATATGCACAATTTGGGTGATTTGAATGCTGATATGTATTTGGATTACAATTTGGAGGGTATATGTAGACACACTGTTGATCGTAGTTGTGGCCAATTGGTCGACATCAACATTGAGTACTTTGGCACCGATGAATTGCTCCATCACATTGCTCACAGTTCAAATCAACTTAGAAGACTTCGGATTTTAGATTGCTATGACATCTCAGATGAGCGATTGACTGAAGCAGTTTCAAAACTTCCATTGTTGGAGCATCTTGAAACATTTCTCTGATCATTTGATGTGGAAACTTTGAAAACTGTGGGAAGGTGTTGCCCTCTTTTGAAATCGCTGAAACTGAATAAGCCGTTTTATAGAGGACTATGGATGGGTCGGGACGGTGAGGCCTTTGCTATTGCTGAAACTATGCCTAAATTACATCACCTTCAAATATATGGCAATGTTCTAACTGACATGGGTTTGCAAGCTATTTTTGATGGCTGCCCTGATTTAGAATCTCTTGACCTACGCGGATGTTTCAATTTATTTTTGGAGGAGGAAGAGTTGGAAAAAAGATGTGTTGGAAGGATCAAAATTTTGTATTTGGCTCACGATCCAACTGATGGCTATGAATTATCTATCATAACTATCATCAAATACCCTAATTGTGATTCTGAAGATGTAGATTGCTCTTCTGGTTTCCCTGGCATTGGTTTCTTTCACAATTACAATTACAATGCCAATGATTATTGTTTCTTAAGGGACCGTTATTTCCTTGACTATGACGACTTCCGTAGATATGGTTCTTTAGGGGACGATGATTTCTTCGAATACTAG

mRNA sequence

ATGTTTATGATTCTGGTGAAGCTAGACGCCATTGATATCTTCTCCAGCGCCCAAAACGTTTGCTCTTCGTGGTGTAAGATTTGCAAAAACCCTCTCATGTGGCATGTGATCGATATGCACAATTTGGGTGATTTGAATGCTGATATGTATTTGGATTACAATTTGGAGGGTATATGTAGACACACTGTTGATCGTAGTTGTGGCCAATTGGTCGACATCAACATTGAGTACTTTGGCACCGATGAATTGCTCCATCACATTGCTCACAGTTCAAATCAACTTAGAAGACTTCGGATTTTAGATTGCTATGACATCTCAGATGAGCGATTGACTGAAGCAGTTTCAAAACTTCCATTAGGACTATGGATGGGTCGGGACGGTGAGGCCTTTGCTATTGCTGAAACTATGCCTAAATTACATCACCTTCAAATATATGGCAATGTTCTAACTGACATGGGTTTGCAAGCTATTTTTGATGGCTGCCCTGATTTAGAATCTCTTGACCTACGCGGATGTTTCAATTTATTTTTGGAGGAGGAAGAGTTGGAAAAAAGATGTGTTGGAAGGATCAAAATTTTGTATTTGGCTCACGATCCAACTGATGGCTATGAATTATCTATCATAACTATCATCAAATACCCTAATTGTGATTCTGAAGATGTAGATTGCTCTTCTGGTTTCCCTGGCATTGGTTTCTTTCACAATTACAATTACAATGCCAATGATTATTGTTTCTTAAGGGACCGTTATTTCCTTGACTATGACGACTTCCGTAGATATGGTTCTTTAGGGGACGATGATTTCTTCGAATACTAG

Coding sequence (CDS)

ATGTTTATGATTCTGGTGAAGCTAGACGCCATTGATATCTTCTCCAGCGCCCAAAACGTTTGCTCTTCGTGGTGTAAGATTTGCAAAAACCCTCTCATGTGGCATGTGATCGATATGCACAATTTGGGTGATTTGAATGCTGATATGTATTTGGATTACAATTTGGAGGGTATATGTAGACACACTGTTGATCGTAGTTGTGGCCAATTGGTCGACATCAACATTGAGTACTTTGGCACCGATGAATTGCTCCATCACATTGCTCACAGTTCAAATCAACTTAGAAGACTTCGGATTTTAGATTGCTATGACATCTCAGATGAGCGATTGACTGAAGCAGTTTCAAAACTTCCATTAGGACTATGGATGGGTCGGGACGGTGAGGCCTTTGCTATTGCTGAAACTATGCCTAAATTACATCACCTTCAAATATATGGCAATGTTCTAACTGACATGGGTTTGCAAGCTATTTTTGATGGCTGCCCTGATTTAGAATCTCTTGACCTACGCGGATGTTTCAATTTATTTTTGGAGGAGGAAGAGTTGGAAAAAAGATGTGTTGGAAGGATCAAAATTTTGTATTTGGCTCACGATCCAACTGATGGCTATGAATTATCTATCATAACTATCATCAAATACCCTAATTGTGATTCTGAAGATGTAGATTGCTCTTCTGGTTTCCCTGGCATTGGTTTCTTTCACAATTACAATTACAATGCCAATGATTATTGTTTCTTAAGGGACCGTTATTTCCTTGACTATGACGACTTCCGTAGATATGGTTCTTTAGGGGACGATGATTTCTTCGAATACTAG

Protein sequence

MFMILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTVDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPLGLWMGRDGEAFAIAETMPKLHHLQIYGNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSIITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDFRRYGSLGDDDFFEY
Homology
BLAST of Lsi03G016680 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-50
Identity = 122/286 (42.66%), Postives = 162/286 (56.64%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL +L AI+I  +AQ VC SW ++CK+P MW  IDMHNLGDL+    +DYNLE +CRH V
Sbjct: 30  ILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDD---MDYNLEIMCRHAV 89

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL---- 123
           DRS G LVDI I YFGT +LL++IAH S+ LR LR++ C  I+D+   EAV KLPL    
Sbjct: 90  DRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELE 149

Query: 124 ----------------------GLWMGR------DGEAFAIAETMPKLHHLQIYGNVLTD 183
                                  L + +      D +A AIAETMPKL HLQ+ GN L+D
Sbjct: 150 LSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSD 209

Query: 184 MGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSIITII 243
            GL AI D C +LE LDLR CFN+ L   +L+KRC   +K+  + H     +++ I +  
Sbjct: 210 TGLNAILDNCSNLEHLDLRRCFNVNL-VGDLQKRCFESVKV--VRHPNDSIHDIDIGSSE 269

Query: 244 KYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDF 258
                D  D+D  SG      +++++  A+D        F DYD F
Sbjct: 270 DEDPYDFSDIDLMSGDDDFEGYYDFS-GASD--------FSDYDQF 300

BLAST of Lsi03G016680 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-43
Identity = 99/236 (41.95%), Postives = 135/236 (57.20%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L AI+I  +AQ VC  W ++CK+P MW  ID+ N  D  A     Y+LE +CRH V
Sbjct: 192 ILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA---FKYDLESMCRHAV 251

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPLGLWM 123
           DRS G L++I I Y+GT++L+ +IA  S+ L+ L ++ C+ I+DE + +AVSK+PL  ++
Sbjct: 252 DRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYL 311

Query: 124 --------------------------------------GRDGEAFAIAETMPKLHHLQIY 183
                                                 G D  A AIAE+MP+L HLQ+ 
Sbjct: 312 EVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLL 371

Query: 184 GNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTD 202
           GN LT+ GL AI DGCP LE LDLR CFN+ L   +L+KRC  RIK L   +D  D
Sbjct: 372 GNGLTNKGLNAILDGCPHLEHLDLRQCFNINL-VGDLKKRCFERIKDLRCPNDSDD 423

BLAST of Lsi03G016680 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.9e-36
Identity = 101/276 (36.59%), Postives = 141/276 (51.09%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L  ++I  +A+ VC SW ++ K+PL+W  IDM NL  L    Y  Y +E  CRH V
Sbjct: 38  ILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRL----YCIYAMEACCRHVV 97

Query: 64  DRSCGQLVDINIEY--FGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL-- 123
           D S G L++ NI+   F T  LL+++A  S+ LRRLR+     I+   + EA+ KLPL  
Sbjct: 98  DLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKG-GQITSVGIFEAIVKLPLLE 157

Query: 124 ------------------------------GLWM---GRDGEAFAIAETMPKLHHLQIYG 183
                                         G W      D +A AIA+TMP L HLQ+  
Sbjct: 158 ELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLIS 217

Query: 184 NVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELS 243
           N LT++GL AI DGCP LE LDLR CFN+ L   +LE++C+ RIK     +D  D Y   
Sbjct: 218 NGLTNIGLNAILDGCPHLECLDLRQCFNINL-FGDLERQCLERIKDFRCPNDVLDDYNYV 277

BLAST of Lsi03G016680 vs. ExPASy Swiss-Prot
Match: Q9M0U7 (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 6.3e-34
Identity = 91/251 (36.25%), Postives = 127/251 (50.60%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L   DI  +A+ +C +W +ICK+P MW  I++ +       +  +++ E +CRH V
Sbjct: 51  ILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDC------LMYEFDFESMCRHIV 110

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLP----- 123
           D S G L++INIE+F +D LL +I   S  L+ L I     ++++ +   + KLP     
Sbjct: 111 DLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETL 170

Query: 124 ----------------------------LGLWMGR-------------DGEAFAIAETMP 183
                                       LG  +               D +A AIAE+MP
Sbjct: 171 VIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMP 230

Query: 184 KLHHLQIYGNVLTDMGLQAIFDGCPDLES-LDLRGCFNLFLEEEELEKRCVGRIKILYLA 208
           KL HLQ+ GN LT+ GL AI DGCP LE  LD+R CFN+ L    LEKRC+ RIK L   
Sbjct: 231 KLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINL-VGNLEKRCMKRIKELRRP 290

BLAST of Lsi03G016680 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L AI+I  +AQ VC SW ++C++P MW  ID+    +L   + L Y +E +C   V
Sbjct: 32  ILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAV 91

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL---- 123
           D S G L++INI+Y      L++IA  S+ LRRL ++DC  +    + EA  KLPL    
Sbjct: 92  DLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEEL 151

Query: 124 -------------------------------GLWMGRDGEAFAIAETMPKLHHLQIYGNV 176
                                          G     D  A AIAETMP L HLQ++ N 
Sbjct: 152 DITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAIAETMPGLRHLQLFRNG 211

BLAST of Lsi03G016680 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 146/292 (50.00%), Postives = 178/292 (60.96%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL AI+I SSAQ+VCS W KICK+PLMW V+DMHN+G+ +    +DY+LE +C   
Sbjct: 24  MILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWD----MDYDLEQMCIQA 83

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPLGLW 122
           VDRSCG+L+DINI+YFGT+ELL +I  SSNQLRRLRI+ C+ I+D  L+EAVSKLPL   
Sbjct: 84  VDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEH 143

Query: 123 M---------------GR----------------------DGEAFAIAETMPKLHHLQIY 182
           +               GR                      D +A AIAE MP L +LQI+
Sbjct: 144 LEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIF 203

Query: 183 GNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYEL 242
           G+ LTD GLQAI DGCPDLESLDLR CFNL L   +L   C  RIK L L HDPTD YE 
Sbjct: 204 GSSLTDRGLQAILDGCPDLESLDLRQCFNLDL-VGQLGVECAERIKHLRLPHDPTDDYEF 263

Query: 243 SIITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDF 258
            I+    + + DS D D  SGF  I F      + + Y +     F DY DF
Sbjct: 264 -IVETDGFGDDDSLDEDYPSGFSDIDFL---TEDDDYYEWSGGSNFSDYADF 306

BLAST of Lsi03G016680 vs. ExPASy TrEMBL
Match: A0A6P3ZH66 (F-box protein SKIP19 OS=Ziziphus jujuba OX=326968 GN=LOC107415145 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 130/268 (48.51%), Postives = 159/268 (59.33%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL +L AI+I +SAQNVCSSW  ICK+PLMW  IDM N GD      +DY+LE +CRH +
Sbjct: 27  ILSRLGAIEILTSAQNVCSSWRNICKDPLMWRTIDMRNPGDTYG---MDYDLETMCRHAI 86

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL---- 123
           D SCGQLVDINIE+FGTDELL ++   S+ +RRLR++ CY ISD  L+EA +KLPL    
Sbjct: 87  DLSCGQLVDINIEFFGTDELLKYLTDRSSMVRRLRLICCYSISDNGLSEAAAKLPLLEDL 146

Query: 124 ---------------------------------GLWMGRDGEAFAIAETMPKLHHLQIYG 183
                                               +  D EA AIA++MP+L HLQ++G
Sbjct: 147 EISYHSLSNEPLEAIGHCCPLLKSLKLNCRGFRHPHLAIDDEAVAIAKSMPELRHLQLFG 206

Query: 184 NVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYEL- 233
           N LT+ GLQAI DGCP LESLDLR CFN+ L    L KRC  +IK L   +D T+GYE  
Sbjct: 207 NKLTNEGLQAILDGCPHLESLDLRQCFNIAL-AGNLGKRCAEQIKDLRRPYDSTEGYEFD 266

BLAST of Lsi03G016680 vs. ExPASy TrEMBL
Match: A0A061DXY4 (F-box/LRR-repeat protein 23, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006073 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.6e-56
Identity = 140/305 (45.90%), Postives = 170/305 (55.74%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL +L A +I  SAQNVCS W KICK+PLMW  IDMHNLG + A+   D  LE +C H V
Sbjct: 340 ILSRLGAFEILKSAQNVCSQWRKICKDPLMWRSIDMHNLGYIAAE---DRVLEMMCVHAV 399

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLP----- 123
           DRSCG L+DINIEYFGTDELL +IA  S+ L+RLR++ CY+ISDE L++A SKLP     
Sbjct: 400 DRSCGHLLDINIEYFGTDELLLNIAERSSHLKRLRLVSCYNISDEGLSKAASKLPFLEEL 459

Query: 124 --------------LGLWMGR------------------DGEAFAIAETMPKLHHLQIYG 183
                         +G    R                  D EA AIA+TMP+LHHLQ++G
Sbjct: 460 EISYCTISKDALETVGRCFPRLKSFKFNIRGCRRFRLESDDEALAIAQTMPELHHLQLFG 519

Query: 184 NVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELS 243
           N LTD GLQAI +GCP LESLDLR CFN+ L    LEKRCV R+K L   +D T  YE  
Sbjct: 520 NKLTDDGLQAILNGCPHLESLDLRQCFNVSL-VGNLEKRCVERMKNLRRPYDSTHDYEFD 579

Query: 244 IITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDFRRYGSLGDD 272
                +  +  S D D  SG   I    +                 DYDD+  +   G  
Sbjct: 580 ----AEVHDTGSSDEDYPSGISDIDLMSD-----------------DYDDYFEFS--GAS 617

BLAST of Lsi03G016680 vs. ExPASy TrEMBL
Match: A0A6J1CYW9 (putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015857 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.6e-56
Identity = 129/243 (53.09%), Postives = 149/243 (61.32%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL A+DI S+AQ VCS W KIC +PLMW V+DM NL D    + +D +LE +C   
Sbjct: 26  MILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDD---SLDMDKDLEKMCMQA 85

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL--- 122
           VDRSCGQLVDINIE FGTDELLH+IA SSNQLRRLR++ C+DIS + L EAV KLPL   
Sbjct: 86  VDRSCGQLVDINIERFGTDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPKLPLLED 145

Query: 123 -------------------------------------GLWMGRDGEAFAIAETMPKLHHL 182
                                                   MG D EA AIAE MP L HL
Sbjct: 146 LEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDEEALAIAENMPNLRHL 205

Query: 183 QIYGNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDG 206
            I+ N LTD+GLQAI DGCP LESLDLR C NL L   +LEK+C  RIK L L +DP D 
Sbjct: 206 GIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNL-GGQLEKKCSKRIKSLQLPYDPIDD 264

BLAST of Lsi03G016680 vs. ExPASy TrEMBL
Match: A0A6J1ILH5 (F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 140/304 (46.05%), Postives = 174/304 (57.24%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL  +DI ++AQ+VCSSW KIC++PLMW V+DM   GD      +DY+LE +CR  
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDW---WDMDYDLEEMCRQA 88

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL--- 122
           VDRSCGQL+ INIE+FGTD+LL +I  SSNQLR+LR++ C  ISDE   +AVSKLPL   
Sbjct: 89  VDRSCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRLVYCNRISDEGFIKAVSKLPLLED 148

Query: 123 ------------------------GLWMGR--------DGEAFAIAETMPKLHHLQIYGN 182
                                    L + R        D  A AIAE MP L HLQI+GN
Sbjct: 149 LEISFGSFDVETLETLGHCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGN 208

Query: 183 VLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSI 242
            LT+ GL+AI DGCPDLESLDLR CFNL L   +L  +C  +IK L L HDPTD YE S 
Sbjct: 209 SLTNRGLEAILDGCPDLESLDLRQCFNLNL-AGQLGAKCSEKIKNLRLPHDPTDDYEFS- 268

Query: 243 ITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDFRRYGSLGDDD 272
             I++Y +   ED             + Y +  +D   L D      DD+  Y   G  D
Sbjct: 269 TEIVEYGDDYEED-------------YGYPFGLSDTDLLTDD-----DDY--YEFSGGSD 307

BLAST of Lsi03G016680 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-70
Identity = 167/306 (54.58%), Postives = 194/306 (63.40%), Query Frame = 0

Query: 1   MFMILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICR 60
           M MIL+KL AI+I +SAQNVCSSW KICK+PLMW VIDM N G+L     +D++LE +CR
Sbjct: 24  MSMILLKLGAIEILTSAQNVCSSWRKICKDPLMWRVIDMRNSGNL---YDMDHDLEIMCR 83

Query: 61  HTVDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL- 120
           H VDRSCGQL+DINIEYFGTDELL +I  SSNQLRRLR+ DCYDISDE LTEA+S+LPL 
Sbjct: 84  HAVDRSCGQLIDINIEYFGTDELLQYITQSSNQLRRLRLADCYDISDEGLTEAISRLPLL 143

Query: 121 ---------------------------------GLW---MGRDGEAFAIAETMPKLHHLQ 180
                                              W   M  + EA AIAETMPKL HLQ
Sbjct: 144 EHLEIFIYSFDVETLKTVGRCCPLLKWLKLIEEQYWREDMVTNKEALAIAETMPKLRHLQ 203

Query: 181 IYGNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDP-TDG 240
           I GN LT+MGLQAI DGCPDLESLDLR CF+L L   +L K C  R K+L+L HD  T+G
Sbjct: 204 IIGNGLTNMGLQAILDGCPDLESLDLRQCFHLNL-NGQLGKECAERFKVLHLPHDRLTNG 263

Query: 241 YELSIITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDFRRYGS 269
           +E +  T I + + DSED D S  F GI   H+Y      Y FL D  FLDYDD  R   
Sbjct: 264 HECTNKT-IHFGDHDSEDED-SIDFSGID--HDY------YDFLVDSDFLDYDDSTRINY 315

BLAST of Lsi03G016680 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 246.1 bits (627), Expect = 3.4e-61
Identity = 146/292 (50.00%), Postives = 178/292 (60.96%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL AI+I SSAQ+VCS W KICK+PLMW V+DMHN+G+ +    +DY+LE +C   
Sbjct: 24  MILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWD----MDYDLEQMCIQA 83

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPLGLW 122
           VDRSCG+L+DINI+YFGT+ELL +I  SSNQLRRLRI+ C+ I+D  L+EAVSKLPL   
Sbjct: 84  VDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEH 143

Query: 123 M---------------GR----------------------DGEAFAIAETMPKLHHLQIY 182
           +               GR                      D +A AIAE MP L +LQI+
Sbjct: 144 LEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIF 203

Query: 183 GNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYEL 242
           G+ LTD GLQAI DGCPDLESLDLR CFNL L   +L   C  RIK L L HDPTD YE 
Sbjct: 204 GSSLTDRGLQAILDGCPDLESLDLRQCFNLDL-VGQLGVECAERIKHLRLPHDPTDDYEF 263

Query: 243 SIITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDF 258
            I+    + + DS D D  SGF  I F      + + Y +     F DY DF
Sbjct: 264 -IVETDGFGDDDSLDEDYPSGFSDIDFL---TEDDDYYEWSGGSNFSDYADF 306

BLAST of Lsi03G016680 vs. NCBI nr
Match: XP_038883784.1 (F-box protein SKIP19-like [Benincasa hispida])

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-57
Identity = 144/296 (48.65%), Postives = 173/296 (58.45%), Query Frame = 0

Query: 1   MFMILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICR 60
           M MIL KL  +DI ++AQ+VCSSW KIC++PLMW VIDM   GD      +DY+LE +CR
Sbjct: 25  MSMILHKLGPVDILTNAQDVCSSWRKICEDPLMWRVIDMRYSGDW---WDMDYDLEELCR 84

Query: 61  HTVDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL- 120
             V RSCGQLVDINIE+FGTD+LLH+I  SSNQL RLR++ C  ISDE L EAVS+LPL 
Sbjct: 85  QAVGRSCGQLVDINIEHFGTDDLLHYITQSSNQLSRLRLVYCNRISDEGLIEAVSRLPLL 144

Query: 121 --------------------------GLWMGR--------DGEAFAIAETMPKLHHLQIY 180
                                      L + R        D  A AIAE MP L HLQI+
Sbjct: 145 EDLELSFCSFDVETLGTLGQSCPGLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIF 204

Query: 181 GNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYEL 240
           GN LT+ GL+AI DGCP LESLDLR CFNL L   +L  +C G+IK L + HDPTD YE 
Sbjct: 205 GNSLTNSGLEAILDGCPALESLDLRQCFNLNL-AGQLGTKCSGKIKDLRVPHDPTDDYEF 264

Query: 241 SIITIIKYPNCDSEDVDCSSGFP-GIGFFHNYNYNANDYCFLRDRYFLDYDDFRRY 261
           S   II Y     +D D   G+P G+   +    + + Y F     F DY D   Y
Sbjct: 265 S-TEIIDY----DDDYDDDYGYPFGLSDTNLLTDDDDYYEFSGGSDFSDYTDLYFY 311

BLAST of Lsi03G016680 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 5.1e-57
Identity = 142/304 (46.71%), Postives = 176/304 (57.89%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL  +DI ++AQ+VCSSW KIC++PLMW V+DM   GD      +DY+LE +CR  
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDW---WDMDYDLEEMCRQA 88

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL--- 122
           VDRSCGQL+ INIE+FGTD+LLH+I  SSNQLR+LR++ C  ISDE L +AVSKLPL   
Sbjct: 89  VDRSCGQLIYINIEHFGTDDLLHYITQSSNQLRKLRLVYCNRISDEGLIKAVSKLPLLED 148

Query: 123 ------------------------GLWMGR--------DGEAFAIAETMPKLHHLQIYGN 182
                                    L + R        D  A AIAE MP L HLQI+GN
Sbjct: 149 LEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGN 208

Query: 183 VLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSI 242
            LT+ GL+AI DGCPDLESLDLR CFNL L   +L  +C  +IK L L HDPTD YE S 
Sbjct: 209 SLTNRGLEAILDGCPDLESLDLRQCFNLNL-AGQLGAKCSEKIKNLRLPHDPTDDYEFS- 268

Query: 243 ITIIKYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDFRRYGSLGDDD 272
             I++Y +   ED             + Y +  +D   L D      DD+  Y   G  D
Sbjct: 269 TEIVEYGDDYEED-------------YGYPFGLSDTDLLTDD-----DDY--YEFSGGSD 307

BLAST of Lsi03G016680 vs. NCBI nr
Match: KAG7034751.1 (Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-56
Identity = 139/291 (47.77%), Postives = 173/291 (59.45%), Query Frame = 0

Query: 3   MILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHT 62
           MIL+KL  +DI ++AQ+VCSSW KIC++PLMW V+DM   GD      +DY+LE +CR  
Sbjct: 29  MILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDW---WDMDYDLEEMCRQA 88

Query: 63  VDRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL--- 122
           VDRSCGQL+ INIE+FGTD+LL +I  SSNQLR+LR++ C  ISDE L +AVSKLPL   
Sbjct: 89  VDRSCGQLIYINIEHFGTDDLLQYITQSSNQLRKLRLVYCNRISDEGLIKAVSKLPLLED 148

Query: 123 ------------------------GLWMGR--------DGEAFAIAETMPKLHHLQIYGN 182
                                    L + R        D  A AIAE MP L HLQI+GN
Sbjct: 149 LEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLQIFGN 208

Query: 183 VLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSI 242
            LT+ GL+AI DGCPDLESLDLR CFNL L   +L  +C  +IK L L HDPTD YE S 
Sbjct: 209 SLTNRGLEAILDGCPDLESLDLRQCFNLNL-AGQLGAKCSEKIKNLRLPHDPTDDYEFS- 268

Query: 243 ITIIKYPNCDSEDVDCSSGFP-GIGFFHNYNYNANDYCFLRDRYFLDYDDF 258
             I++Y     +D +   G+P G+        + + Y F     F DY DF
Sbjct: 269 TEIVEY----GDDYEEDYGYPFGLSDTDLLTDDDDYYEFSGGSDFSDYTDF 310

BLAST of Lsi03G016680 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 122/286 (42.66%), Postives = 162/286 (56.64%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL +L AI+I  +AQ VC SW ++CK+P MW  IDMHNLGDL+    +DYNLE +CRH V
Sbjct: 30  ILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDD---MDYNLEIMCRHAV 89

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL---- 123
           DRS G LVDI I YFGT +LL++IAH S+ LR LR++ C  I+D+   EAV KLPL    
Sbjct: 90  DRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLPLEELE 149

Query: 124 ----------------------GLWMGR------DGEAFAIAETMPKLHHLQIYGNVLTD 183
                                  L + +      D +A AIAETMPKL HLQ+ GN L+D
Sbjct: 150 LSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSD 209

Query: 184 MGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELSIITII 243
            GL AI D C +LE LDLR CFN+ L   +L+KRC   +K+  + H     +++ I +  
Sbjct: 210 TGLNAILDNCSNLEHLDLRRCFNVNL-VGDLQKRCFESVKV--VRHPNDSIHDIDIGSSE 269

Query: 244 KYPNCDSEDVDCSSGFPGIGFFHNYNYNANDYCFLRDRYFLDYDDF 258
                D  D+D  SG      +++++  A+D        F DYD F
Sbjct: 270 DEDPYDFSDIDLMSGDDDFEGYYDFS-GASD--------FSDYDQF 300

BLAST of Lsi03G016680 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-37
Identity = 101/276 (36.59%), Postives = 141/276 (51.09%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L  ++I  +A+ VC SW ++ K+PL+W  IDM NL  L    Y  Y +E  CRH V
Sbjct: 38  ILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRL----YCIYAMEACCRHVV 97

Query: 64  DRSCGQLVDINIEY--FGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL-- 123
           D S G L++ NI+   F T  LL+++A  S+ LRRLR+     I+   + EA+ KLPL  
Sbjct: 98  DLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKG-GQITSVGIFEAIVKLPLLE 157

Query: 124 ------------------------------GLWM---GRDGEAFAIAETMPKLHHLQIYG 183
                                         G W      D +A AIA+TMP L HLQ+  
Sbjct: 158 ELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPGLLHLQLIS 217

Query: 184 NVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIKILYLAHDPTDGYELS 243
           N LT++GL AI DGCP LE LDLR CFN+ L   +LE++C+ RIK     +D  D Y   
Sbjct: 218 NGLTNIGLNAILDGCPHLECLDLRQCFNINL-FGDLERQCLERIKDFRCPNDVLDDYNYV 277

BLAST of Lsi03G016680 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 4.5e-35
Identity = 91/251 (36.25%), Postives = 127/251 (50.60%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L   DI  +A+ +C +W +ICK+P MW  I++ +       +  +++ E +CRH V
Sbjct: 51  ILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDC------LMYEFDFESMCRHIV 110

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLP----- 123
           D S G L++INIE+F +D LL +I   S  L+ L I     ++++ +   + KLP     
Sbjct: 111 DLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEKLPLLETL 170

Query: 124 ----------------------------LGLWMGR-------------DGEAFAIAETMP 183
                                       LG  +               D +A AIAE+MP
Sbjct: 171 VIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMP 230

Query: 184 KLHHLQIYGNVLTDMGLQAIFDGCPDLES-LDLRGCFNLFLEEEELEKRCVGRIKILYLA 208
           KL HLQ+ GN LT+ GL AI DGCP LE  LD+R CFN+ L    LEKRC+ RIK L   
Sbjct: 231 KLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINL-VGNLEKRCMKRIKELRRP 290

BLAST of Lsi03G016680 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-31
Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L AI+I  +AQ VC SW ++C++P MW  ID+    +L   + L Y +E +C   V
Sbjct: 32  ILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVELFYVIEPLCCRAV 91

Query: 64  DRSCGQLVDINIEYFGTDELLHHIAHSSNQLRRLRILDCYDISDERLTEAVSKLPL---- 123
           D S G L++INI+Y      L++IA  S+ LRRL ++DC  +    + EA  KLPL    
Sbjct: 92  DLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEEL 151

Query: 124 -------------------------------GLWMGRDGEAFAIAETMPKLHHLQIYGNV 176
                                          G     D  A AIAETMP L HLQ++ N 
Sbjct: 152 DITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAIAETMPGLRHLQLFRNG 211

BLAST of Lsi03G016680 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 8.7e-31
Identity = 89/252 (35.32%), Postives = 123/252 (48.81%), Query Frame = 0

Query: 4   ILVKLDAIDIFSSAQNVCSSWCKICKNPLMWHVIDMHNLGDLNADMYLDYNLEGICRHTV 63
           IL++L   DI  +AQ VC  W +ICK+P MW  I+  +       +  +++   +CRH V
Sbjct: 57  ILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDC------LMYNFDFVSMCRHIV 116

Query: 64  DRSCGQLVDINI-EYFGTDELLHHIAHSSNQLRRLRILDCYD-ISDERLTEAVSKLPL-- 123
           D S G L++IN+ E+F +D LL +I  +   LR L +  C+  ++   +  A++K+PL  
Sbjct: 117 DLSQGGLLEINVDEHFLSDSLLSYI--TDRNLRSLGLGMCFPRVTKLGVVNAIAKIPLLE 176

Query: 124 --------------------------------GLW-------------MGR---DGEAFA 183
                                            LW             MG    D +A A
Sbjct: 177 TLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALA 236

Query: 184 IAETMPKLHHLQIYGNVLTDMGLQAIFDGCPDLESLDLRGCFNLFLEEEELEKRCVGRIK 204
           IAE+MPKLHHLQ+  N LT+ GL AI DGCP LE LD+R CF + L    LEKRC+  IK
Sbjct: 237 IAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISL-VGNLEKRCLEMIK 296

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M0U92.2e-5042.66F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
Q9S9V92.0e-4341.95Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
Q9M0U63.9e-3636.59Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE... [more]
Q9M0U76.3e-3436.25Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE... [more]
Q9S9V81.5e-3036.71Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4... [more]
Match NameE-valueIdentityDescription
A0A6J1CXS51.7e-6150.00F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV... [more]
A0A6P3ZH661.2e-5648.51F-box protein SKIP19 OS=Ziziphus jujuba OX=326968 GN=LOC107415145 PE=4 SV=1[more]
A0A061DXY43.6e-5645.90F-box/LRR-repeat protein 23, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TC... [more]
A0A6J1CYW93.6e-5653.09putative F-box/LRR-repeat protein 23 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1ILH56.1e-5646.05F-box protein SKIP19-like OS=Cucurbita maxima OX=3661 GN=LOC111478528 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_038883506.12.4e-7054.58F-box protein SKIP19-like [Benincasa hispida][more]
XP_022146630.13.4e-6150.00F-box protein SKIP19-like [Momordica charantia][more]
XP_038883784.13.0e-5748.65F-box protein SKIP19-like [Benincasa hispida][more]
XP_023543623.15.1e-5746.71F-box protein SKIP19-like [Cucurbita pepo subsp. pepo][more]
KAG7034751.11.9e-5647.77Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subs... [more]
Match NameE-valueIdentityDescription
AT4G05460.11.5e-5142.66RNI-like superfamily protein [more]
AT4G05490.12.8e-3736.59RNI-like superfamily protein [more]
AT4G05475.14.5e-3536.25RNI-like superfamily protein [more]
AT4G05497.11.0e-3136.71RNI-like superfamily protein [more]
AT4G05470.18.7e-3135.32RNI-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..182
e-value: 2.6E-20
score: 74.6
NoneNo IPR availablePANTHERPTHR38926F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 128..202
NoneNo IPR availablePANTHERPTHR38926:SF2F-BOX/LRR-REPEAT PROTEIN 21-RELATEDcoord: 128..202
coord: 2..119
NoneNo IPR availablePANTHERPTHR38926F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 2..119
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 19..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G016680.1Lsi03G016680.1mRNA