Lsi03G015040 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G015040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Vesicle transport v-SNARE family protein
Location	chr03: 26059934 .. 26062257 (+)
RNA-Seq Expression	Lsi03G015040
Synteny	Lsi03G015040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCACCGAGGGCTTTTCAAAACTCCGGACACCATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGGTATAATGATCCAATTCTTCTTTTCTGAGTATCCATACTCGTTATTGTCTCTCAAGTGTGTTAAATACTGCGATTTTCTTGGATTTTCTTTGGAGTTTGATTGTTTTTGTTTCCTTCGTGATTCTGCAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGGTACTTGTACAAGTTTTTCGCACTAATTGAATTGGAATTTTACACTAAATTATTGACTTAACCTAAAGCTTATTGCAATTCTTTAGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTATGGATATATTTACTTGCTTGACCTCTTCTTGCAAATTGGTGTCATATGCAGGGACGTGATTGACCCTACATCCTGGAAAATGCATATTTACTCTTCTTTTTTGCTTCTATGTATGATTCTTAAAATATTGGAAGTTGTTTACTTGTTTGTGTATAAAATAAATTTAATCGACTTTTTGTTTGGGTAACGGAGTTCAAGAAACCATTAAGGGGTTGTTTGTGAGGTTGAAATGTAATTAGGATTACAGTAATTAGAGGAGTGTTGGAATGCGTGAGGTATCAAGGGCGGAACGAAAATGAGATTGTGAAACATGAAAACAGCAGGAAAGAGAGTTTGGTTAAAAACTGTCGGAACGGAATGAGTTTAATATTACAAATTGGGCCCAAAACGCTCAGTTCAAACATGAGTTTTTTATTATATTACAATTCAAACTCATTCCATTACGAGCCTCCAAACAGCATGGGTTGGCCTAGTGGGAAATAAAGGGCATGACTTTGATAAAGGACTAAGAGGTCATAGATTGAATCCTAGTGACCACCTACTTAGGATTTAATATCTTACGAGTTTTCTAGACACCCAAATATTGTAGGGTCGGGTGGGTTCTACTAGACACTCACGAATATCAAAAGAAGAAAAAAAAAACCATTGACTGTACAAATCATTACTTGTTAGTTCTAGTTCTGACAATCCACCAAGAATTAAAAACATGTTCAAGCTATATATTGGTTGAGTGTTGCTTGTAGTTGGGTGAGAAAGTCTGCATGATTAGAAGGTAGGTATTGAGAGAAAATGTGAGAGAGATTAATGAGACAAGGTGTGTGTAGAGAAAGCTAGAGCAAAAAAGTGTATAGAGAGAATTTAGTGGGAGAAAGCATGTGGAGTGTAATTAAAGAAAGAAAATGTGTTATGAGAGGTTGAGTATGAAGTGGTTAAGTAAATTCCATTTGATAAATCAGCTATCAATTGTTTCTTTAAAAGCACATCTTAATGCTTTAGCTTTTTAAAAGTGCTTCTAAATTGTAGTGAATGGTAGATTAATAGGAAGTTCTTTTAACCATCTAAAAGTATTTATGCCATGGTTCAGAGCATTCTCAAACATAGCCAGTTTAGGAAAGATTTTTACATGTTAGCTTCTACTGATTTGATAACTTATGTTTTTGGGTGGAGTTTACTAAAATGTGGATTTATGCCCATCTACTGATTTGATAACTTATGTTTTTGGGAGGAGTTTGCTAAAATGTGGATTTACGTGCTGATGCTTAAGTTTTCAAATCTATTTGCTTTATCTTCCCTTTCTCTCTGAAATTTATGGAGCAATCTTCTAATACTGAGGATGAAAACATAACCTTTAGGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGTAATCCTTCTCATTAGCTGGAAACTGTCAATAAATCTTGCTTTAGTTAGTTTCTTTGTCTTTCCTTTTGCAGTTAATCTCTCTCGTCTTAAAATACATTGGTGCTTTCAGCATTTCATTATCCTTGACCTCTTTTTCGACTGAAAGATATGTCATTGTGACAGCATTTACGATACTTTTTCCTCTTCCCTTAGCAACCATAGATTAA

mRNA sequence

TTGCACCGAGGGCTTTTCAAAACTCCGGACACCATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGGTATAATGATCCAATTCTTCTTTTCTGAGTATCCATACTCGTTATTGTCTCTCAAGTGTGTTAAATACTGCGATTTTCTTGGATTTTCTTTGGAGTTTGATTGTTTTTGTTTCCTTCGTGATTCTGCAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGTAATCCTTCTCATTAGCTGGAAACTGTCAATAAATCTTGCTTTATTAATCTCTCTCGTCTTAAAATACATTGGTGCTTTCAGCATTTCATTATCCTTGACCTCTTTTTCGACTGAAAGATATGTCATTGTGACAGCATTTACGATACTTTTTCCTCTTCCCTTAGCAACCATAGATTAA

Coding sequence (CDS)

TTGCACCGAGGGCTTTTCAAAACTCCGGACACCATGAGCGAGGTATTCGAAGGATACGAGCGTCAATATTGCGAGCTTTCTGCCAATCTTTCCAGAAAGTGCACCTCCGCCAGTGCCCTAGACGGAGGTATAATGATCCAATTCTTCTTTTCTGAGTATCCATACTCGTTATTGTCTCTCAAGTGTGTTAAATACTGCGATTTTCTTGGATTTTCTTTGGAGTTTGATTGTTTTTGTTTCCTTCGTGATTCTGCAGAGCAGAAGAAGCAAAAGCTTTCTGAGATAAAAGGTGGTATTGATGAAGCCGAATCTCTGATACGGAAAATGAATCTCGACGCAAGGAGTTTGCAGCCCAGTGTAAAGGCTGTTCTTCTTGCTAAGCTAAGGGAGTATAAATCGGATTTGAGCAATCTCAAAAGTGAAGTAAAACGAATTACGTTGGGCAACTTAAATGCAGCTGCACGCGATGAGCTGCTGGAATCTGGATTGGCTGATACCTTCACTGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGACAGGATTAAGGATAGTCAAAGAACTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCCTAGAAGACTTGCATTCACAGAGACAATCACTTTTGCGTGGCCATGACACGGTAATCCTTCTCATTAGCTGGAAACTGTCAATAAATCTTGCTTTATTAATCTCTCTCGTCTTAAAATACATTGGTGCTTTCAGCATTTCATTATCCTTGACCTCTTTTTCGACTGAAAGATATGTCATTGTGACAGCATTTACGATACTTTTTCCTCTTCCCTTAGCAACCATAGATTAA

Protein sequence

LHRGLFKTPDTMSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGFSLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTVILLISWKLSINLALLISLVLKYIGAFSISLSLTSFSTERYVIVTAFTILFPLPLATID

Homology

[Close]

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.7e-59
Identity = 126/215 (58.60%), Postives = 153/215 (71.16%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS+ FE YERQYCE+SANLS+KCTSA ALDG                             
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQ LSEIK G++EAE+L++KM+L+AR+L P+VK+ LL KLREY
Sbjct: 61  --------------EQKKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLVKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+N K+EVKRIT GNLNA ARDELLE+G+ADT T SADQR+RLM +T+ LG  +DRI
Sbjct: 121 KSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQRSRLMMSTDHLGRTTDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T+
Sbjct: 181 KDSRRTILETEELGVSILQDLHGQRQSLLRAHETL 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 7.7e-59
Identity = 125/215 (58.14%), Postives = 154/215 (71.63%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS+VF+GYERQYCELSA+LS+KC+SA +LDG                             
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIK G++ AE LIRKM+L+AR+L P++K+ LL KLRE+
Sbjct: 61  --------------EQKKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLVKLREF 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+N K+EVKRIT G LNAAARDELLE+G+ADT T SADQR RLM +TERLG  +DR+
Sbjct: 121 KSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMMSTERLGRTTDRV 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDS+RTM+ETE++GVSIL+DLH QRQSLLR H+T+
Sbjct: 181 KDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETL 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-47
Identity = 116/259 (44.79%), Postives = 157/259 (60.62%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS+VFEGYERQYCELS NLSRKC SAS L  G                            
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNG---------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         E+KK K++EIK GIDEA+ LIRKM+L+ARSLQPS KAV L+KLREY
Sbjct: 61  --------------EEKKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+ LK E KR++  +   ++R+EL+ESG+AD   VSADQR RL  + ERL   SDRI
Sbjct: 121 KSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAMSVERLDQSSDRI 180

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD-------------TVILLISWKLSINL 251
           ++S+R MLETE++G+SI++DL  QRQ+LL  H+              V+  +S +++ N 
Sbjct: 181 RESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAIDKSKKVLTAMSRRMTRNK 217

Query: 252 ALLISLVLKYIGAFSISLS 258
            ++ S+++  + A  + +S
Sbjct: 241 WIITSVIVALVLAIILIIS 217

[Close]

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.4e-12
Identity = 41/139 (29.50%), Postives = 76/139 (54.68%), Query Frame = 0


Query: 86  EQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRI 145
           ++KKQ ++ ++  ++EA  L+ +M+L+ R + P  + +   ++R YK ++  L+++ KR 
Sbjct: 32  DEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRS 91

Query: 146 TLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLG 205
            +     A  DE+    L D    S +QR  L+  TERL   S R++   +  +ETE +G
Sbjct: 92  RI-----AYSDEVRNELLGDAGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIG 151

Query: 206 VSILEDLHSQRQSLLRGHD 225
             +LE+L   R+ + R  D
Sbjct: 152 QEMLENLSHDREKIQRARD 165

[Close]

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 40/139 (28.78%), Postives = 77/139 (55.40%), Query Frame = 0


Query: 86  EQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRI 145
           ++KKQ ++ ++  ++EA+ L+ +M+L+ R + P  + +   ++R YK ++  L+++ KR 
Sbjct: 32  DEKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRS 91

Query: 146 TLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLG 205
            +     A  DE+    L D    S +QR  L+  TERL   S R++   +  +ETE +G
Sbjct: 92  RI-----AYSDEVRNELLGDDGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIG 151

Query: 206 VSILEDLHSQRQSLLRGHD 225
             +LE+L   R+ + R  +
Sbjct: 152 QEMLENLSHDREKIQRARE 165

[Close]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL
Match: A0A5D3DPX4 (Vesicle transport v-SNARE 13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007840 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.4e-71
Identity = 159/215 (73.95%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFE YERQYCELSANLSRKCTSA+ALDG                             
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK VLLA+LREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKIVLLARLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRIT GN+NA ARDELLESGLADT  VSADQRTRLMTTTERLGNMSDRI
Sbjct: 121 KSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDTV
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTV 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL
Match: A0A1S3B8M5 (vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 5.4e-71
Identity = 158/215 (73.49%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFE YERQYCELSANLSRKCTSA+ALDG                             
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK VLLA+LREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKIVLLARLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRIT GN+NA ARDELLESGLADT  VSADQRTRLMTTTERLGNMSDRI
Sbjct: 121 KSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDT+
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL
Match: A0A6J1CTL4 (vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.8e-69
Identity = 153/215 (71.16%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFEGYERQYCELSA+LSRKCTSA  L+G                             
Sbjct: 1   MSEVFEGYERQYCELSASLSRKCTSAGGLEG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK +LLAKLREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKGILLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRI+ GNLNAAARDELLESGLADT T SADQRTRLMTTTERLG  SDRI
Sbjct: 121 KSDLNNLKSEVKRISSGNLNAAARDELLESGLADTLTASADQRTRLMTTTERLGKTSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDS+RTMLETEDLGVSIL+DLHSQRQSLL  HDT+
Sbjct: 181 KDSRRTMLETEDLGVSILQDLHSQRQSLLHAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL
Match: A0A6J1J747 (vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 8.6e-69
Identity = 155/215 (72.09%), Postives = 160/215 (74.42%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFEGYERQYCELSANL RKCTSASALDG                             
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQ LSEI GGIDEAESLIRKMNLDAR+LQPSVKA LLAKLREY
Sbjct: 61  --------------EQKKQTLSEITGGIDEAESLIRKMNLDARTLQPSVKANLLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLK EVKRIT GNLNAAAR+ELLESGLADT  VSADQRTRLM+TTERLG  SDRI
Sbjct: 121 KSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQRTRLMSTTERLGKSSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQ LLR HDT+
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL
Match: A0A0A0LC29 (V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 8.6e-69
Identity = 154/215 (71.63%), Postives = 160/215 (74.42%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFE YERQYCELSANL RKCTS++ALDG                             
Sbjct: 1   MSEVFERYERQYCELSANLFRKCTSSTALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGG+DEAESLIRKMNLDARSLQPSVK  LLAKLREY
Sbjct: 61  --------------EQKKQKLSEIKGGVDEAESLIRKMNLDARSLQPSVKIGLLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRIT GN+NA ARDELLESGLADT  VSADQRTRLMTTTERLGNMS RI
Sbjct: 121 KSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSGRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQR MLETEDLGVSILEDLHSQRQSLL  HDT+
Sbjct: 181 KDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. NCBI nr
Match: XP_038905553.1 (vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida])

HSP 1 Score: 282.0 bits (720), Expect = 5.9e-72
Identity = 160/215 (74.42%), Postives = 165/215 (76.74%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFEGYERQYCELSANLSRKC+SASALDG                             
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCSSASALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIK GIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY
Sbjct: 61  --------------EQKKQKLSEIKSGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEV+RI  GNLNAAARDELLESGLADT  VSADQRTRLMTTTERLGNMS+RI
Sbjct: 121 KSDLNNLKSEVQRINFGNLNAAARDELLESGLADTLNVSADQRTRLMTTTERLGNMSNRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDT+
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLHAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. NCBI nr
Match: XP_038905554.1 (vesicle transport v-SNARE 11-like isoform X2 [Benincasa hispida])

HSP 1 Score: 282.0 bits (720), Expect = 5.9e-72
Identity = 160/214 (74.77%), Postives = 164/214 (76.64%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFEGYERQYCELSANLSRKC+SASALDG                             
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCSSASALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIK GIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY
Sbjct: 61  --------------EQKKQKLSEIKSGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEV+RI  GNLNAAARDELLESGLADT  VSADQRTRLMTTTERLGNMS+RI
Sbjct: 121 KSDLNNLKSEVQRINFGNLNAAARDELLESGLADTLNVSADQRTRLMTTTERLGNMSNRI 171

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 226
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDT
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLHAHDT 171

[Close]

BLAST of Lsi03G015040 vs. NCBI nr
Match: KAA0053780.1 (vesicle transport v-SNARE 13-like [Cucumis melo var. makuwa] >TYK25624.1 vesicle transport v-SNARE 13-like [Cucumis melo var. makuwa])

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-71
Identity = 159/215 (73.95%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFE YERQYCELSANLSRKCTSA+ALDG                             
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK VLLA+LREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKIVLLARLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRIT GN+NA ARDELLESGLADT  VSADQRTRLMTTTERLGNMSDRI
Sbjct: 121 KSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDTV
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTV 172

[Close]

BLAST of Lsi03G015040 vs. NCBI nr
Match: XP_008443391.1 (PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-70
Identity = 158/215 (73.49%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFE YERQYCELSANLSRKCTSA+ALDG                             
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK VLLA+LREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKIVLLARLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRIT GN+NA ARDELLESGLADT  VSADQRTRLMTTTERLGNMSDRI
Sbjct: 121 KSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDSQRTMLETEDLGVSILEDLHSQRQSLL  HDT+
Sbjct: 181 KDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. NCBI nr
Match: XP_022144558.1 (vesicle transport v-SNARE 11-like [Momordica charantia] >XP_022144560.1 vesicle transport v-SNARE 11-like [Momordica charantia])

HSP 1 Score: 271.6 bits (693), Expect = 7.9e-69
Identity = 153/215 (71.16%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MSEVFEGYERQYCELSA+LSRKCTSA  L+G                             
Sbjct: 1   MSEVFEGYERQYCELSASLSRKCTSAGGLEG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIKGGIDEAESLIRKM+LDARSLQPSVK +LLAKLREY
Sbjct: 61  --------------EQKKQKLSEIKGGIDEAESLIRKMDLDARSLQPSVKGILLAKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+NLKSEVKRI+ GNLNAAARDELLESGLADT T SADQRTRLMTTTERLG  SDRI
Sbjct: 121 KSDLNNLKSEVKRISSGNLNAAARDELLESGLADTLTASADQRTRLMTTTERLGKTSDRI 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDS+RTMLETEDLGVSIL+DLHSQRQSLL  HDT+
Sbjct: 181 KDSRRTMLETEDLGVSILQDLHSQRQSLLHAHDTL 172

[Close]

BLAST of Lsi03G015040 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 228.8 bits (582), Expect = 5.5e-60
Identity = 125/215 (58.14%), Postives = 154/215 (71.63%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS+VF+GYERQYCELSA+LS+KC+SA +LDG                             
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDG----------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         EQKKQKLSEIK G++ AE LIRKM+L+AR+L P++K+ LL KLRE+
Sbjct: 61  --------------EQKKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLVKLREF 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+N K+EVKRIT G LNAAARDELLE+G+ADT T SADQR RLM +TERLG  +DR+
Sbjct: 121 KSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMMSTERLGRTTDRV 172

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
           KDS+RTM+ETE++GVSIL+DLH QRQSLLR H+T+
Sbjct: 181 KDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETL 172

[Close]

BLAST of Lsi03G015040 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 189.5 bits (480), Expect = 3.7e-48
Identity = 116/259 (44.79%), Postives = 157/259 (60.62%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS+VFEGYERQYCELS NLSRKC SAS L  G                            
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNG---------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                         E+KK K++EIK GIDEA+ LIRKM+L+ARSLQPS KAV L+KLREY
Sbjct: 61  --------------EEKKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREY 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KSDL+ LK E KR++  +   ++R+EL+ESG+AD   VSADQR RL  + ERL   SDRI
Sbjct: 121 KSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAMSVERLDQSSDRI 180

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSLLRGHD-------------TVILLISWKLSINL 251
           ++S+R MLETE++G+SI++DL  QRQ+LL  H+              V+  +S +++ N 
Sbjct: 181 RESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAIDKSKKVLTAMSRRMTRNK 217

Query: 252 ALLISLVLKYIGAFSISLS 258
            ++ S+++  + A  + +S
Sbjct: 241 WIITSVIVALVLAIILIIS 217

[Close]

BLAST of Lsi03G015040 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-42
Identity = 86/121 (71.07%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 106 IRKMNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLAD 165
           ++KM+L+AR+L P+VK+ LL KLREYKSDL+N K+EVKRIT GNLNA ARDELLE+G+AD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 166 TFTVSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDT 225
           T T SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 226 V 227
           +
Sbjct: 146 L 146

[Close]

BLAST of Lsi03G015040 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41
Identity = 85/118 (72.03%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 109 MNLDARSLQPSVKAVLLAKLREYKSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFT 168
           M+L+AR+L P+VK+ LL KLREYKSDL+N K+EVKRIT GNLNA ARDELLE+G+ADT T
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 169 VSADQRTRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLRGHDTV 227
            SADQR+RLM +T+ LG  +DRIKDS+RT+LETE+LGVSIL+DLH QRQSLLR H+T+
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETL 118

[Close]

BLAST of Lsi03G015040 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 86/208 (41.35%), Postives = 118/208 (56.73%), Query Frame = 0


Query: 12  MSEVFEGYERQYCELSANLSRKCTSASALDGGIMIQFFFSEYPYSLLSLKCVKYCDFLGF 71
           MS VF  Y++QY ELS NLS+KC+ A +L GG                            
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGG---------------------------- 60

Query: 72  SLEFDCFCFLRDSAEQKKQKLSEIKGGIDEAESLIRKMNLDARSLQPSVKAVLLAKLREY 131
                          +KK+KLSEI   ++ AE LI KM+  A +L P++K++LL KL+E 
Sbjct: 61  ---------------EKKEKLSEITYDLENAEKLISKMDHAASNLPPNIKSILLEKLKES 120

Query: 132 KSDLSNLKSEVKRITLGNLNAAARDELLESGLADTFTVSADQRTRLMTTTERLGNMSDRI 191
           KS L  L++E+KR T  NL    R+E+LE+  AD     ADQR+RLM +TE L    + I
Sbjct: 121 KSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQRSRLMKSTEGLVRTREMI 161

Query: 192 KDSQRTMLETEDLGVSILEDLHSQRQSL 220
           KDSQR +LETE++G+SILE+L  Q++SL
Sbjct: 181 KDSQRKLLETENIGISILENLQRQKESL 161

The following BLAST results are available for this feature:

BLAST of Lsi03G015040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	2.7e-59	58.60	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	7.7e-59	58.14	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	5.2e-47	44.79	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
O89116	5.4e-12	29.50	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]
Q96AJ9	1.6e-11	28.78	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]

BLAST of Lsi03G015040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPX4	2.4e-71	73.95	Vesicle transport v-SNARE 13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B8M5	5.4e-71	73.49	vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 S...	[more]
A0A6J1CTL4	3.8e-69	71.16	vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211...	[more]
A0A6J1J747	8.6e-69	72.09	vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE...	[more]
A0A0A0LC29	8.6e-69	71.63	V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=...	[more]

BLAST of Lsi03G015040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905553.1	5.9e-72	74.42	vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida]	[more]
XP_038905554.1	5.9e-72	74.77	vesicle transport v-SNARE 11-like isoform X2 [Benincasa hispida]	[more]
KAA0053780.1	5.0e-71	73.95	vesicle transport v-SNARE 13-like [Cucumis melo var. makuwa] >TYK25624.1 vesicle...	[more]
XP_008443391.1	1.1e-70	73.49	PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo]	[more]
XP_022144558.1	7.9e-69	71.16	vesicle transport v-SNARE 11-like [Momordica charantia] >XP_022144560.1 vesicle ...	[more]

BLAST of Lsi03G015040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	5.5e-60	58.14	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	3.7e-48	44.79	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	1.8e-42	71.07	vesicle transport V-snare 13	[more]
AT3G29100.2	2.0e-41	72.03	vesicle transport V-snare 13	[more]
AT5G39630.1	1.8e-31	41.35	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	GENE3D	1.20.5.110		coord: 171..227 e-value: 1.3E-13 score: 52.9
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 182..225 e-value: 1.0E-11 score: 45.0
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 12..44
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 12..44
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 71..226
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 71..226
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 181..226 e-value: 1.17861E-16 score: 70.6356
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 185..226
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 11..150 e-value: 2.1E-28 score: 100.5
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 84..144 e-value: 1.4E-16 score: 60.6
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 84..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G015040.1	Lsi03G015040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding