Lsi03G013840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G013840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1645)
Locationchr03: 24815898 .. 24816731 (+)
RNA-Seq ExpressionLsi03G013840
SyntenyLsi03G013840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCGAAGTTCAAATGCAAGAAGAAGATTTCGGAATGTGTCCGAGCTTCAACAGTTACTCCATCGGAACAACCGTAGACGCCGCCATAAGAGCCGGCGGCTGCTCTTTTTTCGATTTCAATCAATCGCAGTCGCCAAACAAAGCAAAGGATCAGGAAGAAGACGACGATAATTTCGAATTCGTCTCGCTCCAGACACCTGCCGATGGCGGTGGTTTAATCGCTCCTGTGTTTCCGATTTTCAATTCCGATCTTCTGTTTGAGGAACGTCAAGTTGAAAAACCAGAAATCGACGGTCGAGATTCAGCAATCGTGCAGCCGATTCGAATTCCTCTGGAGAAGCTTCTAATCAGAGATCGCGATTACGATCCGCAGTCACCTTCGTCTTCGTCGTCTTCGTCTTCATCGTCGTTAGTGGACGAATTGGAAGGAGTTCCATCTGAAACGTACTGCGTTTGGAAACCTAAATCCATCGGAACGCCAAATCTGGCTTGTAAGAAGAGCCGATCCACTGGATCATCGTCGACAAAGCGTTGGGGAATCCGAGACCTTCTACGGAGAAGCCACAGCGACGGAAAACACTCGTACATCTCCTTCACGCCGTCGACGAGTTCAAATTCAACGACGAAGGCAAAAGAAATGACCAAATCAGAGACAAAATCGAGGAAGGAATTGAAGGAGAAGAAAGATAACTCCGGCGGAAATCAGAAGAGGATTTTCTCTGCACACGAATCGTTCTACGTGAGGAATCGTACGTTGAAAGAAGAAGGTAAGAGAAAATCATATCTTCCTTACAAATTACAAGCCGGAATTGGTTGGTTGTTGGAGTAA

mRNA sequence

ATGTCTTTCGAAGTTCAAATGCAAGAAGAAGATTTCGGAATGTGTCCGAGCTTCAACAGTTACTCCATCGGAACAACCGTAGACGCCGCCATAAGAGCCGGCGGCTGCTCTTTTTTCGATTTCAATCAATCGCAGTCGCCAAACAAAGCAAAGGATCAGGAAGAAGACGACGATAATTTCGAATTCGTCTCGCTCCAGACACCTGCCGATGGCGGTGGTTTAATCGCTCCTGTGTTTCCGATTTTCAATTCCGATCTTCTGTTTGAGGAACGTCAAGTTGAAAAACCAGAAATCGACGGTCGAGATTCAGCAATCGTGCAGCCGATTCGAATTCCTCTGGAGAAGCTTCTAATCAGAGATCGCGATTACGATCCGCAGTCACCTTCGTCTTCGTCGTCTTCGTCTTCATCGTCGTTAGTGGACGAATTGGAAGGAGTTCCATCTGAAACGTACTGCGTTTGGAAACCTAAATCCATCGGAACGCCAAATCTGGCTTGTAAGAAGAGCCGATCCACTGGATCATCGTCGACAAAGCGTTGGGGAATCCGAGACCTTCTACGGAGAAGCCACAGCGACGGAAAACACTCGTACATCTCCTTCACGCCGTCGACGAGTTCAAATTCAACGACGAAGGCAAAAGAAATGACCAAATCAGAGACAAAATCGAGGAAGGAATTGAAGGAGAAGAAAGATAACTCCGGCGGAAATCAGAAGAGGATTTTCTCTGCACACGAATCGTTCTACGTGAGGAATCGTACGTTGAAAGAAGAAGGTAAGAGAAAATCATATCTTCCTTACAAATTACAAGCCGGAATTGGTTGGTTGTTGGAGTAA

Coding sequence (CDS)

ATGTCTTTCGAAGTTCAAATGCAAGAAGAAGATTTCGGAATGTGTCCGAGCTTCAACAGTTACTCCATCGGAACAACCGTAGACGCCGCCATAAGAGCCGGCGGCTGCTCTTTTTTCGATTTCAATCAATCGCAGTCGCCAAACAAAGCAAAGGATCAGGAAGAAGACGACGATAATTTCGAATTCGTCTCGCTCCAGACACCTGCCGATGGCGGTGGTTTAATCGCTCCTGTGTTTCCGATTTTCAATTCCGATCTTCTGTTTGAGGAACGTCAAGTTGAAAAACCAGAAATCGACGGTCGAGATTCAGCAATCGTGCAGCCGATTCGAATTCCTCTGGAGAAGCTTCTAATCAGAGATCGCGATTACGATCCGCAGTCACCTTCGTCTTCGTCGTCTTCGTCTTCATCGTCGTTAGTGGACGAATTGGAAGGAGTTCCATCTGAAACGTACTGCGTTTGGAAACCTAAATCCATCGGAACGCCAAATCTGGCTTGTAAGAAGAGCCGATCCACTGGATCATCGTCGACAAAGCGTTGGGGAATCCGAGACCTTCTACGGAGAAGCCACAGCGACGGAAAACACTCGTACATCTCCTTCACGCCGTCGACGAGTTCAAATTCAACGACGAAGGCAAAAGAAATGACCAAATCAGAGACAAAATCGAGGAAGGAATTGAAGGAGAAGAAAGATAACTCCGGCGGAAATCAGAAGAGGATTTTCTCTGCACACGAATCGTTCTACGTGAGGAATCGTACGTTGAAAGAAGAAGGTAAGAGAAAATCATATCTTCCTTACAAATTACAAGCCGGAATTGGTTGGTTGTTGGAGTAA

Protein sequence

MSFEVQMQEEDFGMCPSFNSYSIGTTVDAAIRAGGCSFFDFNQSQSPNKAKDQEEDDDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKLLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEKKDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE
Homology
BLAST of Lsi03G013840 vs. ExPASy TrEMBL
Match: A0A6J1J5P2 (uncharacterized protein LOC111481526 OS=Cucurbita maxima OX=3661 GN=LOC111481526 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.5e-102
Identity = 216/296 (72.97%), Postives = 234/296 (79.05%), Query Frame = 0

Query: 5   VQMQEEDFGMCPSFNSYSIGTTVDAAIRA-----GGCSFFDFNQSQSPNKAKDQEEDDDN 64
           +QMQEEDFG+CPSFNSYS G T DAA RA      GCS FDF++S S NKA+DQ +DDD 
Sbjct: 3   LQMQEEDFGLCPSFNSYSSGATADAARRASGEFSSGCSSFDFDRSPSLNKAEDQADDDD- 62

Query: 65  FEFVSLQTPADG----GGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEK 124
           FEFVSLQ   D     GGLIAPVFP+F+S+LLFEERQVE+ EIDGRDSAIVQPI+IPLEK
Sbjct: 63  FEFVSLQKSGDSEVFRGGLIAPVFPVFDSELLFEERQVERAEIDGRDSAIVQPIQIPLEK 122

Query: 125 LLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSS 184
           LLIRDRD DP   SSSSSSSSSS  DELEGVPS TYCVW PKS+GTPNLACKKSRSTGSS
Sbjct: 123 LLIRDRDNDPLYSSSSSSSSSSS-ADELEGVPSGTYCVWNPKSVGTPNLACKKSRSTGSS 182

Query: 185 STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK------ 244
           STKRWGI DLLRRSHS G H+Y+SFT STS  ST KAKE+ KSETKS KELKEK      
Sbjct: 183 STKRWGILDLLRRSHSSGNHTYVSFTSSTSLYSTKKAKEI-KSETKSAKELKEKIYYSRE 242

Query: 245 --------KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
                       GG+ K+  SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLL+
Sbjct: 243 ARIGNKSRGQRPGGDHKKNISAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLD 295

BLAST of Lsi03G013840 vs. ExPASy TrEMBL
Match: A0A5D3BNK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00400 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.1e-100
Identity = 214/288 (74.31%), Postives = 235/288 (81.60%), Query Frame = 0

Query: 1   MSFEVQMQEEDFGMCPSFNSYSIG-TTVDAAIRAGGCSFFDFNQSQSPNKAK--DQEE-D 60
           MS ++ +Q++DFGMCPSFN+YS G TT DAA+RAG  SFFDFN   +PNK+   DQE+ D
Sbjct: 1   MSLKLHIQQDDFGMCPSFNTYSTGSTTSDAALRAGAFSFFDFNPPHTPNKSNLHDQEQYD 60

Query: 61  DDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKL 120
           DD+FEFVSLQ P    GL  P FP+FNSDLLF+E +VE PEIDGRDS IVQPIRIPLEKL
Sbjct: 61  DDDFEFVSLQPPP---GLTPPAFPLFNSDLLFDEPRVETPEIDGRDSPIVQPIRIPLEKL 120

Query: 121 LIRDRDYDPQSPSSSSSSSSS-------SLVDELEGVPSETYCVWKPKSIGTPNLACKKS 180
           LIRDRD +P+S SSSSSSSSS       S VDELEGVPSETYCVWKPKSIGTPN ACKKS
Sbjct: 121 LIRDRDNNPRSSSSSSSSSSSSSSSSSLSSVDELEGVPSETYCVWKPKSIGTPNPACKKS 180

Query: 181 RSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK 240
           RSTGSSSTKRWGIRDLLRRS SDGK SY+SFTPSTSS    KAKE+ KSETKSRK    K
Sbjct: 181 RSTGSSSTKRWGIRDLLRRSQSDGKQSYVSFTPSTSSK---KAKEI-KSETKSRK----K 240

Query: 241 KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
            + SGG+   + SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE
Sbjct: 241 PNKSGGD---LLSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 274

BLAST of Lsi03G013840 vs. ExPASy TrEMBL
Match: A0A5A7UF01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00400 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100
Identity = 213/288 (73.96%), Postives = 234/288 (81.25%), Query Frame = 0

Query: 1   MSFEVQMQEEDFGMCPSFNSYSIG-TTVDAAIRAGGCSFFDFNQSQSPNKAK--DQEE-D 60
           MS ++ +Q++DFGMCPSFN+YS G TT DAA+RAG  SFFDFN   +PNK+   DQE+ D
Sbjct: 1   MSLKLHIQQDDFGMCPSFNTYSTGSTTSDAALRAGAFSFFDFNPPHTPNKSNLHDQEQYD 60

Query: 61  DDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKL 120
           DD+FEFVSLQ P    GL  P FP+FNSDLLF+E +VE PEIDGRDS IVQPIRIPLEKL
Sbjct: 61  DDDFEFVSLQPPP---GLTPPAFPLFNSDLLFDEPRVETPEIDGRDSPIVQPIRIPLEKL 120

Query: 121 LIRDRDYDPQSPSSSSSSSSS-------SLVDELEGVPSETYCVWKPKSIGTPNLACKKS 180
           LIRDRD +P+S SSSSSSSSS       S VDELEGVPSETYCVWKPKSIGTPN ACKKS
Sbjct: 121 LIRDRDNNPRSSSSSSSSSSSSSSSSSLSSVDELEGVPSETYCVWKPKSIGTPNPACKKS 180

Query: 181 RSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK 240
           RSTGSSSTKRWGIRDLLRRS SDGK SY+SFTPST S    KAKE+ KSETKSRK    K
Sbjct: 181 RSTGSSSTKRWGIRDLLRRSQSDGKQSYVSFTPSTPSK---KAKEI-KSETKSRK----K 240

Query: 241 KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
            + SGG+   + SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE
Sbjct: 241 PNKSGGD---LLSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 274

BLAST of Lsi03G013840 vs. ExPASy TrEMBL
Match: A0A6J1F8Z7 (uncharacterized protein LOC111441909 OS=Cucurbita moschata OX=3662 GN=LOC111441909 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100
Identity = 212/296 (71.62%), Postives = 230/296 (77.70%), Query Frame = 0

Query: 5   VQMQEEDFGMCPSFNSYSIGTTVDAAIRAG-----GCSFFDFNQSQSPNKAKDQEEDDDN 64
           +QM EEDFGMCPSFNSYS G T DAA RAG     GCS FDF++  S  KA+DQ +DDD 
Sbjct: 3   LQMLEEDFGMCPSFNSYSSGATADAARRAGGEFSSGCSSFDFDRLPSLKKAEDQADDDD- 62

Query: 65  FEFVSLQTPADG----GGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEK 124
           FEFVSLQ   D     GGLIAP FP+F+S+LLFEERQVE+ EIDGRDSAIVQPI+IPLEK
Sbjct: 63  FEFVSLQKSGDSDIFRGGLIAPAFPVFDSELLFEERQVERAEIDGRDSAIVQPIQIPLEK 122

Query: 125 LLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSS 184
           LLIRDRD DP S SSSSSS+     DELEGVPS TYCVWKPKS+GTPNLACKKSRSTGSS
Sbjct: 123 LLIRDRDNDPLSSSSSSSSA-----DELEGVPSGTYCVWKPKSVGTPNLACKKSRSTGSS 182

Query: 185 STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK------ 244
           STKRWGI DLLRRSHS G H+Y+SFT STS  ST KAKE+ KSETKS KELKEK      
Sbjct: 183 STKRWGILDLLRRSHSSGNHTYVSFTSSTSLYSTKKAKEI-KSETKSAKELKEKIYYSSE 242

Query: 245 --------KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
                       GG+ K+  SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLL+
Sbjct: 243 ARIGNKSRGQRPGGDHKKNISAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLD 291

BLAST of Lsi03G013840 vs. ExPASy TrEMBL
Match: A0A1S3B915 (uncharacterized protein LOC103487091 OS=Cucumis melo OX=3656 GN=LOC103487091 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 4.1e-100
Identity = 213/288 (73.96%), Postives = 234/288 (81.25%), Query Frame = 0

Query: 1   MSFEVQMQEEDFGMCPSFNSYSIG-TTVDAAIRAGGCSFFDFNQSQSPNKAK--DQEE-D 60
           MS ++ +Q++DFGMCPSFN+YS G TT DAA+RAG  SFFDFN   +PNK+   DQE+ D
Sbjct: 1   MSLKLHIQQDDFGMCPSFNTYSTGSTTSDAALRAGAFSFFDFNPPHTPNKSNLHDQEQYD 60

Query: 61  DDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKL 120
           DD+FEFVSLQ P    GL  P FP+FNSDLLF+E +VE PEIDGRDS IVQPIRIPLEKL
Sbjct: 61  DDDFEFVSLQPPP---GLTPPAFPLFNSDLLFDEPRVETPEIDGRDSPIVQPIRIPLEKL 120

Query: 121 LIRDRDYDPQSPSSSSSSSSS-------SLVDELEGVPSETYCVWKPKSIGTPNLACKKS 180
           LIRDRD +P+S SSSSSSSSS       S VDELEGVPSETYCVWKPKSIGTPN ACKKS
Sbjct: 121 LIRDRDNNPRSSSSSSSSSSSSSSSSSLSSVDELEGVPSETYCVWKPKSIGTPNPACKKS 180

Query: 181 RSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK 240
           RSTGSSSTKRWGIRDLLRRS SDGK SY+SFTPST S    KAKE+ KSETKSRK    K
Sbjct: 181 RSTGSSSTKRWGIRDLLRRSQSDGKQSYVSFTPSTPSK---KAKEI-KSETKSRK----K 240

Query: 241 KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
            + SGG+   + SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE
Sbjct: 241 PNKSGGD---LLSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 274

BLAST of Lsi03G013840 vs. NCBI nr
Match: XP_038905195.1 (uncharacterized protein LOC120091294 [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.3e-128
Identity = 248/285 (87.02%), Postives = 258/285 (90.53%), Query Frame = 0

Query: 1   MSFEVQMQEEDFGMCPSFNSYSIGTTVDAAIRAGGCSFFDFNQSQSPNKAKDQEEDDDNF 60
           M+ +VQMQEEDFGMCPSFNSYS GTT  AAIRA GCS FDFNQS SPNKAKDQEEDDD+F
Sbjct: 1   MALQVQMQEEDFGMCPSFNSYSTGTTSAAAIRAAGCSVFDFNQSHSPNKAKDQEEDDDDF 60

Query: 61  EFVSLQTPAD------GGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLE 120
           EFVSL+ PAD      GGGLI P FPIFNSDLLFEE QVEKPEIDGRDSAI QPIRIPLE
Sbjct: 61  EFVSLRKPADCDDVFGGGGLIPPAFPIFNSDLLFEEPQVEKPEIDGRDSAIEQPIRIPLE 120

Query: 121 KLLIRDRDYDPQSPS--SSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRST 180
           KLLIRDRDYDPQSPS  SSSSSSSSS VDELEGVPSETYCVWKPKSIGTPNLACKKSRST
Sbjct: 121 KLLIRDRDYDPQSPSSTSSSSSSSSSSVDELEGVPSETYCVWKPKSIGTPNLACKKSRST 180

Query: 181 GSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEKKDN 240
           GSSSTKRWGIRDLLRRSHSDGK SYISFTPSTSSNST K KE+ KSETKS ++LKEKKD 
Sbjct: 181 GSSSTKRWGIRDLLRRSHSDGKQSYISFTPSTSSNSTKKVKEI-KSETKSTRQLKEKKDY 240

Query: 241 SGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
           SGG+QK+IFSAHESFYVRNRTL+EEGKRKSYLPYKLQAGIGWLLE
Sbjct: 241 SGGDQKKIFSAHESFYVRNRTLREEGKRKSYLPYKLQAGIGWLLE 284

BLAST of Lsi03G013840 vs. NCBI nr
Match: KAG7017763.1 (hypothetical protein SDJN02_19629, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102
Identity = 218/296 (73.65%), Postives = 235/296 (79.39%), Query Frame = 0

Query: 5   VQMQEEDFGMCPSFNSYSIGTTVDAAIRAG-----GCSFFDFNQSQSPNKAKDQEEDDDN 64
           +QMQEEDFGMCPSFNSYS G T DAA RAG     GCS FDF++  S  KA+DQ +DDD 
Sbjct: 3   LQMQEEDFGMCPSFNSYSSGATADAARRAGGEFSSGCSSFDFDRLPSLKKAEDQADDDD- 62

Query: 65  FEFVSLQTPADG----GGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEK 124
           FEFVSLQ   D     GGLIAPVFP+F+S+LLFEERQVE+ EIDGRDSAIVQPI+IPLEK
Sbjct: 63  FEFVSLQKSGDSDIFRGGLIAPVFPVFDSELLFEERQVERAEIDGRDSAIVQPIQIPLEK 122

Query: 125 LLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSS 184
           LLIRDRD DP S SSSSSSSSSS VDELEGVPS TYCVWKPKS+GTPNLACKKSRSTGSS
Sbjct: 123 LLIRDRDNDPLSSSSSSSSSSSS-VDELEGVPSGTYCVWKPKSVGTPNLACKKSRSTGSS 182

Query: 185 STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKE------- 244
           STKRWGI DLLRRSHS G  +Y+SFT STS  ST KAKE+ KSETKS KELKE       
Sbjct: 183 STKRWGILDLLRRSHSSGNRTYVSFTSSTSLYSTKKAKEI-KSETKSAKELKEKIYYSSE 242

Query: 245 -------KKDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
                  K    GG+ K+  SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLL+
Sbjct: 243 ARMGNKSKGQRPGGDHKKNISAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLD 295

BLAST of Lsi03G013840 vs. NCBI nr
Match: XP_022982753.1 (uncharacterized protein LOC111481526 [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 3.1e-102
Identity = 216/296 (72.97%), Postives = 234/296 (79.05%), Query Frame = 0

Query: 5   VQMQEEDFGMCPSFNSYSIGTTVDAAIRA-----GGCSFFDFNQSQSPNKAKDQEEDDDN 64
           +QMQEEDFG+CPSFNSYS G T DAA RA      GCS FDF++S S NKA+DQ +DDD 
Sbjct: 3   LQMQEEDFGLCPSFNSYSSGATADAARRASGEFSSGCSSFDFDRSPSLNKAEDQADDDD- 62

Query: 65  FEFVSLQTPADG----GGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEK 124
           FEFVSLQ   D     GGLIAPVFP+F+S+LLFEERQVE+ EIDGRDSAIVQPI+IPLEK
Sbjct: 63  FEFVSLQKSGDSEVFRGGLIAPVFPVFDSELLFEERQVERAEIDGRDSAIVQPIQIPLEK 122

Query: 125 LLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSS 184
           LLIRDRD DP   SSSSSSSSSS  DELEGVPS TYCVW PKS+GTPNLACKKSRSTGSS
Sbjct: 123 LLIRDRDNDPLYSSSSSSSSSSS-ADELEGVPSGTYCVWNPKSVGTPNLACKKSRSTGSS 182

Query: 185 STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK------ 244
           STKRWGI DLLRRSHS G H+Y+SFT STS  ST KAKE+ KSETKS KELKEK      
Sbjct: 183 STKRWGILDLLRRSHSSGNHTYVSFTSSTSLYSTKKAKEI-KSETKSAKELKEKIYYSRE 242

Query: 245 --------KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
                       GG+ K+  SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLL+
Sbjct: 243 ARIGNKSRGQRPGGDHKKNISAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLD 295

BLAST of Lsi03G013840 vs. NCBI nr
Match: XP_023527310.1 (uncharacterized protein LOC111790582 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 4.5e-101
Identity = 215/296 (72.64%), Postives = 232/296 (78.38%), Query Frame = 0

Query: 5   VQMQEEDFGMCPSFNSYSIGTTVDAAIRAG-----GCSFFDFNQSQSPNKAKDQEEDDDN 64
           +QMQEEDFGMCPSFNSYS G T DAA RAG     GCS FDF+   S  KA+DQ +DDD 
Sbjct: 3   LQMQEEDFGMCPSFNSYSSGATADAARRAGGEFSSGCSSFDFDLLPSLKKAEDQADDDD- 62

Query: 65  FEFVSLQTPADG----GGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEK 124
           FEFVSLQ   D     GGLIAP FP+F+S+LLFEERQVE+ EIDGRDSAIVQPI+IPLEK
Sbjct: 63  FEFVSLQKSGDSDIFRGGLIAPAFPVFDSELLFEERQVERAEIDGRDSAIVQPIQIPLEK 122

Query: 125 LLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGTPNLACKKSRSTGSS 184
           LLIRDRD DP S SSSSSSSSSS  DELEGVPS TYCVWKPKS+GTPNLACKKSRSTGSS
Sbjct: 123 LLIRDRDNDPLSSSSSSSSSSSS-ADELEGVPSGTYCVWKPKSVGTPNLACKKSRSTGSS 182

Query: 185 STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK------ 244
           STKRWGI DLLRRSHS G  +Y+SFT STS  ST KAKE+ KSETKS K+LKEK      
Sbjct: 183 STKRWGILDLLRRSHSSGNRTYVSFTSSTSLYSTKKAKEI-KSETKSAKQLKEKIYYSSE 242

Query: 245 --------KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
                       GG+ K+  SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLL+
Sbjct: 243 ARIGNKSRGQRPGGDHKKNISAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLD 295

BLAST of Lsi03G013840 vs. NCBI nr
Match: TYK00837.1 (uncharacterized protein E5676_scaffold1545G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-100
Identity = 214/288 (74.31%), Postives = 235/288 (81.60%), Query Frame = 0

Query: 1   MSFEVQMQEEDFGMCPSFNSYSIG-TTVDAAIRAGGCSFFDFNQSQSPNKAK--DQEE-D 60
           MS ++ +Q++DFGMCPSFN+YS G TT DAA+RAG  SFFDFN   +PNK+   DQE+ D
Sbjct: 1   MSLKLHIQQDDFGMCPSFNTYSTGSTTSDAALRAGAFSFFDFNPPHTPNKSNLHDQEQYD 60

Query: 61  DDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKL 120
           DD+FEFVSLQ P    GL  P FP+FNSDLLF+E +VE PEIDGRDS IVQPIRIPLEKL
Sbjct: 61  DDDFEFVSLQPPP---GLTPPAFPLFNSDLLFDEPRVETPEIDGRDSPIVQPIRIPLEKL 120

Query: 121 LIRDRDYDPQSPSSSSSSSSS-------SLVDELEGVPSETYCVWKPKSIGTPNLACKKS 180
           LIRDRD +P+S SSSSSSSSS       S VDELEGVPSETYCVWKPKSIGTPN ACKKS
Sbjct: 121 LIRDRDNNPRSSSSSSSSSSSSSSSSSLSSVDELEGVPSETYCVWKPKSIGTPNPACKKS 180

Query: 181 RSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEK 240
           RSTGSSSTKRWGIRDLLRRS SDGK SY+SFTPSTSS    KAKE+ KSETKSRK    K
Sbjct: 181 RSTGSSSTKRWGIRDLLRRSQSDGKQSYVSFTPSTSSK---KAKEI-KSETKSRK----K 240

Query: 241 KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 278
            + SGG+   + SAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE
Sbjct: 241 PNKSGGD---LLSAHESFYVRNRTLKEEGKRKSYLPYKLQAGIGWLLE 274

BLAST of Lsi03G013840 vs. TAIR 10
Match: AT3G27880.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 85/224 (37.95%), Postives = 118/224 (52.68%), Query Frame = 0

Query: 53  QEEDDDNFEFVSLQTPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIP 112
           +E+ D  FEF +  T + G G +  VFP+FN +L+  +   EK               IP
Sbjct: 32  KEKSDAEFEFSTAATSSSGDGGL--VFPVFNKNLISGDVSPEKV--------------IP 91

Query: 113 LEKLLIRDR-DYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKP---KSIGTPNLACKK 172
           L+ L +R+R D  P   + SSSS      DE + +PSE YC W P    +  +P+  C+K
Sbjct: 92  LKDLFLRERNDQQPPQQTYSSSSDEEEEDDEFDSIPSEIYCPWTPARSTADMSPSGGCRK 151

Query: 173 SRSTGSS-----STKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSR 232
           S+STGSS     STKRW +RD L+RS SDGK S     P+         ++     +KS+
Sbjct: 152 SKSTGSSSTSTWSTKRWRLRDFLKRSKSDGKQSLKFLNPTN--------RDDDDESSKSK 211

Query: 233 KELKEKKDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYK 268
           K++         +     SAHE FY+RN+ +KEE KRKSYLPYK
Sbjct: 212 KKV---------SVSVTVSAHEKFYLRNKAIKEEDKRKSYLPYK 222

BLAST of Lsi03G013840 vs. TAIR 10
Match: AT1G23710.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 102.1 bits (253), Expect = 7.6e-22
Identity = 85/238 (35.71%), Postives = 118/238 (49.58%), Query Frame = 0

Query: 51  KDQEEDDDNFEFVSLQ--------TPADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRD 110
           +D EE+++ F F  +           A   G I PVFP+FN DLLFE       E D  D
Sbjct: 56  EDDEEEEEEFSFACVNGEGSPITADEAFEDGQIRPVFPLFNRDLLFEYEN----EDDKND 115

Query: 111 SAIVQPIRIP-LEKLLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSIGT 170
           +  V     P L KL + DR+ +     +  S          E  P   YC W   ++  
Sbjct: 116 NVSVTDENRPRLRKLFVEDRNGNGDGEETEGS----------EKEPLGPYCSWTGGTVAE 175

Query: 171 PN-LACKKSRSTGSSSTKRWGIRDLLRRSHSDGKHSYI--------SFTPSTSSNSTTKA 230
            +   C+KS STG S  K W  RDL+ RS+SDG+ +++        + T S+SS+S+T A
Sbjct: 176 ASPETCRKSNSTGFS--KLWRFRDLVLRSNSDGRDAFVFLNNSNDKTRTRSSSSSSSTAA 235

Query: 231 KEMTKSETKSRKELKEKKDNSGGNQKRIF---SAHESFYVRNRTLKEEGKRKSYLPYK 268
           +E  K     +K+ KEK   S   +K+     SAHE  Y+RNR +KEE K +SYLPYK
Sbjct: 236 EENDKKVITEKKKGKEKTSTSSETKKKTTTTKSAHEKLYMRNRAMKEEVKHRSYLPYK 277

BLAST of Lsi03G013840 vs. TAIR 10
Match: AT1G70420.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-19
Identity = 78/229 (34.06%), Postives = 119/229 (51.97%), Query Frame = 0

Query: 51  KDQEEDDDNFEFVSLQT--------PADGGGLIAPVFPIFNSDLLFEERQVEKPEIDGRD 110
           KD E  +++F F S+           A   G I PV+P+FN ++ F++     PE     
Sbjct: 57  KDDEGREEDFSFASVNADNSPITADEAFEDGQIRPVYPLFNRNIFFDD-----PE----- 116

Query: 111 SAIVQPIRIPLEKLLIRDRDYDPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKSI--G 170
               + +R PL+KL +                S+++  +E E      YC W  +++   
Sbjct: 117 ---EKTLRSPLKKLFV---------------ESTTTEEEEEESDTVGPYCSWTNRTVEQA 176

Query: 171 TPNLACKKSRSTGSSSTKRWGIRDLLRRSHSDGKHSYISFTPSTSSNSTTKAKEMTKS-E 230
           +P   C+KS STG S  K W  RDL+ RS+SDGK +++  +  +SS S+T +     S  
Sbjct: 177 SPE-TCRKSNSTGFS--KLWRFRDLVLRSNSDGKDAFVFLSNGSSSTSSTSSTAARLSGV 236

Query: 231 TKSRKELKEK-KDNSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYK 268
            KS ++ KEK K +   ++ R  SAHE  Y+RNR ++EEGKR+SYLPYK
Sbjct: 237 VKSSEKGKEKTKTDKKKDKMRTKSAHEKLYMRNRAMREEGKRRSYLPYK 254

BLAST of Lsi03G013840 vs. TAIR 10
Match: AT5G62770.1 (Protein of unknown function (DUF1645) )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 78/276 (28.26%), Postives = 119/276 (43.12%), Query Frame = 0

Query: 16  PSFNSYSIGTTVDAAIRAGGCSFFDFNQSQSPNKAKDQEEDDDNFEFVSLQTPADGGGLI 75
           PSF S+S    + A        F D +Q+QS +     +++D +F F     P++     
Sbjct: 14  PSFGSFSSAVDLAAIAARVVEEFRDHDQTQSDSSPHRDDDNDSDFAF---DCPSNTCSQ- 73

Query: 76  APVFPIFNSDLLFEERQVEKPEIDGRDSAI-VQPI-----------RIPLEKLLIRDRDY 135
               P+  +D +F   Q+      G ++ +  QP            R  L KL+  DRD 
Sbjct: 74  ----PLATADEIFCNGQIRPLNPYGGNAPVESQPTSKITTLPPRRRRPALRKLMSEDRD- 133

Query: 136 DPQSPSSSSSSSSSSLVDELEGVPSETYCVWKPKS-----------IGTPNLACKKSRST 195
               P+S+SSS +    ++L GVP ETYCVWKPK              +P+ +  KS S 
Sbjct: 134 ----PASNSSSEAE---EDLTGVPPETYCVWKPKQSNSGDDDLQRLSSSPSHSKIKSHSA 193

Query: 196 GSSSTKRWGIRDLLR-RSHSDGKHSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEKKD 255
           G S  KRW +R+LL  RS S+G    +   P        K  + T S+ +  +E   K D
Sbjct: 194 GFS--KRWKLRNLLYVRSSSEGNDKLVFPAP-------VKKNDETVSDQREEEEPPSKVD 248

Query: 256 NSGGNQKRIFSAHESFYVRNRTLKEEGKRKSYLPYK 268
                ++R                EE KR++Y+PY+
Sbjct: 254 GEEEGRER----------------EETKRQTYVPYR 248

BLAST of Lsi03G013840 vs. TAIR 10
Match: AT5G14730.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01513.1); Has 85 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 74/261 (28.35%), Postives = 106/261 (40.61%), Query Frame = 0

Query: 16  PSFNSYSIGTTVDAAIRAGGCSFFDFNQSQSPNKAKDQEEDDDNFEFVSLQTPADGGGLI 75
           PSF+ Y+ G  V+ A+R          +S+S    K   E+D  FEF +L          
Sbjct: 15  PSFSFYASGDLVETAVRV-------IRESESYYSVKVDGENDKEFEFETLP--------- 74

Query: 76  APVFPIFNSDLLFEERQVEKPEIDGRDSAIVQPIRIPLEKLLIRDRDYDPQSPSSSSSSS 135
                    + LF    +        D   V   R+  + L       DP S +S S S 
Sbjct: 75  ------LGDESLFHFSTMTTTFKRSSDDDDVADDRVTSKNLFYGGWSVDPPSLTSPSESL 134

Query: 136 SSSLVDELEGV-PSETYCVWKPKSIGTPNLACKKSRSTGSSSTKRWGIRDLLRRSHSDGK 195
           SSS  D+ E + PS+ YC W P  I +P    +        S++R  I++ LRRSHSDG 
Sbjct: 135 SSSDSDDSENISPSKFYCFWSP--IRSP---ARDDSLKSKGSSRRCRIKEFLRRSHSDGA 194

Query: 196 HSYISFTPSTSSNSTTKAKEMTKSETKSRKELKEKKDNSGGNQKRIF--SAHESFYV--R 255
            S +S T   S                  K+L  +  + GG +      S + S  V  R
Sbjct: 195 VSTVSATKRCSF-----------------KDLLRRSHSDGGGEGSSISTSGNGSLVVKGR 231

Query: 256 NRTL----KEEGKRKSYLPYK 268
           N+T       + +RKSYLPY+
Sbjct: 255 NKTAAYKPDVDKRRKSYLPYR 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1J5P21.5e-10272.97uncharacterized protein LOC111481526 OS=Cucurbita maxima OX=3661 GN=LOC111481526... [more]
A0A5D3BNK51.1e-10074.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UF014.1e-10073.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1F8Z74.1e-10071.62uncharacterized protein LOC111441909 OS=Cucurbita moschata OX=3662 GN=LOC1114419... [more]
A0A1S3B9154.1e-10073.96uncharacterized protein LOC103487091 OS=Cucumis melo OX=3656 GN=LOC103487091 PE=... [more]
Match NameE-valueIdentityDescription
XP_038905195.14.3e-12887.02uncharacterized protein LOC120091294 [Benincasa hispida][more]
KAG7017763.11.1e-10273.65hypothetical protein SDJN02_19629, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022982753.13.1e-10272.97uncharacterized protein LOC111481526 [Cucurbita maxima][more]
XP_023527310.14.5e-10172.64uncharacterized protein LOC111790582 [Cucurbita pepo subsp. pepo][more]
TYK00837.12.2e-10074.31uncharacterized protein E5676_scaffold1545G00400 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT3G27880.11.0e-2637.95Protein of unknown function (DUF1645) [more]
AT1G23710.17.6e-2235.71Protein of unknown function (DUF1645) [more]
AT1G70420.13.5e-1934.06Protein of unknown function (DUF1645) [more]
AT5G62770.11.9e-0928.26Protein of unknown function (DUF1645) [more]
AT5G14730.11.3e-0828.35unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012442Protein of unknown function DUF1645, plantPFAMPF07816DUF1645coord: 72..265
e-value: 6.2E-26
score: 92.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..179
NoneNo IPR availablePANTHERPTHR33095FAMILY NOT NAMEDcoord: 7..268
NoneNo IPR availablePANTHERPTHR33095:SF72BNAC07G24810D PROTEINcoord: 7..268

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G013840.1Lsi03G013840.1mRNA