Lsi03G013300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G013300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein
Location	chr03: 24137071 .. 24139246 (-)
RNA-Seq Expression	Lsi03G013300
Synteny	Lsi03G013300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGATCAATTTTGGGGAGTTTTTCATTGTTTTCTCAATGAGGGTTTCCAATTAACTATTTCCCATGTCTCTTTAAGAAGTTTCATGATGTGTGGATGCCAATGGCAATGTATTATCAGCTCTGATGAAGCATTTAGTATTTCCCTGTTCTTGAAGTTGTTGCTGTATTGCTGTTTCTTAGTGATAGTAGCTTGTCGGTCGTGATGTCTACAACAATCACTTTCATGATAAAAAGTTGTCTTCTTCTCTCATGGGTCCTCCTTTCTTTCTTCAAATTCAAAAGCTAGTGATTCCAATAACTGTCTTCTATTACTTTGATTTTTATATAGGGGGTTTAATTCCCCAGTTTTCACTCCTTGGTTGCTCTATTTTTGTTTCATTTTCTGCAAGGATATCACAGAATACAATGTTTTATCTGCTCATCTCTTTCCTTTCCTTCATCCTTCTCTCTAAGTCCTTCTCTTACAAACGTCTGCTGCCATGGGAGGCCAAGATGAGCTTGTTGACTGCTTTACTTGTATCATGGTTCCACAAGAGCAGATTTGCTTTGAGTTTTTTTCAAGTTCTCAAGGTCTCTGATCCGCCATTAAAGAGCATCACATGTAGTACAAAACTGAGGAATTTAGAGGAGAAAAGGGAAACTTCACTCTTGGATTTACCCGAGTTGGTTCTGGAGTCGATTCTCGACCGGCTTTCGCCATTGGAGTTGTGTAAGATGGCAAATGTGTGTACTTATTTGAGGGATGTTTGTGAAGATGACTATTTCTGGGAGAAGCACATGAAGCGGAAATGGGGGAAGTTGATGGGTAATTCTGCTTGTAAGGAATGGCATTTGCATATAGCCCTTAAGAGGAGATCAGAGCTCTCAAGTCCATCTCAGAAGAAAGGTTTGTTCAGTTCATATTTTGGAAGTTGGTCTTTCCTGCTGATTAGACCAAAATCAGAAAGAAAAGGCAAGATCAGGAGCTCTTTACCAATTGATTCAATGAAGGCTTGGTATCAATCTCTTGAGAGTGGAAAGTTATGGTTCCCAGCTCAAGTCTACAATAGAGAGGTAAGAAAGCTGATGCAGGCTTTATAAATAGAGTCTTCTTGAATTCTGAGTTTATCATTCATTATTGTAGAATGCATTTAAGACAACAACTTAAGGCTATTAAGCATCCTTGTTTTATATATCTCTTCTATTTTTGCAGAGTGGTCATGCTGGTTTCATGTTGTCTTGTTATGATGCCCAAATATCCTACGATTCTCAGACCGACATGTTTAAGGCAAGGTATATCGAAAGACATGCTCACATTGACTCCAAAACTTGAATCCCGCACTTGTCTATGGAATATGGATTGCACATTATGTGATTTCCCTTTTACTAATGAAGACTTGCTTCTTCTGTCAATGGTGTATTTAATTAAGATATGCATTGATCTCAGATATCCACCACACGGGCGACGGGCGATAGAGGAAAATATTCTCTGGAATAGGCTAAGAGCACCGCCTGTTGATATTCCTCCCCATGTTCTTCATGTCTCTGAATGCTTAGCTGACTTGAAACCTGGTGATCATGTCGAGATCCAATGGAGAAAAAGCAAGGAGTTTTCTTATGGTGTGTTTGTCAACTCCAAACTCTTGAAAAAAATGTAGTTTTACATGATAGTTTTGAGTTGCTTTCCAAATCTTCACCTACCGTTTTTTATCTGCTAAGTACTGAGATTCGTTGTTGAATCGAAAACTTGTCTTGCAACTTGACATTCCCCTGTAATCGTAGGTTGGTGGTATGGCGTCGTTGGTCACTTGGGGGCGTGTGATGGGAGTGCAAACAACTGCCATTGTTGCTGTAATGGTAAGTGAAATTTTGCAAGATAACTACAAATTTATATTTGATTAGAACTCCTAGGATTTCTGAATGAGTAGTGAATGTAGTGTTTGATGATAAATCACTTTGCTGATGGTCTTGCTTCAGCACTTCACAAGTACTTAGTCTCAAATCATTTTAGATTACATTGGAACATGAGAATTTTGAGTGAAAAGTGCTTATTGGCCTGAACAATGTTGTGGAGTGAGACTGATATGTTGGTGATGGACAGACATGGTGATGTTGGAGTTCAGTCAGTACAGCATCGGGTCGCGGTGGAGAAAGACGGTGATAAACCGAAAGAGCCACAAGGAAGTAGGGAATGA

mRNA sequence

TTTTGATCAATTTTGGGGAGTTTTTCATTGTTTTCTCAATGAGGGTTTCCAATTAACTATTTCCCATGTCTCTTTAAGAAGTTTCATGATGTGTGGATGCCAATGGCAATGTATTATCAGCTCTGATGAAGCATTTAGTATTTCCCTGTTCTTGAAGTTGTTGCTGTATTGCTGTTTCTTAGTGATAGTAGCTTGTCGGTCGTGATGTCTACAACAATCACTTTCATGATAAAAAGTTGTCTTCTTCTCTCATGGGTCCTCCTTTCTTTCTTCAAATTCAAAAGCTAGTGATTCCAATAACTGTCTTCTATTACTTTGATTTTTATATAGGGGGTTTAATTCCCCAGTTTTCACTCCTTGGTTGCTCTATTTTTGTTTCATTTTCTGCAAGGATATCACAGAATACAATGTTTTATCTGCTCATCTCTTTCCTTTCCTTCATCCTTCTCTCTAAGTCCTTCTCTTACAAACGTCTGCTGCCATGGGAGGCCAAGATGAGCTTGTTGACTGCTTTACTTGTATCATGGTTCCACAAGAGCAGATTTGCTTTGAGTTTTTTTCAAGTTCTCAAGGTCTCTGATCCGCCATTAAAGAGCATCACATGTAGTACAAAACTGAGGAATTTAGAGGAGAAAAGGGAAACTTCACTCTTGGATTTACCCGAGTTGGTTCTGGAGTCGATTCTCGACCGGCTTTCGCCATTGGAGTTGTGTAAGATGGCAAATGTGTGTACTTATTTGAGGGATGTTTGTGAAGATGACTATTTCTGGGAGAAGCACATGAAGCGGAAATGGGGGAAGTTGATGGGTAATTCTGCTTGTAAGGAATGGCATTTGCATATAGCCCTTAAGAGGAGATCAGAGCTCTCAAGTCCATCTCAGAAGAAAGGTTTGTTCAGTTCATATTTTGGAAGTTGGTCTTTCCTGCTGATTAGACCAAAATCAGAAAGAAAAGGCAAGATCAGGAGCTCTTTACCAATTGATTCAATGAAGGCTTGGTATCAATCTCTTGAGAGTGGAAAGTTATGGTTCCCAGCTCAAGTCTACAATAGAGAGAGTGGTCATGCTGGTTTCATGTTGTCTTGTTATGATGCCCAAATATCCTACGATTCTCAGACCGACATGTTTAAGGCAAGATATCCACCACACGGGCGACGGGCGATAGAGGAAAATATTCTCTGGAATAGGCTAAGAGCACCGCCTGTTGATATTCCTCCCCATGTTCTTCATGTCTCTGAATGCTTAGCTGACTTGAAACCTGGTGATCATGTTGGTGGTATGGCGTCGTTGGTCACTTGGGGGCGTGTGATGGGAGTGCAAACAACTGCCATTGTTGCTGTAATGTCAGTACAGCATCGGGTCGCGGTGGAGAAAGACGGTGATAAACCGAAAGAGCCACAAGGAAGTAGGGAATGA

Coding sequence (CDS)

ATGGGTCCTCCTTTCTTTCTTCAAATTCAAAAGCTAGTGATTCCAATAACTGTCTTCTATTACTTTGATTTTTATATAGGGGGTTTAATTCCCCAGTTTTCACTCCTTGGTTGCTCTATTTTTGTTTCATTTTCTGCAAGGATATCACAGAATACAATGTTTTATCTGCTCATCTCTTTCCTTTCCTTCATCCTTCTCTCTAAGTCCTTCTCTTACAAACGTCTGCTGCCATGGGAGGCCAAGATGAGCTTGTTGACTGCTTTACTTGTATCATGGTTCCACAAGAGCAGATTTGCTTTGAGTTTTTTTCAAGTTCTCAAGGTCTCTGATCCGCCATTAAAGAGCATCACATGTAGTACAAAACTGAGGAATTTAGAGGAGAAAAGGGAAACTTCACTCTTGGATTTACCCGAGTTGGTTCTGGAGTCGATTCTCGACCGGCTTTCGCCATTGGAGTTGTGTAAGATGGCAAATGTGTGTACTTATTTGAGGGATGTTTGTGAAGATGACTATTTCTGGGAGAAGCACATGAAGCGGAAATGGGGGAAGTTGATGGGTAATTCTGCTTGTAAGGAATGGCATTTGCATATAGCCCTTAAGAGGAGATCAGAGCTCTCAAGTCCATCTCAGAAGAAAGGTTTGTTCAGTTCATATTTTGGAAGTTGGTCTTTCCTGCTGATTAGACCAAAATCAGAAAGAAAAGGCAAGATCAGGAGCTCTTTACCAATTGATTCAATGAAGGCTTGGTATCAATCTCTTGAGAGTGGAAAGTTATGGTTCCCAGCTCAAGTCTACAATAGAGAGAGTGGTCATGCTGGTTTCATGTTGTCTTGTTATGATGCCCAAATATCCTACGATTCTCAGACCGACATGTTTAAGGCAAGATATCCACCACACGGGCGACGGGCGATAGAGGAAAATATTCTCTGGAATAGGCTAAGAGCACCGCCTGTTGATATTCCTCCCCATGTTCTTCATGTCTCTGAATGCTTAGCTGACTTGAAACCTGGTGATCATGTTGGTGGTATGGCGTCGTTGGTCACTTGGGGGCGTGTGATGGGAGTGCAAACAACTGCCATTGTTGCTGTAATGTCAGTACAGCATCGGGTCGCGGTGGAGAAAGACGGTGATAAACCGAAAGAGCCACAAGGAAGTAGGGAATGA

Protein sequence

MGPPFFLQIQKLVIPITVFYYFDFYIGGLIPQFSLLGCSIFVSFSARISQNTMFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPPLKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYFWEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMFKARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHVGGMASLVTWGRVMGVQTTAIVAVMSVQHRVAVEKDGDKPKEPQGSRE

Homology

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BLAST of Lsi03G013300 vs. ExPASy Swiss-Prot
Match: Q8RY82 (F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.6e-62
Identity = 137/295 (46.44%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           + Y LI+ LSF   +KS S   L PW ++      LL  +F K+ F  +  Q     DP 
Sbjct: 2   LLYFLITCLSFFFFTKSLS---LPPWASETK---TLLSFYFIKNPFMNTLHQT--KHDPA 61

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
              I             + S+LDLPEL L+ ILD L P  LC MA VC+ LR+ C  D+ 
Sbjct: 62  SPVID------------QMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRERCVSDHL 121

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFS-----SYFGSWSFLLI 232
           WEKH+K KWGK++G +A +EW  +I+      L SP  + G        S   S S  + 
Sbjct: 122 WEKHLKTKWGKILGPAAHREWQCYIS-SSTYHLDSPHHQTGNLGFAKIISLIRSLS-SVF 181

Query: 233 RPKSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDS 292
           R   +R+G   SSLP+DS  + Y SLE+G+ WFPAQVYNRE+GH GFMLSCYDA++SYD+
Sbjct: 182 REDKQRRG-YASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDT 241

Query: 293 QTDMFKARYPPHGRR--AIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
            TD F+ARYPPHGRR  AIE+ + W+R+RA P+D  PH+LHVS+ L +LKPGDH+
Sbjct: 242 HTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKPGDHI 273

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BLAST of Lsi03G013300 vs. ExPASy Swiss-Prot
Match: Q6NLB1 (F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.1e-61
Identity = 135/293 (46.08%), Postives = 177/293 (60.41%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           + YLLI+ LSF   SKS S+ +   W +K      LL  +F K  F  S  Q+     P 
Sbjct: 2   LLYLLITCLSFFFFSKSLSFPQ---WASKTK---NLLSFYFSKYLFTNSLHQI----TPD 61

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           L S              + S+LDLP+L L+ IL+ L P ELC MA VC+ LR+ C  D+ 
Sbjct: 62  LASPVLG----------KMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHL 121

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKK---GLFSSYFGSWSFLLIRP 232
           WEKH+K KWGK++G SA KEW  +  L     L SP  K    GL        S   I  
Sbjct: 122 WEKHLKTKWGKILGPSAHKEWQCY--LSSPYHLDSPHHKTSHLGLAKIISLMRSLSSIFR 181

Query: 233 KSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQT 292
             + + +  SS+P+DS   +Y SLE+G+ WFPAQVYNRE+GH GFMLSCYDA++SYD+ T
Sbjct: 182 DDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDT 241

Query: 293 DMFKARYPPHGRRAI--EENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           + F+ARYPPHG+RAI  E+++ W R+RA PVD  PH L+VS+ L +LKPGDH+
Sbjct: 242 NTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHI 272

[Close]

BLAST of Lsi03G013300 vs. ExPASy Swiss-Prot
Match: Q6NKN8 (F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.1e-61
Identity = 116/226 (51.33%), Postives = 151/226 (66.81%), Query Frame = 0


Query: 121 KLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYFWEKHMKRK 180
           K +N E++ + SLLDLP+L L+ IL++LSP ELC M +VC+ LRD C  D+ WEKHM+ K
Sbjct: 47  KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETK 106

Query: 181 WGKLMGNSACKEWHLHIALKRR---SELSSPSQKKGLFSSYFGS----WSFLLIRPKSER 240
           WG+LMG++A +EW  H+A   R   S  SS  + K  +SS F +    +++L      E 
Sbjct: 107 WGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCEN 166

Query: 241 KGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMFK 300
           +G      PIDS+  WY +LE+GK WFPAQVYNRE+GH GFM+SCYDA+I YD +TD F+
Sbjct: 167 RGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQ 226

Query: 301 ARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDH 340
           ARY  HGRRA EE + W RLR    D     LHVS+CL  L+PGDH
Sbjct: 227 ARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDH 272

[Close]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL
Match: A0A0A0LD57 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G842010 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 1.0e-144
Identity = 255/288 (88.54%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           M YLLISFLSFILLSKSFSYKRLLPWE KMSLLTALLVSWFHKS+ ALSFF VLKVSDP 
Sbjct: 1   MLYLLISFLSFILLSKSFSYKRLLPWEVKMSLLTALLVSWFHKSKLALSFFLVLKVSDPS 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LKSI CSTKL NLEEKR TSLLDLPEL LESILDRLSP ELC+MANVCTYLRDVCEDDYF
Sbjct: 61  LKSIRCSTKLGNLEEKRGTSLLDLPELALESILDRLSPSELCRMANVCTYLRDVCEDDYF 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEKHMK+KWGKLMGNSA KEWHLHIA +RRS+L+S  QKKG FSSY GSWSFLL RPK E
Sbjct: 121 WEKHMKQKWGKLMGNSASKEWHLHIARQRRSKLTSSPQKKGFFSSYSGSWSFLLTRPKPE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            +G IRS LPIDSMKAWYQSLE+GKLWFPAQVYNRESGHAGFMLSCYDAQISYD QTDMF
Sbjct: 181 SRGNIRSPLPIDSMKAWYQSLENGKLWFPAQVYNRESGHAGFMLSCYDAQISYDWQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNRLRAPPVDIPPH+LH SECLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIFWNRLRAPPVDIPPHLLHASECLADLKPGDHV 288

[Close]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL
Match: A0A5D3D5D1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00580 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.5e-140
Identity = 248/288 (86.11%), Postives = 260/288 (90.28%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRLLPWEAKMS LTALLVSWFHKS+ ALSFF VLKVSDP 
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLLPWEAKMSFLTALLVSWFHKSKLALSFFLVLKVSDPS 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LKS  CS K  NLEE+R TSLLDLPEL LES+L RLSP ELC+MANVCTYLRDVCEDDYF
Sbjct: 61  LKSNRCSAKQGNLEEERRTSLLDLPELALESVLGRLSPSELCRMANVCTYLRDVCEDDYF 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEKHMK+KWGKLMGNSACKEWHLHIA +RRS+L++  QKKG FSSY GSWSFLL RPK E
Sbjct: 121 WEKHMKQKWGKLMGNSACKEWHLHIARQRRSKLTNSPQKKGFFSSYSGSWSFLLTRPKPE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            +G IRS    DSMKAWYQSLE+GKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SRGNIRSP---DSMKAWYQSLENGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNRLRAPPVDIPPH+LH SECLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIFWNRLRAPPVDIPPHLLHASECLADLKPGDHV 285

[Close]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL
Match: A0A1S3CP96 (F-box protein At2g26850-like OS=Cucumis melo OX=3656 GN=LOC103502697 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.5e-140
Identity = 248/288 (86.11%), Postives = 260/288 (90.28%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRLLPWEAKMS LTALLVSWFHKS+ ALSFF VLKVSDP 
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLLPWEAKMSFLTALLVSWFHKSKLALSFFLVLKVSDPS 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LKS  CS K  NLEE+R TSLLDLPEL LES+L RLSP ELC+MANVCTYLRDVCEDDYF
Sbjct: 61  LKSNRCSAKQGNLEEERRTSLLDLPELALESVLGRLSPSELCRMANVCTYLRDVCEDDYF 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEKHMK+KWGKLMGNSACKEWHLHIA +RRS+L++  QKKG FSSY GSWSFLL RPK E
Sbjct: 121 WEKHMKQKWGKLMGNSACKEWHLHIARQRRSKLTNSPQKKGFFSSYSGSWSFLLTRPKPE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            +G IRS    DSMKAWYQSLE+GKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SRGNIRSP---DSMKAWYQSLENGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNRLRAPPVDIPPH+LH SECLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIFWNRLRAPPVDIPPHLLHASECLADLKPGDHV 285

[Close]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL
Match: A0A6J1IU61 (F-box protein At2g26850-like OS=Cucurbita maxima OX=3661 GN=LOC111479952 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.2e-126
Identity = 225/288 (78.12%), Postives = 252/288 (87.50%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLL+SFLSFILLSKSFSYKRL PWEAKMSL +  L+SWFHK   ALSFFQ+  +SDPP
Sbjct: 1   MFYLLLSFLSFILLSKSFSYKRLPPWEAKMSLFSPFLLSWFHKGSLALSFFQLFNLSDPP 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LK    STKL + +EK+ TSLLDLP L LE+ILDRLSP +LCKMANVCT+LR+VCED++ 
Sbjct: 61  LK----STKLESSDEKKGTSLLDLPNLPLEAILDRLSPSDLCKMANVCTHLRNVCEDEFL 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEK M +KWG L+G+SACK+WHLHIA KRRS+LS+PSQ +GL SS FG +S   +RPKSE
Sbjct: 121 WEKRMNQKWGNLIGDSACKQWHLHIAHKRRSKLSTPSQNRGLLSSCFGGFS-KFMRPKSE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            KGKI+S LPIDS KAWYQSLESGKLWFPAQV+NRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SKGKIKSCLPIDSKKAWYQSLESGKLWFPAQVFNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNR+RAPPVD PPHVLHVS+CLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIAWNRVRAPPVDTPPHVLHVSDCLADLKPGDHV 283

[Close]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL
Match: A0A6J1ERD4 (F-box protein At2g26850-like OS=Cucurbita moschata OX=3662 GN=LOC111437004 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.2e-126
Identity = 225/288 (78.12%), Postives = 250/288 (86.81%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRL PWEAKMSL +  L++WFHK   +LSFFQ+  +SDPP
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLPPWEAKMSLFSPFLLTWFHKGSLSLSFFQLFTLSDPP 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LK    STKL + +EK+ TSLLDLP L LESILDRLSP +LCKMANVCT+LR+ CED+Y 
Sbjct: 61  LK----STKLESSDEKKGTSLLDLPNLALESILDRLSPSDLCKMANVCTHLRNACEDEYL 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEK M +KWG L+GNSACK+WH+HIA KRRS+LS+PSQ +GL SS FG  S   +RPKSE
Sbjct: 121 WEKRMNQKWGNLIGNSACKQWHMHIAHKRRSKLSTPSQNRGLLSSCFGGLS-KFMRPKSE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            KGKI+ SLPIDS KAWYQSLESGKLWFPAQV+NRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SKGKIKRSLPIDSKKAWYQSLESGKLWFPAQVFNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNR+RAPPVD PPHVLHVS+CLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIAWNRVRAPPVDTPPHVLHVSDCLADLKPGDHV 283

[Close]

BLAST of Lsi03G013300 vs. NCBI nr
Match: XP_038903122.1 (F-box protein At2g26850-like [Benincasa hispida])

HSP 1 Score: 538.1 bits (1385), Expect = 6.2e-149
Identity = 268/289 (92.73%), Postives = 275/289 (95.16%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALL+SWFHKSR AL+FFQVL VSDPP
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLLSWFHKSRLALNFFQVLWVSDPP 60

Query: 113 LKS-ITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDY 172
           L S ITCSTKL NLEE R  SLLDLP+L LESILDRLSP ELCKMANVCTYLRDVCEDDY
Sbjct: 61  LNSIITCSTKLGNLEEGRGISLLDLPKLALESILDRLSPSELCKMANVCTYLRDVCEDDY 120

Query: 173 FWEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKS 232
           FWEKHMK+KWG LMGNSA KEWHLHIALKRRSELSSPSQKKGLFSSYFGSWS LLIRPKS
Sbjct: 121 FWEKHMKQKWGNLMGNSAYKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWS-LLIRPKS 180

Query: 233 ERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDM 292
           E +GKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGF+LSCYDAQISYDSQT+M
Sbjct: 181 ESRGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFILSCYDAQISYDSQTNM 240

Query: 293 FKARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           FKARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV
Sbjct: 241 FKARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 288

[Close]

BLAST of Lsi03G013300 vs. NCBI nr
Match: XP_004141125.1 (F-box protein At2g26850 [Cucumis sativus] >KGN59728.1 hypothetical protein Csa_001584 [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 2.1e-144
Identity = 255/288 (88.54%), Postives = 264/288 (91.67%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           M YLLISFLSFILLSKSFSYKRLLPWE KMSLLTALLVSWFHKS+ ALSFF VLKVSDP 
Sbjct: 1   MLYLLISFLSFILLSKSFSYKRLLPWEVKMSLLTALLVSWFHKSKLALSFFLVLKVSDPS 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LKSI CSTKL NLEEKR TSLLDLPEL LESILDRLSP ELC+MANVCTYLRDVCEDDYF
Sbjct: 61  LKSIRCSTKLGNLEEKRGTSLLDLPELALESILDRLSPSELCRMANVCTYLRDVCEDDYF 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEKHMK+KWGKLMGNSA KEWHLHIA +RRS+L+S  QKKG FSSY GSWSFLL RPK E
Sbjct: 121 WEKHMKQKWGKLMGNSASKEWHLHIARQRRSKLTSSPQKKGFFSSYSGSWSFLLTRPKPE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            +G IRS LPIDSMKAWYQSLE+GKLWFPAQVYNRESGHAGFMLSCYDAQISYD QTDMF
Sbjct: 181 SRGNIRSPLPIDSMKAWYQSLENGKLWFPAQVYNRESGHAGFMLSCYDAQISYDWQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNRLRAPPVDIPPH+LH SECLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIFWNRLRAPPVDIPPHLLHASECLADLKPGDHV 288

[Close]

BLAST of Lsi03G013300 vs. NCBI nr
Match: XP_008464952.1 (PREDICTED: F-box protein At2g26850-like [Cucumis melo] >KAA0057207.1 F-box protein [Cucumis melo var. makuwa] >TYK18755.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 508.4 bits (1308), Expect = 5.3e-140
Identity = 248/288 (86.11%), Postives = 260/288 (90.28%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRLLPWEAKMS LTALLVSWFHKS+ ALSFF VLKVSDP 
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLLPWEAKMSFLTALLVSWFHKSKLALSFFLVLKVSDPS 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LKS  CS K  NLEE+R TSLLDLPEL LES+L RLSP ELC+MANVCTYLRDVCEDDYF
Sbjct: 61  LKSNRCSAKQGNLEEERRTSLLDLPELALESVLGRLSPSELCRMANVCTYLRDVCEDDYF 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEKHMK+KWGKLMGNSACKEWHLHIA +RRS+L++  QKKG FSSY GSWSFLL RPK E
Sbjct: 121 WEKHMKQKWGKLMGNSACKEWHLHIARQRRSKLTNSPQKKGFFSSYSGSWSFLLTRPKPE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            +G IRS    DSMKAWYQSLE+GKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SRGNIRSP---DSMKAWYQSLENGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNRLRAPPVDIPPH+LH SECLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIFWNRLRAPPVDIPPHLLHASECLADLKPGDHV 285

[Close]

BLAST of Lsi03G013300 vs. NCBI nr
Match: KAG7018144.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 476.1 bits (1224), Expect = 2.9e-130
Identity = 235/308 (76.30%), Postives = 259/308 (84.09%), Query Frame = 0


Query: 33  FSLLGCSIFVSFSARISQNTMFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSW 92
           FS   C  F SF ARISQ  MFYLLISFLSFILLSKSFSYKRL PWEAKMSL +  L++W
Sbjct: 19  FSFSICPFFASFCARISQTAMFYLLISFLSFILLSKSFSYKRLPPWEAKMSLFSPFLLTW 78

Query: 93  FHKSRFALSFFQVLKVSDPPLKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLE 152
           FHK   +LSFFQ+  +SDPPLK    STKL + +EK+ TSLLDLP L LESILDRLSP +
Sbjct: 79  FHKGSLSLSFFQLFTLSDPPLK----STKLESSDEKKGTSLLDLPNLALESILDRLSPSD 138

Query: 153 LCKMANVCTYLRDVCEDDYFWEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKK 212
           LCKMANVCT+LR+ CED+Y WEK M +KWG L+GNSACK+WHLHIA KRRS+LS+PSQ +
Sbjct: 139 LCKMANVCTHLRNACEDEYLWEKRMNQKWGNLIGNSACKQWHLHIAHKRRSKLSTPSQNR 198

Query: 213 GLFSSYFGSWSFLLIRPKSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHA 272
           GL SS FG  S   +RP SE KGKI+ SLPIDS KAWYQSLESGKLW PAQV+NRESGHA
Sbjct: 199 GLLSSCFGGLS-KFMRPTSEIKGKIKRSLPIDSKKAWYQSLESGKLWLPAQVFNRESGHA 258

Query: 273 GFMLSCYDAQISYDSQTDMFKARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLA 332
           GFMLSCYDAQISYDSQTDMFKARYPPHGRRAIEENI WNR+RAPPVD PPHVLHVS+CLA
Sbjct: 259 GFMLSCYDAQISYDSQTDMFKARYPPHGRRAIEENIAWNRVRAPPVDTPPHVLHVSDCLA 318

Query: 333 DLKPGDHV 341
           DLKPGDHV
Sbjct: 319 DLKPGDHV 321

[Close]

BLAST of Lsi03G013300 vs. NCBI nr
Match: XP_023526307.1 (F-box protein At2g26850-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.7 bits (1197), Expect = 3.9e-127
Identity = 228/288 (79.17%), Postives = 251/288 (87.15%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           MFYLLISFLSFILLSKSFSYKRL PWEAKMSL +  L+SWFHK   ALSFFQ+  +SDPP
Sbjct: 1   MFYLLISFLSFILLSKSFSYKRLPPWEAKMSLFSPFLLSWFHKGSHALSFFQLFTLSDPP 60

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           LK    STKL + +EK+ TSLLDLP L LESILDRLSP +LCKMANVCT+LR+ CED+Y 
Sbjct: 61  LK----STKLESSDEKKGTSLLDLPNLALESILDRLSPSDLCKMANVCTHLRNACEDEYL 120

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFSSYFGSWSFLLIRPKSE 232
           WEK M +KWGKL+G+SACK+WHLHIA KRRS+LS+PSQ +GL SS FG  S   +RPKSE
Sbjct: 121 WEKRMNQKWGKLIGDSACKQWHLHIAHKRRSKLSTPSQNRGLLSSCFGGLS-KFMRPKSE 180

Query: 233 RKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMF 292
            KGKI+ SLPIDS KAWYQSLESGKLWFPAQV+NRESGHAGFMLSCYDAQISYDSQTDMF
Sbjct: 181 SKGKIKRSLPIDSKKAWYQSLESGKLWFPAQVFNRESGHAGFMLSCYDAQISYDSQTDMF 240

Query: 293 KARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           KARYPPHGRRAIEENI WNR+RAPPVD PPHVLHVS+CLADLKPGDHV
Sbjct: 241 KARYPPHGRRAIEENIAWNRVRAPPVDTPPHVLHVSDCLADLKPGDHV 283

[Close]

BLAST of Lsi03G013300 vs. TAIR 10
Match: AT2G32560.1 (F-box family protein )

HSP 1 Score: 240.0 bits (611), Expect = 3.2e-63
Identity = 137/295 (46.44%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           + Y LI+ LSF   +KS S   L PW ++      LL  +F K+ F  +  Q     DP 
Sbjct: 2   LLYFLITCLSFFFFTKSLS---LPPWASETK---TLLSFYFIKNPFMNTLHQT--KHDPA 61

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
              I             + S+LDLPEL L+ ILD L P  LC MA VC+ LR+ C  D+ 
Sbjct: 62  SPVID------------QMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRERCVSDHL 121

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKKGLFS-----SYFGSWSFLLI 232
           WEKH+K KWGK++G +A +EW  +I+      L SP  + G        S   S S  + 
Sbjct: 122 WEKHLKTKWGKILGPAAHREWQCYIS-SSTYHLDSPHHQTGNLGFAKIISLIRSLS-SVF 181

Query: 233 RPKSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDS 292
           R   +R+G   SSLP+DS  + Y SLE+G+ WFPAQVYNRE+GH GFMLSCYDA++SYD+
Sbjct: 182 REDKQRRG-YASSLPLDSSMSCYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDT 241

Query: 293 QTDMFKARYPPHGRR--AIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
            TD F+ARYPPHGRR  AIE+ + W+R+RA P+D  PH+LHVS+ L +LKPGDH+
Sbjct: 242 HTDTFQARYPPHGRRASAIEKGVTWDRIRAAPIDASPHLLHVSDSLKELKPGDHI 273

[Close]

BLAST of Lsi03G013300 vs. TAIR 10
Match: AT2G26850.1 (F-box family protein )

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-62
Identity = 135/293 (46.08%), Postives = 177/293 (60.41%), Query Frame = 0


Query: 53  MFYLLISFLSFILLSKSFSYKRLLPWEAKMSLLTALLVSWFHKSRFALSFFQVLKVSDPP 112
           + YLLI+ LSF   SKS S+ +   W +K      LL  +F K  F  S  Q+     P 
Sbjct: 2   LLYLLITCLSFFFFSKSLSFPQ---WASKTK---NLLSFYFSKYLFTNSLHQI----TPD 61

Query: 113 LKSITCSTKLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYF 172
           L S              + S+LDLP+L L+ IL+ L P ELC MA VC+ LR+ C  D+ 
Sbjct: 62  LASPVLG----------KMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHL 121

Query: 173 WEKHMKRKWGKLMGNSACKEWHLHIALKRRSELSSPSQKK---GLFSSYFGSWSFLLIRP 232
           WEKH+K KWGK++G SA KEW  +  L     L SP  K    GL        S   I  
Sbjct: 122 WEKHLKTKWGKILGPSAHKEWQCY--LSSPYHLDSPHHKTSHLGLAKIISLMRSLSSIFR 181

Query: 233 KSERKGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQT 292
             + + +  SS+P+DS   +Y SLE+G+ WFPAQVYNRE+GH GFMLSCYDA++SYD+ T
Sbjct: 182 DDDHRRRYPSSIPLDSTMNFYLSLETGRFWFPAQVYNRENGHVGFMLSCYDAELSYDTDT 241

Query: 293 DMFKARYPPHGRRAI--EENILWNRLRAPPVDIPPHVLHVSECLADLKPGDHV 341
           + F+ARYPPHG+RAI  E+++ W R+RA PVD  PH L+VS+ L +LKPGDH+
Sbjct: 242 NTFQARYPPHGKRAIAVEKDVTWERIRAAPVDASPHNLYVSDSLNELKPGDHI 272

[Close]

BLAST of Lsi03G013300 vs. TAIR 10
Match: AT2G41170.1 (F-box family protein )

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-62
Identity = 116/226 (51.33%), Postives = 151/226 (66.81%), Query Frame = 0


Query: 121 KLRNLEEKRETSLLDLPELVLESILDRLSPLELCKMANVCTYLRDVCEDDYFWEKHMKRK 180
           K +N E++ + SLLDLP+L L+ IL++LSP ELC M +VC+ LRD C  D+ WEKHM+ K
Sbjct: 47  KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETK 106

Query: 181 WGKLMGNSACKEWHLHIALKRR---SELSSPSQKKGLFSSYFGS----WSFLLIRPKSER 240
           WG+LMG++A +EW  H+A   R   S  SS  + K  +SS F +    +++L      E 
Sbjct: 107 WGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCEN 166

Query: 241 KGKIRSSLPIDSMKAWYQSLESGKLWFPAQVYNRESGHAGFMLSCYDAQISYDSQTDMFK 300
           +G      PIDS+  WY +LE+GK WFPAQVYNRE+GH GFM+SCYDA+I YD +TD F+
Sbjct: 167 RGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQ 226

Query: 301 ARYPPHGRRAIEENILWNRLRAPPVDIPPHVLHVSECLADLKPGDH 340
           ARY  HGRRA EE + W RLR    D     LHVS+CL  L+PGDH
Sbjct: 227 ARYSAHGRRAAEEKVTWQRLRPSQDDTKSRDLHVSDCLHGLRPGDH 272

The following BLAST results are available for this feature:

BLAST of Lsi03G013300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY82	4.6e-62	46.44	F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1	[more]
Q6NLB1	5.1e-61	46.08	F-box protein At2g26850 OS=Arabidopsis thaliana OX=3702 GN=At2g26850 PE=2 SV=1	[more]
Q6NKN8	5.1e-61	51.33	F-box protein At2g41170 OS=Arabidopsis thaliana OX=3702 GN=At2g41170 PE=2 SV=1	[more]

BLAST of Lsi03G013300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD57	1.0e-144	88.54	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G842010 PE=4 ...	[more]
A0A5D3D5D1	2.5e-140	86.11	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00580 ...	[more]
A0A1S3CP96	2.5e-140	86.11	F-box protein At2g26850-like OS=Cucumis melo OX=3656 GN=LOC103502697 PE=4 SV=1	[more]
A0A6J1IU61	1.2e-126	78.13	F-box protein At2g26850-like OS=Cucurbita maxima OX=3661 GN=LOC111479952 PE=4 SV...	[more]
A0A6J1ERD4	1.2e-126	78.13	F-box protein At2g26850-like OS=Cucurbita moschata OX=3662 GN=LOC111437004 PE=4 ...	[more]

BLAST of Lsi03G013300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903122.1	6.2e-149	92.73	F-box protein At2g26850-like [Benincasa hispida]	[more]
XP_004141125.1	2.1e-144	88.54	F-box protein At2g26850 [Cucumis sativus] >KGN59728.1 hypothetical protein Csa_0...	[more]
XP_008464952.1	5.3e-140	86.11	PREDICTED: F-box protein At2g26850-like [Cucumis melo] >KAA0057207.1 F-box prote...	[more]
KAG7018144.1	2.9e-130	76.30	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023526307.1	3.9e-127	79.17	F-box protein At2g26850-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G013300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32560.1	3.2e-63	46.44	F-box family protein	[more]
AT2G26850.1	3.6e-62	46.08	F-box family protein	[more]
AT2G41170.1	3.6e-62	51.33	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 136..176 e-value: 2.1E-8 score: 43.9
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 132..176 e-value: 3.1E-9 score: 36.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 130..176 score: 13.816056
None	No IPR available	GENE3D	1.20.1280.50		coord: 119..210 e-value: 5.7E-10 score: 41.0
None	No IPR available	PANTHER	PTHR31482	ESTS AU081301(E20138)	coord: 53..340
None	No IPR available	PANTHER	PTHR31482:SF10	F-BOX-LIKE PROTEIN	coord: 53..340
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 128..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G013300.1	Lsi03G013300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding