Lsi03G012710 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G012710
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	SNARE associated Golgi protein family
Location	chr03: 23463588 .. 23467273 (+)
RNA-Seq Expression	Lsi03G012710
Synteny	Lsi03G012710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGGTCATGGTCCACAAACCAAGACAAGTGGGTCCACCGATCCGCAATCTCCACGGTGCATATTTCACATTTCCAATATACCGTATGAATCTGTTAGACGGTCGGTGGTAATCTCGGCGCCGGACGGTTTCAACCAGAATCAAATCTCGAGAGCTTGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCTGCTGTAGTGGCGGCGGTGGCGATTCTGAGAGAATTGGGGAAGCGATACGGATGGGAAATTGACAAAGAAGCGGCTCTTAAGGTGTTCAGCCAATGGTCTGATCGATTGGGGGTGTGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACGCTTGCTCTCTGTTTGCCTTACGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGTTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTTGATCTCAAATTTCCTGTTATCGTATGATTTTTTTGATTTGATTCTGAGTTTATGCAAGGATTATGATGTGTCATGATATGTAATCGTCTGCTCGTGGTATGGAATTTTCTTGCTGTAGTTTAAGATATGTTTGTTGATTGGGCAGTTTTGTTGTTCACATTTTGGGGGTTTTAATTGTATGTTGGATGCCTTGAAATGGATTATTTTGCCCTGAATCTGTACTTTATAGACAGAAGCTGGATTACGTCCTTAGTCTGTGTAGATAAGTGAAATTATAGAAGTTTTGTTGAATTTCTCCTGTTGGACATTGTTGTAAATCGGTGCTTACTATGTGTTGTACCCTTTTTGAAGATGTTTCAGTTAGTGTATAATGAAGGCAGATATTTTGTAATTGACGCTGGCTGTGAAGGAGTTAGGAAACTCAGGTGTAACGACTTAATAATTTTCAGATGTATGGGAACAGAAACAGAAACTATTCATTAATATAGTTTTTATGGGAATTGTAGACTGTATCAACCAAGAAAAGAGACAAAAGGGGAAATGAGAAATCCCCTTTAACCCCAATTGGCATAGACCATCAAGACGTTGGAGTTGGAAAGTTTTTTGGAGAAAGTGCACCAATTAGAGGAAAAGAATATAACTAGGTCCATCAAGTCTTGAAAAATATCATATCTTTAAACACCTTTTGATGATTTCTTTTAAACCACTACCTTCAAGGTAACACATGATAGCATTGTACCAAAGAATCTTTGCTTGATCTCTAAAGGGATGGGGATGACCATGAAGAAGTAAATTAGAGTTACCATCTTAGGGAAGTACCAACGAAGGTTAAATTGATTAAACAACTTCCCCCATCTTCTAGCTGGAAAGGAGCCATGAAATTATAGGTGATTTTGGACCGACCCTTGGGTAATAACCAGAGAACCCTTGTCCATGAGTTTCCCCCTGCTTTATAGATTAACTAGTTAGGAAACAACCACCGTGAAAGAGACTTAGAATGTTAATCGTAGCTTTTGGGATCTTAATCTTGTGAGGAATTTAAAACTCAAGGAGGCTATGGAATAGGCTGATCTCAGCATGGTCTTAGCACCGATCACCTTCTTTCAGCTAGATGATGCTTGGAAATGGCCTTTCAATTCTAGATGGACATGTCTCTTCTAAATCTCTCTTGGCTGAGATGGGTGATAGAATCAATATTTTGGAGACATCTTTGGCTAAAGGCATATGGATTTTGAATGCGAATACCCAAAGAAGATTAAGTTTTTCCTATGGGAATTGTCTCATAAGGCCATAAACACCAAAAATTCCCTTTAAAAAATAATGCCAAATTTGGTCTTATCTCCGAGGTGGTGTCCTTGCTGATTCCTAGAGATGTTACTACTCACTTGGCTCCATTCTCTCTGGTCACTCTTTCAAGGACATTTTTTTTTTTTTTTTTTGTGGCTTCATATTTGGGTTTTATTAATAGAAGGAAAGAAACCAAAGAGTCTTCATGGACAAGAATCATCCTTTCGATACACTCTTTGACCTTGTCATTTATTAAATTATTATGCTATTTCTTGGTGTAAAAGTTCAAATCTTTTTGCTTCGTATTCATCCCTACTAAACAATTGGGATAGCTTATTGTAATACTATGAATTGTACGTCCTTTTTGTGAATTTTACTCATCAATAAAATTGTTTCTTATATATATATAAATAAAAGGGAAATTTTAGCTGATTCTTGTCATCCGATGATCTCTTACAAAAGGTGCACAAACTTATGGACCAAGTATAGTTGGGAAACATTTTCTGCAATTTGTTTTGTTGCTAGTGTTCAACCAATCTTCGAATTTTAGATTTTGAAATAACCTTGTCCTACCGGCTACCAAGGACTTGTTTCATTTGAAAGAGTCGTTAAAAAACAGATTTACAGGTAGAGGCTCCACTGATCTTTAAAAAAACACCAGACTCCCTCCACTGATGAGCTTTCTGAGGCTAACATCCTTGAATGGATGCAAGTGAGCAGTGGCTTCTTTACCTGCAAACTGGTGTTCATATACAGCCCACCTTGACGGAAGAAAAGGCACTCACTTTCAACTTTAGCAGAAAACAAATAGTGACTTGTGACTCTTCATTTCTTTAGCCATCATCAATGAGCGGAAGAAACCATTTAGAATTGATCAAATGTAATTTGCAAATGGCATTTTATCCTGTGATGAAAAAACATCATTTTAAAAGTTAGTTTGACAAATAAATGGCTTTACGTTTTTCTAATTTACTTTATTTGTAAGTTGTTCCCCCATCTAGAAAAATGTCATCTTTCTGATACGGTCAACATGTTAATCTGGCGGGCTTTATTGGATTGTTTACTTGACATTTCAATATTATATTTTCTCTTGAAATGTTTGAAGAGTCTCATTGTTGGTTCTTATGAATTTCTATTCTCCATCCCTCTTCTCAATCTCAATCCAAGTTCATCTTTTGTTCAGGTTACTTTTTAGGAAGTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATATTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCCGCAACCAAAGTTGGGTTCTTTCTTGATTTTCTGCTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCAGTGCTGCGGTTGCTTCAGCGTCGGGCTCTCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCAAGCATTCTAATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAACAAAATGGCCGAAAGTTCCTCTAGTGTTGAAGGGAATGATAATGTTGACCCATCGAAAACCAAGGAGTTTAAGAAAAATCAATAATCTTTAGTAACTGACAGATAAGTTACTTGAAACTTTTAGATGATATACTTTCATTCATGATTTGTATACCCTGGACCAATGTCCATGACATGCTTAGTTTTTCTTTTCTTTTCTTAAGAAATTATTAGATTTATGGCATATTCTCGTCTTATGATTCGGGAGTCCCAGTTCACTTGCACTAATCCAAGCCTATTAACACATTAAAGCCTTCATTTGAATCACAAACTGATAGATGGCTATTCAGATGGAATATCGAAGGAGATGGGC

mRNA sequence

GTGGGGTCATGGTCCACAAACCAAGACAAGTGGGTCCACCGATCCGCAATCTCCACGGTGCATATTTCACATTTCCAATATACCGTATGAATCTGTTAGACGGTCGGTGGTAATCTCGGCGCCGGACGGTTTCAACCAGAATCAAATCTCGAGAGCTTGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCTGCTGTAGTGGCGGCGGTGGCGATTCTGAGAGAATTGGGGAAGCGATACGGATGGGAAATTGACAAAGAAGCGGCTCTTAAGGTGTTCAGCCAATGGTCTGATCGATTGGGGGTGTGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACGCTTGCTCTCTGTTTGCCTTACGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGTTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAGGAAGTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATATTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCCGCAACCAAAGTTGGGTTCTTTCTTGATTTTCTGCTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCAGTGCTGCGGTTGCTTCAGCGTCGGGCTCTCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCAAGCATTCTAATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAACAAAATGGCCGAAAGTTCCTCTAGTGTTGAAGGGAATGATAATGTTGACCCATCGAAAACCAAGGAGTTTAAGAAAAATCAATAATCTTTAGTAACTGACAGATAAGTTACTTGAAACTTTTAGATGATATACTTTCATTCATGATTTGTATACCCTGGACCAATGTCCATGACATGCTTAGTTTTTCTTTTCTTTTCTTAAGAAATTATTAGATTTATGGCATATTCTCGTCTTATGATTCGGGAGTCCCAGTTCACTTGCACTAATCCAAGCCTATTAACACATTAAAGCCTTCATTTGAATCACAAACTGATAGATGGCTATTCAGATGGAATATCGAAGGAGATGGGC

Coding sequence (CDS)

ATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCTGCTGTAGTGGCGGCGGTGGCGATTCTGAGAGAATTGGGGAAGCGATACGGATGGGAAATTGACAAAGAAGCGGCTCTTAAGGTGTTCAGCCAATGGTCTGATCGATTGGGGGTGTGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACGCTTGCTCTCTGTTTGCCTTACGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGTTTCTTCCCTGCCGTGATTTGTGTTTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAGGAAGTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATATTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCGATTCCCTCATACGTTATAAATTATGCTCTTGCCGCAACCAAAGTTGGGTTCTTTCTTGATTTTCTGCTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCAGTGCTGCGGTTGCTTCAGCGTCGGGCTCTCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCAAGCATTCTAATTTCCTGGAGGATTAAAAAGTACTCTAGTGGACTCAACAAAATGGCCGAAAGTTCCTCTAGTGTTGAAGGGAATGATAATGTTGACCCATCGAAAACCAAGGAGTTTAAGAAAAATCAATAA

Protein sequence

MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESSSSVEGNDNVDPSKTKEFKKNQ

Homology

[Close]

BLAST of Lsi03G012710 vs. ExPASy TrEMBL
Match: A0A1S3CN62 (uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.6e-130
Identity = 245/261 (93.87%), Postives = 248/261 (95.02%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           M   WGRWSKLAA+VAAVAILRELGKRYGWE D+EAALKVF+QWSDRLGVWAMPAYVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF  SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGS KSQIWSYIFPVLGIGSSILISWRIKKYSSGL KM  SS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGL-KMTGSS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SS EGNDNVDPSKTKEFKK Q
Sbjct: 241 SSDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of Lsi03G012710 vs. ExPASy TrEMBL
Match: A0A6J1F1R5 (uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC111441406 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130
Identity = 245/261 (93.87%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGWGRWSKLAAVVA VAILRELGK YGWEID+EAALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGL KMAESS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGL-KMAESS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SSVE +D+V+PSK KEFKK Q
Sbjct: 241 SSVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of Lsi03G012710 vs. ExPASy TrEMBL
Match: A0A0A0LFP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 242/261 (92.72%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGA WGRWSKLAA+VA VAILR+LGK YGWE D++AALKVF+QWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL K+A SS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL-KVAGSS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SS EGNDNVDPSKTKEFKK +
Sbjct: 241 SSDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of Lsi03G012710 vs. ExPASy TrEMBL
Match: A0A6J1DDR9 (uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020123 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 240/261 (91.95%), Postives = 249/261 (95.40%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGW RWSKLAA VA VAILRELGKRYGWEIDKEAA++V  QWSDRLG+WAMPAYVGIH
Sbjct: 1   MGAGWRRWSKLAAAVAVVAILRELGKRYGWEIDKEAAIEVVGQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFR S SAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSKSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCLPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL KMAESS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL-KMAESS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SSVEG+D+VD SKT++ KK +
Sbjct: 241 SSVEGSDSVDTSKTRDLKKTR 260

[Close]

BLAST of Lsi03G012710 vs. ExPASy TrEMBL
Match: A0A6J1J5V4 (uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 6.3e-127
Identity = 244/261 (93.49%), Postives = 246/261 (94.25%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGWGRWSKLAAVVA VAILRELGK YGWEID+EAALKVF  WSDRLGVWAMPAYVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGL KMAESS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGL-KMAESS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SSVE      PSKTKEFKK Q
Sbjct: 241 SSVE------PSKTKEFKKTQ 254

[Close]

BLAST of Lsi03G012710 vs. NCBI nr
Match: XP_038903022.1 (uncharacterized protein LOC120089724 [Benincasa hispida])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 251/261 (96.17%), Postives = 253/261 (96.93%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEA+LKVFSQWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEASLKVFSQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFP+LGIGSSILISWRIKKYSSGL KMAE S
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPILGIGSSILISWRIKKYSSGL-KMAE-S 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SSV GNDNVDPSK K  KK Q
Sbjct: 241 SSVAGNDNVDPSKIKNSKKTQ 259

[Close]

BLAST of Lsi03G012710 vs. NCBI nr
Match: XP_008465163.1 (PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 7.4e-130
Identity = 245/261 (93.87%), Postives = 248/261 (95.02%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           M   WGRWSKLAA+VAAVAILRELGKRYGWE D+EAALKVF+QWSDRLGVWAMPAYVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF  SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGS KSQIWSYIFPVLGIGSSILISWRIKKYSSGL KM  SS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGL-KMTGSS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SS EGNDNVDPSKTKEFKK Q
Sbjct: 241 SSDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of Lsi03G012710 vs. NCBI nr
Match: XP_022934149.1 (uncharacterized protein LOC111441406 [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 1.7e-129
Identity = 245/261 (93.87%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGWGRWSKLAAVVA VAILRELGK YGWEID+EAALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGL KMAESS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGL-KMAESS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SSVE +D+V+PSK KEFKK Q
Sbjct: 241 SSVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of Lsi03G012710 vs. NCBI nr
Match: XP_004141157.1 (uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical protein Csa_001292 [Cucumis sativus])

HSP 1 Score: 472.2 bits (1214), Expect = 2.8e-129
Identity = 242/261 (92.72%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGA WGRWSKLAA+VA VAILR+LGK YGWE D++AALKVF+QWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL K+A SS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGL-KVAGSS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           SS EGNDNVDPSKTKEFKK +
Sbjct: 241 SSDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of Lsi03G012710 vs. NCBI nr
Match: KAG6581638.1 (hypothetical protein SDJN03_21640, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018133.1 hypothetical protein SDJN02_20001 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470.7 bits (1210), Expect = 8.2e-129
Identity = 243/261 (93.10%), Postives = 250/261 (95.79%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIH 60
           MGAGWGRWSKLAAVVA VA+LRELGK YGWEID+EAALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAVLRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+ SSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESS 240
           ILQNTSIGSLA AAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGL KMAESS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGL-KMAESS 240

Query: 241 SSVEGNDNVDPSKTKEFKKNQ 262
           S VE +D+V+PSK KEFKK Q
Sbjct: 241 SCVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of Lsi03G012710 vs. TAIR 10
Match: AT1G44960.1 (SNARE associated Golgi protein family )

HSP 1 Score: 319.3 bits (817), Expect = 2.8e-87
Identity = 162/249 (65.06%), Postives = 200/249 (80.32%), Query Frame = 0


Query: 7   RWSKLAAVVAAVAIL-RELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIHTFTLA 66
           +W  +AA VA +AI+ R+   +YGW  +KEAAL+   +WSDRLG+WA+P YV +HT TLA
Sbjct: 3   KWLAIAATVAIIAIIVRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLA 62

Query: 67  LCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWAQRNKY 126
           LCLP+AVFFEA AS+LFGF PA++CVFSAKVL AS SFWIGR +F+ S+ A  WA  NKY
Sbjct: 63  LCLPHAVFFEAGASMLFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKY 122

Query: 127 FHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNT 186
           F++LSRGVE+DGWKFVLLARFSPIPSYVINYALAAT+V F  DFL PTVIGC+PMILQN 
Sbjct: 123 FNILSRGVERDGWKFVLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNA 182

Query: 187 SIGSLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLNKMAESSSSVEG 246
           S+GSLA  AVAS +G QKSQ+W Y+FPVLGI SS+LIS RIKKYS+G+ + +  +S+   
Sbjct: 183 SVGSLAGMAVASVAGKQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEASSDTSA--N 242

Query: 247 NDNVDPSKT 255
           N ++  S+T
Sbjct: 243 NSSLASSET 247

[Close]

BLAST of Lsi03G012710 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 60/246 (24.39%), Postives = 109/246 (44.31%), Query Frame = 0


Query: 11  LAAVVAAVAILRELGKRYGWEIDKEAALKVFSQW-SDRLGVWAMPAYVGIHTFTLALCLP 70
           L A+V+AV  L             E  LK F  W  + LG +  P  + +    L +   
Sbjct: 20  LVAIVSAVIFL-----------PVEQKLKDFLLWIKEDLGPFG-PLALALAYIPLTIVAV 79

Query: 71  YAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWAQRNKYFHLL 130
            A         LFG     +       LGA+ +F +GR + +  S      +    F  +
Sbjct: 80  PASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGK--SYVTSKIKHYPKFQAV 139

Query: 131 SRGVEQDGWKFVLLARFSPI-PSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIG 190
           S  +++ G+K VLL R  PI P  ++NY L+ T V    +++L T +G MP+      +G
Sbjct: 140 SVAIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLG-EYMLATWLGMMPITFALVYVG 199

Query: 191 SLASAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYS-SGLNK-MAESSSSVEGN 250
           +          G  +  ++ ++  ++G+  ++++   I + + S L+K +AE+ + ++G 
Sbjct: 200 TTLKDLSDITHGWHEVSVFRWVIMMVGVALAVILIICITRVAKSSLDKALAENGTELDGK 250

Query: 251 DNVDPS 253
            N D S
Sbjct: 260 KNDDAS 250

[Close]

BLAST of Lsi03G012710 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 45.4 bits (106), Expect = 7.9e-05
Identity = 47/190 (24.74%), Postives = 84/190 (44.21%), Query Frame = 0


Query: 11  LAAVVAAVAILRELGKRYGWEIDKEAALKVFSQWSDRLGVWAMPAYVGIHTFTLALCLPY 70
           LA V+    +    G  Y +       L  FS + +  G      ++ ++     L +P 
Sbjct: 111 LAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIP- 170

Query: 71  AVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRKSSSAMEWAQRNKYFHLLS 130
           A+    +A LLFG     I V  +  + AS++F I R   R+    ++  + NK F  + 
Sbjct: 171 ALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARE--RILKLVEDNKKFLAID 230

Query: 131 RGVEQDGWKFVLLARFSP-IPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGS 190
           + + ++G++ V L R SP +P  + NY    T V  F+ ++L + +G +P      S G+
Sbjct: 231 KAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVK-FVPYVLGSWLGMLPGSWAYVSAGA 290

Query: 191 LASAAVASAS 200
              A +   S
Sbjct: 291 FGRAIIQEES 296

The following BLAST results are available for this feature:

BLAST of Lsi03G012710 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G012710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CN62	3.6e-130	93.87	uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=...	[more]
A0A6J1F1R5	8.0e-130	93.87	uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A0A0LFP4	1.4e-129	92.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
A0A6J1DDR9	2.6e-128	91.95	uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1J5V4	6.3e-127	93.49	uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545...	[more]

BLAST of Lsi03G012710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903022.1	4.6e-132	96.17	uncharacterized protein LOC120089724 [Benincasa hispida]	[more]
XP_008465163.1	7.4e-130	93.87	PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo]	[more]
XP_022934149.1	1.7e-129	93.87	uncharacterized protein LOC111441406 [Cucurbita moschata]	[more]
XP_004141157.1	2.8e-129	92.72	uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical ...	[more]
KAG6581638.1	8.2e-129	93.10	hypothetical protein SDJN03_21640, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi03G012710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44960.1	2.8e-87	65.06	SNARE associated Golgi protein family	[more]
AT1G03260.1	1.2e-05	24.39	SNARE associated Golgi protein family	[more]
AT1G22850.1	7.9e-05	24.74	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 68..189 e-value: 3.2E-21 score: 76.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..261
None	No IPR available	PANTHER	PTHR47699	SNARE ASSOCIATED GOLGI PROTEIN FAMILY	coord: 6..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G012710.1	Lsi03G012710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane