Lsi03G011660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G011660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LysM domain-containing protein
Location	chr03: 22027202 .. 22031087 (+)
RNA-Seq Expression	Lsi03G011660
Synteny	Lsi03G011660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTCTTTGATTTTGTTGAGTCGATTTGGATCGATTTTTCAATTTTGGTTGACTCGATGATGATTATGATTTCTTGACGGAAATTGATTTTGATGGTGGATTTGAGAGGCGCAGATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGTTGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGACACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTAAACCACATTTCAGAATTTTGAATGAGTTTATAGTATAAAGAGGTTTTGAATTTGCATTAGGCTGTAATGTTCTCATATTTCTTTCAGTCGACTTTATGATGGGAAAACAATGAAATGATGATTTCAAAATGTTTTTGCTTTATATTGTTGTTATATTGGCGTGTCAGATGTTACTTTTTTTCCTCTTTTTATTTTTAATTTTTTTTATAATGAATCTATGATTCATACCGACAAAGCTAGAATTACTCTCTTTCCTCTTTGGCCTGGCATGATTTCTAAAGTTCCCAGATCGATGACAACTCATTCAAGTTGAATTTTCTGCAATAACCAAATGAGGCTTACGACAACTTTATATTGAAAATTGAATGAACCAGAACCTTTTTCCTTTACCCCCCTCCTGAGATAATCATTAGACTAGCATGGATTATGTACAGATGTTCATCAGATCTTCTTTCCTGTTTTCCAACTTAATATGACATTTTCGAAGTATGACTATCCAGGTAAGAAGGGGCAGAGCCGGAGTTTAAATTAAGGAAAATATCAATTTATACCTAAAAGTTTGGGATTGTATCACTAAGAATTATATCAATTTATATCATTTGGGTAAAGTTACCTTTGAAAGTGGTCCATTAGAATTGGTCCATGCATCTATTCTAATAGTCCATTTTGTTAATCATACCTTAGAATAAAAGTCTACTCATGTCTACGAATTGATGCGTTGATGATTTTCAAAAGTAATTTTAATAAAATGTCTAAATTGATTCACCGTGATAATTTAAGAGTTTAATTGAAATAATTATATGTTTGACACGAAGCTTGACGGAGGGTCGAGGGTATAAACTAATACGTTTATGAAAGTTTAAGGTTTACATTGATATTAGTTAAGGGTTTTAATTGATACAATTTCCAAAGTCTAGAGTATAAATTGATATTTTCCCCAAAAGTTAACCCGGCCTAAAATCAATAATAATTTTATAGGAAAATCATGATATTTATTGAAAAAAATAGAAATCAAAGGATCAAAGGGTCAAAGTTTTTATTTCTCAGTTATTCTTGTTTAATGAGAGTTAAAGAATACTAATATGGGTTTCCCACCCTCTATACTTGGCTTCTCCACTGAAATAGTAAGAGTTTGCTTGTGGTAATCATATAGTAGAAAATTTCACTCCAAAATCTGAAAATTTCTTTCATCTACCATCGATACTATTTTGTGATATTATTTGTTATTGGGTTATTTTAATGAAAATTCGATTTCTTTTCAAACAAAAAGATTGTGATGTGGTCATAAATTATCACTGTCTTCAAGTATAATTTTTTGCAATAAAATGAGTCTCTTATAGGTGGAAACTGTAATAATTGTTTATGGTGATTCGCCAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGGTATGTGTTTGCTATTTTGATATCTTTCATACTGTTTTCACATATTATTGCATAAGAGTGATTTGAATTGACTCGTTGAGCTGTGTTCAACGCCGTGTTTGAGTTTGGTATTGACTTGCAGAATAGTTATTGGCCATATAGGGCTTGAGGTTAAGGTTGGGGTTCAAATAGTATTTCTATCTGGAAAACTGTGCTTGGAGTGGCCTAAGGGAAGCCATGAAGAAAGTAAATAACATACCAGTGGAGCCAGGGCCATTATTTTATGCTTGGCGCCTTAGGTCTTTAATGGTTCTTTTTCTGATAGAGGTCATAAGTTGGAATAGTGTATACTGAATAGTTCTTTTGCTGTAGGAATTGTTGGTGATCGTTGAACAGTGGCACTGATTGTGATTTGTGAGTGTGGATGCTCAGGTGGTTGGTTTATTATGCAAAATTTAATGTTAACTAACTACATGTTGAACATATAAAGAAATTTAAAAGGTTACAATTGTTATGAATAATCTACCTGGAGTCTCATTCATGGCACATCCATCATAAATATAATACCACCAAGAACCTATCTATCTTGCTTGAAACCCATACAGATGTTAGTGTTTAAAAATAGTTCACCATTGTTGATTTAATTCGCAAAAAATTTGCTTATAATTCTTTATTCCCAAGTGTGTAAACTTCCACATTGAAATTCATCCCAAGTGATGTATTTAATACACTATGTTCGTTACAATACAATAAGAAATGGATGATTATAAATTTTTCACCCAGTATGTTGTGTTGATAAGAGGATCCTTTTGCAGACAGAGCAGCTCCGAAAAGACTCCAAGTCAACGTCTTTCGTCGGAATTCTTTGAATCTTTCCAGTCCCTCAAATTGAAGTCTTCCGATCAAAAGGTGTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGGCTCAAACCATCTGATCAGAACAGCAGAATTGACGGTTTTGACATGGCAGTGTACAGAAAAGGAGCCTCCCATTATTTAGAAGACGCGCACGTTTCTGGGACCCCACAGCATTCGGATTTACTAACACATCACCATCGAAAATCCAAGAGTTTAGTGAATGGATTTTTGGGTGAGAAAGGAGAGGTGGGTGATCTGCAATCTGCTGAAGCCGGGGATGGAGATCCCAAATGGAGCGATAAATTGATCAGAAGGCGCCAGAAATCAGTAGCTGACTTTTCGCATTCGCCTGAAACGCTTTTGAAAGATGACAACAGCAATGGTGGTAGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCGTCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAGCTCCATCTGAATTTAAAAAGAAAAAAGAAAGAAGGGGATAAATTTTCTACCAACTTTTGATCCGTAATTTATCAGAGGTTTTAATATGCCGTCTTTTATAGTTTACGAAAGAATACAAACTATAGAAGAAATTTAAAAAGTCAAATAACAGGTTCATTTCGGTTTTGAATTATTGGTTTCTTAAAGATAGGAGTACACAAAACAACAGGGAATTGATGGAAGAGCGCGTGCCATCACGTGCTCACTGGAATTTCAGTCTTGCGAGAGAGAATTGTATGCATTCTATTATTTTGTAGAAATGTATATTAGTTAATATAGGTCAACTCAGTTGAAACTTTGAAAGGAAAACGATTTTTTTTAATAGCGTGATGGTGTTCAGTTTAATGTATATTATTAGTTAATATATTTTGCTATTCCCCTTTTCTTTTGTTGAAGATTATTATAATACCACTTTAGATCAAAATGACTACTTTATTTA

mRNA sequence

GTGGTCTTTGATTTTGTTGAGTCGATTTGGATCGATTTTTCAATTTTGGTTGACTCGATGATGATTATGATTTCTTGACGGAAATTGATTTTGATGGTGGATTTGAGAGGCGCAGATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGTTGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGACACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGACAGAGCAGCTCCGAAAAGACTCCAAGTCAACGTCTTTCGTCGGAATTCTTTGAATCTTTCCAGTCCCTCAAATTGAAGTCTTCCGATCAAAAGGTGTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGGCTCAAACCATCTGATCAGAACAGCAGAATTGACGGTTTTGACATGGCAGTGTACAGAAAAGGAGCCTCCCATTATTTAGAAGACGCGCACGTTTCTGGGACCCCACAGCATTCGGATTTACTAACACATCACCATCGAAAATCCAAGAGTTTAGTGAATGGATTTTTGGGTGAGAAAGGAGAGGTGGGTGATCTGCAATCTGCTGAAGCCGGGGATGGAGATCCCAAATGGAGCGATAAATTGATCAGAAGGCGCCAGAAATCAGTAGCTGACTTTTCGCATTCGCCTGAAACGCTTTTGAAAGATGACAACAGCAATGGTGGTAGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCGTCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAGCTCCATCTGAATTTAAAAAGAAAAAAGAAAGAAGGGGATAAATTTTCTACCAACTTTTGATCCGTAATTTATCAGAGGTTTTAATATGCCGTCTTTTATAGTTTACGAAAGAATACAAACTATAGAAGAAATTTAAAAAGTCAAATAACAGGTTCATTTCGGTTTTGAATTATTGGTTTCTTAAAGATAGGAGTACACAAAACAACAGGGAATTGATGGAAGAGCGCGTGCCATCACGTGCTCACTGGAATTTCAGTCTTGCGAGAGAGAATTGTATGCATTCTATTATTTTGTAGAAATGTATATTAGTTAATATAGGTCAACTCAGTTGAAACTTTGAAAGGAAAACGATTTTTTTTAATAGCGTGATGGTGTTCAGTTTAATGTATATTATTAGTTAATATATTTTGCTATTCCCCTTTTCTTTTGTTGAAGATTATTATAATACCACTTTAGATCAAAATGACTACTTTATTTA

Coding sequence (CDS)

ATGGAAAGGGGGCGGATGAACGGAAATGGGAATTGTGATTATAGTTATGAGAGCAATGGATATCATTCATTAGATCTAGTGGTTGTCTACGGAGACAACACGCCTGATGGAAGAAGCTCTGGGAAGACGTCGCAGGTTGCATCTCCTTCGAATTGCATCGTTCATCCGGTTTCTAAATTAGACACTCTTGCTGGAGTTGCAATCAAGTATGGTGTTGAGGTCGCAGATATAAAGAAGATGAATGGGCTAGTTACAGACTTTCAAATGTTTGCTCTTAAATCTCTTCAGATTCCTCTTCCTGGAAGGCATCCTCCATCTCCTTGTCTATTAGAATGTCTAAACACTCCAGGACAGAGCAGCTCCGAAAAGACTCCAAGTCAACGTCTTTCGTCGGAATTCTTTGAATCTTTCCAGTCCCTCAAATTGAAGTCTTCCGATCAAAAGGTGTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGGCTCAAACCATCTGATCAGAACAGCAGAATTGACGGTTTTGACATGGCAGTGTACAGAAAAGGAGCCTCCCATTATTTAGAAGACGCGCACGTTTCTGGGACCCCACAGCATTCGGATTTACTAACACATCACCATCGAAAATCCAAGAGTTTAGTGAATGGATTTTTGGGTGAGAAAGGAGAGGTGGGTGATCTGCAATCTGCTGAAGCCGGGGATGGAGATCCCAAATGGAGCGATAAATTGATCAGAAGGCGCCAGAAATCAGTAGCTGACTTTTCGCATTCGCCTGAAACGCTTTTGAAAGATGACAACAGCAATGGTGGTAGTAACGGCTTCTCATCCTCTGCTGGAAAAGGCTTATTGGCTCAAAGACCCAAAACTTCTAGTAGAGCGAATTTGGTAAGTGACAATGAAGTCGGATTGATTCCAATTCCGATTGGTCTGGGGGATTCGTTCGTGGCTGCTGATGGATTTGCTGCGTTCAGGAAGTCGTCGAGTACATCGAGTTTGCCAGATCAAGAAAATGGCATCACTTCATCAATCTGGTCTCAGGCAATTTCAACTGCTTCGAGACCAATATTTGATGGGTTGCCAAAACCTTTAACAGGTCGAAGAAACAAAGCTGCACTTGATTAG

Protein sequence

MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQSSSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVYRKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWSDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDNEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLPKPLTGRRNKAALD

Homology

[Close]

BLAST of Lsi03G011660 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 38  RSSGKTSQVASP--SNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSL 97
           RS G T+ VA+P     I H +S  DTL G+A+KYGV +  IK+ N L +   +F  KSL
Sbjct: 44  RSYGSTASVAAPLSERYIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSL 103

Query: 98  QIPL 100
            IP+
Sbjct: 104 NIPV 107

[Close]

BLAST of Lsi03G011660 vs. ExPASy Swiss-Prot
Match: Q8IV50 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LYSMD2 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 38  RSSGKTSQVASPSNC------IVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFA 97
           RS G T+ V +P         + H V   DTL G+A+KYGV +  IK+ N L T+  +F 
Sbjct: 50  RSYGSTASVRAPLGAGVIERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFL 109

Query: 98  LKSLQIPLPGRHPPSPCLLECLNTPGQSSSEKTPSQ 128
            K+L IP+    P     L  +++P   +++ + SQ
Sbjct: 110 KKTLNIPVISEKPLLFNGLNSIDSPENETADNSFSQ 145

[Close]

BLAST of Lsi03G011660 vs. ExPASy Swiss-Prot
Match: Q9D7V2 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Lysmd2 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.2e-04
Identity = 35/101 (34.65%), Postives = 47/101 (46.53%), Query Frame = 0


Query: 38  RSSGKTSQVASPSNC------IVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFA 97
           RS G T+ V +P         + H V   DTL G+A+KYGV +  IK+ N L T+  +F 
Sbjct: 50  RSYGSTASVRAPLGARVIERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFL 109

Query: 98  LKSLQIPLPGRHPPSPCLLECLNTPGQSSSEKTPSQRLSSE 133
            K+L IP+       P L   LN+     SE   S     E
Sbjct: 110 KKTLSIPILSE---KPLLFNGLNSIDSPESETVDSSFCQEE 147

[Close]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL
Match: A0A5D3BYK1 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00160 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 6.0e-179
Identity = 332/373 (89.01%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQV-ASPSNCIVHPVSK 60
           MERGRMNGNGNCDYS ESNGYHSLDLV VYG+NTPDGRSSGKTSQV +S SNCIVHPVSK
Sbjct: 1   MERGRMNGNGNCDYSCESNGYHSLDLVDVYGENTPDGRSSGKTSQVSSSSSNCIVHPVSK 60

Query: 61  LDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQS 120
            DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNTPGQS
Sbjct: 61  FDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTPGQS 120

Query: 121 SSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVY 180
           SSE TPS RLSSEFFESFQSLKLKSS Q+VSPAMSSLQGYYGLKPSDQ +R  G +MA+Y
Sbjct: 121 SSETTPS-RLSSEFFESFQSLKLKSSHQRVSPAMSSLQGYYGLKPSDQKNRTVGLEMALY 180

Query: 181 RKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWS 240
           RKGASHYLED  VSGT  H DLLTHHH+KSKSLVNG LGEKGEV DLQS EAGDGD K S
Sbjct: 181 RKGASHYLEDVPVSGTSHHLDLLTHHHKKSKSLVNGCLGEKGEVSDLQSIEAGDGDSKLS 240

Query: 241 DKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDNE 300
           DKLIRRRQKSVADFS+SPE LL+D+NS+GGSNGFSSS GKGLLAQRPKTSSR NL SDNE
Sbjct: 241 DKLIRRRQKSVADFSNSPELLLRDENSSGGSNGFSSSGGKGLLAQRPKTSSRTNLASDNE 300

Query: 301 VGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLP 360
            GLIPIPIGLGDSF AADGFAAFRKSSSTSSLPDQENGITSSIWSQAI+TASRPIFDGLP
Sbjct: 301 GGLIPIPIGLGDSFAAADGFAAFRKSSSTSSLPDQENGITSSIWSQAITTASRPIFDGLP 360

Query: 361 KPLTGRRNKAALD 373
           KPLTGRRNKAALD
Sbjct: 361 KPLTGRRNKAALD 372

[Close]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL
Match: A0A1S3CG46 (uncharacterized protein LOC103500354 OS=Cucumis melo OX=3656 GN=LOC103500354 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 6.0e-179
Identity = 332/373 (89.01%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQV-ASPSNCIVHPVSK 60
           MERGRMNGNGNCDYS ESNGYHSLDLV VYG+NTPDGRSSGKTSQV +S SNCIVHPVSK
Sbjct: 1   MERGRMNGNGNCDYSCESNGYHSLDLVDVYGENTPDGRSSGKTSQVSSSSSNCIVHPVSK 60

Query: 61  LDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQS 120
            DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNTPGQS
Sbjct: 61  FDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTPGQS 120

Query: 121 SSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVY 180
           SSE TPS RLSSEFFESFQSLKLKSS Q+VSPAMSSLQGYYGLKPSDQ +R  G +MA+Y
Sbjct: 121 SSETTPS-RLSSEFFESFQSLKLKSSHQRVSPAMSSLQGYYGLKPSDQKNRTVGLEMALY 180

Query: 181 RKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWS 240
           RKGASHYLED  VSGT  H DLLTHHH+KSKSLVNG LGEKGEV DLQS EAGDGD K S
Sbjct: 181 RKGASHYLEDVPVSGTSHHLDLLTHHHKKSKSLVNGCLGEKGEVSDLQSIEAGDGDSKLS 240

Query: 241 DKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDNE 300
           DKLIRRRQKSVADFS+SPE LL+D+NS+GGSNGFSSS GKGLLAQRPKTSSR NL SDNE
Sbjct: 241 DKLIRRRQKSVADFSNSPELLLRDENSSGGSNGFSSSGGKGLLAQRPKTSSRTNLASDNE 300

Query: 301 VGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLP 360
            GLIPIPIGLGDSF AADGFAAFRKSSSTSSLPDQENGITSSIWSQAI+TASRPIFDGLP
Sbjct: 301 GGLIPIPIGLGDSFAAADGFAAFRKSSSTSSLPDQENGITSSIWSQAITTASRPIFDGLP 360

Query: 361 KPLTGRRNKAALD 373
           KPLTGRRNKAALD
Sbjct: 361 KPLTGRRNKAALD 372

[Close]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL
Match: A0A0A0LCX1 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G653440 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 5.0e-178
Identity = 332/374 (88.77%), Postives = 347/374 (92.78%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVSKL 60
           MERGRMNGNGNCDYS ESNGYHSLDL  VYG+NTPDGRSSGKTSQV+S SNCIVHPVSK 
Sbjct: 1   MERGRMNGNGNCDYSCESNGYHSLDLADVYGENTPDGRSSGKTSQVSSSSNCIVHPVSKF 60

Query: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQSS 120
           DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQSS
Sbjct: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTAGQSS 120

Query: 121 SEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVYR 180
           +E++P+ RLSSEFFESFQSLKLKSSDQ+VSPAMSSLQGYYGLKPSDQ SR DG +MAVY 
Sbjct: 121 AERSPN-RLSSEFFESFQSLKLKSSDQRVSPAMSSLQGYYGLKPSDQRSRTDGLEMAVYM 180

Query: 181 KGASHYLEDAHVSGTPQHSD-LLTHHHRKSKSLVNGFLGEKGEVG-DLQSAEAGDGDPKW 240
           KGASHYLED  V GT QH D LLTHHHRKSKSLVNG LGEKGEV  D+QS EAGDGD K 
Sbjct: 181 KGASHYLEDVPVYGTSQHLDFLLTHHHRKSKSLVNGCLGEKGEVSDDVQSIEAGDGDNKL 240

Query: 241 SDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDN 300
           SDKLIRRRQKSVADFS+SPE LLKD+NS+ GSNGFSSSAGKGLLAQRPK+SSRANL +DN
Sbjct: 241 SDKLIRRRQKSVADFSNSPEMLLKDENSSSGSNGFSSSAGKGLLAQRPKSSSRANLANDN 300

Query: 301 EVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL 360
           EVGLIPIPIGLGDSFV+ADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL
Sbjct: 301 EVGLIPIPIGLGDSFVSADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL 360

Query: 361 PKPLTGRRNKAALD 373
           PKPLTGRRNKAALD
Sbjct: 361 PKPLTGRRNKAALD 373

[Close]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL
Match: A0A6J1J3A0 (uncharacterized protein LOC111481449 OS=Cucurbita maxima OX=3661 GN=LOC111481449 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.5e-169
Identity = 325/385 (84.42%), Postives = 342/385 (88.83%), Query Frame = 0


Query: 1   MERGRMNGNGN--CDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVS 60
           MERGRMNGNGN   DYSYESNGYH+LDLV VYG+NTP GRSSGKTSQVAS SNCIVHPVS
Sbjct: 1   MERGRMNGNGNGDFDYSYESNGYHALDLVDVYGENTPIGRSSGKTSQVASSSNCIVHPVS 60

Query: 61  KLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQ 120
           K DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQ
Sbjct: 61  KFDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTSGQ 120

Query: 121 SSSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRID-GFDMA 180
           SSSEKTPS RLSSEFFESFQSLKLKSS+Q+VSPAMSSLQGYYGLKP DQ S+ID G++MA
Sbjct: 121 SSSEKTPS-RLSSEFFESFQSLKLKSSEQRVSPAMSSLQGYYGLKPLDQKSKIDGGYEMA 180

Query: 181 VYRKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPK 240
           VY KG SHYLED  VSGTP   DLLTHHHRK+KSLVNGF+GEKG++ DLQS EAGDGDPK
Sbjct: 181 VYGKGGSHYLEDVPVSGTP---DLLTHHHRKTKSLVNGFMGEKGDLTDLQSVEAGDGDPK 240

Query: 241 WSDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSD 300
           W+DKLIRRR KSVADFSH+PE LLKDDNS+GGSNGFSS+AGKG LAQRPKTSSR NL SD
Sbjct: 241 WNDKLIRRRLKSVADFSHTPEMLLKDDNSSGGSNGFSSNAGKG-LAQRPKTSSRTNLASD 300

Query: 301 NEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWS----------QAI 360
           N++GLIPIPIGLGD FVAADG   FRKSSSTSSLPDQENGITSSIWS          QAI
Sbjct: 301 NDIGLIPIPIGLGDLFVAADG---FRKSSSTSSLPDQENGITSSIWSASKWSLKPDLQAI 360

Query: 361 STASRPIFDGLPKPLTGRRNKAALD 373
           ST SRPIFDGLP PLTGRRNKAALD
Sbjct: 361 STVSRPIFDGLPIPLTGRRNKAALD 377

[Close]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL
Match: A0A6J1F865 (uncharacterized protein LOC111441757 OS=Cucurbita moschata OX=3662 GN=LOC111441757 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.7e-168
Identity = 323/385 (83.90%), Postives = 339/385 (88.05%), Query Frame = 0


Query: 1   MERGRMNGNGN--CDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVS 60
           MERGRMNGNGN   DYSYESNGYH+LDLV VYG+NTP GR  GKTSQVAS SNCIVHPVS
Sbjct: 1   MERGRMNGNGNGDFDYSYESNGYHALDLVDVYGENTPIGRGRGKTSQVASSSNCIVHPVS 60

Query: 61  KLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQ 120
           K DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQ
Sbjct: 61  KFDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTSGQ 120

Query: 121 SSSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRID-GFDMA 180
           SSSEKTPS RLSSEFFESFQSLKLK S+Q+VSPAMSSLQGYYGLKP DQ S+ID G++MA
Sbjct: 121 SSSEKTPS-RLSSEFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKPLDQKSKIDGGYEMA 180

Query: 181 VYRKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPK 240
           VY KG SHYLED  VSGTP   DLLTHHHRK+KSLVNGFLGEKG++ DLQS EAGDGDPK
Sbjct: 181 VYGKGGSHYLEDVPVSGTP---DLLTHHHRKTKSLVNGFLGEKGDLTDLQSVEAGDGDPK 240

Query: 241 WSDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSD 300
           W+DKLIRRR KSVADFSH+PE LLKDDNS+GGSNGFSS+AGKG LAQRPKTSSR NL SD
Sbjct: 241 WNDKLIRRRLKSVADFSHTPEMLLKDDNSSGGSNGFSSNAGKG-LAQRPKTSSRTNLASD 300

Query: 301 NEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWS----------QAI 360
           N++GLIPIPIGLGDSFVAADG   FRKSSSTSSLPDQENGI SSIWS          QAI
Sbjct: 301 NDIGLIPIPIGLGDSFVAADG---FRKSSSTSSLPDQENGIASSIWSASKWSLKPDLQAI 360

Query: 361 STASRPIFDGLPKPLTGRRNKAALD 373
           ST SRPIFDGLP PLTGRRNKAALD
Sbjct: 361 STVSRPIFDGLPIPLTGRRNKAALD 377

[Close]

BLAST of Lsi03G011660 vs. NCBI nr
Match: XP_038906142.1 (uncharacterized protein LOC120092022 [Benincasa hispida])

HSP 1 Score: 681.8 bits (1758), Expect = 3.3e-192
Identity = 350/372 (94.09%), Postives = 355/372 (95.43%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVSKL 60
           MERGRMNGNGNCDYSYESNGYHSLDLV VYGD+T D RSSGKTSQVAS SNCIVHPVSKL
Sbjct: 1   MERGRMNGNGNCDYSYESNGYHSLDLVDVYGDSTLDRRSSGKTSQVASSSNCIVHPVSKL 60

Query: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQSS 120
           DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNTPGQSS
Sbjct: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTPGQSS 120

Query: 121 SEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVYR 180
           SEKTPSQ LSSEFFESFQSLKLKSSDQ+VSPAMSSLQGYYGLKPSDQ SRIDGF+MAVYR
Sbjct: 121 SEKTPSQLLSSEFFESFQSLKLKSSDQRVSPAMSSLQGYYGLKPSDQKSRIDGFEMAVYR 180

Query: 181 KGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWSD 240
            G SHYLED  VSGTPQHSDLLTHHHRKSKSLVNGFLGEKGE GD QSAEAGDGDPKWSD
Sbjct: 181 SGVSHYLEDEPVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGESGDPQSAEAGDGDPKWSD 240

Query: 241 KLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDNEV 300
           KLIRRRQKSVADFS+SPE LLKDDNS+GGSNGFSSSAGKGLLAQRPKTSSR NL SDNEV
Sbjct: 241 KLIRRRQKSVADFSNSPEMLLKDDNSSGGSNGFSSSAGKGLLAQRPKTSSRTNLASDNEV 300

Query: 301 GLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLPK 360
           GLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDG PK
Sbjct: 301 GLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGFPK 360

Query: 361 PLTGRRNKAALD 373
           PLTGRRNKAALD
Sbjct: 361 PLTGRRNKAALD 372

[Close]

BLAST of Lsi03G011660 vs. NCBI nr
Match: XP_008461847.1 (PREDICTED: uncharacterized protein LOC103500354 [Cucumis melo] >KAA0052766.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK04190.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 636.7 bits (1641), Expect = 1.2e-178
Identity = 332/373 (89.01%), Postives = 344/373 (92.23%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQV-ASPSNCIVHPVSK 60
           MERGRMNGNGNCDYS ESNGYHSLDLV VYG+NTPDGRSSGKTSQV +S SNCIVHPVSK
Sbjct: 1   MERGRMNGNGNCDYSCESNGYHSLDLVDVYGENTPDGRSSGKTSQVSSSSSNCIVHPVSK 60

Query: 61  LDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQS 120
            DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNTPGQS
Sbjct: 61  FDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTPGQS 120

Query: 121 SSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVY 180
           SSE TPS RLSSEFFESFQSLKLKSS Q+VSPAMSSLQGYYGLKPSDQ +R  G +MA+Y
Sbjct: 121 SSETTPS-RLSSEFFESFQSLKLKSSHQRVSPAMSSLQGYYGLKPSDQKNRTVGLEMALY 180

Query: 181 RKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWS 240
           RKGASHYLED  VSGT  H DLLTHHH+KSKSLVNG LGEKGEV DLQS EAGDGD K S
Sbjct: 181 RKGASHYLEDVPVSGTSHHLDLLTHHHKKSKSLVNGCLGEKGEVSDLQSIEAGDGDSKLS 240

Query: 241 DKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDNE 300
           DKLIRRRQKSVADFS+SPE LL+D+NS+GGSNGFSSS GKGLLAQRPKTSSR NL SDNE
Sbjct: 241 DKLIRRRQKSVADFSNSPELLLRDENSSGGSNGFSSSGGKGLLAQRPKTSSRTNLASDNE 300

Query: 301 VGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGLP 360
            GLIPIPIGLGDSF AADGFAAFRKSSSTSSLPDQENGITSSIWSQAI+TASRPIFDGLP
Sbjct: 301 GGLIPIPIGLGDSFAAADGFAAFRKSSSTSSLPDQENGITSSIWSQAITTASRPIFDGLP 360

Query: 361 KPLTGRRNKAALD 373
           KPLTGRRNKAALD
Sbjct: 361 KPLTGRRNKAALD 372

[Close]

BLAST of Lsi03G011660 vs. NCBI nr
Match: XP_004148571.1 (uncharacterized protein LOC101221951 [Cucumis sativus] >KGN58512.1 hypothetical protein Csa_002318 [Cucumis sativus])

HSP 1 Score: 633.6 bits (1633), Expect = 1.0e-177
Identity = 332/374 (88.77%), Postives = 347/374 (92.78%), Query Frame = 0


Query: 1   MERGRMNGNGNCDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVSKL 60
           MERGRMNGNGNCDYS ESNGYHSLDL  VYG+NTPDGRSSGKTSQV+S SNCIVHPVSK 
Sbjct: 1   MERGRMNGNGNCDYSCESNGYHSLDLADVYGENTPDGRSSGKTSQVSSSSNCIVHPVSKF 60

Query: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQSS 120
           DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQSS
Sbjct: 61  DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTAGQSS 120

Query: 121 SEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRIDGFDMAVYR 180
           +E++P+ RLSSEFFESFQSLKLKSSDQ+VSPAMSSLQGYYGLKPSDQ SR DG +MAVY 
Sbjct: 121 AERSPN-RLSSEFFESFQSLKLKSSDQRVSPAMSSLQGYYGLKPSDQRSRTDGLEMAVYM 180

Query: 181 KGASHYLEDAHVSGTPQHSD-LLTHHHRKSKSLVNGFLGEKGEVG-DLQSAEAGDGDPKW 240
           KGASHYLED  V GT QH D LLTHHHRKSKSLVNG LGEKGEV  D+QS EAGDGD K 
Sbjct: 181 KGASHYLEDVPVYGTSQHLDFLLTHHHRKSKSLVNGCLGEKGEVSDDVQSIEAGDGDNKL 240

Query: 241 SDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSDN 300
           SDKLIRRRQKSVADFS+SPE LLKD+NS+ GSNGFSSSAGKGLLAQRPK+SSRANL +DN
Sbjct: 241 SDKLIRRRQKSVADFSNSPEMLLKDENSSSGSNGFSSSAGKGLLAQRPKSSSRANLANDN 300

Query: 301 EVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL 360
           EVGLIPIPIGLGDSFV+ADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL
Sbjct: 301 EVGLIPIPIGLGDSFVSADGFAAFRKSSSTSSLPDQENGITSSIWSQAISTASRPIFDGL 360

Query: 361 PKPLTGRRNKAALD 373
           PKPLTGRRNKAALD
Sbjct: 361 PKPLTGRRNKAALD 373

[Close]

BLAST of Lsi03G011660 vs. NCBI nr
Match: XP_022982635.1 (uncharacterized protein LOC111481449 [Cucurbita maxima])

HSP 1 Score: 604.7 bits (1558), Expect = 5.2e-169
Identity = 325/385 (84.42%), Postives = 342/385 (88.83%), Query Frame = 0


Query: 1   MERGRMNGNGN--CDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVS 60
           MERGRMNGNGN   DYSYESNGYH+LDLV VYG+NTP GRSSGKTSQVAS SNCIVHPVS
Sbjct: 1   MERGRMNGNGNGDFDYSYESNGYHALDLVDVYGENTPIGRSSGKTSQVASSSNCIVHPVS 60

Query: 61  KLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQ 120
           K DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQ
Sbjct: 61  KFDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTSGQ 120

Query: 121 SSSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRID-GFDMA 180
           SSSEKTPS RLSSEFFESFQSLKLKSS+Q+VSPAMSSLQGYYGLKP DQ S+ID G++MA
Sbjct: 121 SSSEKTPS-RLSSEFFESFQSLKLKSSEQRVSPAMSSLQGYYGLKPLDQKSKIDGGYEMA 180

Query: 181 VYRKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPK 240
           VY KG SHYLED  VSGTP   DLLTHHHRK+KSLVNGF+GEKG++ DLQS EAGDGDPK
Sbjct: 181 VYGKGGSHYLEDVPVSGTP---DLLTHHHRKTKSLVNGFMGEKGDLTDLQSVEAGDGDPK 240

Query: 241 WSDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSD 300
           W+DKLIRRR KSVADFSH+PE LLKDDNS+GGSNGFSS+AGKG LAQRPKTSSR NL SD
Sbjct: 241 WNDKLIRRRLKSVADFSHTPEMLLKDDNSSGGSNGFSSNAGKG-LAQRPKTSSRTNLASD 300

Query: 301 NEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWS----------QAI 360
           N++GLIPIPIGLGD FVAADG   FRKSSSTSSLPDQENGITSSIWS          QAI
Sbjct: 301 NDIGLIPIPIGLGDLFVAADG---FRKSSSTSSLPDQENGITSSIWSASKWSLKPDLQAI 360

Query: 361 STASRPIFDGLPKPLTGRRNKAALD 373
           ST SRPIFDGLP PLTGRRNKAALD
Sbjct: 361 STVSRPIFDGLPIPLTGRRNKAALD 377

[Close]

BLAST of Lsi03G011660 vs. NCBI nr
Match: XP_022934623.1 (uncharacterized protein LOC111441757 [Cucurbita moschata])

HSP 1 Score: 600.5 bits (1547), Expect = 9.8e-168
Identity = 323/385 (83.90%), Postives = 339/385 (88.05%), Query Frame = 0


Query: 1   MERGRMNGNGN--CDYSYESNGYHSLDLVVVYGDNTPDGRSSGKTSQVASPSNCIVHPVS 60
           MERGRMNGNGN   DYSYESNGYH+LDLV VYG+NTP GR  GKTSQVAS SNCIVHPVS
Sbjct: 1   MERGRMNGNGNGDFDYSYESNGYHALDLVDVYGENTPIGRGRGKTSQVASSSNCIVHPVS 60

Query: 61  KLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLECLNTPGQ 120
           K DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLE LNT GQ
Sbjct: 61  KFDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLLEGLNTSGQ 120

Query: 121 SSSEKTPSQRLSSEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLKPSDQNSRID-GFDMA 180
           SSSEKTPS RLSSEFFESFQSLKLK S+Q+VSPAMSSLQGYYGLKP DQ S+ID G++MA
Sbjct: 121 SSSEKTPS-RLSSEFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKPLDQKSKIDGGYEMA 180

Query: 181 VYRKGASHYLEDAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPK 240
           VY KG SHYLED  VSGTP   DLLTHHHRK+KSLVNGFLGEKG++ DLQS EAGDGDPK
Sbjct: 181 VYGKGGSHYLEDVPVSGTP---DLLTHHHRKTKSLVNGFLGEKGDLTDLQSVEAGDGDPK 240

Query: 241 WSDKLIRRRQKSVADFSHSPETLLKDDNSNGGSNGFSSSAGKGLLAQRPKTSSRANLVSD 300
           W+DKLIRRR KSVADFSH+PE LLKDDNS+GGSNGFSS+AGKG LAQRPKTSSR NL SD
Sbjct: 241 WNDKLIRRRLKSVADFSHTPEMLLKDDNSSGGSNGFSSNAGKG-LAQRPKTSSRTNLASD 300

Query: 301 NEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQENGITSSIWS----------QAI 360
           N++GLIPIPIGLGDSFVAADG   FRKSSSTSSLPDQENGI SSIWS          QAI
Sbjct: 301 NDIGLIPIPIGLGDSFVAADG---FRKSSSTSSLPDQENGIASSIWSASKWSLKPDLQAI 360

Query: 361 STASRPIFDGLPKPLTGRRNKAALD 373
           ST SRPIFDGLP PLTGRRNKAALD
Sbjct: 361 STVSRPIFDGLPIPLTGRRNKAALD 377

[Close]

BLAST of Lsi03G011660 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 263.1 bits (671), Expect = 3.4e-70
Identity = 183/368 (49.73%), Postives = 227/368 (61.68%), Query Frame = 0


Query: 30  YGDNTPDGRSSGKTSQVASPSNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQM 89
           +G N+PD                I H +SK DTLAGVAIKYGVEVAD+KKMN LVTD QM
Sbjct: 68  HGSNSPD-------------RGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQM 127

Query: 90  FALKSLQIPLPGRHPPSPCLLECLNTPGQSSS--EKTPSQRLSSEFFESFQSLKLKSSDQ 149
           FALKSLQIPLPGRHPPSPCL       G+  S  E         E F+SFQSL+LKSS++
Sbjct: 128 FALKSLQIPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHSEQEVFDSFQSLRLKSSEK 187

Query: 150 KVSPAMSSLQGYYGLKPSDQNSRIDG-FDMAVYRKGASHYL----EDAHVSGTPQHSDLL 209
           KVSPAM SLQGYYGLKP+D+     G F+M  Y+   SH++    ++ ++   P  +  L
Sbjct: 188 KVSPAMYSLQGYYGLKPADRTVSDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPL 247

Query: 210 THHHRKSKSLVNGFLGEKGEVGDLQSAEAGDGDPKWSDKLIRRRQKSVADF-SHSPETLL 269
            +HHRKS+SLVN  + E  +  D  + E        SDK +RRRQKS ADF S +PE +L
Sbjct: 248 -NHHRKSRSLVNALIEEVNQSPDNNTQE------PTSDKFMRRRQKSEADFSSRTPELVL 307

Query: 270 KDDNSNGGSN-GFSSSAGKGLLAQRPKTSSRANLVSDNEVG-LIPIPIGLGDSFVAADGF 329
           K++  NG SN GF S AGKG LA R K SSR NL +++E G   P+ + L D+ V +D F
Sbjct: 308 KEE--NGSSNGGFLSIAGKG-LALRSKASSRTNLAAESENGNFNPVSMNLMDAPV-SDSF 367

Query: 330 AAFRKSSSTSSLPDQE---NGITSSIW------------SQAISTASRPIFDGLPKPLTG 373
           ++ RKSSS SSL D +   N  + S+W            + A  T+S  IFDGLPKPLTG
Sbjct: 368 SSVRKSSSASSLQDPDGNSNNGSLSLWPTSKWSLKPDLLTPAAITSS--IFDGLPKPLTG 409

[Close]

BLAST of Lsi03G011660 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-68
Identity = 188/402 (46.77%), Postives = 246/402 (61.19%), Query Frame = 0


Query: 2   ERG-RMNG-NGNCDYSYES-NGYHSLDLVVVYGDNTPDGRSS---------GKTSQVASP 61
           ERG R++G NG+ ++S     GY  +D    + + +P    S           +S  +S 
Sbjct: 4   ERGRRISGFNGSFEFSNRKFRGYGFVDRSQGFHERSPSRSCSVSKILRITPPTSSPPSSA 63

Query: 62  SNC---IVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPS 121
           S C   I H VSK DTLAG+AIKYGVEVADI K+NGLVTD QMFAL+SL+IPLPGRHPPS
Sbjct: 64  STCAGYIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPLPGRHPPS 123

Query: 122 PCLLECLNTPGQSSSEKTPSQRLS---SEFFESFQSLKLKSSDQKVSPAMSSLQGYYGLK 181
           PCL       G+  SE+  S   +    + F+SFQSL+L  S++K+SPAM+SLQGYYGLK
Sbjct: 124 PCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPAMNSLQGYYGLK 183

Query: 182 PSDQNSRIDGFDMAVYRKGASHYLE-DAHVSGTPQHSDLLTHHHRKSKSLVNGFLGEKGE 241
           P ++ +  +GF MAVY+  AS   + D +++  P  S  L+ HHRKS+SLV+  + E  +
Sbjct: 184 PKNRRAS-EGFGMAVYKNEASQLQDNDQYLTPFPATSTPLS-HHRKSRSLVDAVIAEVNQ 243

Query: 242 VGDLQSAEAGDGDPKWSDKLIRRRQKSVADF-SHSPETLLKDDNSNGGSNGFSSSAGKGL 301
                 ++AG G+   +DK +RRRQKS ADF S +PE LLK++N    S  FS+ AGK  
Sbjct: 244 --SPNPSKAGGGEVNSTDKPMRRRQKSEADFSSRAPELLLKEEN-RSSSGAFSAIAGKN- 303

Query: 302 LAQRPKTSSRANLVSDNEVGLIPIPIGLGDSFVAADGFAAFRKSSSTSSLPDQE-NGITS 361
           LA R K SSRANL ++    L  IPI L D+ V  D F++ RKS S SSL +   N   S
Sbjct: 304 LALRSKASSRANLSAETR-HLNSIPINLMDAPV-GDSFSSVRKSVSASSLQEPNCNSNGS 363

Query: 362 SIWSQAIST----------ASRPIFDGLPKPLTGRRNKAALD 373
           S+W  +  T           +  IFDGLPKPLTGRRNK A+D
Sbjct: 364 SLWPTSKWTLKPELLTQVAMASSIFDGLPKPLTGRRNKKAVD 397

The following BLAST results are available for this feature:

BLAST of Lsi03G011660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3B7I8	3.8e-05	45.31	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
Q8IV50	2.5e-04	33.33	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapi...	[more]
Q9D7V2	3.2e-04	34.65	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Mus muscu...	[more]

BLAST of Lsi03G011660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BYK1	6.0e-179	89.01	Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucu...	[more]
A0A1S3CG46	6.0e-179	89.01	uncharacterized protein LOC103500354 OS=Cucumis melo OX=3656 GN=LOC103500354 PE=...	[more]
A0A0A0LCX1	5.0e-178	88.77	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G653440 PE=4 S...	[more]
A0A6J1J3A0	2.5e-169	84.42	uncharacterized protein LOC111481449 OS=Cucurbita maxima OX=3661 GN=LOC111481449...	[more]
A0A6J1F865	4.7e-168	83.90	uncharacterized protein LOC111441757 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of Lsi03G011660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906142.1	3.3e-192	94.09	uncharacterized protein LOC120092022 [Benincasa hispida]	[more]
XP_008461847.1	1.2e-178	89.01	PREDICTED: uncharacterized protein LOC103500354 [Cucumis melo] >KAA0052766.1 Pep...	[more]
XP_004148571.1	1.0e-177	88.77	uncharacterized protein LOC101221951 [Cucumis sativus] >KGN58512.1 hypothetical ...	[more]
XP_022982635.1	5.2e-169	84.42	uncharacterized protein LOC111481449 [Cucurbita maxima]	[more]
XP_022934623.1	9.8e-168	83.90	uncharacterized protein LOC111441757 [Cucurbita moschata]	[more]

BLAST of Lsi03G011660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08200.1	3.4e-70	49.73	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.1e-68	46.77	Peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 54..98 e-value: 0.0027 score: 27.0
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 53..97 score: 11.612978
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 61..97 e-value: 2.12335E-5 score: 39.3909
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 38..104 e-value: 3.3E-11 score: 44.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..285
None	No IPR available	PANTHER	PTHR20932:SF36	PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN	coord: 38..372
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 38..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G011660.1	Lsi03G011660.1	mRNA