Lsi03G011190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G011190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 24
Locationchr03: 21394932 .. 21399486 (+)
RNA-Seq ExpressionLsi03G011190
SyntenyLsi03G011190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAGAGGAAGTTCGGCTTTGAAGGGTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCTCAAGCTCCTCAGCGGCTTTATGTCCCTCCTTCGTCGCGAGGCCATGGGCACGACAACTACGAAGATACTGATGTTGATAATATAGAATATGATGATAATGGTGCGGAGGAGGCGAGTGGTAACGACGATGTTGGTGCTGGCGCTGCCGGTGCTGAAGAAGAAGAAATTGATCCTTTAGATGCATTCATGGAGGGAATTCACGAAGAAATGAAAGCGCCGCCGCCGCCGAAACCGAATGAGAAGGTGGATAAGTATAGGGACGACGAGGAGGATGATCCAATGGAGAGCTTTCTGAGGGCCAAGAAGGACGTGGGACTGACGCTGGCAGCTGATGCGCTTCATGCTGGTTATGATTCGGACGAGGAGGTTTATGCGGCAGCTAAGGCTGTGGATGCGGGGATGGTTGAATACGACTCTGATGATAATATGCTGATTATTGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCATAGCTCCATTGATTACGAACCGTTCAATAAAGATTTCTACGAGGAGAAAGCTTCAATATCAGGTCACTTATTAGTTGGAACTTATGGTTCGGTTATATTTCAGTATTGCTTTTGCACTTTTTCTTATTTCTTCTCTCTGGCTTAGGTGACTGCCTCCGTTAAGTTTGTGCATCATGGCCATTAATTTATCTTCTCATAATGTTGGACCGAAATTGTAAATTTTTGTTTCTCTCTTTTTGGGGAAGGAAGAGCTGTATGATATATGGAAACTACGATTTCTTTTCCTTGTGAGGAAGAGTTAAAGATTTGATAAGATATGCAAATTTCATTCCGTTTAATTATTTTCAATACTTCAGGTTTTGGCCTTTTCAACTTAATCAAAACAAGAAATTGGGTAAAATATAATTCCCAATTGAAAGATTTTCTTTTTTCTAATGAAATGTGTGGATTTGTGTGCGTATATTGTTACTTACCATTTTTATTTTTGCTGTTTTATATGTCTGACGACATCTCCTCTTTTTTTTTTTTCCCTTGCCTCCCTTGTTTAGAGTTTCCTAGGATAAACTTGCTGAGCGTTTGGAGAATTTAAATTATTAATTCTGTTTCTAAATTTGATGAGTGTTTTCTTTTCCGTATTTTGTCTTTAGGGATGAGTGAAGAGGAAGTTTCTGAGTACCGGAAGAGTTTGGCTATTCGTGCGTCGGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGATTGTGGATTTTCCCCTCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCTGGGGGAGATATCATTGGAATAGCAAAAACTGGTTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATCGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCGAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTTGATCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACCCCTGGCAGATTAATAGATATGATCAAATTGAAAGCTTTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCTGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTCGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCTCGTAAGGTTGAAAAATTAGCCCGAGAAATTCTCACCGATCCTGTAAGAGTTACAGTAGGAGAGGTTGGGATGGCTAACGAAGATATCACACAGGTTGTTCATGTTCTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATTGATGATGGTGATGTATTGGTATTTGCTTCTAAAAAAGCCACAGTAGATGAGATTGAATCTCAACTTTTGCAGAAGGGTTTTAAGGCTGCAGCTCTTCATGGTGACAAGGACCAGGCATCTCGAATGGAAACTCTGCAAAAGTTCAAATCTGGCGTTTATCATGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCAATCAAGTCCGTTGTAAACTTTGACATTGCTAAAGACATGGACATGCATGTTCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAGAGCACACACTCTTATAACCCAGAAAGAGGCTCGCTTTGCTGGCGAGTTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCGGTTGAACTGATGGATCTGGCAATGAAGGTACTTTTTCTTTATATGCTGCATATTATTAGGTTCAGTGTAAGCCGATGACTTATGGAACTATGCTTATAAATTGCCTCTTTCTTTCCAAGTTGTTTAAAACTTGAAATCAGTAATTCTTTTTCCTTTTTTTTTTTCTTTCTGGGAAAGATATCCTTTTGGTCATCTATGCGTTTCGAGTATAGTTTCTATTTGGTTTACAAAGTTTCAAAATGTTACATTTTCATCATTGAGTTTTAAGTTTAGTTTCCATTCTGTCCTAGGTTTCAAGATTTTACACTTTTACAAATTTGTTTTCACTAATGATCACTTTTAGTCTTATTTATTAATTTTCTATTAATTAATTTAAACGAATTAAATTAGTTTTTACTAAAATTTCGTCACTATTAAAATTAATTAAAAAGTCTACATCATAATTATTTAATTTAGCTAACTTAAGCTAACGGTCCGAAATTTAAAAAGAAAAAAAGAAAAAAAAAACACTAAGGTCCGAAATTTAGAAAGAAAAAAAGCAAAATAAAACACTAAGGTCCGAATCTAAGCATTAGTGAAAACTTAGGGACAAAGTTTATAATGATGAAAACTAAACTAAAAATCCAATAGTGAAGTGTAACATTTGAATTTTGTGGACCAAATAAAAACTAAACTAAAAAATGCAAGGTTAGGGACCAAATAGAAGCTATACTCAAAACTTATGGACCAAAGAGTGCTTTTCTCAATATCTTTTATTTTATATATATGTATGTATGTTTATGTATGTGTGTATATATATGTGTGTATATATATAACAGAATATGGCTTCTTGGTCTTGTATTATTTCTCTGTCTGGCAATGCCTTGTGGGCTTTTGTGGCTGATTCTTTTGTAATCGTTTATTATTTTGTATTATTAACAATTGGGGCTCCCTCTTGTAATCTTTTGGATGCTTTCTATGGTTCTTAGGTGTGCATGTGTGTTTTCTTAATAGCCTTGCTTATTCTTGTTCTTTCATTAAGCTTTCTTCCAGTTCTTTTTCCTGATTGTGACGGCTAGTTGTTTGAGAAAGTTGCTATTATAATCTTTTGCTGAACCATTTGCCTTTGCAATCATTATAGGATGGGCGATTCAGGTCAAAGCGTGATGCAAGGAAAAAAGGAGGTATTATTCAACGCCCCATCTTTCATTCTTTTTTCTCGAGGAAAGTTTGTATTTCATGGAAAAAGAAAAAATCAGTGTATTGATTAAATCTCTCAATCCCAATTATATATTTATGCAATTGTTGTCTTTGTAGGTGGTGGTGGTGGGAAAAAGGGTAAGAGTCGAGGCAGCAATGGTCGAGGCGTGCGTGGAGTGGATTTTGGTCTTGGAATTGGTTATAATCCAGAAAGCAGTGGTAGTACTCCTTCAACAACCAATGTTCAAAGTCGATCTGCAGCTGTAAATTCTTTGAGGACAGGAATGATGGCGCAGTTTAAGAGCAATTTCGTTGCCGCTTCATCAGCCCCCCCAAGTCAGGGTTCAAGTAACAGTTATAGCGTGCCAGCAAACAAAAGGCCAACATTATCAGGCTTTGTATCTGGTGGTTCGATCGGCGGCGGTGCGAACAGCCCAGCACCCCCAGTGTCGAGAGTGAACCCGTACATGCCAAATGCTGTAGAATATTCAAGCCAACAGAACTCAGAAAGGTTGTAAATCAAATCCCTTTCTGTTTGTTGGAACTTTTATTACTATGTATACTTTTATCAATATCCTCATTTGGTGGCTTATATCATCTCATTGCAGTTCTAGTGATAGACCCCGAGAAAGGAAGAGACCCTCTGGTTGGGACAGATGACAGCCTAGAATTGAAGGAATGTTAAAAACTCAATAGTATTGAGAAATCTGGTATGATTAAACTCAATAGTGTAAGCCCCTTTATTTTGTTTAAGTTTGTTATACCAGTGTATGATTTTAGCTAATGAGGTTGTAGAAATTGTCTGGTATAAATCGTTACCTGTGTCATTGTCTCACTCTCCCTCTTAATATAAATCTTTGCCTCTATTTTTTCTTTCTTGGTCAAAGGATAACTCCTTAGCCAGCTGACTATAATTTATGGACTTCATACGTCACTATTAAAGATTAAATTATAAATTTCAACTTTGAGGTTTGTGTCT

mRNA sequence

ATGTCAAAGAGGAAGTTCGGCTTTGAAGGGTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCTCAAGCTCCTCAGCGGCTTTATGTCCCTCCTTCGTCGCGAGGCCATGGGCACGACAACTACGAAGATACTGATGTTGATAATATAGAATATGATGATAATGGTGCGGAGGAGGCGAGTGGTAACGACGATGTTGGTGCTGGCGCTGCCGGTGCTGAAGAAGAAGAAATTGATCCTTTAGATGCATTCATGGAGGGAATTCACGAAGAAATGAAAGCGCCGCCGCCGCCGAAACCGAATGAGAAGGTGGATAAGTATAGGGACGACGAGGAGGATGATCCAATGGAGAGCTTTCTGAGGGCCAAGAAGGACGTGGGACTGACGCTGGCAGCTGATGCGCTTCATGCTGGTTATGATTCGGACGAGGAGGTTTATGCGGCAGCTAAGGCTGTGGATGCGGGGATGGTTGAATACGACTCTGATGATAATATGCTGATTATTGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCATAGCTCCATTGATTACGAACCGTTCAATAAAGATTTCTACGAGGAGAAAGCTTCAATATCAGGTCACTTATTAGTTGGAACTTATGGGATGAGTGAAGAGGAAGTTTCTGAGTACCGGAAGAGTTTGGCTATTCGTGCGTCGGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGATTGTGGATTTTCCCCTCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCTGGGGGAGATATCATTGGAATAGCAAAAACTGGTTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATCGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCGAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTTGATCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACCCCTGGCAGATTAATAGATATGATCAAATTGAAAGCTTTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCTGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTCGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCTCGTAAGGTTGAAAAATTAGCCCGAGAAATTCTCACCGATCCTGTAAGAGTTACAGTAGGAGAGGTTGGGATGGCTAACGAAGATATCACACAGGTTGTTCATGTTCTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATTGATGATGGTGATGTATTGGTATTTGCTTCTAAAAAAGCCACAGTAGATGAGATTGAATCTCAACTTTTGCAGAAGGGTTTTAAGGCTGCAGCTCTTCATGGTGACAAGGACCAGGCATCTCGAATGGAAACTCTGCAAAAGTTCAAATCTGGCGTTTATCATGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCAATCAAGTCCGTTGTAAACTTTGACATTGCTAAAGACATGGACATGCATGTTCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAGAGCACACACTCTTATAACCCAGAAAGAGGCTCGCTTTGCTGGCGAGTTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCGGTTGAACTGATGGATCTGGCAATGAAGGATGGGCGATTCAGGTCAAAGCGTGATGCAAGGAAAAAAGGAGGTGGTGGTGGTGGGAAAAAGGGTAAGAGTCGAGGCAGCAATGGTCGAGGCGTGCGTGGAGTGGATTTTGGTCTTGGAATTGGTTATAATCCAGAAAGCAGTGGTAGTACTCCTTCAACAACCAATGTTCAAAGTCGATCTGCAGCTGTAAATTCTTTGAGGACAGGAATGATGGCGCAGTTTAAGAGCAATTTCGTTGCCGCTTCATCAGCCCCCCCAAGTCAGGGTTCAAGTAACAGTTATAGCGTGCCAGCAAACAAAAGGCCAACATTATCAGGCTTTGTATCTGGTGGTTCGATCGGCGGCGGTGCGAACAGCCCAGCACCCCCAGTGTCGAGAGTGAACCCGTACATGCCAAATGCTGTAGAATATTCAAGCCAACAGAACTCAGAAAGGTTGTAAATCAAATCCCTTTCTGTTTGTTGGAACTTTTATTACTATGTATACTTTTATCAATATCCTCATTTGGTGGCTTATATCATCTCATTGCAGTTCTAGTGATAGACCCCGAGAAAGGAAGAGACCCTCTGGTTGGGACAGATGACAGCCTAGAATTGAAGGAATGTTAAAAACTCAATAGTATTGAGAAATCTGGTATGATTAAACTCAATAGTGTAAGCCCCTTTATTTTGTTTAAGTTTGTTATACCAGTGTATGATTTTAGCTAATGAGGTTGTAGAAATTGTCTGGTATAAATCGTTACCTGTGTCATTGTCTCACTCTCCCTCTTAATATAAATCTTTGCCTCTATTTTTTCTTTCTTGGTCAAAGGATAACTCCTTAGCCAGCTGACTATAATTTATGGACTTCATACGTCACTATTAAAGATTAAATTATAAATTTCAACTTTGAGGTTTGTGTCT

Coding sequence (CDS)

ATGTCAAAGAGGAAGTTCGGCTTTGAAGGGTTTGGAATCAACCGGCAAACGACTTACAATTTCGAGCGCTCTCAAGCTCCTCAGCGGCTTTATGTCCCTCCTTCGTCGCGAGGCCATGGGCACGACAACTACGAAGATACTGATGTTGATAATATAGAATATGATGATAATGGTGCGGAGGAGGCGAGTGGTAACGACGATGTTGGTGCTGGCGCTGCCGGTGCTGAAGAAGAAGAAATTGATCCTTTAGATGCATTCATGGAGGGAATTCACGAAGAAATGAAAGCGCCGCCGCCGCCGAAACCGAATGAGAAGGTGGATAAGTATAGGGACGACGAGGAGGATGATCCAATGGAGAGCTTTCTGAGGGCCAAGAAGGACGTGGGACTGACGCTGGCAGCTGATGCGCTTCATGCTGGTTATGATTCGGACGAGGAGGTTTATGCGGCAGCTAAGGCTGTGGATGCGGGGATGGTTGAATACGACTCTGATGATAATATGCTGATTATTGAGAAGAAAAAAATCGAACCAATTCCTGCTCTAGATCATAGCTCCATTGATTACGAACCGTTCAATAAAGATTTCTACGAGGAGAAAGCTTCAATATCAGGTCACTTATTAGTTGGAACTTATGGGATGAGTGAAGAGGAAGTTTCTGAGTACCGGAAGAGTTTGGCTATTCGTGCGTCGGGTTTTGACGTTCCCAGGCCAATTAAAACATTTGAAGATTGTGGATTTTCCCCTCAACTTATGAATGCTATAAAAAAGCAAGGGTATGAGAAGCCTACTTCTATACAGTGCCAAGCTATGCCAATTGTGCTTTCTGGGGGAGATATCATTGGAATAGCAAAAACTGGTTCTGGTAAGACTGCTGCTTTTGTTCTTCCGATGATTGTTCATATTATGGATCAACCTGAACTTGAAAAAGAAGAGGGTCCTATCGGAGTGATCTGTGCACCCACCAGAGAACTTGCACACCAAATATACCTAGAGTGTAAAAAATTTTCGAAAGCACATGGGCTACGTGTCTCTGCAGTATATGGTGGGATGTCTAAATTTGATCAGCTTAAAGAACTCAAAGCTGGGTGTGAGATAGTTGTTGCCACCCCTGGCAGATTAATAGATATGATCAAATTGAAAGCTTTGACAATGTCAAAAGCCACATACTTGGTACTTGATGAAGCTGATAGAATGTTTGACCTTGGATTTGAACCCCAAATTCGTTCCATTGTTGGTCAGATTCGGCCAGACCGTCAGACCTTACTCTTTTCTGCAACTATGCCTCGTAAGGTTGAAAAATTAGCCCGAGAAATTCTCACCGATCCTGTAAGAGTTACAGTAGGAGAGGTTGGGATGGCTAACGAAGATATCACACAGGTTGTTCATGTTCTTCCTTCTGATTTGGAGAAGTTGCCTTGGCTTCTTGAGAAGTTACCTGAAATGATTGATGATGGTGATGTATTGGTATTTGCTTCTAAAAAAGCCACAGTAGATGAGATTGAATCTCAACTTTTGCAGAAGGGTTTTAAGGCTGCAGCTCTTCATGGTGACAAGGACCAGGCATCTCGAATGGAAACTCTGCAAAAGTTCAAATCTGGCGTTTATCATGTTCTTATTGCAACTGATGTTGCTGCCCGTGGGCTTGACATTAAGTCAATCAAGTCCGTTGTAAACTTTGACATTGCTAAAGACATGGACATGCATGTTCATCGTATTGGTAGAACAGGTCGTGCGGGTGACAAGGATGGGAGAGCACACACTCTTATAACCCAGAAAGAGGCTCGCTTTGCTGGCGAGTTAGTTAATAGTTTGATTGCTGCTGGCCAGAATGTTTCGGTTGAACTGATGGATCTGGCAATGAAGGATGGGCGATTCAGGTCAAAGCGTGATGCAAGGAAAAAAGGAGGTGGTGGTGGTGGGAAAAAGGGTAAGAGTCGAGGCAGCAATGGTCGAGGCGTGCGTGGAGTGGATTTTGGTCTTGGAATTGGTTATAATCCAGAAAGCAGTGGTAGTACTCCTTCAACAACCAATGTTCAAAGTCGATCTGCAGCTGTAAATTCTTTGAGGACAGGAATGATGGCGCAGTTTAAGAGCAATTTCGTTGCCGCTTCATCAGCCCCCCCAAGTCAGGGTTCAAGTAACAGTTATAGCGTGCCAGCAAACAAAAGGCCAACATTATCAGGCTTTGTATCTGGTGGTTCGATCGGCGGCGGTGCGAACAGCCCAGCACCCCCAGTGTCGAGAGTGAACCCGTACATGCCAAATGCTGTAGAATATTCAAGCCAACAGAACTCAGAAAGGTTGTAA

Protein sequence

MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAEEASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSERL
Homology
[Close]
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match: O22907 (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2)

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 574/767 (74.84%), Postives = 658/767 (85.79%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MS RKFG EGFGINRQT+Y+FERSQAPQRLYVPPSSR  G DN ED D+DNI+Y +N   
Sbjct: 1   MSNRKFGMEGFGINRQTSYSFERSQAPQRLYVPPSSR--GGDNSEDADLDNIDYMENEEA 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           E    +   A A+G E +EIDPLDAFMEGIH+EMK+ PPPKP EK+++Y+DD +DDP+ES
Sbjct: 61  EEDIEEGGSAAASGGEVDEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDD-DDDPVES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           +L+AKKD+GLTLAADAL+AGY+SDEEVYAAAKAVDAGM++YDSDDN ++++K+KIEPI A
Sbjct: 121 YLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEP NKDFYEE  SIS        GM+E+E ++YR+ L IR SGFDV RP+KT
Sbjct: 181 LDHSSIDYEPINKDFYEELESIS--------GMTEQETTDYRQRLGIRVSGFDVHRPVKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFS Q+M+AIKKQ YEKPT+IQCQA+PIVLSG D+IGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPEL+++EGPIGVICAPTRELAHQI+LE KKFSKA+GLRVSAVYGGMSK +Q KELK
Sbjct: 301 IMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDM+K+KALTM +A+YLVLDEADRMFDLGFEPQ+RSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMP KVEKLAREIL+DP+RVTVGEVGMANEDITQVV+V+PSD EKLPWLLEKLP 
Sbjct: 421 LLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPG 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MID+GDVLVFASKKATVDEIE+QL    FK AALHGDKDQASRMETLQKFKSGV+HVLIA
Sbjct: 481 MIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKS+K+VVN+DIAKDMDMHVHRIGRTGRAGD+DG A+TL+TQ+EARFAGEL
Sbjct: 541 TDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSL+AAGQNV  EL DLAMKDGRF+SKRD RK     GGKKG+  G   +GVRGVDFGL
Sbjct: 601 VNSLVAAGQNVPPELTDLAMKDGRFKSKRDGRK-----GGKKGRGGGGGNKGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIG++ ESS  TPS+    SRS A+NS+RTG+MAQFK++FVAA+   PS   + +Y    
Sbjct: 661 GIGFSSESS-RTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAAT---PSNPQNQAY---P 720

Query: 721 NKRPTLSGFVSGGSIGGG---ANSPAPPVSRVNPYMPNAVEYSSQQN 765
           NKRP+L GFVSGG+IGG      S APPV+       NA  ++S QN
Sbjct: 721 NKRPSLMGFVSGGTIGGDMGRTQSQAPPVAPTQ----NASSHNSSQN 740

[Close]
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match: Q10MH8 (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 1030.4 bits (2663), Expect = 1.0e-299
Identity = 563/773 (72.83%), Postives = 631/773 (81.63%), Query Frame = 0 

Query: 1   MSKR-KFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGA 60
           MSKR K G  GF I R T+Y+FERSQ PQRLYVP           +D D+D+I + D+ A
Sbjct: 1   MSKRPKLG--GFSIPRPTSYSFERSQPPQRLYVPA----------DDPDLDDIAFSDDAA 60

Query: 61  EEASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPME 120
             +      G GAAG +EEEIDPLDAFM  I EE++APPP    E + +   D+EDDP+E
Sbjct: 61  APSDAPPAGGGGAAG-DEEEIDPLDAFMAEIQEEIRAPPPAPKPEALRRADSDDEDDPVE 120

Query: 121 SFLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIP 180
           SFLRAKKD GL LAADA+HAGYDSDEEVYAAAKAVDAGM+EYDSDDN ++++KKKIEPIP
Sbjct: 121 SFLRAKKDSGLALAADAMHAGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIP 180

Query: 181 ALDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIK 240
            LDHS+I+YEPFNKDFYEEK S+S        GMSE+EV++Y KSLAIR SGFDVPRPIK
Sbjct: 181 PLDHSTIEYEPFNKDFYEEKPSVS--------GMSEQEVADYMKSLAIRVSGFDVPRPIK 240

Query: 241 TFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIV 300
           +F DCGF  QLMNAI KQGYEKPT+IQCQA+PIVLSG DIIGIAKTGSGKTAAFVLPMIV
Sbjct: 241 SFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIV 300

Query: 301 HIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKEL 360
           HIMDQPELEKEEGPIGV+CAPTRELAHQIYLE KKF+K + LRV+AVYGG+SKFDQ KEL
Sbjct: 301 HIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKEL 360

Query: 361 KAGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQ 420
           KAGCEIV+ATPGRLID++K+KAL M +ATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQ
Sbjct: 361 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQ 420

Query: 421 TLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLP 480
           TLLFSATMP KVE+LAREILTDP+RVTVG+VG ANEDI QVV+VLPSD EK+PWLLEKLP
Sbjct: 421 TLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLP 480

Query: 481 EMIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLI 540
            MIDDGDVLVFA+KKA VDEIESQL Q+GF+ AALHGDKDQASRMETLQKFKSGVYHVL+
Sbjct: 481 GMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLV 540

Query: 541 ATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGE 600
           ATDVAARGLDIKSIK+VVNFDIAK+MDMH+HRIGRTGRAGDKDG A+TLITQKE RFAGE
Sbjct: 541 ATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGE 600

Query: 601 LVNSLIAAGQNVSVELMDLAMKDGRFRSKRDARK--------KGGGGGGKKGKSRGSNGR 660
           LV+ LIAAGQ+V  ELMDLAMKDGRFR+ RD+RK        KGGGGGG  G      GR
Sbjct: 601 LVHCLIAAGQDVPNELMDLAMKDGRFRANRDSRKGGKKSGKGKGGGGGGGGGSGARGRGR 660

Query: 661 GVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQG 720
           GVRGVDFGLGIGYN E SGS P+      RSAA+NSL+TGMM  FKS+FV+ASS+     
Sbjct: 661 GVRGVDFGLGIGYNAE-SGSVPA-----PRSAALNSLKTGMMQNFKSSFVSASSSNTPSN 720

Query: 721 SSNSYSVPAN-KRPTLSGFVSGGSIGGGANS-----PAPPVSRVNPYMPNAVE 759
           S+ S   P++  RP L GFVSGG+IGG AN      PAP     +    N VE
Sbjct: 721 SAPSRGAPSSFVRPALRGFVSGGTIGGDANQARAVLPAPSFVPASRPAENTVE 746

[Close]
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match: Q810A7 (ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3)

HSP 1 Score: 520.8 bits (1340), Expect = 2.7e-146
Identity = 332/797 (41.66%), Postives = 454/797 (56.96%), Query Frame = 0 

Query: 2   SKRKFGFEGFGIN-------------------RQTTYNFERSQAPQ--RLYVPPSSRG-- 61
           +KR FGF GF I+                     ++  F +S  PQ    Y   S R   
Sbjct: 10  TKRGFGFGGFAISAGKKEEAKLPQQSHSAFGAASSSSGFGKSAPPQLPSFYKIGSKRANF 69

Query: 62  ---HGHDNYEDTDVDNIEYDDNGAEEASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEE-- 121
              + +   E+ D  N++     AE +       +  A ++ ++ DPL+AFM  + ++  
Sbjct: 70  DEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDD-DPLEAFMAEVEDQAA 129

Query: 122 ---MKAPPPPKPNEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYA 181
               +     K  + V   RDD EE+D  E++ R                 Y ++     
Sbjct: 130 RDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFR-----------------YMAENPTAG 189

Query: 182 AAKAVDAGMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVG 241
             +  +   +EYDSD N +   KK I+P+P +DHS IDY PF K+FY E   I+      
Sbjct: 190 VVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEIT------ 249

Query: 242 TYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQA 301
              ++ +++ + R  L +R SG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ 
Sbjct: 250 --NLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQG 309

Query: 302 MPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIY 361
           +P+ LSG D+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+
Sbjct: 310 VPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIH 369

Query: 362 LECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALTMSKATY 421
            ECK+F KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + +Y
Sbjct: 370 AECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSY 429

Query: 422 LVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGE 481
           LV DEADRMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+
Sbjct: 430 LVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGD 489

Query: 482 VGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGF 541
           +G ANED+TQ+V +L S   K  WL  +L E    G VL+F +KKA  +E+ S L Q+G 
Sbjct: 490 IGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGH 549

Query: 542 KAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHV 601
               LHGD DQ+ R + +  FK     VL+ATDVAARGLDI SIK+V+N+D+A+D+D H 
Sbjct: 550 NLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHT 609

Query: 602 HRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRFRSKR 661
           HRIGRTGRAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR  R
Sbjct: 610 HRIGRTGRAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSR 669

Query: 662 DARKKGG----GGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAV 721
               KG     GGGG   + R   G G    D G             PST  +  R   +
Sbjct: 670 FKGGKGKKLNIGGGGLGYRER--PGLGSENSDRGNNNNVMSNYEAYKPSTGAMGDR---L 729

Query: 722 NSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPANKRPTLSGFVSGGSIGG-------- 755
            +++    +Q+KS+FVAAS +    G+S++ +         SG+ S GS+          
Sbjct: 730 TAMKAAFQSQYKSHFVAASLSNQKAGTSSAGA---------SGWTSAGSLNSVPTNSAQQ 765

[Close]
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match: Q86XP3 (ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 6.6e-145
Identity = 332/797 (41.66%), Postives = 453/797 (56.84%), Query Frame = 0 

Query: 2   SKRKFGFEGFGIN-------------------RQTTYNFERSQAPQ--RLYVPPSSRG-- 61
           +KR FGF GF I+                     ++  F +S  PQ    Y   S R   
Sbjct: 10  TKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYKIGSKRANF 69

Query: 62  ---HGHDNYEDTDVDNIEYDDNGAEEASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEE-- 121
              + +   E+ D  N++     AE +       +    ++ ++ DPL+AFM  + ++  
Sbjct: 70  DEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDD-DPLEAFMAEVEDQAA 129

Query: 122 ---MKAPPPPKPNEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYA 181
               +     K  + V   RDD EE+D  E++ R                 Y ++     
Sbjct: 130 RDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFR-----------------YMAENPTAG 189

Query: 182 AAKAVDAGMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVG 241
             +  +   +EYDSD N +   KK I+P+P +DHS IDY PF K+FY E   I+      
Sbjct: 190 VVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEIT------ 249

Query: 242 TYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQA 301
              ++ +++ + R  L +R SG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ 
Sbjct: 250 --NLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQG 309

Query: 302 MPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIY 361
           +P+ LSG D+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+
Sbjct: 310 VPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIH 369

Query: 362 LECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALTMSKATY 421
            ECK+F KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + +Y
Sbjct: 370 AECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSY 429

Query: 422 LVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGE 481
           LV DEADRMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+
Sbjct: 430 LVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGD 489

Query: 482 VGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGF 541
           +G ANED+TQ+V +L S   K  WL  +L E    G VL+F +KKA  +E+ + L Q+G 
Sbjct: 490 IGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGH 549

Query: 542 KAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHV 601
               LHGD DQ+ R + +  FK     VL+ATDVAARGLDI SIK+V+N+D+A+D+D H 
Sbjct: 550 NLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHT 609

Query: 602 HRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRFRSKR 661
           HRIGRTGRAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR  R
Sbjct: 610 HRIGRTGRAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSR 669

Query: 662 DARKKGG----GGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAV 721
               KG     GGGG   + R   G G   +D G             PST  +  R   +
Sbjct: 670 FKGGKGKKLNIGGGGLGYRER--PGLGSENMDRG-NNNVMSNYEAYKPSTGAMGDR---L 729

Query: 722 NSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPANKRPTLSGFVSGGSIGG-------- 755
            +++    +Q+KS+FVAAS +    GSS + +         SG+ S GS+          
Sbjct: 730 TAMKAAFQSQYKSHFVAASLSNQKAGSSAAGA---------SGWTSAGSLNSVPTNSAQQ 764

[Close]
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match: Q5F485 (ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 2.5e-144
Identity = 330/791 (41.72%), Postives = 454/791 (57.40%), Query Frame = 0 

Query: 2   SKRKFGFEGFGIN---------RQTTYN----------FERSQAPQ--RLYVPPSSRGHG 61
           +KR FGF GF I           Q +++          F +S  PQ    Y   S R + 
Sbjct: 10  TKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFYKIGSKRANF 69

Query: 62  HDN---YEDTDVD--NIEYDDNGAEEASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEE-- 121
            +    +ED + D  N++     AE +       + +A ++ ++ DPL+AFM  + ++  
Sbjct: 70  DEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDD-DPLEAFMAEVEDQAA 129

Query: 122 ---MKAPPPPKPNEKVDKYRDD-EEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYA 181
               +     K  +     RDD EE+D  E++ R                 Y ++     
Sbjct: 130 RDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFR-----------------YMAENPTAG 189

Query: 182 AAKAVDAGMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVG 241
             +  +   +EYDSD N +   KK I+P+P +DHS I+Y PF K+FY+E   I+      
Sbjct: 190 VVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEIT------ 249

Query: 242 TYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQA 301
              ++ ++V E R  L +R SG   PRP  +F   GF  QLM+ I+K  Y +PT IQCQ 
Sbjct: 250 --SLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQG 309

Query: 302 MPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIY 361
           +P+ +SG D+IGIAKTGSGKTAAF+ PM++HIMDQ ELE  +GPI VI  PTREL  QI+
Sbjct: 310 VPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIH 369

Query: 362 LECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIKLKALTMSKATY 421
            ECK+F KA+ LR  AVYGG S ++Q K L+ G EIVV TPGRLID +K KA  + + TY
Sbjct: 370 SECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTY 429

Query: 422 LVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGE 481
           LV DEADRMFD+GFE Q+RSI   +RPDRQTLLFSAT  +K+EKLAR+IL DP+RV  G+
Sbjct: 430 LVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGD 489

Query: 482 VGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGF 541
           +G ANED+TQ+V + PS   K  WL  +L E    G VL+F +KKA  +E+ + L Q+  
Sbjct: 490 IGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDH 549

Query: 542 KAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHV 601
               LHGD DQ+ R + + +FK     +L+ATDVAARGLDI SIK+V+N+D+A+D+D H 
Sbjct: 550 NLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHT 609

Query: 602 HRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRFRSKR 661
           HRIGRTGRAG+K G A+TL+T K++ FAG+LV +L  A Q+VS EL+DLAM++  FR  R
Sbjct: 610 HRIGRTGRAGEK-GVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSR 669

Query: 662 ----DARKKGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAV 721
                 +K   GGGG   + R   G G    D G             PS+  +  R   +
Sbjct: 670 FKGGKGKKPNIGGGGLGYRER--PGLGSESSDRGNNNSVMSNYEAYKPSSGAMGDR---L 729

Query: 722 NSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPANKRPTLSGFVSGGSIGGGANSPAPP 757
            +++    +Q+KS+FVAAS      GSS + +         SG+ S GS+     S A  
Sbjct: 730 TAMKAAFQSQYKSHFVAASLNNQKTGSSAAGA---------SGWTSAGSLNSVPTSSAQQ 758

[Close]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match: A0A1S3BY83 (DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo OX=3656 GN=LOC103494724 PE=3 SV=1)

HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 742/767 (96.74%), Postives = 748/767 (97.52%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK-GGGGGGKKGKSRGSNGRGVRGVDFG 660
           VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK GGGGGGKKGKSRGSNGRGVRGVDFG
Sbjct: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGKKGKSRGSNGRGVRGVDFG 660

Query: 661 LGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVP 720
           LGIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++P
Sbjct: 661 LGIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMP 720

Query: 721 ANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           ANKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 ANKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 759

[Close]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match: A0A0A0KTB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004270 PE=3 SV=1)

HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 734/768 (95.57%), Postives = 746/768 (97.14%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGN D GAGA+GAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDD+E+DPMES
Sbjct: 61  EASGNADGGAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIP+
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPS 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRP+KT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPVKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQK FK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK--GGGGGGKKGKSRGSNGRGVRGVDF 660
           VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK  GGGGGGKKGKSRGSNGRGVRGVDF
Sbjct: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKSRGSNGRGVRGVDF 660

Query: 661 GLGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSV 720
           GLGIGYNPE +GSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPP+QGSSNSY+V
Sbjct: 661 GLGIGYNPEGTGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPNQGSSNSYNV 720

Query: 721 PANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           PANKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 PANKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 760

[Close]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match: A0A5D3E1C0 (DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001530 PE=3 SV=1)

HSP 1 Score: 1382.5 bits (3577), Expect = 0.0e+00
Identity = 721/766 (94.13%), Postives = 727/766 (94.91%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSLIAAGQNVSVELMDLAM                     KGKSRGSNGRGVRGVDFGL
Sbjct: 601 VNSLIAAGQNVSVELMDLAM---------------------KGKSRGSNGRGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++PA
Sbjct: 661 GIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPA 720

Query: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           NKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 737

[Close]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match: A0A5A7TS76 (DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001520 PE=3 SV=1)

HSP 1 Score: 1378.6 bits (3567), Expect = 0.0e+00
Identity = 723/766 (94.39%), Postives = 731/766 (95.43%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSLIAAGQNVSVELMDLAMK   FR+     +         GKSRGSNGRGVRGVDFGL
Sbjct: 601 VNSLIAAGQNVSVELMDLAMK-VIFRNMLHIIR-------FIGKSRGSNGRGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++PA
Sbjct: 661 GIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPA 720

Query: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           NKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 750

[Close]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match: A0A6J1GA90 (DEAD-box ATP-dependent RNA helicase 24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452364 PE=3 SV=1)

HSP 1 Score: 1367.1 bits (3537), Expect = 0.0e+00
Identity = 713/768 (92.84%), Postives = 732/768 (95.31%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNEAE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGN D  AGA G EEEEIDPLDAFMEGIHEEM+APPPPKP EKVDKYRD+EEDDPMES
Sbjct: 61  EASGNGDNVAGAGGGEEEEIDPLDAFMEGIHEEMRAPPPPKPKEKVDKYRDEEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FL+AKKDVGLTLAADALHAGYDSDEEVYAAAKAVDA MVEYDSDDNMLI+EKKKIE IPA
Sbjct: 121 FLKAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAAMVEYDSDDNMLIVEKKKIESIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           L+HSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRK+LAIR SGFDVPRPIKT
Sbjct: 181 LEHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKNLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FED GFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSG DIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDSGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGRDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSK HGLRVSAVYGGMSKFDQ+KELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKVHGLRVSAVYGGMSKFDQIKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIK+KALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKMKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDEIESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYH LIA
Sbjct: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHALIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGD+DG+AHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDRDGKAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK-GGGGGGKKGKSR-GSNGRGVRGVDF 660
           VNSLIAAGQNVS+ELMDLAMKDGRFRSKRDARKK GGGGGGKKGK R G NGRGVRGVDF
Sbjct: 601 VNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKKGGGGGGGKKGKGRGGGNGRGVRGVDF 660

Query: 661 GLGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSV 720
           GLGIGYNPESSGS PST NVQSRSAAVNSLRTGMMAQFKS+FVAASSAPPSQGS++SYS+
Sbjct: 661 GLGIGYNPESSGSNPSTNNVQSRSAAVNSLRTGMMAQFKSSFVAASSAPPSQGSNSSYSM 720

Query: 721 PANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           PANKRPTL+GFVSGGSIGGGAN P PP  R N Y+PNA E+SSQ+NSE
Sbjct: 721 PANKRPTLAGFVSGGSIGGGANRPPPPPPRANSYVPNAGEFSSQKNSE 760

[Close]
BLAST of Lsi03G011190 vs. NCBI nr
Match: XP_008454276.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo])

HSP 1 Score: 1426.4 bits (3691), Expect = 0.0e+00
Identity = 742/767 (96.74%), Postives = 748/767 (97.52%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK-GGGGGGKKGKSRGSNGRGVRGVDFG 660
           VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK GGGGGGKKGKSRGSNGRGVRGVDFG
Sbjct: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGKKGKSRGSNGRGVRGVDFG 660

Query: 661 LGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVP 720
           LGIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++P
Sbjct: 661 LGIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMP 720

Query: 721 ANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           ANKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 ANKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 759

[Close]
BLAST of Lsi03G011190 vs. NCBI nr
Match: XP_038904641.1 (DEAD-box ATP-dependent RNA helicase 24 [Benincasa hispida])

HSP 1 Score: 1417.1 bits (3667), Expect = 0.0e+00
Identity = 737/768 (95.96%), Postives = 745/768 (97.01%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN AE
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDAE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGND  G G AGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEE+DPMES
Sbjct: 61  EASGNDGGGGGGAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEEDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKA+TMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKAVTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMP KVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPCKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGG-GGGKKGKSRGSNGRGVRGVDFG 660
           V+SLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGG GGGKKGKSRGSNGRGVRGVDFG
Sbjct: 601 VHSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGVGGGKKGKSRGSNGRGVRGVDFG 660

Query: 661 LGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVP 720
           LGIGYNPESSGS+PSTTNVQSRSAAVNSLRTGMMAQFKSNFVAAS+ PPSQGSSNSYSVP
Sbjct: 661 LGIGYNPESSGSSPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASTGPPSQGSSNSYSVP 720

Query: 721 ANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSER 768
            NKRPTLSGFVSGGSIGGGANSP PPVSRVN YMPN VEYSSQ+NSER
Sbjct: 721 TNKRPTLSGFVSGGSIGGGANSPVPPVSRVNSYMPNTVEYSSQKNSER 760

[Close]
BLAST of Lsi03G011190 vs. NCBI nr
Match: XP_004152219.1 (DEAD-box ATP-dependent RNA helicase 24 [Cucumis sativus] >KGN52865.1 hypothetical protein Csa_014964 [Cucumis sativus])

HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 734/768 (95.57%), Postives = 746/768 (97.14%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGN D GAGA+GAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDD+E+DPMES
Sbjct: 61  EASGNADGGAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIP+
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPS 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRP+KT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPVKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQK FK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK--GGGGGGKKGKSRGSNGRGVRGVDF 660
           VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKK  GGGGGGKKGKSRGSNGRGVRGVDF
Sbjct: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGGGKKGKSRGSNGRGVRGVDF 660

Query: 661 GLGIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSV 720
           GLGIGYNPE +GSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPP+QGSSNSY+V
Sbjct: 661 GLGIGYNPEGTGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPNQGSSNSYNV 720

Query: 721 PANKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           PANKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 PANKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 760

[Close]
BLAST of Lsi03G011190 vs. NCBI nr
Match: TYK29548.1 (DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo var. makuwa])

HSP 1 Score: 1382.5 bits (3577), Expect = 0.0e+00
Identity = 721/766 (94.13%), Postives = 727/766 (94.91%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSLIAAGQNVSVELMDLAM                     KGKSRGSNGRGVRGVDFGL
Sbjct: 601 VNSLIAAGQNVSVELMDLAM---------------------KGKSRGSNGRGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++PA
Sbjct: 661 GIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPA 720

Query: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           NKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 737

[Close]
BLAST of Lsi03G011190 vs. NCBI nr
Match: KAA0044421.1 (DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo var. makuwa])

HSP 1 Score: 1378.6 bits (3567), Expect = 0.0e+00
Identity = 723/766 (94.39%), Postives = 731/766 (95.43%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDN  E
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNDGE 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           EASGNDD GAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKP EKVDKYRDDEEDDPMES
Sbjct: 61  EASGNDDGGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDEEDDPMES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLI+EKKKIEPIPA
Sbjct: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEPFNKDFYEEKASIS        GMSEEEVSEYRKSLAIR SGFDVPRPIKT
Sbjct: 181 LDHSSIDYEPFNKDFYEEKASIS--------GMSEEEVSEYRKSLAIRVSGFDVPRPIKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK
Sbjct: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE
Sbjct: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MIDDGDVLVFASKKATVDE+ESQLLQKGFK AALHGDKDQASRMETLQKFKSGVYHVLIA
Sbjct: 481 MIDDGDVLVFASKKATVDEVESQLLQKGFKVAALHGDKDQASRMETLQKFKSGVYHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL
Sbjct: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSLIAAGQNVSVELMDLAMK   FR+     +         GKSRGSNGRGVRGVDFGL
Sbjct: 601 VNSLIAAGQNVSVELMDLAMK-VIFRNMLHIIR-------FIGKSRGSNGRGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIGYNPE SGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSY++PA
Sbjct: 661 GIGYNPEGSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYNMPA 720

Query: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRVNPYMPNAVEYSSQQNSE 767
           NKRPTLSGFVSGGSIGGGANSPAPPVSR N YMPN VEYSSQ+N+E
Sbjct: 721 NKRPTLSGFVSGGSIGGGANSPAPPVSRGNSYMPNPVEYSSQKNTE 750

[Close]
BLAST of Lsi03G011190 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 574/767 (74.84%), Postives = 658/767 (85.79%), Query Frame = 0 

Query: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSRGHGHDNYEDTDVDNIEYDDNGAE 60
           MS RKFG EGFGINRQT+Y+FERSQAPQRLYVPPSSR  G DN ED D+DNI+Y +N   
Sbjct: 1   MSNRKFGMEGFGINRQTSYSFERSQAPQRLYVPPSSR--GGDNSEDADLDNIDYMENEEA 60

Query: 61  EASGNDDVGAGAAGAEEEEIDPLDAFMEGIHEEMKAPPPPKPNEKVDKYRDDEEDDPMES 120
           E    +   A A+G E +EIDPLDAFMEGIH+EMK+ PPPKP EK+++Y+DD +DDP+ES
Sbjct: 61  EEDIEEGGSAAASGGEVDEIDPLDAFMEGIHQEMKSAPPPKPKEKLERYKDD-DDDPVES 120

Query: 121 FLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPA 180
           +L+AKKD+GLTLAADAL+AGY+SDEEVYAAAKAVDAGM++YDSDDN ++++K+KIEPI A
Sbjct: 121 YLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIEPITA 180

Query: 181 LDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKT 240
           LDHSSIDYEP NKDFYEE  SIS        GM+E+E ++YR+ L IR SGFDV RP+KT
Sbjct: 181 LDHSSIDYEPINKDFYEELESIS--------GMTEQETTDYRQRLGIRVSGFDVHRPVKT 240

Query: 241 FEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVH 300
           FEDCGFS Q+M+AIKKQ YEKPT+IQCQA+PIVLSG D+IGIAKTGSGKTAAFVLPMIVH
Sbjct: 241 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 300

Query: 301 IMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELK 360
           IMDQPEL+++EGPIGVICAPTRELAHQI+LE KKFSKA+GLRVSAVYGGMSK +Q KELK
Sbjct: 301 IMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELK 360

Query: 361 AGCEIVVATPGRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 420
           AGCEIVVATPGRLIDM+K+KALTM +A+YLVLDEADRMFDLGFEPQ+RSIVGQIRPDRQT
Sbjct: 361 AGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 420

Query: 421 LLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPE 480
           LLFSATMP KVEKLAREIL+DP+RVTVGEVGMANEDITQVV+V+PSD EKLPWLLEKLP 
Sbjct: 421 LLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPG 480

Query: 481 MIDDGDVLVFASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIA 540
           MID+GDVLVFASKKATVDEIE+QL    FK AALHGDKDQASRMETLQKFKSGV+HVLIA
Sbjct: 481 MIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIA 540

Query: 541 TDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGEL 600
           TDVAARGLDIKS+K+VVN+DIAKDMDMHVHRIGRTGRAGD+DG A+TL+TQ+EARFAGEL
Sbjct: 541 TDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGEL 600

Query: 601 VNSLIAAGQNVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGL 660
           VNSL+AAGQNV  EL DLAMKDGRF+SKRD RK     GGKKG+  G   +GVRGVDFGL
Sbjct: 601 VNSLVAAGQNVPPELTDLAMKDGRFKSKRDGRK-----GGKKGRGGGGGNKGVRGVDFGL 660

Query: 661 GIGYNPESSGSTPSTTNVQSRSAAVNSLRTGMMAQFKSNFVAASSAPPSQGSSNSYSVPA 720
           GIG++ ESS  TPS+    SRS A+NS+RTG+MAQFK++FVAA+   PS   + +Y    
Sbjct: 661 GIGFSSESS-RTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAAT---PSNPQNQAY---P 720

Query: 721 NKRPTLSGFVSGGSIGGG---ANSPAPPVSRVNPYMPNAVEYSSQQN 765
           NKRP+L GFVSGG+IGG      S APPV+       NA  ++S QN
Sbjct: 721 NKRPSLMGFVSGGTIGGDMGRTQSQAPPVAPTQ----NASSHNSSQN 740

[Close]
BLAST of Lsi03G011190 vs. TAIR 10
Match: AT1G20920.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 3.1e-118
Identity = 277/677 (40.92%), Postives = 383/677 (56.57%), Query Frame = 0 

Query: 42  DNYEDTDVDNIEYDDNGAEEASGNDDVGAGAAGAEEEEIDPLDAFME-----GIHEEMKA 101
           +N  D  + ++E +       SG D         +EEEIDPLDAFM       + +    
Sbjct: 10  ENDGDAKMVDLENETAATVSESGGD------GAVDEEEIDPLDAFMNTMVLPEVEKFCNG 69

Query: 102 PPPPKPNEKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDA 161
            PPP  N+       D + +  ES  R KK  G   A   +  G DSD + Y+  K  D 
Sbjct: 70  APPPAVNDGT----LDSKMNGKESGDRPKK--GFNKALGRIIQGEDSDSD-YSEPKNDDD 129

Query: 162 GMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEE 221
             ++ D ++ M  ++K K E +  +DHS I+YEPF K+FY E   IS         M++E
Sbjct: 130 PSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDIS--------RMTQE 189

Query: 222 EVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSG 281
           EV+ YRK L ++  G DVPRPIK +   G + ++++ +KK  YEKP  IQ QA+PI++SG
Sbjct: 190 EVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSG 249

Query: 282 GDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFS 341
            D IG+AKTGSGKT  FVLPM+ HI DQP +E  +GPIG++ APTREL  QI+ + +KFS
Sbjct: 250 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFS 309

Query: 342 KAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMI---KLKALTMSKATYLVLD 401
           K  G+R   VYGG     Q+ ELK G EIVV TPGR+ID++     K   + + T+LV+D
Sbjct: 310 KPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMD 369

Query: 402 EADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMA 461
           EADRMFD+GFEPQI  I+  IRP+RQT+LFSAT PR+VE LAR++L  PV + VG   + 
Sbjct: 370 EADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 429

Query: 462 NEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGFKAAA 521
           N+DITQ+V V P + ++   LLE L E  + G +LVF   +   D +   +++  +   +
Sbjct: 430 NKDITQLVEVRP-ESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLS 489

Query: 522 LHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIG 581
           LHG KDQ  R  T+  FK+ V ++LIAT VAARGLD+K ++ VVNFD     + +VHR+G
Sbjct: 490 LHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 549

Query: 582 RTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRF----RSKR 641
           RTGRAG K G A T I++ +A++A +LV +L  + Q V  +L  LA  DG      +   
Sbjct: 550 RTGRAGRK-GCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA--DGFMVKVKQGIE 609

Query: 642 DARKKGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAVNSLR 701
            A   G GG G K        R           G+  + S S      V+       S +
Sbjct: 610 QAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQ 661

Query: 702 TGMMAQFKSNFVAASSA 707
               AQ  +   AA +A
Sbjct: 670 QATFAQIAAIAAAAKAA 661

[Close]
BLAST of Lsi03G011190 vs. TAIR 10
Match: AT1G20920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 423.3 bits (1087), Expect = 4.1e-118
Identity = 280/690 (40.58%), Postives = 386/690 (55.94%), Query Frame = 0 

Query: 38  GHGHDNYE-DTDVDNIEYDDNGAE--------EASGNDDVGAGAAGAEEEEIDPLDAFME 97
           GH  +  E + DVD     +N  +        E +       G    +EEEIDPLDAFM 
Sbjct: 329 GHPEEKSETEMDVDEETKPENDGDAKMVDLENETAATVSESGGDGAVDEEEIDPLDAFMN 388

Query: 98  -----GIHEEMKAPPPPKPNEKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALHAGYDS 157
                 + +     PPP  N+       D + +  ES  R KK  G   A   +  G DS
Sbjct: 389 TMVLPEVEKFCNGAPPPAVNDGT----LDSKMNGKESGDRPKK--GFNKALGRIIQGEDS 448

Query: 158 DEEVYAAAKAVDAGMVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASIS 217
           D + Y+  K  D   ++ D ++ M  ++K K E +  +DHS I+YEPF K+FY E   IS
Sbjct: 449 DSD-YSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDIS 508

Query: 218 GHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPT 277
                    M++EEV+ YRK L ++  G DVPRPIK +   G + ++++ +KK  YEKP 
Sbjct: 509 --------RMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPM 568

Query: 278 SIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRE 337
            IQ QA+PI++SG D IG+AKTGSGKT  FVLPM+ HI DQP +E  +GPIG++ APTRE
Sbjct: 569 PIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRE 628

Query: 338 LAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMI---KLK 397
           L  QI+ + +KFSK  G+R   VYGG     Q+ ELK G EIVV TPGR+ID++     K
Sbjct: 629 LVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 688

Query: 398 ALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILT 457
              + + T+LV+DEADRMFD+GFEPQI  I+  IRP+RQT+LFSAT PR+VE LAR++L 
Sbjct: 689 ITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLN 748

Query: 458 DPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEI 517
            PV + VG   + N+DITQ+V V P + ++   LLE L E  + G +LVF   +   D +
Sbjct: 749 KPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLRLLELLGEWSEKGKILVFVQSQEKCDAL 808

Query: 518 ESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFD 577
              +++  +   +LHG KDQ  R  T+  FK+ V ++LIAT VAARGLD+K ++ VVNFD
Sbjct: 809 YRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFD 868

Query: 578 IAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAM 637
                + +VHR+GRTGRAG K G A T I++ +A++A +LV +L  + Q V  +L  LA 
Sbjct: 869 APNHYEDYVHRVGRTGRAGRK-GCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA- 928

Query: 638 KDGRF----RSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTT 697
            DG      +    A   G GG G K        R           G+  + S S     
Sbjct: 929 -DGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDEND 988

Query: 698 NVQSRSAAVNSLRTGMMAQFKSNFVAASSA 707
            V+       S +    AQ  +   AA +A
Sbjct: 989 VVRKAGGGEISQQQATFAQIAAIAAAAKAA 999

[Close]
BLAST of Lsi03G011190 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 401.0 bits (1029), Expect = 2.2e-111
Identity = 223/470 (47.45%), Postives = 296/470 (62.98%), Query Frame = 0 

Query: 191 FNKDFYEEKASISGHLLVGTYGMSEEEVSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQL 250
           F K+FY E  ++          M+E++V+ YR    I   G DVP+P+K F+D  F   +
Sbjct: 125 FEKNFYVESPTVQ--------AMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNI 184

Query: 251 MNAIKKQGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE 310
           + AI K G+ +PT IQ Q  P+ L G D+IGIA+TGSGKT A++LP +VH+  QP L ++
Sbjct: 185 LEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD 244

Query: 311 EGPIGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATP 370
           +GPI +I APTRELA QI  E +KF    G+R + +YGG  K  Q+++L+ G EIV+ATP
Sbjct: 245 DGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATP 304

Query: 371 GRLIDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRK 430
           GRLIDM++ +   + + TYLVLDEADRM D+GFEPQIR IV QIRPDRQTLL+SAT PR+
Sbjct: 305 GRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPRE 364

Query: 431 VEKLAREILTDPVRVTVGEVGM-ANEDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLV 490
           VE LAR+ L DP +  +G   + AN+ I QV+ ++P+  EK   LL  L +++D   +L+
Sbjct: 365 VETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTP-EKYNRLLTLLKQLMDGSKILI 424

Query: 491 FASKKATVDEIESQLLQKGFKAAALHGDKDQASRMETLQKFKSGVYHVLIATDVAARGLD 550
           F   K   D++  QL   G+ A A+HGDK Q+ R   L +FKSG   ++ ATDVAARGLD
Sbjct: 425 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 484

Query: 551 IKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQ 610
           +K IK VVN+D    ++ ++HRIGRTGRAG K G A T  T   A+FA ELV  L  AGQ
Sbjct: 485 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAK-GMAFTFFTHDNAKFARELVKILQEAGQ 544

Query: 611 NVSVELMDLAMKDGRFRSKRDARKKGGGGGGKKGKSRGSNGRGVRGVDFG 660
            V   L  L    G           GG GGG+  + RG    G RG  FG
Sbjct: 545 VVPPTLSALVRSSG--------SGYGGSGGGRNFRPRG----GGRGGGFG 572

[Close]
BLAST of Lsi03G011190 vs. TAIR 10
Match: AT3G09620.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 387.1 bits (993), Expect = 3.3e-107
Identity = 274/678 (40.41%), Postives = 377/678 (55.60%), Query Frame = 0 

Query: 46  DTDVDNIEYDDNGAEE---ASGNDDV-----GAGAAGAEEEEIDPLDAFMEGIHEEMKAP 105
           + DVD     +NG +    AS N+         G   A+E+EIDPLDAFM      M  P
Sbjct: 209 EMDVDRDTKLENGGDAKMVASENETAVTVSENGGDRAADEDEIDPLDAFM----NTMVLP 268

Query: 106 PPPKPNEKVDKYRDDEEDDPMESFLRAKKDVGLTLAADALHAGYDSDEEVYAAAKAVDAG 165
              K +  V     D + +  E+  +AKK      A   +  G DSD + Y+  K+ D  
Sbjct: 269 EVEKLSNIVIDGILDFKMNGKETGDQAKKGFN-KAALGRIIQGEDSDSD-YSEPKSDDDP 328

Query: 166 MVEYDSDDNMLIIEKKKIEPIPALDHSSIDYEPFNKDFYEEKASISGHLLVGTYGMSEEE 225
            ++ D ++ M  ++K K E +  +DHS I+YEPF K+FY E   IS         M+++ 
Sbjct: 329 SLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDIS--------RMTQDA 388

Query: 226 VSEYRKSLAIRASGFDVPRPIKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGG 285
           V+ YRK L ++  G DVPRPI+ +   G + ++++ +KK  YEKP  IQ QA+PI++SG 
Sbjct: 389 VNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGR 448

Query: 286 DIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKFSK 345
           D IG+AKTGSGKT  FVLPM+ HI DQP +E  +GPIG++ APTREL  QIY + +KFSK
Sbjct: 449 DCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSK 508

Query: 346 AHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMI---KLKALTMSKATYLVLDE 405
           A G+    VYGG     Q+ ELK G EIVV TPGR+ID++     K   + + TYLV+DE
Sbjct: 509 ALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDE 568

Query: 406 ADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMAN 465
           ADRMFD+GFEPQI  IV  IRPDRQT+LFSAT PR+VE LAR++L  PV + VG   + N
Sbjct: 569 ADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN 628

Query: 466 EDITQVVHVLPSDLEKLPWLLEKLPEMIDDGDVLVFASKKATVDEIESQLLQKGFKAAAL 525
           +DITQ+V + P + E+   LLE L E  + G VLVF                        
Sbjct: 629 KDITQLVEIRP-ESERFSRLLELLGEWYEKGKVLVFV----------------------- 688

Query: 526 HGDKDQASRMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGR 585
                  S+ +++  FKS V ++LIAT VAARGLD+K ++ VVNFD     + +VHR+GR
Sbjct: 689 ------RSQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGR 748

Query: 586 TGRAGDKDGRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKDGRFRSK-----R 645
           TGRAG K G A T I++ +A++A +LV +L  + Q V  ++   A+ +G F +K      
Sbjct: 749 TGRAGRK-GCAVTFISEDDAKYAPDLVKALELSEQPVPDDVK--AVAEG-FMAKVKQGIE 808

Query: 646 DARKKGGGGGGKKGKSRGSNGRGVRGVDFGLGIGYNPESSGSTPSTTNVQSRSAAVNSLR 705
            A   G GG G K        R           G+  E S S      V+     ++  +
Sbjct: 809 QAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQQ 837

Query: 706 TGMMAQFKSNFVAASSAP 708
              +AQ  +   AAS AP
Sbjct: 869 I-TLAQIAAIASAASKAP 837

The following BLAST results are available for this feature:
BLAST of Lsi03G011190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O229070.0e+0074.84DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 P... [more]
Q10MH81.0e-29972.83DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q810A72.7e-14641.66ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3[more]
Q86XP36.6e-14541.66ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1[more]
Q5F4852.5e-14441.72ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1[more]
BLAST of Lsi03G011190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BY830.0e+0096.74DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo OX=3656 GN=LOC103494724 P... [more]
A0A0A0KTB50.0e+0095.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004270 PE=3 SV=1[more]
A0A5D3E1C00.0e+0094.13DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7TS760.0e+0094.39DEAD-box ATP-dependent RNA helicase 24 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1GA900.0e+0092.84DEAD-box ATP-dependent RNA helicase 24 isoform X2 OS=Cucurbita moschata OX=3662 ... [more]
BLAST of Lsi03G011190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008454276.10.0e+0096.74PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo][more]
XP_038904641.10.0e+0095.96DEAD-box ATP-dependent RNA helicase 24 [Benincasa hispida][more]
XP_004152219.10.0e+0095.57DEAD-box ATP-dependent RNA helicase 24 [Cucumis sativus] >KGN52865.1 hypothetica... [more]
TYK29548.10.0e+0094.13DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo var. makuwa][more]
KAA0044421.10.0e+0094.39DEAD-box ATP-dependent RNA helicase 24 [Cucumis melo var. makuwa][more]
BLAST of Lsi03G011190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47330.10.0e+0074.84P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT1G20920.23.1e-11840.92P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT1G20920.14.1e-11840.58P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT5G63120.22.2e-11147.45P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT3G09620.13.3e-10740.41P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 498..579
e-value: 8.4E-31
score: 118.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 475..579
e-value: 6.4E-27
score: 94.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 470..619
score: 21.762375
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 258..460
e-value: 1.3E-64
score: 230.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 270..445
score: 32.967678
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 263..434
e-value: 3.5E-52
score: 176.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 447..623
e-value: 1.1E-46
score: 160.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 209..446
e-value: 3.4E-89
score: 300.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 385..614
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 222..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 624..684
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 665..684
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..768
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..728
NoneNo IPR availablePANTHERPTHR47958:SF47DEAD-BOX ATP-DEPENDENT RNA HELICASE 24coord: 46..669
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 46..669
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 457..589
e-value: 8.25368E-51
score: 171.921
NoneNo IPR availableCDDcd17952DEADc_DDX42coord: 250..446
e-value: 4.64126E-130
score: 382.918
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 391..399
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 239..267
score: 12.623852

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G011190.1Lsi03G011190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003724 RNA helicase activity