Lsi03G011170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G011170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr03: 21354666 .. 21359327 (-)
RNA-Seq Expression	Lsi03G011170
Synteny	Lsi03G011170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGAGGTCACTGCCATCAAATTACTTGCTCGACCCATCTTCTCCTTCTCTATCTTCGCCGTCGTTGGCTTCTTCAAGCGGATAAGGCCTCTCCGACTTTGCTAATTCTCCGCACTTCCACTTCCTTCTTCCTCTATTGCTTTCTGCTGAGATTTTTCGGAACCTTTACCTGCGAAAATGGCCCATACTTTCGCCTATACATCTGCCTCGTCTTTCCGATTAAACTCCCTCGTTTCTGTACCGAATTCAAGCTCTTCTTCCGACTCCCAGAAGCTATTTCTTCCCTTGGAGCCTTTTCACTCGAGGTACTTCTCCTGGCCTGTCTTCGTTTTTTTCTGTTTCTATGCAATGTTGGTAGTATTTGGGTAGTTCGTTTGAATGTCAAAGATTGTGAATGTGTGGGCGTCGTTGGTGACACTGAAATGGATTGCCTGAATTGGTCTATTTTTTAGTTGAAGTTCGAAATTGAAAGGTTTTGATGTCCAGATGGATTTGGGTATTTGGAAATTACTAGTGCCAAGAGCACGCCCTAGGTGATTTTTGATGGTCGGTGAGATTGGGAAAATGTAGTTTTGTTTTTTAACCTCAATTCTGCTACCATGTTACACTTCTGGGGATAGACTTCAACTAAAATCCCTATCTTTGGTTCTTATTATATGTTGTATAAGTTTAGTCTTCTCTTGTTTGTCTATAAATTTTAATTGTAGCAGCATCGAGTGATGTCCTCACTATTTGCAGGAAACTCGGAAAATTAGTTGGAGGTGGAAGAAACCTCAAGAACACACCAGTCAAAGCCATCTACTCGGGCGAGTTCTCATCACTGGATAGGAATTCTCGCCAAGGAATATGGTCTATAAGGTGCATAGATTGACTAACTGGGAGTTCCCCATACGTACTTTTGGGGCCAAAGATGGCTATAATCATGATCAGTTATTGAAATGCTAAACATAGAAATGGCTTTTGAAATTATGTTCTGTATGATTCACAGGGATGATGTGCAAATTCCATCTTCACCATACTTCCCAGCTTATGCACAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAACGCTTCCAAAGTGTTATAAGCCAGCTTTTTCAATATGTAAGGGTGTAGGTCTGCGATGTTTATTTCCTTGACATAGGTTTGATGTTGCACTTGTAGGTTGTTATCACCATCTTTTGATACTTTTGTGTGCTTTTGGACTAGAGAATTATTCGTTGTGGTGGAGCCGTTGATGATGATATGGCAAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGTTCTTTTTTTCTTTTTGCTCTCAACTCATTTTAAGGAAGTAGCTCATATATAGTTTATCACGTTTTCAGTATAACTAATTGATTAACATAATACTTTTGGTATGCTTAACAGGATATTGTGATGTATGTAAATTCCCCTGGTGGATCAGTTACAGCTGGTAATATTGAAAGCGGAAACGATTTCATTGATCATTTGTTTTGTTGGAAATTGGTACTGGCTTTATCTTTTCACTACTGATTAATTTGGATTTATGTAGGTATGGCCATTTTTGACACTATGAGACATATTAGACCCGATGTCTCTACTGTCTGTGTGGGACTAGCAGCCAGGTATAAGATTTATCGGTTCCATACACTTTTAAGCTGATTTGTTTTGCTTTTCTTCTTTTATTTCTTCAAGTGTCATTTACAATTAGTGTGGCATTGTTAAACTGTGCTGGGAAAAATTATTATCTAAAATAGTGGCAGATGACTTCTTCTTGGTTCCAATCATCATCTTTATCCTATAATGGACTAGTTATATGGCCTGCATAATGCGTATAATTTTGTAAAGGCTGGAGCCTTCATTATTGTTTTCCCTCCAGAGAGGCAGATTAATTAAAATGGATCGACTTCAGCTAGTCCAAATGTTTCAGCTGTAGTTTGGCCTTATATCATTAGCACACATATCTGTATTCAAAATCAATGAGATAATGCATGAACAGGTCCAAGTGGTGTTGGTAGGCTCAAAACTTGGTGTTTTAGCATGCCACCTTAATTTATTGAAGACTAAACTGGTAAAATATGTGTATGTTTGTGTGTATTCACAATGCTTCAAAGCCTGGCGCTGATGCAAGTAACATGGACTCAATTTTTCTTGTGCACTTGAATCAATAGCTTAGGAGAGATAAAATTGGGGTATCAATGACTAGGAGGAGTTTTCCTAACCTAGAGCTGTTATCTGTAACTTCTCCCTCTCATATTTTAATTAATAGTTTGTTCTTACATTGGGATTTCTGTTTGTTCTATTATTAACAGTATGGGAGCTTTCCTGCTTAGCGCTGGAACTAAAGGTACAAGTTTTTAGTGTTAACAACTTCTTGAATTTTGTTTTTGTTGTTTTCTTAAATTAAATATTTTGCTTATAAAAAATAAATGATGTATTTTGCTGTGTATTAAGTCTGCACCTTCTTGTTTATTTCTAAAGGAAAAAGATACAGTTTGCCAAATTCAAGGATAATGATCCATCAGCCTCTCGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGTATCCTTATAAATCCTCTTGGATGATCAGTAATATATCAATCAAATTCGTTTTATGATTTATGTAGTTTCCTTTGATTGCATATCTATCATCAAGGTATTTCATAGTAGAGCTTTGTGGGTGAGTTTGGTAACTCATATGAAATAAGCGTTTGTTAAAAAGGAAAAACGTTTTTTTATTGAAAGTGCTTACGAAATTTGAAAAGCGTATAATAGACCACTTCACTAGTTGGTTCTAATGTTTCAAAATGGCTTTTCATCTAATCTTTTTAATTCATCTTAATGTAAAATATTAATATATACTTAAAAAATGATTTTAGAATTGACAAAGTACTGAAAAAGAAAACAACAAAACCAAAAGGAAAAAAAGTAAAGTGAGAAAGCATTTGTAGATGAAAGTCTGGGTAAATAGACAATAGTGAAGGAGTGTATAAAGAGAGATTAATTGAACAAAAATGCGTATGGAGGGAGAACATAGGGAAAAAAGTGTAGGTCAAAAGTTGTTGAGAAAAGGCATATATTTAGGAAGAAGCTAGAGAGAGGATTTCTATGGGGAGAAATTAATGATAATGTAGGTGTTAGGAAAGACTAGGTAGAGAGTGTAGAGTGAAATAAGTGAGTAAGAGTAAAGAAAATCCGGTGAGAGAAAGTATAGTTGTAGATGGAGATAAAACGAGAGAAAATGTGTTAAAGGAGAGCTAAGTTTGAGAAGAGTGCAAAGAGAGATTAGTTAGGTAAGGATGCAGTGAGAGAAAGTGTGTTTGAATTCTATGTGTTTGGGTCACCTTGCGCTACCCAACTAACCTCACAGGATAACTGCTTAATTCTACAACATTTGATTGTTAAAAAATGTGCAAGAATTTAAAACCCTTGGGTTTGAATCTCCAACCTATGGTTGTTGAGTTGTTTCACTCTGTTTAAAGCTAAGAAATTCCAACTAGCACCACTTACTCACACCTTACAAATGTCATGACGCTCAAAATTGATCATGCCTCTAACTTGTGCAACTGGAGGATTTTTGCCCAATGTTATCGACCCTCCAGGTTGATAGATTTAACAATTTTTGGCAATGTTGCAATTGATCCACACTAGCCCAGTCAAGTTTGTTGAGCTGGGTATCATTTGCTAAACCTTCAAGAAAATGAAAACTTTTATGTCCACCTTGAACAATTTTTTGGCAGGAGAATTTAGATTGCTTTTCCTTCAACAATTGTAGCAGGAATGTGTTATTGCCTTAGATTATGATTTCATCCATGTTAATGTCAAGCATTTTCAATTTAGTCCCTAAACTGTAACTTGGTTGTCAGGCAAATGAAATGTTGCATCATAAGGCAAATCTTAACGGGTATCTTTCGTACCACACCGGTCAAAGTCTTGAGAAAATTAACCAGGATACGGATCGCGATTTCTTCATGAGTGCTAAAGAAGCTAAAGAGTATGGACTCATAGATGGAGTTATAATGAATCCTCTCAAAGCTCTTCAACCTTTAGCAGCTGCCACAGAAGGCAGTGCGTAAAATTGTATCCTGCTGTGCAACCAATTAGATATTCTTCTTGTAGATTTAAAAGCGAAAACCATCGTAGTGTATGCAGATTTTGACCATTAACAAACATGGCTTCCATGCTCTCATCGTAGCTTAAGCTTGAGAGAAATCTTGAAATGGCCATTGGATTACTGTTGTTTCCTTACACCACCAAGATATTATATTGAACCGTCCATTAAAGTTACTGTCCTGATTAAAAGAAATTTCCTCTCTGGTTGGTTGGGATGACAAGAATGATACTGGCCAAACACTTGTCAATATTTGATTGGTTATTGTGAAAAGATGCCGCCGACCCTATAAAAGACTGCATTATTATGTAGTCACTTTCTTGATTGTGGATTAATATGCGTTAGGTTTCATTGAGAATTTCTAATGCATTCAGTAGCTTTCCATATACGTTGCAAGGAGGTGAACCTTGGTTGTTTCTGATATTTTAGTGTTTTATTATTCAATGGAGTTGTTACATTATGGATATGTTTCTTAAGAAATTTGGCACTGAACTAGCATTATTAGTCATTATTGATGATGTTTTCCATTTTGT

mRNA sequence

CACAGAGGTCACTGCCATCAAATTACTTGCTCGACCCATCTTCTCCTTCTCTATCTTCGCCGTCGTTGGCTTCTTCAAGCGGATAAGGCCTCTCCGACTTTGCTAATTCTCCGCACTTCCACTTCCTTCTTCCTCTATTGCTTTCTGCTGAGATTTTTCGGAACCTTTACCTGCGAAAATGGCCCATACTTTCGCCTATACATCTGCCTCGTCTTTCCGATTAAACTCCCTCGTTTCTGTACCGAATTCAAGCTCTTCTTCCGACTCCCAGAAGCTATTTCTTCCCTTGGAGCCTTTTCACTCGAGGAAACTCGGAAAATTAGTTGGAGGTGGAAGAAACCTCAAGAACACACCAGTCAAAGCCATCTACTCGGGCGAGTTCTCATCACTGGATAGGAATTCTCGCCAAGGAATATGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTCCCAGCTTATGCACAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAACGCTTCCAAAGTGTTATAAGCCAGCTTTTTCAATATAGAATTATTCGTTGTGGTGGAGCCGTTGATGATGATATGGCAAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATTGTGATGTATGTAAATTCCCCTGGTGGATCAGTTACAGCTGGTATGGCCATTTTTGACACTATGAGACATATTAGACCCGATGTCTCTACTGTCTGTGTGGGACTAGCAGCCAGTATGGGAGCTTTCCTGCTTAGCGCTGGAACTAAAGGAAAAAGATACAGTTTGCCAAATTCAAGGATAATGATCCATCAGCCTCTCGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGCATCATAAGGCAAATCTTAACGGGTATCTTTCGTACCACACCGGTCAAAGTCTTGAGAAAATTAACCAGGATACGGATCGCGATTTCTTCATGAGTGCTAAAGAAGCTAAAGAGTATGGACTCATAGATGGAGTTATAATGAATCCTCTCAAAGCTCTTCAACCTTTAGCAGCTGCCACAGAAGGCAGTGCGTAAAATTGTATCCTGCTGTGCAACCAATTAGATATTCTTCTTGTAGATTTAAAAGCGAAAACCATCGTAGTGTATGCAGATTTTGACCATTAACAAACATGGCTTCCATGCTCTCATCGTAGCTTAAGCTTGAGAGAAATCTTGAAATGGCCATTGGATTACTGTTGTTTCCTTACACCACCAAGATATTATATTGAACCGTCCATTAAAGTTACTGTCCTGATTAAAAGAAATTTCCTCTCTGGTTGGTTGGGATGACAAGAATGATACTGGCCAAACACTTGTCAATATTTGATTGGTTATTGTGAAAAGATGCCGCCGACCCTATAAAAGACTGCATTATTATGTAGTCACTTTCTTGATTGTGGATTAATATGCGTTAGGTTTCATTGAGAATTTCTAATGCATTCAGTAGCTTTCCATATACGTTGCAAGGAGGTGAACCTTGGTTGTTTCTGATATTTTAGTGTTTTATTATTCAATGGAGTTGTTACATTATGGATATGTTTCTTAAGAAATTTGGCACTGAACTAGCATTATTAGTCATTATTGATGATGTTTTCCATTTTGT

Coding sequence (CDS)

ATGGCCCATACTTTCGCCTATACATCTGCCTCGTCTTTCCGATTAAACTCCCTCGTTTCTGTACCGAATTCAAGCTCTTCTTCCGACTCCCAGAAGCTATTTCTTCCCTTGGAGCCTTTTCACTCGAGGAAACTCGGAAAATTAGTTGGAGGTGGAAGAAACCTCAAGAACACACCAGTCAAAGCCATCTACTCGGGCGAGTTCTCATCACTGGATAGGAATTCTCGCCAAGGAATATGGTCTATAAGGGATGATGTGCAAATTCCATCTTCACCATACTTCCCAGCTTATGCACAAGGGCAAGGTCCTCCTCCAATGGTGCAGGAACGCTTCCAAAGTGTTATAAGCCAGCTTTTTCAATATAGAATTATTCGTTGTGGTGGAGCCGTTGATGATGATATGGCAAATATCATTGTTGCTCAACTTCTATACCTTGATGCTGTTGATCCCAATAAGGATATTGTGATGTATGTAAATTCCCCTGGTGGATCAGTTACAGCTGGTATGGCCATTTTTGACACTATGAGACATATTAGACCCGATGTCTCTACTGTCTGTGTGGGACTAGCAGCCAGTATGGGAGCTTTCCTGCTTAGCGCTGGAACTAAAGGAAAAAGATACAGTTTGCCAAATTCAAGGATAATGATCCATCAGCCTCTCGGTGGTGCTCAGGGTGGACAGACTGACATTGATATTCAGGCAAATGAAATGTTGCATCATAAGGCAAATCTTAACGGGTATCTTTCGTACCACACCGGTCAAAGTCTTGAGAAAATTAACCAGGATACGGATCGCGATTTCTTCATGAGTGCTAAAGAAGCTAAAGAGTATGGACTCATAGATGGAGTTATAATGAATCCTCTCAAAGCTCTTCAACCTTTAGCAGCTGCCACAGAAGGCAGTGCGTAA

Protein sequence

MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPVKAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAATEGSA

Homology

[Close]

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot
Match: Q9S834 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 5.2e-138
Identity = 251/298 (84.23%), Postives = 263/298 (88.26%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNS-LVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTP 60
           MAH    TSASS R  +  VS   + SS DS KL LP EP  SRK  KLV   +N KN+ 
Sbjct: 1   MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60

Query: 61  VKAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLF 120
            KA+YSG   + +  S QG+WSIRDD+Q+PSSPYFPAYAQGQGPPPMVQERFQS+ISQLF
Sbjct: 61  PKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLF 120

Query: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180
           QYRIIRCGGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIR
Sbjct: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180

Query: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240
           PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH
Sbjct: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240

Query: 241 HKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           HKANLNGYL+YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
Sbjct: 241 HKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298

[Close]

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot
Match: Q3MFR5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66
Identity = 126/191 (65.97%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 109 ERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAG 168
           ER   + S+L + RII  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAG
Sbjct: 14  ERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAG 73

Query: 169 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 228
           M IFDTM+HIRPDV T+C GLAASMGAFLLSAGTKGKR SLP+SRIMIHQPLGGAQG  T
Sbjct: 74  MGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQAT 133

Query: 229 DIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPL 288
           DI+IQA E+L+HK  LN YL+ HTGQ +E+I +DT+RDFFMS  EA++YGLID VI    
Sbjct: 134 DIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHA 193

Query: 289 KALQPLAAATE 300
              +P+A   +
Sbjct: 194 AGSRPVAMVNQ 204

[Close]

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot
Match: Q8YXH5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-66
Identity = 125/187 (66.84%), Postives = 149/187 (79.68%), Query Frame = 0


Query: 109 ERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAG 168
           ER   + S+L + RI+  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAG
Sbjct: 14  ERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAG 73

Query: 169 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 228
           M IFDTM+HIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG  T
Sbjct: 74  MGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQAT 133

Query: 229 DIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPL 288
           DI+IQA E+L+HK  LN YL+ HTGQ +E+I +DT+RDFFMS  EAK+YGLID VI    
Sbjct: 134 DIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHA 193

Query: 289 KALQPLA 296
              +P+A
Sbjct: 194 AGSRPVA 200

[Close]

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot
Match: Q2JIP1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-63
Identity = 124/189 (65.61%), Postives = 152/189 (80.42%), Query Frame = 0


Query: 109 ERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAG 168
           ER   + S+L + RII  G  VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AG
Sbjct: 13  ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAG 72

Query: 169 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 228
           MAI+DTM+HI+PDVST+C+GLAASMGAFLL+ GTKGKR +LP++RIMIHQPLGGAQG  T
Sbjct: 73  MAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPAT 132

Query: 229 DIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPL 288
           DI+IQA E+L  K +LN  L+YHTGQ LE+I +DTDRD FM+ ++AKEYGLID VI    
Sbjct: 133 DIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVIS--- 192

Query: 289 KALQPLAAA 298
           K  QP  AA
Sbjct: 193 KRPQPTLAA 198

[Close]

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot
Match: P54416 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 9.4e-63
Identity = 121/186 (65.05%), Postives = 148/186 (79.57%), Query Frame = 0


Query: 109 ERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAG 168
           +R   + S+L + RI+  G  V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG
Sbjct: 13  DRAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAG 72

Query: 169 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 228
           + IFDTM  IRPDV T+C+GLAASMGAFLLSAG KGKR SLPNSRIMIHQPLGGAQG  T
Sbjct: 73  LGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQAT 132

Query: 229 DIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPL 288
           DI+IQA E+L+ KA LN +L+ HTG+SLE+I  DT+RDFFMSA+E+KEYGLID VI    
Sbjct: 133 DIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKEYGLIDQVINRRP 192

Query: 289 KALQPL 295
            A  P+
Sbjct: 193 SASDPI 198

[Close]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL
Match: A0A5A7TNH0 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001490 PE=3 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 290/297 (97.64%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQK FLPLEPFHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKFFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KA+YSGEFSS+DRNSRQGIWSIRDDVQ+PSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAMYSGEFSSMDRNSRQGIWSIRDDVQVPSSPYFPVYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVIMNPLKALQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL
Match: A0A1S3BY88 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103494727 PE=3 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 290/297 (97.64%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQK FLPLEPFHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKFFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KA+YSGEFSS+DRNSRQGIWSIRDDVQ+PSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAMYSGEFSSMDRNSRQGIWSIRDDVQVPSSPYFPVYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVIMNPLKALQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL
Match: A0A6J1DRD0 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111022448 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.5e-161
Identity = 290/302 (96.03%), Postives = 294/302 (97.35%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSS+SQKLFLPL+PF SRKLGKLVGGGRNLKNTPV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYS EFSSLDR+SRQG+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERF SVISQLFQ
Sbjct: 61  KAIYSSEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFHSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAATEG 300
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA   
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT 300

Query: 301 SA 303
            A
Sbjct: 301 EA 302

[Close]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL
Match: A0A6J1K7I3 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111492965 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.1e-158
Identity = 282/297 (94.95%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTF YTSASSFRLNSLVSVPNSSSSSDSQKLFLPLE FHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYSGEFSSLD++SRQG+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL
Match: A0A6J1GAD0 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452367 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.2e-157
Identity = 279/297 (93.94%), Postives = 292/297 (98.32%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTF YTSASSFRLNSLVSVPNSSSSS+SQKLFLPLE FHSRKLGK VGGGRNLKN+PV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKFVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYSGEFSSLD++SR+G+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRRGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. NCBI nr
Match: XP_038906134.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 583.9 bits (1504), Expect = 7.7e-163
Identity = 292/299 (97.66%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSS+S KLFLPLEPFHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSESHKLFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           K++YSGE SSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KSVYSGELSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAATE 300
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA E
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAE 299

[Close]

BLAST of Lsi03G011170 vs. NCBI nr
Match: XP_008454281.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucumis melo] >KAA0044418.1 ATP-dependent Clp protease proteolytic subunit 5 [Cucumis melo var. makuwa] >TYK29545.1 ATP-dependent Clp protease proteolytic subunit 5 [Cucumis melo var. makuwa])

HSP 1 Score: 582.4 bits (1500), Expect = 2.2e-162
Identity = 290/297 (97.64%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQK FLPLEPFHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKFFLPLEPFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KA+YSGEFSS+DRNSRQGIWSIRDDVQ+PSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAMYSGEFSSMDRNSRQGIWSIRDDVQVPSSPYFPVYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAK+YGLIDGVIMNPLKALQPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKDYGLIDGVIMNPLKALQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. NCBI nr
Match: XP_022155316.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Momordica charantia])

HSP 1 Score: 577.0 bits (1486), Expect = 9.4e-161
Identity = 290/302 (96.03%), Postives = 294/302 (97.35%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTFAYTSASSFRLNSLVSVPNSSSSS+SQKLFLPL+PF SRKLGKLVGGGRNLKNTPV
Sbjct: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSESQKLFLPLDPFQSRKLGKLVGGGRNLKNTPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYS EFSSLDR+SRQG+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERF SVISQLFQ
Sbjct: 61  KAIYSSEFSSLDRSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFHSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAATEG 300
           KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA   
Sbjct: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAAAAT 300

Query: 301 SA 303
            A
Sbjct: 301 EA 302

[Close]

BLAST of Lsi03G011170 vs. NCBI nr
Match: XP_022998282.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita maxima])

HSP 1 Score: 568.2 bits (1463), Expect = 4.4e-158
Identity = 282/297 (94.95%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTF YTSASSFRLNSLVSVPNSSSSSDSQKLFLPLE FHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYSGEFSSLD++SRQG+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. NCBI nr
Match: KAG7036637.1 (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 566.6 bits (1459), Expect = 1.3e-157
Identity = 281/297 (94.61%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNSLVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTPV 60
           MAHTF YTSASSFRLNSLVSVPNSSSSS+SQKLFLPLE FHSRKLGKLVGGGRNLKN+PV
Sbjct: 1   MAHTFTYTSASSFRLNSLVSVPNSSSSSESQKLFLPLENFHSRKLGKLVGGGRNLKNSPV 60

Query: 61  KAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQ 120
           KAIYSGEFSSLD++SRQG+WSIRDDVQIPSSPYFP YAQGQGPPPMVQERFQSVISQLFQ
Sbjct: 61  KAIYSGEFSSLDKSSRQGLWSIRDDVQIPSSPYFPTYAQGQGPPPMVQERFQSVISQLFQ 120

Query: 121 YRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRP 180
           +RI+RCGGAVDDDMANIIVAQLLYLDAVDPNKDI++YVNSPGGSVTAGMAIFDTMRHIRP
Sbjct: 121 HRIVRCGGAVDDDMANIIVAQLLYLDAVDPNKDIILYVNSPGGSVTAGMAIFDTMRHIRP 180

Query: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHH 240
           DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEML+H
Sbjct: 181 DVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLYH 240

Query: 241 KANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           KANLNGYLSYHTGQSLEKIN+DTDRDFFMSAKEA+EYGLIDGVIMNPLKA QPLAAA
Sbjct: 241 KANLNGYLSYHTGQSLEKINEDTDRDFFMSAKEAEEYGLIDGVIMNPLKAFQPLAAA 297

[Close]

BLAST of Lsi03G011170 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 491.9 bits (1265), Expect = 3.7e-139
Identity = 251/298 (84.23%), Postives = 263/298 (88.26%), Query Frame = 0


Query: 1   MAHTFAYTSASSFRLNS-LVSVPNSSSSSDSQKLFLPLEPFHSRKLGKLVGGGRNLKNTP 60
           MAH    TSASS R  +  VS   + SS DS KL LP EP  SRK  KLV   +N KN+ 
Sbjct: 1   MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNST 60

Query: 61  VKAIYSGEFSSLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLF 120
            KA+YSG   + +  S QG+WSIRDD+Q+PSSPYFPAYAQGQGPPPMVQERFQS+ISQLF
Sbjct: 61  PKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLF 120

Query: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180
           QYRIIRCGGAVDDDMANIIVAQLLYLDAVDP KDIVMYVNSPGGSVTAGMAIFDTMRHIR
Sbjct: 121 QYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIR 180

Query: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240
           PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH
Sbjct: 181 PDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLH 240

Query: 241 HKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298
           HKANLNGYL+YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA
Sbjct: 241 HKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA 298

[Close]

BLAST of Lsi03G011170 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-50
Identity = 106/215 (49.30%), Postives = 142/215 (66.05%), Query Frame = 0


Query: 70  SLDRNSRQGIWSIRDDVQIPSSPYFPAYAQGQGPPPMVQERFQSVISQLFQYRIIRCGGA 129
           SL +  RQ + S  D     SS    + AQ     P  +E      + L + RI+  G  
Sbjct: 48  SLSKPPRQTLSSNWD----VSSFSIDSVAQSPSRLPSFEE--LDTTNMLLRQRIVFLGSQ 107

Query: 130 VDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGL 189
           VDD  A+++++QLL LDA D  +DI +++NSPGGS+TAGM I+D M+  + DVSTVC+GL
Sbjct: 108 VDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGL 167

Query: 190 AASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLS 249
           AASMGAFLL++G+KGKRY +PNS++MIHQPLG A G  T++ I+  EM++HK  LN   S
Sbjct: 168 AASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFS 227

Query: 250 YHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
             TG+   +I  DTDRD F++  EAKEYGLID VI
Sbjct: 228 RITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVI 256

[Close]

BLAST of Lsi03G011170 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-48
Identity = 90/171 (52.63%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 114 VISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFD 173
           V+  L + RI+  G ++DD +A+ I++QLL LDA DP KDI +++NSPGGS++A MAI+D
Sbjct: 80  VMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYD 139

Query: 174 TMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQ 233
            ++ +R DVST+ +G+AAS  + +L AGTKGKR+++PN+RIMIHQPLGGA G   D++IQ
Sbjct: 140 VVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQ 199

Query: 234 ANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
           A E++H+K N+   ++  T +S E++ +D DRD +MS  EA EYGLIDGVI
Sbjct: 200 AKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

[Close]

BLAST of Lsi03G011170 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-45
Identity = 88/176 (50.00%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 109 ERFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAG 168
           ER   + S+L + RII   G ++DD ++++VAQLLYL++ +P+K I MY+NSPGG VTAG
Sbjct: 44  ERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAG 103

Query: 169 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQT 228
           +AI+DTM++IR  +ST+C+G AASM + LL+AG KG+R SLPN+ +MIHQP GG  G   
Sbjct: 104 LAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAK 163

Query: 229 DIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285
           DI I   +++     LN     HTGQ L+ +  + DRD FM+ +EAK +G+ID VI
Sbjct: 164 DITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVI 219

[Close]

BLAST of Lsi03G011170 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 83/199 (41.71%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 91  SPYFPAYAQGQGPPPMVQERFQ-----SVISQLFQYRIIRCGGAVDDDMANIIVAQLLYL 150
           +P F      +G PP++           + S LF+ RII  G  ++  +A  +++QL+ L
Sbjct: 69  APRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTL 128

Query: 151 DAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 210
            ++D   DI+MY+N PGGS  + +AI+D M  I+P V TV  G+AAS GA LL+ G KG 
Sbjct: 129 ASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGM 188

Query: 211 RYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDR 270
           RY++PN+R+MIHQP  G  G   D+  Q NE +  +  ++   +  TGQ LEK+ Q T+R
Sbjct: 189 RYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTER 248

Query: 271 DFFMSAKEAKEYGLIDGVI 285
           D F+SA EA E+GLIDG++
Sbjct: 249 DRFLSASEALEFGLIDGLL 267

The following BLAST results are available for this feature:

BLAST of Lsi03G011170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S834	5.2e-138	84.23	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis t...	[more]
Q3MFR5	1.4e-66	65.97	ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strai...	[more]
Q8YXH5	4.1e-66	66.84	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
Q2JIP1	1.4e-63	65.61	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA...	[more]
P54416	9.4e-63	65.05	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PC...	[more]

BLAST of Lsi03G011170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TNH0	1.1e-162	97.64	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BY88	1.1e-162	97.64	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1DRD0	4.5e-161	96.03	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1K7I3	2.1e-158	94.95	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GAD0	5.2e-157	93.94	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Lsi03G011170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906134.1	7.7e-163	97.66	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Benincasa hispi...	[more]
XP_008454281.1	2.2e-162	97.64	PREDICTED: ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucu...	[more]
XP_022155316.1	9.4e-161	96.03	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Momordica chara...	[more]
XP_022998282.1	4.4e-158	94.95	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita maxim...	[more]
KAG7036637.1	1.3e-157	94.61	ATP-dependent Clp protease proteolytic subunit 5, chloroplastic [Cucurbita argyr...	[more]

BLAST of Lsi03G011170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02560.1	3.7e-139	84.23	nuclear encoded CLP protease 5	[more]
AT1G66670.1	2.5e-50	49.30	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	5.1e-48	52.63	CLP protease P4	[more]
AT5G23140.1	4.1e-45	50.00	nuclear-encoded CLP protease P7	[more]
AT1G11750.1	1.7e-38	41.71	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 153..173 score: 61.19 coord: 205..224 score: 64.62 coord: 184..201 score: 66.67 coord: 262..281 score: 66.88 coord: 113..128 score: 29.84
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 90..287 score: 39.330757
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 114..283 e-value: 3.31216E-107 score: 307.061
None	No IPR available	GENE3D	3.90.226.10		coord: 105..287 e-value: 3.9E-82 score: 276.7
None	No IPR available	PANTHER	PTHR10381:SF12	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC	coord: 33..299
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 108..286 e-value: 2.7E-80 score: 268.6
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 33..299
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 206..219
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 184..195
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 109..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G011170.1	Lsi03G011170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity