Lsi03G010930 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosomal protein L19
Location	chr03: 20868962 .. 20871135 (+)
RNA-Seq Expression	Lsi03G010930
Synteny	Lsi03G010930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGGGCAAAAGCCGCACCAGCGTTCGTATATAAATAGCGCAAGAATCAGTTGCGCGATTCTCTTGGATTGCAGCAGCACGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGTAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCCATGGCGAATTCTCGTACGTTCCTTTTTCTTTTTTCTTCATTTTATTTGATTCCTTTCTTCTTCTACGACCTGTTGGGATTTGTATTTGATCTGCTTGTTTGTTAAGTTGCTTTTGTTTATGGAAGATGTCGTAGGTCGATTGTTGCTTAATTTGATGAGTATCCCTAAACTGTCGAGTTGGGTTTTTAATTTTGATCTGCTTGGTTTAAACTTGGTTGGTTTTATGAAATTATTTAATTCCGGAAACATGGTTTTTGAGATGCCTTTTTCTTATATATTCTGATTTTGTTTTTTCTGGGAGCCTAGTTTAAACATTTAGTATGTGTGTTCTGTTTTGTTTTTGGGTTGATTGAAGGGGTGTTTTGTTTGGTGCAGGCCAAAATATTAGGAAGTTGGTGAAAGATGGATTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGGATGAAGGAGGCTAAGAGGAAGGGACGTCACTCTGGATACGGTATTTTTCTTTCGAGTCCGGCTGGTGTTATTGCTTTAGTAAACGCACTATATTCGTGGAGAGTACCGTGTGTGCAGGACATGGGCAACTTATAGAGTGATGTATCAATTGTTTTTGAAGATCATTTTTTTAGAGAAATTGAAGATGAGAAACTCATACTCTTAAGAGACATAAAAACACTTGCATCAAGGAAATTAGACACGAGGAGAAAACTATAAATATAGATGCTTTACCAGCCAAAAGAACCAAGGGCATATAGTTATTAGTTGCGGAAGATATGGGCGGTTATATCAAGTTGAATTCTCCGCCTTTTTGTCTTTTTGATGAAGACTGTGTGTTCGTCCATTTGACACTATATTGCAGCTGTTAAATGTTTTTTTTTTCCTTTGGTAAACGAGTTTAACGATTTGATAATTTTCTTTAAATCCTATATTTCATTTGGGTAACAGATACATCCATTTTAAACTTTAACTTGGGTAGATTGTAGATTCATCATGCTTAAAAAATATAGGTAATGGGATGCTTAGTAATCTGTGAATTTTATCACATAATGGATTAGAGGTCTTGAGAATTAGGAAGCAAGAAGTGCTTGTATGGCATCATTATCGTTATTTTCTATAGTGAAGTGCTTTTATGATGAGTTAGTCATTAATTATGTCTGCTGCATTTAGGTAAGCGTAAGGGTACCAGAGAAGCTAGATTGCCCACCAAGATCCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTATAGGGAGTCCAAAAAGATTGACAAACATATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGCATCCACAAATCAAAGGCTGAAAAGGCAAGAGAGAAGACATTATCAGATCAATTTGAGGCGAAGAGAGCAAAGAACAAGGCCAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTGGCCCAGGTAGTTAATCACTTCATTTTTTTTTTTCAAAATTGTTCCCAAATACGCATCATATTTTGACAACATGACATTTCTTTGCCCTATCAAATGCTCTGCTTTATTCATGAATTTCTTTCATATTAGCTTTACTCCATATTAGATTATTGACTTTGAATTGTCATTTAGGGGCCTGGAGAAAAACGAGTCACCGCTGCTGCCCCAGTTGCTGCGTCTCAAGCCACTCAGTAAGTATTTATGAATTTTTTTGAATTAAGTAAATCAGATAGCTGACTTATATATTAAACCAACCTTCTTCCTCTTTCAGGGTACCAAAAAAAGCAAAGAAGTGAGCTTCTGATCGTTCGTAGATCCTTAATTACTGTACTGGTTTTGACCACTTTTGTCGTTTTTCTTGTCTTGGACAATTTTCCTTGTTATCAAAATCCCAGACGAATAGATATCTACATCTATAATTTTTCTAATTTATCAATCGTTCCATCTTTGGGTTTTTTTTTT

mRNA sequence

CTAGGGCAAAAGCCGCACCAGCGTTCGTATATAAATAGCGCAAGAATCAGTTGCGCGATTCTCTTGGATTGCAGCAGCACGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGTAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCCATGGCGAATTCTCGCCAAAATATTAGGAAGTTGGTGAAAGATGGATTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGGATGAAGGAGGCTAAGAGGAAGGGACGTCACTCTGGATACGGTAAGCGTAAGGGTACCAGAGAAGCTAGATTGCCCACCAAGATCCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTATAGGGAGTCCAAAAAGATTGACAAACATATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGCATCCACAAATCAAAGGCTGAAAAGGCAAGAGAGAAGACATTATCAGATCAATTTGAGGCGAAGAGAGCAAAGAACAAGGCCAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTGGCCCAGGGGCCTGGAGAAAAACGAGTCACCGCTGCTGCCCCAGTTGCTGCGTCTCAAGCCACTCAGGTACCAAAAAAAGCAAAGAAGTGAGCTTCTGATCGTTCGTAGATCCTTAATTACTGTACTGGTTTTGACCACTTTTGTCGTTTTTCTTGTCTTGGACAATTTTCCTTGTTATCAAAATCCCAGACGAATAGATATCTACATCTATAATTTTTCTAATTTATCAATCGTTCCATCTTTGGGTTTTTTTTTT

Coding sequence (CDS)

ATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGTAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCCATGGCGAATTCTCGCCAAAATATTAGGAAGTTGGTGAAAGATGGATTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGGATGAAGGAGGCTAAGAGGAAGGGACGTCACTCTGGATACGGTAAGCGTAAGGGTACCAGAGAAGCTAGATTGCCCACCAAGATCCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTATAGGGAGTCCAAAAAGATTGACAAACATATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGCATCCACAAATCAAAGGCTGAAAAGGCAAGAGAGAAGACATTATCAGATCAATTTGAGGCGAAGAGAGCAAAGAACAAGGCCAGTAGGGAAAGAAAGTTTGCCAGAAGAGAGGAACGGTTGGCCCAGGGGCCTGGAGAAAAACGAGTCACCGCTGCTGCCCCAGTTGCTGCGTCTCAAGCCACTCAGGTACCAAAAAAAGCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKRVTAAAPVAASQATQVPKKAKK

Homology

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BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.5e-88
Identity = 181/213 (84.98%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAA---SQATQVPKKAKK 211
           LA+GPG      AAP  A   +    VPKK  K
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSK 213

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BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.9e-88
Identity = 179/210 (85.24%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPG    T   P  A Q  +V KK  K
Sbjct: 181 LAQGPGGGETT--TPAGAPQQPEVTKKKSK 208

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BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-87
Identity = 182/211 (86.26%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVP-KKAKK 211
           LA+GPG   + AAAP A  Q  +VP KK+KK
Sbjct: 181 LAKGPGGD-IPAAAPPA--QTAEVPAKKSKK 208

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BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-63
Identity = 129/182 (70.88%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

Query: 181 LA 183
           +A
Sbjct: 181 IA 178

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BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.4e-62
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

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BLAST of Lsi03G010930 vs. ExPASy TrEMBL
Match: A0A6J1DR76 (Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111022408 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 204/210 (97.14%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAP AASQATQV KKAKK
Sbjct: 181 LAQGPGEKPAAAAAPAAASQATQVSKKAKK 210

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BLAST of Lsi03G010930 vs. ExPASy TrEMBL
Match: A0A6J1F757 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAPVAASQ TQV KKAKK
Sbjct: 181 LAQGPGEK-PAAAAPVAASQPTQVSKKAKK 209

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BLAST of Lsi03G010930 vs. ExPASy TrEMBL
Match: A0A6J1KC41 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111492970 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGE R+  AAPVA+SQATQV KKAKK
Sbjct: 181 LAQGPGE-RLAPAAPVASSQATQVSKKAKK 209

[Close]

BLAST of Lsi03G010930 vs. ExPASy TrEMBL
Match: A0A6J1GCJ6 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111452741 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK +  AAPVA+SQATQV KKAKK
Sbjct: 181 LAQGPGEK-LAPAAPVASSQATQVSKKAKK 209

[Close]

BLAST of Lsi03G010930 vs. ExPASy TrEMBL
Match: A0A6J1J470 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97
Identity = 203/210 (96.67%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGR KVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRVKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAPVAASQ TQV KKAKK
Sbjct: 181 LAQGPGEK-PAAAAPVAASQPTQVSKKAKK 209

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BLAST of Lsi03G010930 vs. NCBI nr
Match: XP_022155266.1 (60S ribosomal protein L19-1 [Momordica charantia])

HSP 1 Score: 371.3 bits (952), Expect = 5.4e-99
Identity = 204/210 (97.14%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAP AASQATQV KKAKK
Sbjct: 181 LAQGPGEKPAAAAAPAAASQATQVSKKAKK 210

[Close]

BLAST of Lsi03G010930 vs. NCBI nr
Match: XP_022934250.1 (60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018007.1 60S ribosomal protein L19-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 368.6 bits (945), Expect = 3.5e-98
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAPVAASQ TQV KKAKK
Sbjct: 181 LAQGPGEK-PAAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Lsi03G010930 vs. NCBI nr
Match: XP_038906352.1 (60S ribosomal protein L19-2 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 204/210 (97.14%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK   AAAPVAASQATQV KKAKK
Sbjct: 181 LAQGPGEK--PAAAPVAASQATQVSKKAKK 208

[Close]

BLAST of Lsi03G010930 vs. NCBI nr
Match: XP_022998290.1 (60S ribosomal protein L19-1 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.3e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGE R+  AAPVA+SQATQV KKAKK
Sbjct: 181 LAQGPGE-RLAPAAPVASSQATQVSKKAKK 209

[Close]

BLAST of Lsi03G010930 vs. NCBI nr
Match: XP_022949365.1 (60S ribosomal protein L19-1 [Cucurbita moschata] >XP_023525734.1 60S ribosomal protein L19-1 [Cucurbita pepo subsp. pepo] >KAG6606951.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036655.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.9 bits (938), Expect = 2.3e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPGEK +  AAPVA+SQATQV KKAKK
Sbjct: 181 LAQGPGEK-LAPAAPVASSQATQVSKKAKK 209

[Close]

BLAST of Lsi03G010930 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-89
Identity = 181/213 (84.98%), Postives = 192/213 (90.14%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAA---SQATQVPKKAKK 211
           LA+GPG      AAP  A   +    VPKK  K
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSK 213

[Close]

BLAST of Lsi03G010930 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 325.1 bits (832), Expect = 4.2e-89
Identity = 179/210 (85.24%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVPKKAKK 211
           LAQGPG    T   P  A Q  +V KK  K
Sbjct: 181 LAQGPGGGETT--TPAGAPQQPEVTKKKSK 208

[Close]

BLAST of Lsi03G010930 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 323.2 bits (827), Expect = 1.6e-88
Identity = 182/211 (86.26%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKRVTAAAPVAASQATQVP-KKAKK 211
           LA+GPG   + AAAP A  Q  +VP KK+KK
Sbjct: 181 LAKGPGGD-IPAAAPPA--QTAEVPAKKSKK 208

[Close]

BLAST of Lsi03G010930 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 78.2 bits (191), Expect = 8.9e-15
Identity = 69/140 (49.29%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERKF+ 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 113

Query: 178 REERLAQGP-GEKRVTAAAP 196
            E RLA  P GEK  TA+AP
Sbjct: 127 SEMRLALEPEGEK--TASAP 113

The following BLAST results are available for this feature:

BLAST of Lsi03G010930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	1.5e-88	84.98	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
Q9LUQ6	5.9e-88	85.24	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P49693	2.2e-87	86.26	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
P36241	2.2e-63	70.88	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
Q3T0W9	9.4e-62	69.61	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Lsi03G010930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR76	2.6e-99	97.14	Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111022408 PE=3 SV=1	[more]
A0A6J1F757	1.7e-98	97.14	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1	[more]
A0A6J1KC41	1.1e-97	96.19	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111492970 PE=3 SV=1	[more]
A0A6J1GCJ6	1.1e-97	96.19	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111452741 PE=3 SV=1	[more]
A0A6J1J470	1.9e-97	96.67	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1	[more]

BLAST of Lsi03G010930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155266.1	5.4e-99	97.14	60S ribosomal protein L19-1 [Momordica charantia]	[more]
XP_022934250.1	3.5e-98	97.14	60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosoma...	[more]
XP_038906352.1	1.0e-97	97.14	60S ribosomal protein L19-2 [Benincasa hispida]	[more]
XP_022998290.1	2.3e-97	96.19	60S ribosomal protein L19-1 [Cucurbita maxima]	[more]
XP_022949365.1	2.3e-97	96.19	60S ribosomal protein L19-1 [Cucurbita moschata] >XP_023525734.1 60S ribosomal p...	[more]

BLAST of Lsi03G010930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	1.1e-89	84.98	Ribosomal protein L19e family protein	[more]
AT3G16780.1	4.2e-89	85.24	Ribosomal protein L19e family protein	[more]
AT4G02230.1	1.6e-88	86.26	Ribosomal protein L19e family protein	[more]
AT4G16030.1	8.9e-15	49.29	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 4.3E-97 score: 338.5
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 1.2E-64 score: 216.7
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.614826
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..192 e-value: 8.2E-59 score: 199.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..210
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..210
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 9.6E-32 score: 110.6
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..210
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 1.384E-76 score: 225.692
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010930.1	Lsi03G010930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome