Lsi03G010160 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGCTTACATTTATTTATTGCGTTTTCGTCGGACAGTAAACGACGTCGTTCTCTTCTTCTTCTCCGGACGGCTCGCTGTTCCGCAGGCTCCGGCTCCGCATTCTTCTTCTACGGTTCATAAATTAAAGGGAAGAAGAAGAATCTAAATCAAAGGTTCAGAACGAGGGGTCATCGCCAAAAGGGCTCGTGATTCTTGTTTTTTTTTCCACCGGTCATTAATTATTATGGCGGACAAGAACAGGAGAGCCTCTCCGCCATTTGACTAATTATGGCGTCCCATTTCCCTTTGATTTCATCACTCGGTTTCTTTTTTAGTTTTTCTATTTATTTTTCAGTCAATTATGTTTCCCTTTTGAGATGTGTGTAAGATATGGTTGCGATTGGGGGAATTTCGTTGCCGGGTTTTGTGCCGCCGTCGCTCCACCACCAATCCTTTTCGCCATCGGCGATTGGGTTCGCGAGGTTTCCCGATAGGATTAGCTTCAGATCGTTGGTGGTTTTGCGGGATGGGGTTGAGAAGAAGGGTTCGAGGGTGGTGATTGTTAACGGGAAGGTCGATGGTTTGGGTAAGAGTGAATGCGAGACTGAGTTTGATACTACCTTGGGCAATGGACATGCTGGGAACTCGGGTATTGCTTCTTTTGATGTCTTTCGATGTAATCTTGAATCAAGGACTTTGATTTTGGGTGAATCAGAATATCTGTTATTTTTTGGTTCTTGAGATTTTGAATCATCTCATTGAAATTACTGGTGTTTTGGTTATCTTGTTTGATTCATTAGATAGTGGAAATAAGATAATTGGATGAGCAAGAACCTTATTGTTTGTATTTATGTAGATATTAGTTATGTTGTCATTGACATTTTCAGTATTTATCTACACATTTACAATTTGATGTTGAACTCTTTGATTTATAGGAATGCTGATGTAATTGCAGAATGTTTGAATTGTTTCTATGTTGGCATAAGCTTATATTGTGGTGTCCTATTTTTCTCTTCATGGTGTGAGTTTCTCTTCTGTAGTTTAAGCTGTATAGATTACTAAGATGCTTTTCAATCAGGAAAAAATCATGGAGTGTTATCCACAGTAGGAAATTCTACTAATATCAAGTGGCATGAATGTTCAGTTGGAAAGGTTGAAAAACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGTTTGTTATTTAACCTTTTCCTTTTGCTTTTACAGCATAATGGTTATTATCTTTTTATGTCATATTCATGGTTTAGAGAATCTATAGTTTAGATTGTCTTCAAATGAACCTATGGTTTGGATAACAGACCAAACCCAACCATGAAATATTTGAGTTTGATTTTTCAGGTCATTTTTTAAAAGATTTTGTGGAAAGGATAGCAAAAAAATTGGCCTGAAATAGTTAAGTTGGGTTTGGGACTTTTTGGACCTTACCCAATTCTTCTAAATATTCTTAGCTAACTTGCAGGGAAGAGCACTGTGGCCTGTGCCTTGAGTCAAAGCTTATACCAAATGGGAAAGTTGGCTTATATTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAATATAAGGAGGGTCGGTAAGTTCGGTTCATTTACAACACTTTGGATTGGGCTGTTCATGATTGCTAATTATACCTCTTCCATAAATAGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCCCCATATCGAAGGGACCGAGATGCCTGTCGTGCCATTTTGCCTGATGGATACTTTATTGAGGTATCCCTTCATTTTATGCATACTATAGATTTTGAGCAGGCTTTTTACCTTGCATCTGAAATATTTATGACAAAAATGTGCTAAAAATATATAGGTGTTCATGGATGTTCCTCTTGAAGTCTGTGAAGCAAGAGATACAAAAGGACTGTATAAGCTTGCACGGGCAGGGAAGATCAAAGGTCACTGCAACTTGTTAACATCTTCCTTAGATTTACTTGATGATCTTGTTAATTCTCACTTATTTTTTAATGTGATTTGAGTATTACTTTAATCTTATTTTGGCTCCTAACTTTCACAACCTAAGTTTTGACTCAAAGATATTGTCGAATGGGCTTAAGTTAACTATATATGCTCAGAATTATCATAATTTCTCTATCAACTGAACAAAGTCGTATTTTTGCAGGCTTTACTGGTATCGATGATCCGTATGAAGTACCATTGAATTGTGAGGTAATTCCAAATTCTGGAGGAAAATGAAAACATCTCTTTAAACATTCTTGCAAAAAATCAATGCTTCTACTACATCGAAACTCGAAAGTAAATGTTTTTGCAATATATACTAATGGTTATGAATAAAGTGGTTTGTGTTATGAATGAGACATTGTTTCTGAATCTGATTGGGATACCCTTTTGAACTTTTTTGGTTTCAGATAGTACTGAAACACAATGGAGGTTTCCCATGTGAGATGGCAGAGAAAGTACTGAGTTACTTAGAGCAGAAGGGCTTCCTGCAGGCTTAAACTCAAACTCTATGAGAAAAGGGGCTCTTAACAGCTGAAGTTTTGGTTGAAATTTTTATTCTACTTTAGAGCAAATCCACTTAACTTAAGCTTTGGCTTTGCTTATTTGTTTTGTGACATCTAATTTGCTTCTTCTTTGTCCACTTCTTTTTCTGGATACAGATAGGAATGAAGGTTTGGCTTAGAATGTGATCTGAAAAAGGTTGTATGTGAGGATACATCAATTCATTTTGCTATTTTTTTTTTTTTTTTGCCCCCTTTGATCTGTGTAATGTAATATAGAGTTGTTTGAAACAGGGTCGAATGTTTTATACAAAAAGTATATCAAATATTTTTGTTGAAACTAGAAGTCAATCTCAGTCTCTCTCTCTCTAGTATATATACAAAAGGAGTTTCAAATCTATCTTATATCGCGAAAGCGAGTATAATTCAATTGTTATTGATCTATACTCCTTTTTTTCGAAATTGGAGGTTCAAATCTTCATATTTTCATTTGTTATGCTACAAAAAAATCTCTCTTATTTGAATAAAAAGAAGCTTGATGGTGTAAGTGAGAGAATTTGTGTTTAGGTGTAGGTTAGTGAGTGTGAGGAGAGAAACCAATTAGAGATTAGTGGGGAGAGGAGTTAGTGGGTGATATCTATGTGT CTCGCTTACATTTATTTATTGCGTTTTCGTCGGACAGTAAACGACGTCGTTCTCTTCTTCTTCTCCGGACGGCTCGCTGTTCCGCAGGCTCCGGCTCCGCATTCTTCTTCTACGGTTCATAAATTAAAGGGAAGAAGAAGAATCTAAATCAAAGGTTCAGAACGAGGGGTCATCGCCAAAAGGGCTCGTGATTCTTGTTTTTTTTTCCACCGGTCATTAATTATTATGGCGGACAAGAACAGGAGAGCCTCTCCGCCATTTGACTAATTATGGCGTCCCATTTCCCTTTGATTTCATCACTCGGTTTCTTTTTTAGTTTTTCTATTTATTTTTCAGTCAATTATGTTTCCCTTTTGAGATGTGTGTAAGATATGGTTGCGATTGGGGGAATTTCGTTGCCGGGTTTTGTGCCGCCGTCGCTCCACCACCAATCCTTTTCGCCATCGGCGATTGGGTTCGCGAGGTTTCCCGATAGGATTAGCTTCAGATCGTTGGTGGTTTTGCGGGATGGGGTTGAGAAGAAGGGTTCGAGGGTGGTGATTGTTAACGGGAAGGTCGATGGTTTGGGTAAGAGTGAATGCGAGACTGAGTTTGATACTACCTTGGGCAATGGACATGCTGGGAACTCGGGAAAAAATCATGGAGTGTTATCCACAGTAGGAAATTCTACTAATATCAAGTGGCATGAATGTTCAGTTGGAAAGGTTGAAAAACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGGAAGAGCACTGTGGCCTGTGCCTTGAGTCAAAGCTTATACCAAATGGGAAAGTTGGCTTATATTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAATATAAGGAGGGTCGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCCCCATATCGAAGGGACCGAGATGCCTGTCGTGCCATTTTGCCTGATGGATACTTTATTGAGGTGTTCATGGATGTTCCTCTTGAAGTCTGTGAAGCAAGAGATACAAAAGGACTGTATAAGCTTGCACGGGCAGGGAAGATCAAAGGCTTTACTGGTATCGATGATCCGTATGAAGTACCATTGAATTGTGAGATAGTACTGAAACACAATGGAGGTTTCCCATGTGAGATGGCAGAGAAAGTACTGAGTTACTTAGAGCAGAAGGGCTTCCTGCAGGCTTAAACTCAAACTCTATGAGAAAAGGGGCTCTTAACAGCTGAAGTTTTGATAGGAATGAAGGTTTGGCTTAGAATGTGATCTGAAAAAGGTTGTATGTGAGGATACATCAATTCATTTTGCTATTTTTTTTTTTTTTTTGCCCCCTTTGATCTGTGTAATGTAATATAGAGTTGTTTGAAACAGGGTCGAATGTTTTATACAAAAAGTATATCAAATATTTTTGTTGAAACTAGAAGTCAATCTCAGTCTCTCTCTCTCTAGTATATATACAAAAGGAGTTTCAAATCTATCTTATATCGCGAAAGCGAGTATAATTCAATTGTTATTGATCTATACTCCTTTTTTTCGAAATTGGAGGTTCAAATCTTCATATTTTCATTTGTTATGCTACAAAAAAATCTCTCTTATTTGAATAAAAAGAAGCTTGATGGTGTAAGTGAGAGAATTTGTGTTTAGGTGTAGGTTAGTGAGTGTGAGGAGAGAAACCAATTAGAGATTAGTGGGGAGAGGAGTTAGTGGGTGATATCTATGTGT ATGGTTGCGATTGGGGGAATTTCGTTGCCGGGTTTTGTGCCGCCGTCGCTCCACCACCAATCCTTTTCGCCATCGGCGATTGGGTTCGCGAGGTTTCCCGATAGGATTAGCTTCAGATCGTTGGTGGTTTTGCGGGATGGGGTTGAGAAGAAGGGTTCGAGGGTGGTGATTGTTAACGGGAAGGTCGATGGTTTGGGTAAGAGTGAATGCGAGACTGAGTTTGATACTACCTTGGGCAATGGACATGCTGGGAACTCGGGAAAAAATCATGGAGTGTTATCCACAGTAGGAAATTCTACTAATATCAAGTGGCATGAATGTTCAGTTGGAAAGGTTGAAAAACAGAGCCTTCTCAAACAGAAAGGATGTGTCATATGGATCACAGGTCTCAGTGGCTCAGGGAAGAGCACTGTGGCCTGTGCCTTGAGTCAAAGCTTATACCAAATGGGAAAGTTGGCTTATATTCTTGATGGGGACAATGTCAGGCATGGCTTGAATCGTGACCTTGGTTTTAAAGCAGAAGATCGTGCTGAGAATATAAGGAGGGTCGGTGAGGTTGCAAAACTGTTTGCAGACGCTGGAGTTATTTGCATTGCTAGTTTGATATCCCCATATCGAAGGGACCGAGATGCCTGTCGTGCCATTTTGCCTGATGGATACTTTATTGAGGTGTTCATGGATGTTCCTCTTGAAGTCTGTGAAGCAAGAGATACAAAAGGACTGTATAAGCTTGCACGGGCAGGGAAGATCAAAGGCTTTACTGGTATCGATGATCCGTATGAAGTACCATTGAATTGTGAGATAGTACTGAAACACAATGGAGGTTTCCCATGTGAGATGGCAGAGAAAGTACTGAGTTACTTAGAGCAGAAGGGCTTCCTGCAGGCTTAA MVAIGGISLPGFVPPSLHHQSFSPSAIGFARFPDRISFRSLVVLRDGVEKKGSRVVIVNGKVDGLGKSECETEFDTTLGNGHAGNSGKNHGVLSTVGNSTNIKWHECSVGKVEKQSLLKQKGCVIWITGLSGSGKSTVACALSQSLYQMGKLAYILDGDNVRHGLNRDLGFKAEDRAENIRRVGEVAKLFADAGVICIASLISPYRRDRDACRAILPDGYFIEVFMDVPLEVCEARDTKGLYKLARAGKIKGFTGIDDPYEVPLNCEIVLKHNGGFPCEMAEKVLSYLEQKGFLQA Homology
BLAST of Lsi03G010160 vs. ExPASy Swiss-Prot
Match: Q43295 (Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK1 PE=1 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.7e-99 Identity = 187/259 (72.20%), Postives = 208/259 (80.31%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy Swiss-Prot
Match: O49204 (Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus OX=4058 GN=AKN PE=2 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.7e-91 Identity = 171/245 (69.80%), Postives = 198/245 (80.82%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy Swiss-Prot
Match: O49196 (Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK2 PE=1 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 4.1e-87 Identity = 153/213 (71.83%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy Swiss-Prot
Match: Q9SRW7 (Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana OX=3702 GN=APK3 PE=1 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 4.1e-87 Identity = 155/206 (75.24%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy Swiss-Prot
Match: Q84JF0 (Adenylyl-sulfate kinase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APK4 PE=1 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 2.0e-81 Identity = 146/217 (67.28%), Postives = 173/217 (79.72%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy TrEMBL
Match: A0A1S3BYH9 (Adenylyl-sulfate kinase OS=Cucumis melo OX=3656 GN=LOC103494812 PE=3 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 3.7e-155 Identity = 277/296 (93.58%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy TrEMBL
Match: A0A5A7TN80 (Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00500 PE=3 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 3.7e-155 Identity = 277/296 (93.58%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy TrEMBL
Match: A0A5D3DZZ6 (Adenylyl-sulfate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00510 PE=3 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-154 Identity = 276/295 (93.56%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy TrEMBL
Match: A0A0A0KY24 (Adenylyl-sulfate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G000720 PE=3 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.6e-153 Identity = 272/296 (91.89%), Postives = 278/296 (93.92%), Query Frame = 0
BLAST of Lsi03G010160 vs. ExPASy TrEMBL
Match: A0A6J1J8X7 (Adenylyl-sulfate kinase OS=Cucurbita maxima OX=3661 GN=LOC111482821 PE=3 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 2.8e-147 Identity = 259/297 (87.21%), Postives = 276/297 (92.93%), Query Frame = 0
BLAST of Lsi03G010160 vs. NCBI nr
Match: XP_038903366.1 (adenylyl-sulfate kinase 3-like [Benincasa hispida]) HSP 1 Score: 578.2 bits (1489), Expect = 4.1e-161 Identity = 285/296 (96.28%), Postives = 288/296 (97.30%), Query Frame = 0
BLAST of Lsi03G010160 vs. NCBI nr
Match: XP_008454396.1 (PREDICTED: adenylyl-sulfate kinase 3 [Cucumis melo] >XP_008454397.1 PREDICTED: adenylyl-sulfate kinase 3 [Cucumis melo] >KAA0044328.1 adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 557.4 bits (1435), Expect = 7.6e-155 Identity = 277/296 (93.58%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of Lsi03G010160 vs. NCBI nr
Match: TYK29457.1 (adenylyl-sulfate kinase 3 [Cucumis melo var. makuwa]) HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-154 Identity = 276/295 (93.56%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lsi03G010160 vs. NCBI nr
Match: XP_031739526.1 (adenylyl-sulfate kinase 3 [Cucumis sativus] >KGN52751.1 hypothetical protein Csa_014768 [Cucumis sativus]) HSP 1 Score: 551.2 bits (1419), Expect = 5.4e-153 Identity = 272/296 (91.89%), Postives = 278/296 (93.92%), Query Frame = 0
BLAST of Lsi03G010160 vs. NCBI nr
Match: KAG6576911.1 (Adenylyl-sulfate kinase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014937.1 Adenylyl-sulfate kinase 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 531.6 bits (1368), Expect = 4.4e-147 Identity = 263/296 (88.85%), Postives = 272/296 (91.89%), Query Frame = 0
BLAST of Lsi03G010160 vs. TAIR 10
Match: AT2G14750.1 (APS kinase ) HSP 1 Score: 363.2 bits (931), Expect = 1.9e-100 Identity = 187/259 (72.20%), Postives = 208/259 (80.31%), Query Frame = 0
BLAST of Lsi03G010160 vs. TAIR 10
Match: AT3G03900.1 (adenosine-5'-phosphosulfate (APS) kinase 3 ) HSP 1 Score: 322.8 bits (826), Expect = 2.9e-88 Identity = 155/206 (75.24%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Lsi03G010160 vs. TAIR 10
Match: AT4G39940.1 (APS-kinase 2 ) HSP 1 Score: 322.8 bits (826), Expect = 2.9e-88 Identity = 153/213 (71.83%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Lsi03G010160 vs. TAIR 10
Match: AT5G67520.1 (adenosine-5'-phosphosulfate (APS) kinase 4 ) HSP 1 Score: 303.9 bits (777), Expect = 1.4e-82 Identity = 146/217 (67.28%), Postives = 173/217 (79.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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