Lsi03G010130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G010130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cysteine-rich and transmembrane domain-containing protein A-like
Location	chr03: 19501714 .. 19502078 (+)
RNA-Seq Expression	Lsi03G010130
Synteny	Lsi03G010130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTAATTTAATTCACTGTTTCTGTTGTGATTTTGGTGTTTTTGGTGTTGGATCGGAGGGTTTTGTGATGTGCGATTGTAGATCTGTGTGTGTTTTGTGTGTTGATTTAGGGTTTTGGTGGTGGTTTCTTTCTTAGGTTATCCACCAGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGCTATCCTCCGCCCGGTGCTTATCCGCCGCAGGGATATCCCCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAA

mRNA sequence

ATGAGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTAATTTAATTCACTGTTTCTGTTGTGATTTTGGTGTTTTTGGTGTTGGATCGGAGGGTTTTGTGATGTGCGATTGTAGATCTGTGGTTTTGGTGGTGGTTTCTTTCTTAGGTTATCCACCAGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGCTATCCTCCGCCCGGTGCTTATCCGCCGCAGGGATATCCCCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTAATTTAATTCACTGTTTCTGTTGTGATTTTGGTGTTTTTGGTGTTGGATCGGAGGGTTTTGTGATGTGCGATTGTAGATCTGTGGTTTTGGTGGTGGTTTCTTTCTTAGGTTATCCACCAGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGCTATCCTCCGCCCGGTGCTTATCCGCCGCAGGGATATCCCCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCCGGTTGCTTGGAAGGCTGGTAA

Protein sequence

MSQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW

Homology

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BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.0e-16
Identity = 56/116 (48.28%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 2   SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAY 61
           +QPP+GVPPPQ                                     GYPPEGYPKDAY
Sbjct: 5   NQPPVGVPPPQ-------------------------------------GYPPEGYPKDAY 64

Query: 62  PPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEG 108
           PP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEG
Sbjct: 65  PPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-08
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 52  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL 106
           PP+GY PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++G   GCL
Sbjct: 13  PPQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQAPQQKQNAGMLEGCL 69

[Close]

BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.4e-07
Identity = 43/71 (60.56%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 51  YPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPP-YAPQ------YAQ---PPPQQQ 108
           YP EG PKDAYPPPG  YP QGYPPP  YP QGYPP  Y PQ      Y Q   PP QQQ
Sbjct: 16  YPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPEQGYPQQGYPPQQQQ 75

[Close]

BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.9e-07
Identity = 34/50 (68.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 51  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ 97
           YPP+GYP   YPPP   GYPPQGYPP G YPPQGY PPP  P    PPPQ
Sbjct: 383 YPPQGYPPQGYPPPPPQGYPPQGYPPQG-YPPQGYPPPPQGPPPQGPPPQ 431

[Close]

BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot
Match: P24603 (Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.9e-07
Identity = 34/50 (68.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 51  YPPEGYPKDAYPPP---GYPPQGYPPPGAYPPQGY-PPPYAPQYAQPPPQ 97
           YPP+GYP   YPPP   GYPPQGYPP G YPPQGY PPP  P    PPPQ
Sbjct: 390 YPPQGYPPQGYPPPPPQGYPPQGYPPQG-YPPQGYPPPPQGPPPQGPPPQ 438

[Close]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL
Match: A0A5A7TSG5 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00470 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.6e-29
Identity = 72/106 (67.92%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ   +  +   F  F +                   F GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQDLCVDLWFWWFFFFFL-------------------FQGYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 109
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 94

[Close]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL
Match: A0A5D3E0V1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00480 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.9e-27
Identity = 69/106 (65.09%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 109
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 76

[Close]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL
Match: A0A1S3BZB4 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103494821 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 68/105 (64.76%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG 108
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG 75

[Close]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL
Match: A0A0A0KWC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.2e-24
Identity = 68/106 (64.15%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEG 108
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSGPGCLEG
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQHSSGPGCLEG 76

[Close]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL
Match: A0A6J1D5E9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111017767 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-21
Identity = 65/110 (59.09%), Postives = 65/110 (59.09%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDA-- 62
           QPPIGVPPPQ                                     GYPPEGYPKDA  
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  ---YPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG 108
              YPP GYPPQGYPPPGAYP QGYPPPYAPQY QPPPQQQSSGPGCLEG
Sbjct: 68  PQGYPPAGYPPQGYPPPGAYPQQGYPPPYAPQYGQPPPQQQSSGPGCLEG 80

[Close]

BLAST of Lsi03G010130 vs. NCBI nr
Match: KAA0044325.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-28
Identity = 72/106 (67.92%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ   +  +   F  F +                   F GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQDLCVDLWFWWFFFFFL-------------------FQGYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 109
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 94

[Close]

BLAST of Lsi03G010130 vs. NCBI nr
Match: TYK29454.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26
Identity = 69/106 (65.09%), Postives = 69/106 (65.09%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 109
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW 76

[Close]

BLAST of Lsi03G010130 vs. NCBI nr
Match: XP_008454408.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25
Identity = 68/105 (64.76%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG 108
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEG 75

[Close]

BLAST of Lsi03G010130 vs. NCBI nr
Match: XP_011652909.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN52747.1 hypothetical protein Csa_015060 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 6.6e-24
Identity = 68/106 (64.15%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEG 108
           PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ SSGPGCLEG
Sbjct: 68  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQHSSGPGCLEG 76

[Close]

BLAST of Lsi03G010130 vs. NCBI nr
Match: XP_038905303.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 66/106 (62.26%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 3   QPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAYP 62
           QPPIGVPPPQ                                     GYPPEGYPKDAYP
Sbjct: 8   QPPIGVPPPQ-------------------------------------GYPPEGYPKDAYP 67

Query: 63  PPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQ-SSGPGCLEG 108
           PPGYPPQGYPPPGAYPP GYPPPYAPQYAQ PPQQQ SSGPGCLEG
Sbjct: 68  PPGYPPQGYPPPGAYPPPGYPPPYAPQYAQAPPQQQSSSGPGCLEG 76

[Close]

BLAST of Lsi03G010130 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 84.3 bits (207), Expect = 6.4e-17
Identity = 56/116 (48.28%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 2   SQPPIGVPPPQGNLIHCFCCDFGVFGVGSEGFVMCDCRSVVLVVVSFLGYPPEGYPKDAY 61
           +QPP+GVPPPQ                                     GYPPEGYPKDAY
Sbjct: 5   NQPPVGVPPPQ-------------------------------------GYPPEGYPKDAY 64

Query: 62  PPPGYPPQGYP---------PPGAYPPQGYPPPYAPQYAQPPP-QQQSSGPGCLEG 108
           PP GYPPQGYP         P   YP QGYPPPYAPQY  PP  QQQ S PG LEG
Sbjct: 65  PPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Lsi03G010130 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 38/60 (63.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 52  PPEGY-PKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPQYAQPPPQQQSSG--PGCL 106
           PP+GY PKD YPP GYPP GYPPPG    YP QGYPP   PQY+Q P Q+Q++G   GCL
Sbjct: 13  PPQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQAPQQKQNAGMLEGCL 69

[Close]

BLAST of Lsi03G010130 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 36/60 (60.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 48 FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP 96
          F GYPP GY P  AYPP GYP QGY PPPGAYPP GYPP          P AP Y   PP
Sbjct: 13 FHGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPP 72

[Close]

BLAST of Lsi03G010130 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 36/60 (60.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 48 FLGYPPEGY-PKDAYPPPGYPPQGY-PPPGAYPPQGYPP----------PYAPQYAQPPP 96
          F GYPP GY P  AYPP GYP QGY PPPGAYPP GYPP          P AP Y   PP
Sbjct: 13 FHGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPP 72

[Close]

BLAST of Lsi03G010130 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 36/71 (50.70%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 50  GYPPEGYPKDA-YPPP-----GYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YA 103
           GYPP GYP  A YPPP     GYPP GYPPP       YP QGYPPP  PQ       Y 
Sbjct: 23  GYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYPPPQYPQGHPPQYPYQ 82

The following BLAST results are available for this feature:

BLAST of Lsi03G010130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	9.0e-16	48.28	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	3.1e-08	63.33	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	3.4e-07	60.56	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
Q17094	9.9e-07	68.00	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]
P24603	9.9e-07	68.00	Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1	[more]

BLAST of Lsi03G010130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSG5	9.6e-29	67.92	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A5D3E0V1	6.9e-27	65.09	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A1S3BZB4	1.3e-25	64.76	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A0A0KWC5	3.2e-24	64.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1	[more]
A0A6J1D5E9	1.9e-21	59.09	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]

BLAST of Lsi03G010130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044325.1	2.0e-28	67.92	cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v...	[more]
TYK29454.1	1.4e-26	65.09	cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v...	[more]
XP_008454408.1	2.7e-25	64.76	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_011652909.1	6.6e-24	64.15	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]
XP_038905303.1	2.8e-22	62.26	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]

BLAST of Lsi03G010130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	6.4e-17	48.28	proline-rich family protein	[more]
AT5G67600.1	2.2e-09	63.33	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT5G45350.1	1.0e-06	60.00	proline-rich family protein	[more]
AT5G45350.2	1.0e-06	60.00	proline-rich family protein	[more]
AT3G49845.1	1.9e-05	50.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..92
None	No IPR available	PANTHER	PTHR31568:SF57	CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN B-RELATED	coord: 2..108
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G010130.1	Lsi03G010130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane