Lsi03G009060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G009060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr03: 16679053 .. 16682689 (-)
RNA-Seq ExpressionLsi03G009060
SyntenyLsi03G009060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATTCCTAAACGGTTGAAGGGGTTTCTTCTGGTCGACGATTGGTTTTCCATTTTCTTTAGGGGTTCGCACAACTTCTTTCCGATGACAGCTTCTGGTCGACGACAACTTCTGGCCAACGACAACATCACAAAGCAGTAAGTTTTCAAACCCCTCATTAGTTTCGGTATTACTCGGTATATTTCAGACATAAACTAACAAATTGTGAACATACTGTGTTGAAAAATAAGATAAAGGATTTTCACCATTTGCAAACCACTTCAACGTGAAGAAGGAGACAATTGGAAACGAAAATAAACAAAAAATCAGACCTACAACCGGCGACTGAACTCCAAAAATCAGTAAGCATTTAAACCTTATAATCTCTGGTAAAGCATTTCAGAATAGTTGGTTATGGAGTTTCTAAACCCTATAATGTTTTAGTAAACTACAATATATATGTTATCTAAAACTAGTTATTTGCTATATATATGATTTACATGATTATTTGGGATGAGGAGCATGCTTCTTCTGTTCATTAAAGCAAATTTGTTCACCAAACAACACAACTTCAGACTGACTGTTGGAATGTTGAAATTATGTTGTTCGGTACACACTTTGTAAACTCGTTATGTTTCATAACATACAATGTTGCATAAAGAAAATTGTTTTGCATAAAAAAGCAAACTTTATATGTGTGTGAACATATACGATAAATCTATGTATATTTCATTTGTATATCCCCAATATTATGTATATATTGTATACTTTATCTGCCTATTTGAAGACCAATTTTATGTATATATTCAACAATATACTGTGTGCTAATATTTATAGTTACATTTGACGATGTATAAGAACACCATTTGTATATACTTTTGTATTAAACAGTTTATGTATATATTGTATAAATTTAGTTGTCCATACCTTTTAAGGCGTTAAAATATGGCTTGTGTCAAGCTTTTTGGAGAGCGTATTGAAAGGCGCAGAAGCCAATGGAGATTGGGATCCACAAATAGAGTACCACCATCTAATGAGGGGGCACCTATAGTAATCGATGATAGAGAGTTATATTGTCATAAATTTGTCAACTGATGAGTATTTATTAAACTTTAAGCTGTATATTTGACAATTTTGGTTCAATTTTGTAGGATGAACATCAAAAATTGAACAAGATCCCAGAATTCATGGTACCAAATATAGATCCATTCTATAAACACCTACTAGGGAACATTGGTGAAGCGTTTGTGCCAATTATAATAGTTATTCTAGAAGGGGTGGTAGACGATGGGACGAAAACAGTAGGGACACAAATCGTACCATATGATGAATCTTTCCAGGTATCTTTCACATATACTGGTGTATAATTCAAGTTTAATTGTTGTACAATGTTGCTTACTTGTATCATTATTAATATTCAAATAAAATGCAAAGGGAATAAGCATTATACCAGACATTGTAGTGGAAACACTTGGGAAGGAAATGACACCTGATAAGGTATATTGCATATATTAAATTAATATCATATATTCATCAAACAACTTTTATATATGACCTGACAGACAGTTAAATTATTGAAAATTTGATGTTTTATGCAATATATGAATTCTACATGGAAATGAACCAATGGATAACAATGATGGTGAAAACATTCAAATAGAAGAAGATGAAAACCATGGTGATGAGGTATGATGTACTATCATATAATATAAAACATACAATGGTATATTCAAAATAAATTTATTCATTTATTCGATGTAGGGGAATGTCCATCAATCAATAAGGAAACAAACTTCAACCACTAGGAGGGGCAAAAGAACACAAACACCACAAACTAGGAGTGTAAGTTTAATATATACATTTTAATTTGGTTTGTTTTAAATACTAAAAATATTTATGTTATACATTTGAAATTAAATTCAGGAGACAAGTAAGAGGAAAAAAACTTCAGAAGAAAAAAAAAAAACAATGGAAGTATATTTTGTTGGTTGATTTTACTAGTTTATCTAATATTACTAATGATAATATCTTCATCAGGAAACAAGACAAAATAACGCTAGAAAGAAACATGTTGCTAAGAAGGAGACTGAGAAAAAATTTGGAAAAGGGATGACTGGTGGGGGAAGTAGAGATGCACTATATGAGGTATTTACATATACTCTTTTATATATACATTATACCTTTGAATATATATAACATATATGTGTATATGAATCATTCTATCAACATAATTATCCATATTATGAATACTTACAGGTTGCCCCATTGATCCTTAAGCGTAATACGTGATCAAGTGTCCAGAAAATAAACATTTATTCTAGGTTTGATATCTTGATAACCATTCAAGATAAACTTAGTACGGAATACCTTGATATATTTAGGGGGTTGCCTTTTGAGAAGCTTTTAGACCTTAAAATCAGTAAATTCTCTTATTAACTTCTATACCATATAATTAGGAGACAATGCAGCCACACTAGGGAGGATGAGTTATGGTTCAATTTTGAGGGACAAATAGTCCATTTTGGTATGAGAGACTTTGAACAAATCACCAGATTAAACTGTGGAGCACTACTTACACTAGACATGGAGAAACTTAGTAGTAGGTTTTTTAAAAAATATTTCAAACCTGACAAACCTATCAAAAGATCATTTGTCAATAATCTTTTTCAAACAATGAAATGGGTGAAAAATTAAGACAGAGTGAAGTTGGCTAAATTGTACTTTTTGTCAAACTTTTTAATAGGGAAACAAATAAGTTCAGAGGTAGATGTGAACCACATTAAGTTGTTGGATGACGATGATCAGTTTGATAGATACCCATGGGGTAGGCTAGCATATAGCACGACCATAGACTCGGTCAAGAAAGCAATAAAAAATCCAGAAGCTTTGGCTATAGGATTGCAGGATTACCATATGTCTTGCTCATTTGGGCATTTGAGTGCATTCCTTTGCTAACTGGCCCCAGAATAGTTTGTGTACAAGGAATTGATAATGCGGAGGCGAAAATGTTGAACTTGGTAGCTGATGCACACCCAGAGTAAAAGGATCTGGCAGTAAAAGTTTTCGACAATGACGAGGTATGTGAAAAATATGATTTGTATGTGTGACATATTCCCTTGTATATATACATATTTACTAATATAAATTTTTTGTACTGATCTTTAATTGTAGTTTAAATTTCATGTGATGAACTTGGCTGAAGAAGATAATTGAGAAGAGGATACTGGTACAAAGACGTTCTATGAGGGTGAAACATCAAAACAAAAGAATGAAGATGTGGACATTTCGGAGTACTTCTTACATTTTCAAGACATGGTACTTTATAGTTATGAAGTTCTAAATTAAAAAATGGATAAGTTGTTTCAGGAGATCACACATCTTAAGACACGATTGGATGGAAAACAAACAAACACAAATGAAGAACAAGATGGGGACATTAGTGACTACAATGACGATCGAGATGGTGGAAACGGTATTAATGACGAAGAAATTGGTGGAGGGCAAGAACCTGATGAAGATCGAGATGGTGGAAATGGAGGAATAGATATTAATGAAAAACAAAGTGGTGGATGGCAACGAACTGATAAAGCAACGGACAAGCAGGACATAGCTCATCTATTATGGGAGGAGAAACTGAATGTCCAGCTGAAACAGTAA

mRNA sequence

CCAAATTCCTAAACGGTTGAAGGGGTTTCTTCTGGTCGACGATTGGTTTTCCATTTTCTTTAGGGGTTCGCACAACTTCTTTCCGATGACAGCTTCTGGTCGACGACAACTTCTGGCCAACGACAACATCACAAAGCAATAAAGGATTTTCACCATTTGCAAACCACTTCAACGTGAAGAAGGAGACAATTGGAAACGAAAATAAACAAAAAATCAGACCTACAACCGGCGACTGAACTCCAAAAATCAGATGAACATCAAAAATTGAACAAGATCCCAGAATTCATGGTACCAAATATAGATCCATTCTATAAACACCTACTAGGGAACATTGGTGAAGCGTTTGTGCCAATTATAATAGTTATTCTAGAAGGGGTGGTAGACGATGGGACGAAAACAGTAGGGACACAAATCGTACCATATGATGAATCTTTCCAGGAGATCACACATCTTAAGACACGATTGGATGGAAAACAAACAAACACAAATGAAGAACAAGATGGGGACATTAGTGACTACAATGACGATCGAGATGGTGGAAACGGTATTAATGACGAAGAAATTGGTGGAGGGCAAGAACCTGATGAAGATCGAGATGGTGGAAATGGAGGAATAGATATTAATGAAAAACAAAGTGGTGGATGGCAACGAACTGATAAAGCAACGGACAAGCAGGACATAGCTCATCTATTATGGGAGGAGAAACTGAATGTCCAGCTGAAACAGTAA

Coding sequence (CDS)

ATGGTACCAAATATAGATCCATTCTATAAACACCTACTAGGGAACATTGGTGAAGCGTTTGTGCCAATTATAATAGTTATTCTAGAAGGGGTGGTAGACGATGGGACGAAAACAGTAGGGACACAAATCGTACCATATGATGAATCTTTCCAGGAGATCACACATCTTAAGACACGATTGGATGGAAAACAAACAAACACAAATGAAGAACAAGATGGGGACATTAGTGACTACAATGACGATCGAGATGGTGGAAACGGTATTAATGACGAAGAAATTGGTGGAGGGCAAGAACCTGATGAAGATCGAGATGGTGGAAATGGAGGAATAGATATTAATGAAAAACAAAGTGGTGGATGGCAACGAACTGATAAAGCAACGGACAAGCAGGACATAGCTCATCTATTATGGGAGGAGAAACTGAATGTCCAGCTGAAACAGTAA

Protein sequence

MVPNIDPFYKHLLGNIGEAFVPIIIVILEGVVDDGTKTVGTQIVPYDESFQEITHLKTRLDGKQTNTNEEQDGDISDYNDDRDGGNGINDEEIGGGQEPDEDRDGGNGGIDINEKQSGGWQRTDKATDKQDIAHLLWEEKLNVQLKQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..126

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G009060.1Lsi03G009060.1mRNA