
Lsi03G008980 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGACGAATCTTATGAAGAGTGTAGGCTAAGTGCTGGTTTTATCAAAGAATATATATTCCAAGGAGGATGCTTACCCTCGTTAAGTAGAGTAACAACCGCCATGGCTTCTGCATCTAGACTTAGGTATATAATTAATTAAACTATTATTATTATTATTATTATTATTATTATTATTTGAAGAATAATTAATCTATGATTATTAGCTATAAGTTTCATGCTTAATTTCCATCTATTTTACAGCGTGGAGCACTTGGAAAATATTGGAATTCATTACTATCAAACATTGAGGTGTTGGAGAAAGAATTTCTTGAATAATAAAAGGTAAGAGAGCTTTGCTCATATCATCTTGTAAAAAACTATTAATAAATGTGTTTCCAAATTATTGAAATATAAATTATATTTATTTTCAGCAAGATACTCGAACTTGGTTTTGATGAAAGTTTTCTACGAACGTGGGAATACTATTTTGATTATTGTGCAGCTGGTTTTAAATCACGAACTCTTGGAAATTATCAGGTATATGTGTGTTCATGTTGGTGGCTTCAGGAAAATTATACTAACATGTCCTTATTAAAATCTAAAAAAAAAAAAAAAAAGGGAATCCTAAGAATTATAAATTATTATTAATTAATAATGTGTAACTTTATTGCAGATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATACCCATATGAAGAAATACCTTAAGCATTCAACAATTCATTTGAAGGAATGCCTTATTGAATTTCTTTACCCCGACTCCAATAGCAAAGTGTTCCACATCTCTTCTGTATTGCAAAACGTCTAATAATAATAATAATAATAATAATAATATATTTACT ATGCCAGACGAATCTTATGAAGAGTGTAGGCTAAGTGCTGGTTTTATCAAAGAATATATATTCCAAGGAGGATGCTTACCCTCGTTAAGTAGAGTAACAACCGCCATGGCTTCTGCATCTAGACTTAGCGTGGAGCACTTGGAAAATATTGGAATTCATTACTATCAAACATTGAGGTGTTGGAGAAAGAATTTCTTGAATAATAAAAGCAAGATACTCGAACTTGGTTTTGATGAAAGTTTTCTACGAACGTGGGAATACTATTTTGATTATTGTGCAGCTGGTTTTAAATCACGAACTCTTGGAAATTATCAGATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATACCCATATGAAGAAATACCTTAAGCATTCAACAATTCATTTGAAGGAATGCCTTATTGAATTTCTTTACCCCGACTCCAATAGCAAAGTGTTCCACATCTCTTCTGTATTGCAAAACGTCTAATAATAATAATAATAATAATAATAATATATTTACT ATGCCAGACGAATCTTATGAAGAGTGTAGGCTAAGTGCTGGTTTTATCAAAGAATATATATTCCAAGGAGGATGCTTACCCTCGTTAAGTAGAGTAACAACCGCCATGGCTTCTGCATCTAGACTTAGCGTGGAGCACTTGGAAAATATTGGAATTCATTACTATCAAACATTGAGGTGTTGGAGAAAGAATTTCTTGAATAATAAAAGCAAGATACTCGAACTTGGTTTTGATGAAAGTTTTCTACGAACGTGGGAATACTATTTTGATTATTGTGCAGCTGGTTTTAAATCACGAACTCTTGGAAATTATCAGATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATACCCATATGAAGAAATACCTTAA MPDESYEECRLSAGFIKEYIFQGGCLPSLSRVTTAMASASRLSVEHLENIGIHYYQTLRCWRKNFLNNKSKILELGFDESFLRTWEYYFDYCAAGFKSRTLGNYQIVFSRPGNVATFKDPYPYEEIP Homology
BLAST of Lsi03G008980 vs. ExPASy Swiss-Prot
Match: O53732 (Tuberculostearic acid methyltransferase UfaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ufaA1 PE=1 SV=3) HSP 1 Score: 82.0 bits (201), Expect = 5.2e-15 Identity = 41/112 (36.61%), Postives = 56/112 (50.00%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy Swiss-Prot
Match: P0A9H8 (Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=cfa PE=3 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy Swiss-Prot
Match: P0A9H7 (Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) OX=83333 GN=cfa PE=1 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy Swiss-Prot
Match: I1RJD6 (Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=MT1 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05 Identity = 26/93 (27.96%), Postives = 44/93 (47.31%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy Swiss-Prot
Match: I1RNL0 (Sphingolipid C9-methyltransferase 2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=MT2 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05 Identity = 21/77 (27.27%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy TrEMBL
Match: A0A6J1IFX4 (uncharacterized protein LOC111472470 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472470 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.8e-58 Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy TrEMBL
Match: A0A6J1ICH0 (uncharacterized protein LOC111472470 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472470 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.8e-58 Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy TrEMBL
Match: A0A6J1EXS1 (uncharacterized protein LOC111439562 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439562 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy TrEMBL
Match: A0A6J1EY68 (uncharacterized protein LOC111439562 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439562 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Lsi03G008980 vs. ExPASy TrEMBL
Match: A0A6J1IB60 (uncharacterized protein LOC111473008 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473008 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.6e-57 Identity = 108/126 (85.71%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Lsi03G008980 vs. NCBI nr
Match: XP_038888566.1 (uncharacterized protein LOC120078371 [Benincasa hispida]) HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60 Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of Lsi03G008980 vs. NCBI nr
Match: XP_022973880.1 (uncharacterized protein LOC111472470 isoform X2 [Cucurbita maxima]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Lsi03G008980 vs. NCBI nr
Match: XP_022973879.1 (uncharacterized protein LOC111472470 isoform X1 [Cucurbita maxima]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 0
BLAST of Lsi03G008980 vs. NCBI nr
Match: XP_022932947.1 (uncharacterized protein LOC111439562 isoform X2 [Cucurbita moschata]) HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57 Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Lsi03G008980 vs. NCBI nr
Match: XP_022932946.1 (uncharacterized protein LOC111439562 isoform X1 [Cucurbita moschata]) HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57 Identity = 109/127 (85.83%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Lsi03G008980 vs. TAIR 10
Match: AT3G23530.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 202.6 bits (514), Expect = 1.9e-52 Identity = 90/121 (74.38%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Lsi03G008980 vs. TAIR 10
Match: AT3G23510.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 197.2 bits (500), Expect = 7.9e-51 Identity = 86/120 (71.67%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of Lsi03G008980 vs. TAIR 10
Match: AT3G23470.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 196.4 bits (498), Expect = 1.4e-50 Identity = 86/123 (69.92%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Lsi03G008980 vs. TAIR 10
Match: AT3G23480.2 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 193.7 bits (491), Expect = 8.8e-50 Identity = 87/123 (70.73%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Lsi03G008980 vs. TAIR 10
Match: AT3G23480.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 171.0 bits (432), Expect = 6.1e-43 Identity = 75/106 (70.75%), Postives = 92/106 (86.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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