Lsi03G008840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G008840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pectin lyase-like superfamily protein
Location	chr03: 15604713 .. 15606506 (-)
RNA-Seq Expression	Lsi03G008840
Synteny	Lsi03G008840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAGCCCAATGAAGAGCTTAGTCCTCATCATCTTCTTCCATGTGTTCATTCAAATCTCAAGTGCAGGCAGCTACAATGTGATGACTTTGGGTGCCAAACCAGACGGAAAAACCGACTCGACCCGACCATTTCTCAAGGCATGGACATCGGCGTGTAGCTCCTTGACACCATCCACCATCAACGTCCCTAAGGGAAGGTTCTTGCTTACACCCATCACATTTAGAGGTCCATGTAAGAACAAGATTACATTTCGCTTGAATGGAACACTTGTGGCACCTCTTGACTATCGTGCCCTTGGAGATTCTGGGTATTGGATTTTGTTCATCAAAGTTGATGGAGTTGCTTTCGTCGGTGGCAATATTGATGGAAAAGCCACTGGCTATTGGGCTTGCAAGAACTCTGGAAGAAACTGTCCCCCGGGAGCTAGGGTATGTGTTAGCGATTATACTTCATTGCATTCGAAGCAATATCTATCTTTTTGTCCTATATTTCAACTAAACATCAAAAGAATTCAAAAAAATATTTTTTAAACAAAAAATAGCGAGAGCTTATCACATGACAAATTCTTACTAAACAATTGAGTAGCTTTCAAGAAGATGGATGCAGCTGACCAGTAATTTTTTTGGGGCAATAGTTAGATGCAGCAAATGCACCTAATCCCGTACATCCCTCCCTTGTTACACATAAAAGAAAAATTAAAAACAATCCAATTATTGTAACATGACAAATTTTTATTGGACAACCATTTGGGTTGCAAATGCAGTCTAGATAGCACTGAATTTTTTTTTTTTTTTTTTAAAAAAAAAAAATTATTGCCAAGTCTTACACGTTATTTTTCTTTTGACAAATGAAATGCAGTCAATAACATTCAATTGGGCGAACAACATCATAATTAGTGGGTTAACATCAATCAATAGCCAACAAACTCATGTTGTGATCAATAGCTGCAACAATGTTGTGGTGAAGAATGTGAAGATAATGGCTCCAGACCAAAGCCCCAATACTGATGGCATTCATGTGCAATCCTCTACTGGCGTAACTATCACTGGAAGTACCATCAAAACTGGAGATGATTGCATTTCCATTGGAGATGGAACAAAGAATTTGTTTATGAGTGATATAAAATGTGGTCCAGGCCATGGTGTAAGGTAAAAATATATATATGCTCATAAAAATATTATTTAACTTATTATTGGGTAATAAACTAATATGACATTGTTTCAATTCATACAGTATTGGAAGCTTAGGAAAAGAGGTCAACGAAAAGGGAGTTGAAAATGTAACATTGACGAATGCAGTCTTCACAAAATCCGATAATGGTGTGAGGATAAAGGCATGGCCAGCGCCTAGCAATGGTTTCGTAAAACATGTTATCTTTCAGAATATCATTATGAACAATGTTAAAAATCCAATCTTAATTGATCAAAATTATTGTCCCAACAATCAAGGTTGTCCTCTCCAGGTAATAATTTAACTAAATTGTTGGCCTACCTAACCCTCTCTTTACTAATGACAGAAATATATTAATTATTCTTTCCTTCTAATATTTGTTTTAATTTGTTGTTTTAAAGAGTTCTGGAGTGAAGATCAGTGATGTGACATACAAAAATATTGAAGGAACATCAGCAACATCGGAAGCTATAACATTCGATTGCAGCTCTAGCAATCCATGCAGTGACATACGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACATCCTCATGCAAGAACATTGGTGGATCAAGTTTCGGAATGGTCATGCCAGACTCTTGCTTGTAA

mRNA sequence

ATGGCCAGCCCAATGAAGAGCTTAGTCCTCATCATCTTCTTCCATGTGTTCATTCAAATCTCAAGTGCAGGCAGCTACAATGTGATGACTTTGGGTGCCAAACCAGACGGAAAAACCGACTCGACCCGACCATTTCTCAAGGCATGGACATCGGCGTGTAGCTCCTTGACACCATCCACCATCAACGTCCCTAAGGGAAGGTTCTTGCTTACACCCATCACATTTAGAGGTCCATGTAAGAACAAGATTACATTTCGCTTGAATGGAACACTTGTGGCACCTCTTGACTATCGTGCCCTTGGAGATTCTGGGTATTGGATTTTGTTCATCAAAGTTGATGGAGTTGCTTTCGTCGGTGGCAATATTGATGGAAAAGCCACTGGCTATTGGGCTTGCAAGAACTCTGGAAGAAACTGTCCCCCGGGAGCTAGGTCAATAACATTCAATTGGGCGAACAACATCATAATTAGTGGGTTAACATCAATCAATAGCCAACAAACTCATGTTGTGATCAATAGCTGCAACAATGTTGTGGTGAAGAATGTGAAGATAATGGCTCCAGACCAAAGCCCCAATACTGATGGCATTCATGTGCAATCCTCTACTGGCGTAACTATCACTGGAAGTACCATCAAAACTGGAGATGATTGCATTTCCATTGGAGATGGAACAAAGAATTTGTTTATGAGTGATATAAAATGTGGTCCAGGCCATGGTGTAAGTATTGGAAGCTTAGGAAAAGAGGTCAACGAAAAGGGAGTTGAAAATGTAACATTGACGAATGCAGTCTTCACAAAATCCGATAATGGTGTGAGGATAAAGGCATGGCCAGCGCCTAGCAATGGTTTCGTAAAACATGTTATCTTTCAGAATATCATTATGAACAATGTTAAAAATCCAATCTTAATTGATCAAAATTATTGTCCCAACAATCAAGGTTGTCCTCTCCAGAGTTCTGGAGTGAAGATCAGTGATGTGACATACAAAAATATTGAAGGAACATCAGCAACATCGGAAGCTATAACATTCGATTGCAGCTCTAGCAATCCATGCAGTGACATACGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACATCCTCATGCAAGAACATTGGTGGATCAAGTTTCGGAATGGTCATGCCAGACTCTTGCTTGTAA

Coding sequence (CDS)

ATGGCCAGCCCAATGAAGAGCTTAGTCCTCATCATCTTCTTCCATGTGTTCATTCAAATCTCAAGTGCAGGCAGCTACAATGTGATGACTTTGGGTGCCAAACCAGACGGAAAAACCGACTCGACCCGACCATTTCTCAAGGCATGGACATCGGCGTGTAGCTCCTTGACACCATCCACCATCAACGTCCCTAAGGGAAGGTTCTTGCTTACACCCATCACATTTAGAGGTCCATGTAAGAACAAGATTACATTTCGCTTGAATGGAACACTTGTGGCACCTCTTGACTATCGTGCCCTTGGAGATTCTGGGTATTGGATTTTGTTCATCAAAGTTGATGGAGTTGCTTTCGTCGGTGGCAATATTGATGGAAAAGCCACTGGCTATTGGGCTTGCAAGAACTCTGGAAGAAACTGTCCCCCGGGAGCTAGGTCAATAACATTCAATTGGGCGAACAACATCATAATTAGTGGGTTAACATCAATCAATAGCCAACAAACTCATGTTGTGATCAATAGCTGCAACAATGTTGTGGTGAAGAATGTGAAGATAATGGCTCCAGACCAAAGCCCCAATACTGATGGCATTCATGTGCAATCCTCTACTGGCGTAACTATCACTGGAAGTACCATCAAAACTGGAGATGATTGCATTTCCATTGGAGATGGAACAAAGAATTTGTTTATGAGTGATATAAAATGTGGTCCAGGCCATGGTGTAAGTATTGGAAGCTTAGGAAAAGAGGTCAACGAAAAGGGAGTTGAAAATGTAACATTGACGAATGCAGTCTTCACAAAATCCGATAATGGTGTGAGGATAAAGGCATGGCCAGCGCCTAGCAATGGTTTCGTAAAACATGTTATCTTTCAGAATATCATTATGAACAATGTTAAAAATCCAATCTTAATTGATCAAAATTATTGTCCCAACAATCAAGGTTGTCCTCTCCAGAGTTCTGGAGTGAAGATCAGTGATGTGACATACAAAAATATTGAAGGAACATCAGCAACATCGGAAGCTATAACATTCGATTGCAGCTCTAGCAATCCATGCAGTGACATACGATTGCAAGACATAAAGCTTACATATAAAAACAAGGCAGCAACATCCTCATGCAAGAACATTGGTGGATCAAGTTTCGGAATGGTCATGCCAGACTCTTGCTTGTAA

Protein sequence

MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYKNKAATSSCKNIGGSSFGMVMPDSCL

Homology

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BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.7e-123
Identity = 215/385 (55.84%), Postives = 279/385 (72.47%), Query Frame = 0


Query: 7   SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKG 66
           SL LI  F +   I+S  +YNV +LGAK DGKTDST+ FL AW  AC+S+ P  I VP G
Sbjct: 9   SLSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAG 68

Query: 67  RFLLTPITFRGPCKNK-ITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGK 126
            F L  + F GPCKN  ITFR+ GTLVAP DYR +G++  WI F  V+GV   GG +DG+
Sbjct: 69  TFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQ 128

Query: 127 ATGYWACKN-SGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKI 186
            T  WACK   G +CP GA ++ F+ +NNI++SGL S+NSQ  H+VIN   NV ++ V++
Sbjct: 129 GTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRV 188

Query: 187 MAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGS 246
                SPNTDGIHVQ S+GVTI  S I TGDDC+SIG GT NL++  + CGPGHG+SIGS
Sbjct: 189 SRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGS 248

Query: 247 LGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID 306
           LGKE  E GV+NVT+    F+ + NG+RIK+W  PS GF ++++FQ+  M NV+NPI+ID
Sbjct: 249 LGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVID 308

Query: 307 QNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYK 366
           Q+YCP+N+GCP Q SGV+ISDVTY++I GTSAT  A+ FDCS  +PC +I+L+D+KLTYK
Sbjct: 309 QHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYK 368

Query: 367 NKAATSSCKNIGGSSFGMVMPDSCL 390
           N+AA SSC +  G++ G+V P SCL
Sbjct: 369 NQAAESSCSHADGTTEGVVQPTSCL 393

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BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 9.2e-103
Identity = 190/366 (51.91%), Postives = 254/366 (69.40%), Query Frame = 0


Query: 27  NVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKN-KIT 86
           NV++ GAKPDG  DST+ FL AW  AC+S  P+TI VPKGRFL+  + F G  CK   I+
Sbjct: 34  NVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPIS 93

Query: 87  FRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGKATGYWACKNS-GRNCPPGA 146
            R+ G++VAP D+R +  S +WI F  V  V+  GG +D + T  W CKN+ G NCP GA
Sbjct: 94  IRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGA 153

Query: 147 RSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDGIHVQSSTG 206
           +S+ F+ +NNI ISGLTSINSQ+ H+VI++ NNV +  VK+ A + SPNTDGIHV+SS  
Sbjct: 154 KSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHS 213

Query: 207 VTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEVNEKGVENVTLTNAV 266
           V IT S I TGDDCISIG G+ N+F+  I+CGPGHG+SIGSLG+   E+GV+NVT++N  
Sbjct: 214 VHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVD 273

Query: 267 FTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYCPNNQGCPLQSSGVKI 326
           F  ++NGVRIK W   SN F ++++FQ+I M  VKNPI+IDQ+YC  ++ CP Q SGVK+
Sbjct: 274 FMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKV 333

Query: 327 SDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYKNKAATSSCKNIGGSSFGMV 386
           S+V Y++I GTS T  A+  DCS   PC+ I + D+ L   ++ A +SC N  GS+  +V
Sbjct: 334 SNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVV 393

Query: 387 MPDSCL 390
               CL
Sbjct: 394 PFTPCL 398

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BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.3e-88
Identity = 173/385 (44.94%), Postives = 241/385 (62.60%), Query Frame = 0


Query: 9   VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRF 68
           VL++ F    ++ S     V   GAK DGKTD ++PFL AW  AC+S+TPST+ +PKG +
Sbjct: 13  VLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTY 72

Query: 69  LLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNI-DGKAT 128
           LL+ +   GPCK  I   + GT+ AP D  A  D   W+ F  V+     GG I DG+ +
Sbjct: 73  LLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN-WVRFYSVENFKMFGGGIFDGQGS 132

Query: 129 GYWACKNSGRNCPPGAR---SITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKI 188
             +  KN+  N    ++   +I F++  N +I  +TS +S+  H+ + +C N+ ++ +KI
Sbjct: 133 IAYE-KNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKI 192

Query: 189 MAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGS 248
            APD+SPNTDGIH+  S GV I  S IKTGDDCISIGDGTKN+ + +I CGPGHG+SIGS
Sbjct: 193 EAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGS 252

Query: 249 LGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID 308
           LGK  NE+ VE + ++N   T + NG RIK WP    G V  + F++I MNNV +PILID
Sbjct: 253 LGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILID 312

Query: 309 QNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYK 368
           Q YCP N+    + S VK+S++++KNI GTSA  EAI F CS S+PC ++ L DI + + 
Sbjct: 313 QQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHN 372

Query: 369 N-KAATSSCKNIGGSSFGMVMPDSC 389
             + ATS C N+   + G + P  C
Sbjct: 373 GAEPATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.4e-87
Identity = 172/385 (44.68%), Postives = 240/385 (62.34%), Query Frame = 0


Query: 9   VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRF 68
           VL++ F    ++       V   GAK DGKTD ++PFL AW  AC+S+TPST+ +PKG +
Sbjct: 13  VLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTY 72

Query: 69  LLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNI-DGKAT 128
           LL+ +   GPCK  I   + GT+ AP D  A  D   W+ F  V+     GG I DG+ +
Sbjct: 73  LLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN-WVRFYSVENFKMFGGGIFDGQGS 132

Query: 129 GYWACKNSGRNCPPGAR---SITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKI 188
             +  KN+  N    ++   +I F++  N +I  +TS +S+  H+ + +C N+ ++ +KI
Sbjct: 133 IAYE-KNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKI 192

Query: 189 MAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGS 248
            APD+SPNTDGIH+  S GV I  S IKTGDDCISIGDGTKN+ + +I CGPGHG+SIGS
Sbjct: 193 EAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGS 252

Query: 249 LGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID 308
           LGK  NE+ VE + ++N   T + NG RIK WP    G V  + F++I MNNV +PILID
Sbjct: 253 LGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILID 312

Query: 309 QNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYK 368
           Q YCP N+    + S VK+S++++KNI GTSA  EAI F CS S+PC ++ L DI + + 
Sbjct: 313 QQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHN 372

Query: 369 N-KAATSSCKNIGGSSFGMVMPDSC 389
             + ATS C N+   + G + P  C
Sbjct: 373 GAEPATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot
Match: O23147 (Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.6e-78
Identity = 162/370 (43.78%), Postives = 225/370 (60.81%), Query Frame = 0


Query: 23  AGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGR-FLLTPITFRGPCKN 82
           A + +V   GAK DGKTD T+ F KAW  ACS+   +T  VPKG+ +LL    FRGPCK+
Sbjct: 65  ASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRGPCKS 124

Query: 83  KITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGN---IDGKATGYW--ACK-NS 142
              F++ GTL A        D  +W++   V+ ++  GG+   I+G    +W  +CK + 
Sbjct: 125 LRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQNSCKIDK 184

Query: 143 GRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDG 202
            + C     ++T     N+ +  L   N+QQ  + I  CN V V NV+I AP  SPNTDG
Sbjct: 185 SKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDG 244

Query: 203 IHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEVNEKGVE 262
           IH+ ++  + ++ S I TGDDCISI DGT+NL + D+ CGPGHG+SIGSLG + ++  V 
Sbjct: 245 IHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVS 304

Query: 263 NVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYCPNNQGCP 322
            + +  A F++SDNGVRIK +   S G  K++ FQNI M NVKNPI+IDQ+YC  ++ C 
Sbjct: 305 GINVDGAKFSESDNGVRIKTYQGGS-GTAKNIKFQNIRMENVKNPIIIDQDYCDKDK-CE 364

Query: 323 LQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYKNKAATSSCKNI 382
            Q S V++ +V YKNI GTSAT  AIT +CS   PC  I L+++K+    K  T+SCKN 
Sbjct: 365 DQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKI----KGGTASCKNA 424

Query: 383 GGSSFGMVMP 386
              + G V P
Sbjct: 425 NVKNQGTVSP 428

[Close]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL
Match: A0A0A0M0F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G689640 PE=3 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.4e-199
Identity = 341/388 (87.89%), Postives = 364/388 (93.81%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T ST
Sbjct: 1   MANPTKSLVFIVFFHLFIQISTAANYNVISFGAKPDGKTDSTQSFLKAWTSACSSSTRST 60

Query: 61  INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGG 120
           INVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRALGDSGYWILFIKVDGV+FVGG
Sbjct: 61  INVPKGRFLLTPITFRGPCKNKITFLLNGTLVAPLDYRALGDSGYWILFIKVDGVSFVGG 120

Query: 121 NIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVK 180
            IDGK T YWACKNS +NCPPGARSITFNWANNII+SGLTSINSQQTHVVINSCNNVVVK
Sbjct: 121 TIDGKGTAYWACKNSAKNCPPGARSITFNWANNIILSGLTSINSQQTHVVINSCNNVVVK 180

Query: 181 NVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240
           NVKIMAPDQSPNTDGIHVQSST VTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV
Sbjct: 181 NVKIMAPDQSPNTDGIHVQSSTNVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240

Query: 241 SIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP 300
           SIGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Sbjct: 241 SIGSLGKEANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNP 300

Query: 301 ILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIK 360
           ILIDQNYCPN+Q C LQSSGVKI+DVTYK+IEGTSATSEA+TFDCSSSNPCSDI+L+DIK
Sbjct: 301 ILIDQNYCPNHQSCSLQSSGVKINDVTYKSIEGTSATSEAVTFDCSSSNPCSDIKLEDIK 360

Query: 361 LTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           LTYKNK  TSSCKNIGGSS G+V+P++C
Sbjct: 361 LTYKNKTTTSSCKNIGGSSIGLVVPETC 388

[Close]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL
Match: A0A5A7VB33 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00550 PE=3 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193
Identity = 335/389 (86.12%), Postives = 358/389 (92.03%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT ST
Sbjct: 1   MANSRKSLVFIVFFHLFIQISSAGSYNVITFGAKPDGKTDSTQSFLKAWKSACSSLTRST 60

Query: 61  INVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           INVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY ALGDSGYWILF KV+GV+F+G
Sbjct: 61  INVPKGRFLLTAITFRGPCKNNNIIFLLNGTLVAPLDYNALGDSGYWILFTKVNGVSFIG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNIDGK T YWACK SG+ CPPGARSITFNWA+NIIISGLTSINS+QTH+VINSCNNVVV
Sbjct: 121 GNIDGKGTAYWACKGSGKKCPPGARSITFNWASNIIISGLTSINSRQTHIVINSCNNVVV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSSTGVTI+G+TIKTGDDCISIGDGTKNLFMSDIKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTISGTTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Sbjct: 241 VSIGSLGKEVNENGVENVTLVNAVFTKSDNGVRIKTWPTPSNGFVKHVVFENIIMNDVKH 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PILIDQNYCPNNQ C +Q SGVKISDVTYKNIEGTSATSE ITFDCSS +PCS+IRLQDI
Sbjct: 301 PILIDQNYCPNNQRCSVQGSGVKISDVTYKNIEGTSATSEGITFDCSSKSPCSNIRLQDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           KLTYKNKAATSSCKNI GS+ G+V P SC
Sbjct: 361 KLTYKNKAATSSCKNIDGSTIGLVFPQSC 389

[Close]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL
Match: A0A1S3CD98 (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103499553 PE=3 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193
Identity = 335/389 (86.12%), Postives = 358/389 (92.03%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT ST
Sbjct: 1   MANSRKSLVFIVFFHLFIQISSAGSYNVITFGAKPDGKTDSTQSFLKAWKSACSSLTRST 60

Query: 61  INVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           INVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY ALGDSGYWILF KV+GV+F+G
Sbjct: 61  INVPKGRFLLTAITFRGPCKNNNIIFLLNGTLVAPLDYNALGDSGYWILFTKVNGVSFIG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNIDGK T YWACK SG+ CPPGARSITFNWA+NIIISGLTSINS+QTH+VINSCNNVVV
Sbjct: 121 GNIDGKGTAYWACKGSGKKCPPGARSITFNWASNIIISGLTSINSRQTHIVINSCNNVVV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSSTGVTI+G+TIKTGDDCISIGDGTKNLFMSDIKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTISGTTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Sbjct: 241 VSIGSLGKEVNENGVENVTLVNAVFTKSDNGVRIKTWPTPSNGFVKHVVFENIIMNDVKH 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PILIDQNYCPNNQ C +Q SGVKISDVTYKNIEGTSATSE ITFDCSS +PCS+IRLQDI
Sbjct: 301 PILIDQNYCPNNQRCSVQGSGVKISDVTYKNIEGTSATSEGITFDCSSKSPCSNIRLQDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           KLTYKNKAATSSCKNI GS+ G+V P SC
Sbjct: 361 KLTYKNKAATSSCKNIDGSTIGLVFPQSC 389

[Close]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL
Match: A0A6J1EIK0 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434690 PE=3 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 315/390 (80.77%), Postives = 356/390 (91.28%), Query Frame = 0


Query: 1   MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPS 60
           MA  +K+L+LII   + F+Q+SSA +YNV+T GAKP+GKTDSTRPFLKAWTSACSS TPS
Sbjct: 1   MAYTIKTLLLIISSIYFFLQLSSAATYNVITYGAKPNGKTDSTRPFLKAWTSACSSSTPS 60

Query: 61  TINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           TINVPKGRFLL PITFRGPC NKITFRLNGTLVAPLDYRALG SGYWILFIKV+ V+F G
Sbjct: 61  TINVPKGRFLLKPITFRGPCNNKITFRLNGTLVAPLDYRALGSSGYWILFIKVNDVSFFG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNID K   YWAC++SG++CPPGARSITFNWANNII+SGLTS+NS+Q+H+ INSCNNV+V
Sbjct: 121 GNIDAKGASYWACRDSGKDCPPGARSITFNWANNIILSGLTSLNSRQSHITINSCNNVLV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSST VTITG+TI+TGDDCISIGDGTKNLFM+ IKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTDVTITGTTIQTGDDCISIGDGTKNLFMTHIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKE +E+GV+NVTL NAVFTKSDNGVRIK W  P NGFVKHV+FQNI+MNNVKN
Sbjct: 241 VSIGSLGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKN 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PI+IDQNYCP+N+GCP QS+GVKISDVTYKNI GTSATSEAITFDCSS+NPC D+RL+DI
Sbjct: 301 PIIIDQNYCPDNEGCPGQSAGVKISDVTYKNIGGTSATSEAITFDCSSTNPCDDMRLEDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSCL 390
           KLTY NKA+TS+C N+GGSS G++MP SCL
Sbjct: 361 KLTYNNKASTSTCNNVGGSSMGILMPQSCL 390

[Close]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL
Match: A0A6J1JKS6 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486681 PE=3 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.4e-185
Identity = 315/390 (80.77%), Postives = 357/390 (91.54%), Query Frame = 0


Query: 1   MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPS 60
           MA+ +K+L+LII  F+ FIQ+SSA +YNV+T GAKPDGKTDSTRPFLKAWTSAC+S TPS
Sbjct: 1   MANTIKTLLLIISSFYFFIQLSSAATYNVITYGAKPDGKTDSTRPFLKAWTSACTSSTPS 60

Query: 61  TINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           TINVPKGRFLL PITFRGPCKNKITFRLNGTLVAPLD+RALG SGYWILFIKV+ V+F G
Sbjct: 61  TINVPKGRFLLKPITFRGPCKNKITFRLNGTLVAPLDFRALGSSGYWILFIKVNDVSFFG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNID K   YWACK+SG++CPPGARS+TFNWANNI +SGLTSINS+Q+H+ INSCNNV+V
Sbjct: 121 GNIDAKGASYWACKDSGKDCPPGARSLTFNWANNIYLSGLTSINSRQSHITINSCNNVLV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSST VTITG+TI+TGDDCISIGDGTKNLFM+ IKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTDVTITGTTIQTGDDCISIGDGTKNLFMAHIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKE +E+GV+NVTL NAVFTKSDNGVRIK W  P NGFVKHV+F+NIIMNNVKN
Sbjct: 241 VSIGSLGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFENIIMNNVKN 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PI+IDQNYCP+N GCP QS+GVKISDV YKNI GTSATSEA+TFDCSS+NPC ++RL+DI
Sbjct: 301 PIIIDQNYCPDNVGCPGQSAGVKISDVRYKNIGGTSATSEAMTFDCSSTNPCDNVRLEDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSCL 390
           KLTYKNKA+TS+C N+GGSS G++MP SCL
Sbjct: 361 KLTYKNKASTSTCNNVGGSSTGILMPQSCL 390

[Close]

BLAST of Lsi03G008840 vs. NCBI nr
Match: XP_038876456.1 (polygalacturonase-like [Benincasa hispida])

HSP 1 Score: 718.8 bits (1854), Expect = 2.6e-203
Identity = 350/388 (90.21%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           M SPMKSLV IIFFH FIQ+SSAGSYNV+TLGAKPDGKTDST  F+KAW SACSSLTPS 
Sbjct: 1   MGSPMKSLV-IIFFHFFIQLSSAGSYNVITLGAKPDGKTDSTESFMKAWKSACSSLTPSI 60

Query: 61  INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGG 120
           INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYR LG+SGYWILF+KVDGV+F+GG
Sbjct: 61  INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRGLGNSGYWILFVKVDGVSFIGG 120

Query: 121 NIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVK 180
           NIDGKAT YW CKNSG+NCPPGARSITFNWANNIIISGLTSINSQQ+HVVINSCNNVVVK
Sbjct: 121 NIDGKATEYWTCKNSGKNCPPGARSITFNWANNIIISGLTSINSQQSHVVINSCNNVVVK 180

Query: 181 NVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240
           NVKIMAPDQSPNTDGIHVQSST VTI GSTIKTGDDCISIGDGTKNLFM++IKCGPGHGV
Sbjct: 181 NVKIMAPDQSPNTDGIHVQSSTNVTIIGSTIKTGDDCISIGDGTKNLFMTNIKCGPGHGV 240

Query: 241 SIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP 300
           SIGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+FQNIIMNNV+NP
Sbjct: 241 SIGSLGKEVNENGVENVTLMNAVFTKSDNGVRIKTWPTPSNGFVKHVLFQNIIMNNVQNP 300

Query: 301 ILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIK 360
           ILIDQNYCPNNQGCPLQSSGVKISDVTYKNI+GTSATS+AITFDCSSSNPCSDIRLQDIK
Sbjct: 301 ILIDQNYCPNNQGCPLQSSGVKISDVTYKNIKGTSATSKAITFDCSSSNPCSDIRLQDIK 360

Query: 361 LTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           LTYKNKAATSSCKN+ GSS G++MP +C
Sbjct: 361 LTYKNKAATSSCKNVDGSSIGVLMPHTC 387

[Close]

BLAST of Lsi03G008840 vs. NCBI nr
Match: XP_004142576.2 (polygalacturonase [Cucumis sativus] >XP_031745382.1 polygalacturonase-like [Cucumis sativus] >KGN66774.1 hypothetical protein Csa_007167 [Cucumis sativus])

HSP 1 Score: 705.3 bits (1819), Expect = 2.9e-199
Identity = 341/388 (87.89%), Postives = 364/388 (93.81%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T ST
Sbjct: 1   MANPTKSLVFIVFFHLFIQISTAANYNVISFGAKPDGKTDSTQSFLKAWTSACSSSTRST 60

Query: 61  INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGG 120
           INVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRALGDSGYWILFIKVDGV+FVGG
Sbjct: 61  INVPKGRFLLTPITFRGPCKNKITFLLNGTLVAPLDYRALGDSGYWILFIKVDGVSFVGG 120

Query: 121 NIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVK 180
            IDGK T YWACKNS +NCPPGARSITFNWANNII+SGLTSINSQQTHVVINSCNNVVVK
Sbjct: 121 TIDGKGTAYWACKNSAKNCPPGARSITFNWANNIILSGLTSINSQQTHVVINSCNNVVVK 180

Query: 181 NVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240
           NVKIMAPDQSPNTDGIHVQSST VTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV
Sbjct: 181 NVKIMAPDQSPNTDGIHVQSSTNVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240

Query: 241 SIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP 300
           SIGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Sbjct: 241 SIGSLGKEANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNP 300

Query: 301 ILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIK 360
           ILIDQNYCPN+Q C LQSSGVKI+DVTYK+IEGTSATSEA+TFDCSSSNPCSDI+L+DIK
Sbjct: 301 ILIDQNYCPNHQSCSLQSSGVKINDVTYKSIEGTSATSEAVTFDCSSSNPCSDIKLEDIK 360

Query: 361 LTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           LTYKNK  TSSCKNIGGSS G+V+P++C
Sbjct: 361 LTYKNKTTTSSCKNIGGSSIGLVVPETC 388

[Close]

BLAST of Lsi03G008840 vs. NCBI nr
Match: XP_031736043.1 (polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 701.0 bits (1808), Expect = 5.6e-198
Identity = 339/388 (87.37%), Postives = 363/388 (93.56%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T ST
Sbjct: 1   MANPTKSLVFIVFFHLFIQISTAANYNVISFGAKPDGKTDSTQSFLKAWTSACSSSTRST 60

Query: 61  INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGG 120
           INVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRALGDSGYWILFIKVDGV+FVGG
Sbjct: 61  INVPKGRFLLTPITFRGPCKNKITFLLNGTLVAPLDYRALGDSGYWILFIKVDGVSFVGG 120

Query: 121 NIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVK 180
            IDGK T YWACKNS +NCPPGARSITFNWANNII+SGLTSINSQQTHVVINSCNNVVVK
Sbjct: 121 TIDGKGTAYWACKNSAKNCPPGARSITFNWANNIILSGLTSINSQQTHVVINSCNNVVVK 180

Query: 181 NVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240
           NVKIMAPDQSPNTDGIHVQSST VTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV
Sbjct: 181 NVKIMAPDQSPNTDGIHVQSSTNVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGV 240

Query: 241 SIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP 300
           SIGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Sbjct: 241 SIGSLGKEANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNP 300

Query: 301 ILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIK 360
           ILIDQNYCPN+Q C LQSSGVKI+DVTYK+IEGTSATSEA+TFDCSSS+PCSDI+L+DIK
Sbjct: 301 ILIDQNYCPNHQSCSLQSSGVKINDVTYKSIEGTSATSEAVTFDCSSSSPCSDIKLEDIK 360

Query: 361 LTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           LTYKNK   SSCKNIGGSS G+V+P++C
Sbjct: 361 LTYKNKTTISSCKNIGGSSIGLVVPETC 388

[Close]

BLAST of Lsi03G008840 vs. NCBI nr
Match: XP_008460791.1 (PREDICTED: polygalacturonase-like [Cucumis melo] >KAA0063115.1 polygalacturonase-like [Cucumis melo var. makuwa] >TYK00161.1 polygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 684.9 bits (1766), Expect = 4.1e-193
Identity = 335/389 (86.12%), Postives = 358/389 (92.03%), Query Frame = 0


Query: 1   MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPST 60
           MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT ST
Sbjct: 1   MANSRKSLVFIVFFHLFIQISSAGSYNVITFGAKPDGKTDSTQSFLKAWKSACSSLTRST 60

Query: 61  INVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           INVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY ALGDSGYWILF KV+GV+F+G
Sbjct: 61  INVPKGRFLLTAITFRGPCKNNNIIFLLNGTLVAPLDYNALGDSGYWILFTKVNGVSFIG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNIDGK T YWACK SG+ CPPGARSITFNWA+NIIISGLTSINS+QTH+VINSCNNVVV
Sbjct: 121 GNIDGKGTAYWACKGSGKKCPPGARSITFNWASNIIISGLTSINSRQTHIVINSCNNVVV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSSTGVTI+G+TIKTGDDCISIGDGTKNLFMSDIKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTISGTTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Sbjct: 241 VSIGSLGKEVNENGVENVTLVNAVFTKSDNGVRIKTWPTPSNGFVKHVVFENIIMNDVKH 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PILIDQNYCPNNQ C +Q SGVKISDVTYKNIEGTSATSE ITFDCSS +PCS+IRLQDI
Sbjct: 301 PILIDQNYCPNNQRCSVQGSGVKISDVTYKNIEGTSATSEGITFDCSSKSPCSNIRLQDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSC 389
           KLTYKNKAATSSCKNI GS+ G+V P SC
Sbjct: 361 KLTYKNKAATSSCKNIDGSTIGLVFPQSC 389

[Close]

BLAST of Lsi03G008840 vs. NCBI nr
Match: XP_023531904.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 664.1 bits (1712), Expect = 7.5e-187
Identity = 317/390 (81.28%), Postives = 358/390 (91.79%), Query Frame = 0


Query: 1   MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPS 60
           MA+ +K+L+LII  F+ FIQ+SSA ++NV+T GAKPDGKTDSTRPFLKAWTSACSS TPS
Sbjct: 1   MANTIKTLLLIISSFYFFIQLSSAATFNVITYGAKPDGKTDSTRPFLKAWTSACSSSTPS 60

Query: 61  TINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG 120
           TINVPKGRFLL P TFRGPCKNKITFRLNGTLVAPLDYRALG SGYWILFIKV+ V+F G
Sbjct: 61  TINVPKGRFLLNPTTFRGPCKNKITFRLNGTLVAPLDYRALGSSGYWILFIKVNDVSFFG 120

Query: 121 GNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVV 180
           GNID K   YWAC++SG++CPPGARS+TFNWANNI +SGLTS+NS+Q+H+ INSCNNV+V
Sbjct: 121 GNIDAKGASYWACRDSGKDCPPGARSLTFNWANNIYLSGLTSLNSRQSHITINSCNNVLV 180

Query: 181 KNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHG 240
           KNVKIMAPDQSPNTDGIHVQSST VTITG+TI+TGDDCISIGDGTKNLFM+ IKCGPGHG
Sbjct: 181 KNVKIMAPDQSPNTDGIHVQSSTDVTITGTTIQTGDDCISIGDGTKNLFMTHIKCGPGHG 240

Query: 241 VSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN 300
           VSIGSLGKE +E+GV+NVTL NAVFTKSDNGVRIK W  P NGFVKHV+FQNI+MNNVKN
Sbjct: 241 VSIGSLGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKN 300

Query: 301 PILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDI 360
           PI+IDQNYCP+N+GCP QS+GVKISDVTYKNI GTSATSEAITFDCSS+NPC DIRL+DI
Sbjct: 301 PIIIDQNYCPDNEGCPGQSAGVKISDVTYKNIGGTSATSEAITFDCSSTNPCDDIRLEDI 360

Query: 361 KLTYKNKAATSSCKNIGGSSFGMVMPDSCL 390
           KLTYKNKA+TS+C N+GGSS G++MP SCL
Sbjct: 361 KLTYKNKASTSTCNNVGGSSMGVLMPQSCL 390

[Close]

BLAST of Lsi03G008840 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 537.3 bits (1383), Expect = 9.9e-153
Identity = 243/384 (63.28%), Postives = 312/384 (81.25%), Query Frame = 0


Query: 9   VLIIFFHVFIQISS---AGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPK 68
           VL++FF  F+ + S   A +YNV++ GAKPDG+TDST+ FL AW +AC S    T+ VP+
Sbjct: 9   VLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPR 68

Query: 69  GRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGK 128
           G FLL P+ FRGPC+++ITF++ GT+VAP DYR LG+SGYWILF+KV+ ++ +GG +D +
Sbjct: 69  GSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDAR 128

Query: 129 ATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIM 188
              +WAC+ SG++CP GARS+TFNWAN++++SGLTSINSQ TH+VINSCNNV+V+ VK++
Sbjct: 129 GASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLV 188

Query: 189 APDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSL 248
           APDQSPNTDG+HVQ S GVT+T  T  TGDDCISIG GT+NL+MS + CGPGHG+SIGSL
Sbjct: 189 APDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSL 248

Query: 249 GKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ 308
           G++ NE GVEN+TL N+VF+ SDNGVRIK W   S GFV++V+FQN+IM NV+NPI++DQ
Sbjct: 249 GRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQ 308

Query: 309 NYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYKN 368
           NYCP+NQGCP Q SGVKIS V Y+NI+GTS T +A+TFDCS SNPC  IRL DIKLT+  
Sbjct: 309 NYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNG 368

Query: 369 KAATSSCKNIGGSSFGMVMPDSCL 390
           ++ATS+CKNI G   G+VMP  CL
Sbjct: 369 RSATSTCKNIKGVKAGVVMPQGCL 392

[Close]

BLAST of Lsi03G008840 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-138
Identity = 233/384 (60.68%), Postives = 298/384 (77.60%), Query Frame = 0


Query: 7   SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKG 66
           SL+  +   + + IS++  +NV++ GAKPDG TDST  FLKAW  AC S + +T+ VPKG
Sbjct: 9   SLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKG 68

Query: 67  RFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGKA 126
            FLL  ITF GPCK+KITF++ GT++AP DYR  G+SG+WILF KV+  + VGG  D +A
Sbjct: 69  TFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARA 128

Query: 127 TGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIMA 186
            G+W+C+ SG+NCPPG RSI+FN A ++IISG+ S+NSQ TH+ +N C NVVV+NVK++A
Sbjct: 129 NGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVA 188

Query: 187 PDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLG 246
           P  SPNTDG HVQ STGVT TGST++TGDDC++IG GT+NL ++ + CGPGHGVSIGSL 
Sbjct: 189 PGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLA 248

Query: 247 KEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQN 306
           KE+ E GVENVT++++VFT S NGVRIK+W  PSNGFV+ V FQ+++M NV+NPI+IDQN
Sbjct: 249 KELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQN 308

Query: 307 YCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTY-KN 366
           YCP ++GCP + SGVKIS VTYKNI+GTSAT EA+   CS S+PC+ I LQDIKLTY K 
Sbjct: 309 YCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKG 368

Query: 367 KAATSSCKNIGGSSFGMVMPDSCL 390
             ATS C N  G S G++ P SCL
Sbjct: 369 TPATSFCFNAVGKSLGVIQPTSCL 392

[Close]

BLAST of Lsi03G008840 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 485.7 bits (1249), Expect = 3.4e-137
Identity = 232/383 (60.57%), Postives = 294/383 (76.76%), Query Frame = 0


Query: 10  LIIFFHVFIQISSAGS--YNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGR 69
           LI     FI +SS+ S  +NV++ GAKPDG TDST  FLKAW  AC S   +T+ VP G 
Sbjct: 10  LIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGT 69

Query: 70  FLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDGKAT 129
           FLL  ITF GPCK+KITF++ GT+VAP DYR  G+SG WILF KV+  + VGG  D + +
Sbjct: 70  FLLKVITFGGPCKSKITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFDARGS 129

Query: 130 GYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKIMAP 189
           G+W+C+ SG+NCPPG RSI+FN A ++IISG+ S+NSQ +H+ +N C NV V+N++++AP
Sbjct: 130 GFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAP 189

Query: 190 DQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGK 249
             SPNTDG  VQ STGVT+TGST++TGDDC++IG GT+N  +S + CGPGHGVSIGSL K
Sbjct: 190 GDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLAK 249

Query: 250 EVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNY 309
           ++NE GVENVT++++VFT S NGVRIK+W  PS GFV++V FQN+IM NV+NPI+IDQNY
Sbjct: 250 QLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIIIDQNY 309

Query: 310 CPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTY-KNK 369
           CP+NQGCP + SGVKI+ VTYKNI+GTSAT EA+   CS SNPC+ I LQDIKLTY K  
Sbjct: 310 CPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNKGT 369

Query: 370 AATSSCKNIGGSSFGMVMPDSCL 390
            ATS C N  G + G++ P SCL
Sbjct: 370 PATSLCFNAVGKNLGVIQPTSCL 392

[Close]

BLAST of Lsi03G008840 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-129
Identity = 219/385 (56.88%), Postives = 281/385 (72.99%), Query Frame = 0


Query: 7   SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKG 66
           SL++++ F + +  SSA +YN+++ GAKPDGKTDST+ F   W  AC+S+ P TI VPKG
Sbjct: 4   SLLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKG 63

Query: 67  RFLLTPITFRG-PCKNK-ITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDG 126
           RFLL  I F G  CK K +TFR+ GTLVAP DYR +G   YWILF  +DG++  GG +D 
Sbjct: 64  RFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDA 123

Query: 127 KATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCNNVVVKNVKI 186
           +    W+CK SG+NCP GA SI F  + N++ISGLTS+NSQ  HV IN C+NV +  VK+
Sbjct: 124 QGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKV 183

Query: 187 MAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGS 246
            A   SPNTDGIHVQSS+ V+I  S I TGDDC+SIG GT  L++ ++ CGPGHG+SIGS
Sbjct: 184 SADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGS 243

Query: 247 LGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID 306
           LGKE  E GV+N+T+  A FT ++NGVRIK+W  PSNGF K++ FQ+ +MNNV+NPI+ID
Sbjct: 244 LGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVID 303

Query: 307 QNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIRLQDIKLTYK 366
           QNYCP N+ CP Q SG+KISDV + +I GTSAT   +  DCSS  PC+ IR+QD+KLTY+
Sbjct: 304 QNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYR 363

Query: 367 NKAATSSCKNIGGSSFGMVMPDSCL 390
           NK AT+ C + GGS  G   P+SCL
Sbjct: 364 NKPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of Lsi03G008840 vs. TAIR 10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 457.6 bits (1176), Expect = 1.0e-128
Identity = 214/394 (54.31%), Postives = 295/394 (74.87%), Query Frame = 0


Query: 1   MASPMKSLVLIIFF--HVFIQISSA---GSYNVMTLGAKPDGKTDSTRPFLKAWTSACSS 60
           MA+ +     IIFF  ++F  I S+    S+NV   GA+ DG+ D+T+ FL AW+ AC S
Sbjct: 1   MANNISFPCAIIFFSINIFFLIKSSHAMPSFNVQRYGARGDGRADATKSFLTAWSLACGS 60

Query: 61  LTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGV 120
              + + VP+G +L+  + F GPCKN ITF+ +GTLVAP +Y  +G+SGYWILF KV+ +
Sbjct: 61  RARAMVYVPRGTYLVKNLVFWGPCKNIITFKNDGTLVAPANYWDIGNSGYWILFAKVNRI 120

Query: 121 AFVGGNIDGKATGYWACKNSGRNCPPGARSITFNWANNIIISGLTSINSQQTHVVINSCN 180
           +  GG ID +  GYW+C+  G +CP GARSI+F+W NN+++SGL+S NSQ  HV ++  +
Sbjct: 121 SVYGGTIDARGAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSS 180

Query: 181 NVVVKNVKIMAPDQSPNTDGIHVQSSTGVTITGSTIKTGDDCISIGDGTKNLFMSDIKCG 240
           NV ++NV+I AP  SPNTDGIHVQSS+GVTI+G TI TGDDCI++  G++N+++  + CG
Sbjct: 181 NVRIENVRIRAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCG 240

Query: 241 PGHGVSIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMN 300
           PGHG+SIGSLG   NE+GV+NVT+T++VFTK+ NGVRIK W  PS GFV +V+F+N+IMN
Sbjct: 241 PGHGISIGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMN 300

Query: 301 NVKNPILIDQNYCPNNQGCPLQSSGVKISDVTYKNIEGTSATSEAITFDCSSSNPCSDIR 360
           NV+NP++IDQNYCPN +GCP QSSGVKIS VT+ NI+GTS T  A+  DCS SN C+ +R
Sbjct: 301 NVENPVIIDQNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLR 360

Query: 361 LQDIKLTYKNKAATSSCKNIGGSSFGMVMPDSCL 390
           LQDIKLTY  +++ S C+N  G + G+++P +C+
Sbjct: 361 LQDIKLTYMRRSSASYCRNAHGRASGVMVPRNCM 394

The following BLAST results are available for this feature:

BLAST of Lsi03G008840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	4.7e-123	55.84	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	9.2e-103	51.91	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q39786	8.3e-88	44.94	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	1.4e-87	44.68	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
O23147	4.6e-78	43.78	Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1	[more]

BLAST of Lsi03G008840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0F3	1.4e-199	87.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G689640 PE=3 SV=1	[more]
A0A5A7VB33	2.0e-193	86.12	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CD98	2.0e-193	86.12	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103499553 PE=3 SV=1	[more]
A0A6J1EIK0	1.5e-185	80.77	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434690 PE=3 SV=1	[more]
A0A6J1JKS6	3.4e-185	80.77	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486681 PE=3 SV=1	[more]

BLAST of Lsi03G008840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876456.1	2.6e-203	90.21	polygalacturonase-like [Benincasa hispida]	[more]
XP_004142576.2	2.9e-199	87.89	polygalacturonase [Cucumis sativus] >XP_031745382.1 polygalacturonase-like [Cucu...	[more]
XP_031736043.1	5.6e-198	87.37	polygalacturonase-like [Cucumis sativus]	[more]
XP_008460791.1	4.1e-193	86.12	PREDICTED: polygalacturonase-like [Cucumis melo] >KAA0063115.1 polygalacturonase...	[more]
XP_023531904.1	7.5e-187	81.28	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G008840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43890.1	9.9e-153	63.28	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	1.1e-138	60.68	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	3.4e-137	60.57	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	3.4e-129	56.88	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	1.0e-128	54.31	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 318..345 e-value: 4800.0 score: 2.3 coord: 284..305 e-value: 5200.0 score: 2.1 coord: 201..222 e-value: 5.5 score: 15.9 coord: 174..200 e-value: 21.0 score: 14.0 coord: 254..275 e-value: 52.0 score: 12.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 17..387 e-value: 1.2E-114 score: 385.5
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 53..375 e-value: 6.4E-93 score: 311.4
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 231..244
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 8..388
None	No IPR available	PANTHER	PTHR31375:SF31	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 8..388
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 10..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G008840.1	Lsi03G008840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity