Lsi03G008790 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTACATCGTCCGCCGCACGTTTGGTCGTCGGTCGCCACCCACTGCTCCACCTCCTCTGTTGCTTACCTCCATCAACCACTTCACATCCAATATCCAGTCACCACTTTCTTCTCTCTCTATCTTTCTTTTTCTGTCTATCAATTGATTCATAGAATAGTATATTCAAATTGCTATCTATTACAATTAGTCAAATATAAATATATAAAAAAGTAAAGAGACTATGGAAATTAAATATAGTTGTAAAAGGTGAAAAGTGGATTGATAGAAGTGGAGGAAAAGATCCGCAACCAGTTGGAAGCGGTTGATATAATTATGTAGGGTATGTATAGTCTTAGTCTCATCTTCATCTCTCCTTCCCCACTTTTTATCATAACACAACCAATTTTCCTCTGTTCGCATCAAATTCAACACTTCCTTTTCAAAATTCACAATTCCAAATTACCATTCTCAAAACCCTTTTGTTAGCTACAGATATTCATTCATTCACCCTTTTTCCAACCAACCAACCAACCCCATTTTCCTTCTCCTTCCCTCCCTCAGGAACCTTCCACAATTTTCACCTCTAATTTCCTCAATTTGACTTACTGGGTTCATCAACAACAAGGGAAAACCCTAGAATTTCGGCATGGCTTCCTCCAATGTGGAGATGGCATCCACGTCCAACACCAATCCGGATCTCCCGCGCGAGTCCTCTCTTTGTTCTATCTCCACAATTATCGCTGATCTACACCATACTGATCCTTCCAGGAATTTGGTTTCCATGAGCATGGATGACCTGCTTAAGAACATCTATTCCGATGCTCAAACTCACAATCAAGTGCAGGATGAAAATCCCATTATTGGGTCCTCGATCTCGCCTCAAGAGAGTTTTCCGCTGCCTAAGGAATTGAGCACCAGGACTGTGGAGGAGGTCTGGAAGGAGATCGTTGCTGGGGGTGATCAGAGGCGGGAGTCTGCTACGGATCAGGAAATAACCCTTGAAGATTTTCTGTCTAAGGCTGGGGCTGTTTGTGACGATGACGTGAGGGTTCCTGTCATTTCTGAACCTGGGGGTTATGGTGTGGACTCGACGCTTAATAATCAGCTTCAGATTCCGTCGCAGCAGTTGGAAGGTCCCATGGTGGGAGGATATACGAGTGGAATCGATGGGAGAATCGTTGGAGTTGGAAGAGGGAAAAGAAGGGCTGTTGAGGAACCAGTTGACAAGGCCACTCAGCAAAAACAGAGACGGATGATCAAGAACAGGGAATCCGCTGCTCGTTCTCGGGAACGCAAGCAGGTTAGTGATTTCATCTTATATCGAAATTCCTCCTTTATTTTGTCTTTCGTCTTTCTGAGAGGAATAGAGTAATCGAGTTTCGCTACGGGAGTTTTTATTTATCGCGATTTCCTTGTTTCAATGCATCGCTCGTTCTGCAAAAGTGTCGTTATTTTGGTTGTCTTGGAAACTGAGTTCTTGAAGTAGGTTTGGATTTTCTAATTTTTATTTGAATATTCCAACGAGATTTGATTTAATGCGTTTATGTTTAGGCTTATACGCTAGAGCTAGAGTCTCTCGTGGCTCAACTGGAGCAGGAAAATGCAAGGCTATTGAGAGAAGAGGTACCTCTGAATGAAATTTGTGTTATTCTTTCTTTCCGTGGATATTTGATAGTTGTTTTTCACATTTAATCAACTATACTATCACTACATTTTTCACCCCTTCCTTTCAAGCTCTGCCACCCTAATGCCTTTCGATTGGATAACCAGTTAGATTGTGTGTTCTAATGCCCGTTTGTGCCACACTGCCACTCAAGGAGATGACTCTCAAGTGATGCTTGCGATTTTTCTTTTCTTAAATCAGTAATATTCAGTTGGTTCTGTTGTGTTTCTTTCTGAAACTGATGCTTGAGACAAGAGGGAAGGAAAAACCACACTAACCCTGTTGACTTGACTCTAAAGGTGGAGAGGATACTGATCTTGAGATACTTTGCCTGAAAGGTTTTGGAAGTCTCAGAACATAAACAGTCGGAGGGAGATCATATCCAGGGTTTGCTCTTAAAAGGGGTTATTACCAGTTTGAATCATTATCAGGGGGGCAACTAGAAGCTTACCCAGTCATTTCTTCAGGGTTCAGTAAGTTAATTCAGATGCCTGAATTGGCTAAAACATGGTAAACATAAGAAAATTTCTCCAACTATTGTGGATATAAGAAAGTTGCATGTAAGTAGCATAAGCTGGACTTGAACATCAATCATAGCCTCCGGCCCTACTGTGACTGAGATGTTGATTTTTTTATTTTTTATTTTTTGGGATAAAGAAACAATTTCATGAATGAATGAAATAAAGGATTAAAAACTCCAAACACTTTTAGGTGGATTGCAGAAAAAAAAAAAGAACACTCCAAGTGGAGATTAAATAAGAAAAGCTATAAAGAGTAAATGGTTGCTTGTTCTTGCACCAAAAAAAAAAAAAAAAGCAGATGGGAGTACAAGGTCTAGAAAATGATCAAAAGAGTGGGAAACCTCCCTGCAGAGACCGACTGCCTAGCACTCCAAAGAATCCAAAAGAAAGCAGGACTGAAAGCAAGCCAAAGATTCTTTGTAATACCACGAAAAGGATGACCAACCAAAATATTTGCCAGGAGGTGCGGCATGTTATTGGGAAAAGGTAATGACCAACCAAAAGCCTCCTAAATAATAGCTCAAAATCGAGCAAAAGGACATTGCATAGAGATGGCATGGACTCTCTGCATTAGATTCACACATAATGCACTAAGAAGGAGATAAAGCAATATGAGGCATGCACCTTTGTAAATGGTCAACTGTATTAATAGTCCTAATCTCCCAAAGAAAAATTTTGATTTTCTTAGGATAAGTGTCCTTTCAGATCACAGTATAAAGGTTGTGTAGTAGGGGATTGACGGTACCCACTTAATTCTGCATAAGAGATTTAACAGTAAAACACATAGAAGATTTAAGAGACCAAGTCCATGTGTCAGGAGAACTGTGAAGTCTAAAAGTAGACAAAAGGTGGGAAAGATTGAACACGAGAAGATTCAAGAGGCCAAGTCCATGTGTCATGAGAGCTGTGAAGTCTAGAAGTGTCAAAGGTGTGATTGATTGGCCCATTCAGTTCTTTCCATATCAATAAGATTTTGATGAAGGCTCAAGTCCCATGCTTCAGTTGCCACAACCCACTCATCTGCCACCATTGCATATGGATTAGAAGTAAGCCTAAACAAGCAGGGGCATATATTCTCAAAAACACCACAACTTAACCAAGAATCCTTCCAGAATAAAGTAGAATGACCATCACCAAGCTTACATTGAGCACAACTAGCAATCAAGTCCACCGTGTGACAAATATATCTTCAAGGATGTTGATGGTATCACCAGTTTCATTGTTGGAGTTTCTGGCTCTTTGGAGTCCAGCAATGCCCTTAATTTTTTGTCAAGAGGAAGAGAAAGCCATGGCTGAAAATTGGGTTGTATGTCCATCCAAGTTCAAGAAGCATACCAAAGGCTCTGACTCTCCTGAACTTTTGTGTCTATTCATTCTATCACTATTTCACAAATTATTGTTTTCCTTTATTCTGCTAACCCCAAATTCAATATATACTTCTTTGTCACTAGTAACATTATATGCACTATTAATTACATAAAAAATGCCATTCCATGGTCGTAACTTTTGGAACTAGGTCACGATATGCCAATGAGTTCTGCTCATTTTAATAGATTGTTCTTGACTTGTTTGATGACTTTGGTCCGCTGCATGATGGATTCATCTTAGGATTTCTGTATGTGTCGAGTCTAAATCATCATCCATTCAGAAGTTCTGAGGAATCAAATTCTAAATGCAGGCTGAGCACGTCAAGGAACGGTCTAAGCAGGTATGTACTTATTGTTTGA CTACATCGTCCGCCGCACGTTTGGTCGTCGGTCGCCACCCACTGCTCCACCTCCTCTGTTGCTTACCTCCATCAACCACTTCACATCCAATATCCAGTCACCACTTTCTTCTCTCTCTATCTTTCTTTTTCTGTCTATCAATTGATTCATAGAATAGTATATTCAAATTGCTATCTATTACAATTAGTCAAATATAAATATATAAAAAAGTAAAGAGACTATGGAAATTAAATATAGTTGTAAAAGGTGAAAAGTGGATTGATAGAAGTGGAGGAAAAGATCCGCAACCAGTTGGAAGCGGTTGATATAATTATGTAGGGTATGTATAGTCTTAGTCTCATCTTCATCTCTCCTTCCCCACTTTTTATCATAACACAACCAATTTTCCTCTGTTCGCATCAAATTCAACACTTCCTTTTCAAAATTCACAATTCCAAATTACCATTCTCAAAACCCTTTTGTTAGCTACAGATATTCATTCATTCACCCTTTTTCCAACCAACCAACCAACCCCATTTTCCTTCTCCTTCCCTCCCTCAGGAACCTTCCACAATTTTCACCTCTAATTTCCTCAATTTGACTTACTGGGTTCATCAACAACAAGGGAAAACCCTAGAATTTCGGCATGGCTTCCTCCAATGTGGAGATGGCATCCACGTCCAACACCAATCCGGATCTCCCGCGCGAGTCCTCTCTTTGTTCTATCTCCACAATTATCGCTGATCTACACCATACTGATCCTTCCAGGAATTTGGTTTCCATGAGCATGGATGACCTGCTTAAGAACATCTATTCCGATGCTCAAACTCACAATCAAGTGCAGGATGAAAATCCCATTATTGGGTCCTCGATCTCGCCTCAAGAGAGTTTTCCGCTGCCTAAGGAATTGAGCACCAGGACTGTGGAGGAGGTCTGGAAGGAGATCGTTGCTGGGGGTGATCAGAGGCGGGAGTCTGCTACGGATCAGGAAATAACCCTTGAAGATTTTCTGTCTAAGGCTGGGGCTGTTTGTGACGATGACGTGAGGGTTCCTGTCATTTCTGAACCTGGGGGTTATGGTGTGGACTCGACGCTTAATAATCAGCTTCAGATTCCGTCGCAGCAGTTGGAAGGTCCCATGGTGGGAGGATATACGAGTGGAATCGATGGGAGAATCGTTGGAGTTGGAAGAGGGAAAAGAAGGGCTGTTGAGGAACCAGTTGACAAGGCCACTCAGCAAAAACAGAGACGGATGATCAAGAACAGGGAATCCGCTGCTCGTTCTCGGGAACGCAAGCAGGCTTATACGCTAGAGCTAGAGTCTCTCGTGGCTCAACTGGAGCAGGAAAATGCAAGGCTATTGAGAGAAGAGGTACCTCTGAATGAAATTTGTATTGTTCTTGACTTGTTTGATGACTTTGGTCCGCTGCATGATGGATTCATCTTAGGATTTCTGTATGTGTCGAGTCTAAATCATCATCCATTCAGAAGTTCTGAGGAATCAAATTCTAAATGCAGGCTGAGCACGTCAAGGAACGGTCTAAGCAGGTATGTACTTATTGTTTGA ATGGCTTCCTCCAATGTGGAGATGGCATCCACGTCCAACACCAATCCGGATCTCCCGCGCGAGTCCTCTCTTTGTTCTATCTCCACAATTATCGCTGATCTACACCATACTGATCCTTCCAGGAATTTGGTTTCCATGAGCATGGATGACCTGCTTAAGAACATCTATTCCGATGCTCAAACTCACAATCAAGTGCAGGATGAAAATCCCATTATTGGGTCCTCGATCTCGCCTCAAGAGAGTTTTCCGCTGCCTAAGGAATTGAGCACCAGGACTGTGGAGGAGGTCTGGAAGGAGATCGTTGCTGGGGGTGATCAGAGGCGGGAGTCTGCTACGGATCAGGAAATAACCCTTGAAGATTTTCTGTCTAAGGCTGGGGCTGTTTGTGACGATGACGTGAGGGTTCCTGTCATTTCTGAACCTGGGGGTTATGGTGTGGACTCGACGCTTAATAATCAGCTTCAGATTCCGTCGCAGCAGTTGGAAGGTCCCATGGTGGGAGGATATACGAGTGGAATCGATGGGAGAATCGTTGGAGTTGGAAGAGGGAAAAGAAGGGCTGTTGAGGAACCAGTTGACAAGGCCACTCAGCAAAAACAGAGACGGATGATCAAGAACAGGGAATCCGCTGCTCGTTCTCGGGAACGCAAGCAGGCTTATACGCTAGAGCTAGAGTCTCTCGTGGCTCAACTGGAGCAGGAAAATGCAAGGCTATTGAGAGAAGAGGTACCTCTGAATGAAATTTGTATTGTTCTTGACTTGTTTGATGACTTTGGTCCGCTGCATGATGGATTCATCTTAGGATTTCTGTATGTGTCGAGTCTAAATCATCATCCATTCAGAAGTTCTGAGGAATCAAATTCTAAATGCAGGCTGAGCACGTCAAGGAACGGTCTAAGCAGGTATGTACTTATTGTTTGA MASSNVEMASTSNTNPDLPRESSLCSISTIIADLHHTDPSRNLVSMSMDDLLKNIYSDAQTHNQVQDENPIIGSSISPQESFPLPKELSTRTVEEVWKEIVAGGDQRRESATDQEITLEDFLSKAGAVCDDDVRVPVISEPGGYGVDSTLNNQLQIPSQQLEGPMVGGYTSGIDGRIVGVGRGKRRAVEEPVDKATQQKQRRMIKNRESAARSRERKQAYTLELESLVAQLEQENARLLREEVPLNEICIVLDLFDDFGPLHDGFILGFLYVSSLNHHPFRSSEESNSKCRLSTSRNGLSRYVLIV Homology
BLAST of Lsi03G008790 vs. ExPASy Swiss-Prot
Match: Q0JHF1 (bZIP transcription factor 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP12 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.7e-24 Identity = 94/266 (35.34%), Postives = 135/266 (50.75%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy Swiss-Prot
Match: P42777 (G-box-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=GBF4 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.3e-23 Identity = 93/246 (37.80%), Postives = 132/246 (53.66%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy Swiss-Prot
Match: Q9LES3 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=DPBF3 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.5e-19 Identity = 95/274 (34.67%), Postives = 138/274 (50.36%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy Swiss-Prot
Match: Q9C5Q2 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=DPBF4 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy Swiss-Prot
Match: Q69TW5 (bZIP transcription factor 46 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP46 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 84/285 (29.47%), Postives = 133/285 (46.67%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy TrEMBL
Match: A0A6J1JN24 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486694 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 5.3e-117 Identity = 243/308 (78.90%), Postives = 258/308 (83.77%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy TrEMBL
Match: A0A6J1JQ14 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486694 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 7.2e-114 Identity = 238/302 (78.81%), Postives = 252/302 (83.44%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy TrEMBL
Match: A0A6J1DZX2 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025063 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.5e-103 Identity = 215/250 (86.00%), Postives = 229/250 (91.60%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy TrEMBL
Match: A0A6J1DWK8 (G-box-binding factor 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025063 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 5.7e-103 Identity = 214/247 (86.64%), Postives = 227/247 (91.90%), Query Frame = 0
BLAST of Lsi03G008790 vs. ExPASy TrEMBL
Match: A0A6J1JGJ0 (G-box-binding factor 4-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111486694 PE=4 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101 Identity = 209/244 (85.66%), Postives = 221/244 (90.57%), Query Frame = 0
BLAST of Lsi03G008790 vs. NCBI nr
Match: KAG7022589.1 (G-box-binding factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462.2 bits (1188), Expect = 3.4e-126 Identity = 257/303 (84.82%), Postives = 269/303 (88.78%), Query Frame = 0
BLAST of Lsi03G008790 vs. NCBI nr
Match: XP_022989685.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X2 [Cucurbita maxima]) HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116 Identity = 243/308 (78.90%), Postives = 258/308 (83.77%), Query Frame = 0
BLAST of Lsi03G008790 vs. NCBI nr
Match: XP_038887652.1 (bZIP transcription factor 12-like [Benincasa hispida]) HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116 Identity = 223/235 (94.89%), Postives = 229/235 (97.45%), Query Frame = 0
BLAST of Lsi03G008790 vs. NCBI nr
Match: XP_022989684.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-113 Identity = 238/302 (78.81%), Postives = 252/302 (83.44%), Query Frame = 0
BLAST of Lsi03G008790 vs. NCBI nr
Match: XP_022158609.1 (ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 [Momordica charantia]) HSP 1 Score: 386.0 bits (990), Expect = 3.1e-103 Identity = 215/250 (86.00%), Postives = 229/250 (91.60%), Query Frame = 0
BLAST of Lsi03G008790 vs. TAIR 10
Match: AT1G03970.1 (G-box binding factor 4 ) HSP 1 Score: 110.2 bits (274), Expect = 3.1e-24 Identity = 93/246 (37.80%), Postives = 132/246 (53.66%), Query Frame = 0
BLAST of Lsi03G008790 vs. TAIR 10
Match: AT5G44080.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 109.8 bits (273), Expect = 4.0e-24 Identity = 98/281 (34.88%), Postives = 153/281 (54.45%), Query Frame = 0
BLAST of Lsi03G008790 vs. TAIR 10
Match: AT3G56850.1 (ABA-responsive element binding protein 3 ) HSP 1 Score: 96.3 bits (238), Expect = 4.6e-20 Identity = 95/274 (34.67%), Postives = 138/274 (50.36%), Query Frame = 0
BLAST of Lsi03G008790 vs. TAIR 10
Match: AT2G41070.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19 Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 0
BLAST of Lsi03G008790 vs. TAIR 10
Match: AT2G41070.3 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19 Identity = 82/236 (34.75%), Postives = 118/236 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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