Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA
mRNA sequence
ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA
Coding sequence (CDS)
ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA
Protein sequence
MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWNKTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPTPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVLPPF
Homology
BLAST of Lsi03G008760 vs. ExPASy Swiss-Prot
Match:
Q5Q0H2 (Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=FLA19 PE=2 SV=2)
HSP 1 Score: 120.6 bits (301), Expect = 3.7e-26
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 0
Query: 31 SSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSM 90
+ +P +EL+ ++I+R RG LF+NAI TSDL DLL ++ S T FAPTDS LF L M
Sbjct: 28 TGVPLEELERAIAILRVRGRALFANAIITSDLLFDLL---SDESLTLFAPTDSMLFDLDM 87
Query: 91 TQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVN 150
T S Y +TLR H +P RLS+S L LP+ + TLL S + LT+ S +D+I ++
Sbjct: 88 THSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTK--HSSSNDSIFLD 147
Query: 151 GVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSK 210
GV +++PGL+ +HIAVHGL + LPL PS+P+
Sbjct: 148 GVQLLIPGLFDGQHIAVHGLADL----------------LPLTAPSSPNRLV-------- 188
Query: 211 ENRDFTALAAGP 223
D TALA P
Sbjct: 208 --EDSTALAKSP 188
BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match:
A0A0A0KHQ8 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G411210 PE=3 SV=1)
HSP 1 Score: 513.5 bits (1321), Expect = 7.3e-142
Identity = 274/356 (76.97%), Postives = 300/356 (84.27%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQVRM IGL +VA+L+ISL TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1 MAFQVRMMIGLRLHVAILMISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DL LDLLTAA NASFT FAPTDSSLFA++MTQSASAYTATLRYH LPRR S+ DLNRLPS
Sbjct: 61 DLYLDLLTAAPNASFTLFAPTDSSLFAIAMTQSASAYTATLRYHCLPRRFSLFDLNRLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QVPIQTLL SQYVSLTRRLRGS SDAI VNGV++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QVPIQTLLPSQYVSLTRRLRGSSSDAIFVNGVNIVLPGLYYSRHVAVHGLEGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
FPY S PPL F PSAPSSFPP KENRDFT AA SIGISSVFPP+SPSNS N
Sbjct: 181 QFPYYSLPPLSPFLPSAPSSFPP------KENRDFTGPAADRSIGISSVFPPLSPSNSLN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPST-SPVLPPGVSNDLTPSAQNEKAITP 300
KT+DLPFN FLGP+PERS+FQ EPPV SSVSPST SP+LPP VSN++TPS
Sbjct: 241 KTIDLPFNHTFLGPSPERSNFQFEPPVTSSVSPSTISPILPPAVSNEVTPS--------- 300
Query: 301 TPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
TPL S SAAWMMK EDGL+G TV+EY+PS+WM FGF + NS++VDVEDSHPRPNVL
Sbjct: 301 TPLTSTSAAWMMKPEDGLNGETVDEYDPSNWMAFGFTEENSKNVDVEDSHPRPNVL 341
BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match:
A0A5A7UN88 (Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00280 PE=3 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQVRMKIGL +VA+L+ISL TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1 MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61 DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
FPY S PPLP FRPSAPSSFPPE ENRDFT AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300
Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
P MS SAAWM K EDGLSG TVEEYEP +W FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338
BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match:
A0A1S3BM06 (fasciclin-like arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103491315 PE=3 SV=1)
HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQVRMKIGL +VA+L+ISL TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1 MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61 DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
FPY S PPLP FRPSAPSSFPPE ENRDFT AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300
Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
P MS SAAWM K EDGLSG TVEEYEP +W FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338
BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match:
A0A6J1EM74 (uncharacterized protein LOC111434622 OS=Cucurbita moschata OX=3662 GN=LOC111434622 PE=3 SV=1)
HSP 1 Score: 500.7 bits (1288), Expect = 4.9e-138
Identity = 267/360 (74.17%), Postives = 294/360 (81.67%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQ+R KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1 MAFQLRFKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61 DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV I TLL SQYVS+TR RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
G+ Y SPPPL FRPS P SFPP++D GS ENRDFT A SI S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIEESPVSPPISPSSSSN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KTVDLPFNRVFLGPA E+ +F VE P IS SPS SP PP +S+DLTP+ QNE +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300
Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
P SDS MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357
BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match:
A0A6J1JR15 (uncharacterized protein LOC111486689 OS=Cucurbita maxima OX=3661 GN=LOC111486689 PE=3 SV=1)
HSP 1 Score: 498.8 bits (1283), Expect = 1.9e-137
Identity = 266/360 (73.89%), Postives = 293/360 (81.39%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQ+R+KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1 MAFQLRIKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DLQLDLL AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61 DLQLDLLAAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV I TLL SQYVS+TR RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
G+ Y SPPPL FRPS P SFPP++D GS ENRDFT A SI S V PPISPS+ N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIDQSPVSPPISPSSFSN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KTVDLPFNRVFLGPA E+ +F VE P IS SPS SP PP +S+DLTP+ QNE +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300
Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
P SDS MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357
BLAST of Lsi03G008760 vs. NCBI nr
Match:
XP_038888494.1 (uncharacterized protein LOC120078327 [Benincasa hispida])
HSP 1 Score: 572.4 bits (1474), Expect = 2.7e-159
Identity = 300/356 (84.27%), Postives = 321/356 (90.17%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MA QV+M+IGLH +VA L+ISLFFTK SFVSSIP++EL+AMLSIVRARGYNLFSNAITTS
Sbjct: 1 MAVQVQMRIGLHLFVAFLMISLFFTKTSFVSSIPTEELEAMLSIVRARGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DLQLDLLTAAANASFTFFAPTDSSLFAL+MTQSA+AYTATLRYHGLPRRLSVSD NRLPS
Sbjct: 61 DLQLDLLTAAANASFTFFAPTDSSLFALAMTQSAAAYTATLRYHGLPRRLSVSDFNRLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
Q PIQTLL SQYV+LTRRLRGSRSDAISVNGV+VVLPGLYY RH+AVHGLGGILSLHSQI
Sbjct: 121 QSPIQTLLRSQYVTLTRRLRGSRSDAISVNGVNVVLPGLYYSRHVAVHGLGGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
GFPYDSPPPLPLFRPSAPSSFPP ENRDFTA AA VFPPISPSNS N
Sbjct: 181 GFPYDSPPPLPLFRPSAPSSFPP-------ENRDFTAPAA------DRVFPPISPSNSSN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KTVDLPFNRV+LGP PERS+FQVEPPVISSVSPSTSPV+PP +SNDLTPS +NEK ITPT
Sbjct: 241 KTVDLPFNRVYLGPPPERSNFQVEPPVISSVSPSTSPVVPPVISNDLTPSTRNEKEITPT 300
Query: 301 PLMSDSAAWMMKSEDGLSGRTV-EEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
PLMS SAAWM+KSEDGL GRTV EEYEP DWM FGF +GNS++VDVEDSHPRPNVL
Sbjct: 301 PLMSGSAAWMIKSEDGLIGRTVEEEYEPLDWMAFGFTEGNSKNVDVEDSHPRPNVL 343
BLAST of Lsi03G008760 vs. NCBI nr
Match:
XP_011657526.1 (uncharacterized protein LOC105435867 [Cucumis sativus] >KGN47917.1 hypothetical protein Csa_004125 [Cucumis sativus])
HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 274/356 (76.97%), Postives = 300/356 (84.27%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQVRM IGL +VA+L+ISL TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1 MAFQVRMMIGLRLHVAILMISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DL LDLLTAA NASFT FAPTDSSLFA++MTQSASAYTATLRYH LPRR S+ DLNRLPS
Sbjct: 61 DLYLDLLTAAPNASFTLFAPTDSSLFAIAMTQSASAYTATLRYHCLPRRFSLFDLNRLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QVPIQTLL SQYVSLTRRLRGS SDAI VNGV++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QVPIQTLLPSQYVSLTRRLRGSSSDAIFVNGVNIVLPGLYYSRHVAVHGLEGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
FPY S PPL F PSAPSSFPP KENRDFT AA SIGISSVFPP+SPSNS N
Sbjct: 181 QFPYYSLPPLSPFLPSAPSSFPP------KENRDFTGPAADRSIGISSVFPPLSPSNSLN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPST-SPVLPPGVSNDLTPSAQNEKAITP 300
KT+DLPFN FLGP+PERS+FQ EPPV SSVSPST SP+LPP VSN++TPS
Sbjct: 241 KTIDLPFNHTFLGPSPERSNFQFEPPVTSSVSPSTISPILPPAVSNEVTPS--------- 300
Query: 301 TPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
TPL S SAAWMMK EDGL+G TV+EY+PS+WM FGF + NS++VDVEDSHPRPNVL
Sbjct: 301 TPLTSTSAAWMMKPEDGLNGETVDEYDPSNWMAFGFTEENSKNVDVEDSHPRPNVL 341
BLAST of Lsi03G008760 vs. NCBI nr
Match:
XP_008449424.1 (PREDICTED: fasciclin-like arabinogalactan protein 19 [Cucumis melo] >KAA0057322.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa] >TYK13412.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa])
HSP 1 Score: 509.2 bits (1310), Expect = 2.9e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQVRMKIGL +VA+L+ISL TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1 MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61 DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
FPY S PPLP FRPSAPSSFPPE ENRDFT AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300
Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
P MS SAAWM K EDGLSG TVEEYEP +W FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338
BLAST of Lsi03G008760 vs. NCBI nr
Match:
KAG6588822.1 (Fasciclin-like arabinogalactan protein 19, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-137
Identity = 266/360 (73.89%), Postives = 295/360 (81.94%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQ+R+KIG+H YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1 MAFQLRIKIGIHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61 DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV I TLL SQYVS+TR RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
G+ Y SPPPL FRPS P SFPP++D GS ENRDFT A SI S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIDESPVSPPISPSSSSN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KTVDLPFNRVFLGPA E+ +F VE P IS SPS SP PP +S+DLTP+ QNE +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300
Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
P SDS MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357
BLAST of Lsi03G008760 vs. NCBI nr
Match:
XP_022927853.1 (uncharacterized protein LOC111434622 [Cucurbita moschata])
HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-137
Identity = 267/360 (74.17%), Postives = 294/360 (81.67%), Query Frame = 0
Query: 1 MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
MAFQ+R KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1 MAFQLRFKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60
Query: 61 DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61 DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120
Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
QV I TLL SQYVS+TR RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180
Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
G+ Y SPPPL FRPS P SFPP++D GS ENRDFT A SI S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIEESPVSPPISPSSSSN 240
Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
KTVDLPFNRVFLGPA E+ +F VE P IS SPS SP PP +S+DLTP+ QNE +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300
Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
P SDS MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357
BLAST of Lsi03G008760 vs. TAIR 10
Match:
AT1G15190.1 (Fasciclin-like arabinogalactan family protein )
HSP 1 Score: 120.6 bits (301), Expect = 2.7e-27
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 0
Query: 31 SSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSM 90
+ +P +EL+ ++I+R RG LF+NAI TSDL DLL ++ S T FAPTDS LF L M
Sbjct: 28 TGVPLEELERAIAILRVRGRALFANAIITSDLLFDLL---SDESLTLFAPTDSMLFDLDM 87
Query: 91 TQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVN 150
T S Y +TLR H +P RLS+S L LP+ + TLL S + LT+ S +D+I ++
Sbjct: 88 THSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTK--HSSSNDSIFLD 147
Query: 151 GVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSK 210
GV +++PGL+ +HIAVHGL + LPL PS+P+
Sbjct: 148 GVQLLIPGLFDGQHIAVHGLADL----------------LPLTAPSSPNRLV-------- 188
Query: 211 ENRDFTALAAGP 223
D TALA P
Sbjct: 208 --EDSTALAKSP 188
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q5Q0H2 | 3.7e-26 | 41.15 | Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=FLA... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KHQ8 | 7.3e-142 | 76.97 | FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G411210 PE=3 S... | [more] |
A0A5A7UN88 | 1.4e-140 | 76.84 | Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695... | [more] |
A0A1S3BM06 | 1.4e-140 | 76.84 | fasciclin-like arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC10349131... | [more] |
A0A6J1EM74 | 4.9e-138 | 74.17 | uncharacterized protein LOC111434622 OS=Cucurbita moschata OX=3662 GN=LOC1114346... | [more] |
A0A6J1JR15 | 1.9e-137 | 73.89 | uncharacterized protein LOC111486689 OS=Cucurbita maxima OX=3661 GN=LOC111486689... | [more] |
Match Name | E-value | Identity | Description | |
XP_038888494.1 | 2.7e-159 | 84.27 | uncharacterized protein LOC120078327 [Benincasa hispida] | [more] |
XP_011657526.1 | 1.5e-141 | 76.97 | uncharacterized protein LOC105435867 [Cucumis sativus] >KGN47917.1 hypothetical ... | [more] |
XP_008449424.1 | 2.9e-140 | 76.84 | PREDICTED: fasciclin-like arabinogalactan protein 19 [Cucumis melo] >KAA0057322.... | [more] |
KAG6588822.1 | 1.0e-137 | 73.89 | Fasciclin-like arabinogalactan protein 19, partial [Cucurbita argyrosperma subsp... | [more] |
XP_022927853.1 | 1.0e-137 | 74.17 | uncharacterized protein LOC111434622 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT1G15190.1 | 2.7e-27 | 41.15 | Fasciclin-like arabinogalactan family protein | [more] |