Lsi03G008760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G008760
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFAS1 domain-containing protein
Locationchr03: 15111069 .. 15112145 (+)
RNA-Seq ExpressionLsi03G008760
SyntenyLsi03G008760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA

mRNA sequence

ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA

Coding sequence (CDS)

ATGGCGTTTCAAGTCCGAATGAAGATCGGACTTCATCCTTATGTCGCTCTCCTCCTGATTTCCCTCTTCTTCACCAAAAACTCCTTCGTCTCCTCCATTCCTTCTCAAGAGCTTGACGCAATGCTCTCCATTGTCAGAGCTCGAGGCTACAATCTCTTCTCCAACGCCATAACCACTTCCGATCTCCAACTCGATCTCCTCACCGCCGCCGCCAACGCCTCCTTTACCTTCTTCGCCCCTACCGACTCCTCTCTCTTCGCCCTCTCCATGACTCAGTCCGCCTCCGCCTACACCGCTACTCTCCGCTACCACGGCCTCCCTCGCCGTCTCTCTGTTTCCGATCTCAACCGCTTGCCTTCTCAGGTTCCGATCCAAACTCTGCTTCTCTCACAGTATGTTTCTCTCACTCGCCGCCTCCGCGGATCTCGCTCCGACGCCATTTCCGTCAATGGCGTCGATGTTGTTCTCCCTGGATTGTACTACGACCGTCACATTGCGGTCCATGGCTTGGGAGGAATTCTCAGTCTCCATTCTCAGATCGGATTTCCATACGATTCTCCGCCTCCTCTTCCGCTGTTTCGCCCTAGCGCTCCGAGTAGTTTTCCGCCTGAACTCGATCGCGGTTCCAAGGAGAACAGAGATTTCACCGCCCTAGCCGCTGGTCCCTCAATCGGCATCTCCTCCGTATTTCCACCGATTAGTCCGAGTAATTCTTGGAACAAAACTGTTGATCTTCCATTTAATCGTGTATTTCTTGGTCCTGCACCGGAACGATCGCATTTCCAAGTTGAACCGCCGGTAATTTCCTCTGTTTCGCCATCGACGAGTCCTGTACTTCCACCGGGCGTTTCGAATGATTTAACTCCGTCGGCGCAGAATGAGAAGGCGATTACGCCGACGCCATTGATGAGCGACTCGGCAGCGTGGATGATGAAATCGGAAGACGGTTTGAGCGGAAGAACAGTGGAGGAGTATGAGCCGTCGGATTGGATGACGTTTGGATTCATGAAAGGAAATTCAGAAGATGTTGATGTTGAAGATAGTCATCCTCGTCCAAATGTATTGCCGCCTTTTTGA

Protein sequence

MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWNKTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPTPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVLPPF
Homology
BLAST of Lsi03G008760 vs. ExPASy Swiss-Prot
Match: Q5Q0H2 (Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=FLA19 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-26
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 0

Query: 31  SSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSM 90
           + +P +EL+  ++I+R RG  LF+NAI TSDL  DLL   ++ S T FAPTDS LF L M
Sbjct: 28  TGVPLEELERAIAILRVRGRALFANAIITSDLLFDLL---SDESLTLFAPTDSMLFDLDM 87

Query: 91  TQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVN 150
           T S   Y +TLR H +P RLS+S L  LP+   + TLL S  + LT+    S +D+I ++
Sbjct: 88  THSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTK--HSSSNDSIFLD 147

Query: 151 GVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSK 210
           GV +++PGL+  +HIAVHGL  +                LPL  PS+P+           
Sbjct: 148 GVQLLIPGLFDGQHIAVHGLADL----------------LPLTAPSSPNRLV-------- 188

Query: 211 ENRDFTALAAGP 223
              D TALA  P
Sbjct: 208 --EDSTALAKSP 188

BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match: A0A0A0KHQ8 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G411210 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 7.3e-142
Identity = 274/356 (76.97%), Postives = 300/356 (84.27%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQVRM IGL  +VA+L+ISL  TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1   MAFQVRMMIGLRLHVAILMISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DL LDLLTAA NASFT FAPTDSSLFA++MTQSASAYTATLRYH LPRR S+ DLNRLPS
Sbjct: 61  DLYLDLLTAAPNASFTLFAPTDSSLFAIAMTQSASAYTATLRYHCLPRRFSLFDLNRLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QVPIQTLL SQYVSLTRRLRGS SDAI VNGV++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QVPIQTLLPSQYVSLTRRLRGSSSDAIFVNGVNIVLPGLYYSRHVAVHGLEGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
            FPY S PPL  F PSAPSSFPP      KENRDFT  AA  SIGISSVFPP+SPSNS N
Sbjct: 181 QFPYYSLPPLSPFLPSAPSSFPP------KENRDFTGPAADRSIGISSVFPPLSPSNSLN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPST-SPVLPPGVSNDLTPSAQNEKAITP 300
           KT+DLPFN  FLGP+PERS+FQ EPPV SSVSPST SP+LPP VSN++TPS         
Sbjct: 241 KTIDLPFNHTFLGPSPERSNFQFEPPVTSSVSPSTISPILPPAVSNEVTPS--------- 300

Query: 301 TPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
           TPL S SAAWMMK EDGL+G TV+EY+PS+WM FGF + NS++VDVEDSHPRPNVL
Sbjct: 301 TPLTSTSAAWMMKPEDGLNGETVDEYDPSNWMAFGFTEENSKNVDVEDSHPRPNVL 341

BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match: A0A5A7UN88 (Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00280 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQVRMKIGL  +VA+L+ISL  TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1   MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA  YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61  DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
            FPY S PPLP FRPSAPSSFPPE      ENRDFT  AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS          
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300

Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
           P MS SAAWM K EDGLSG TVEEYEP +W  FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338

BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match: A0A1S3BM06 (fasciclin-like arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103491315 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQVRMKIGL  +VA+L+ISL  TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1   MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA  YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61  DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
            FPY S PPLP FRPSAPSSFPPE      ENRDFT  AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS          
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300

Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
           P MS SAAWM K EDGLSG TVEEYEP +W  FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338

BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match: A0A6J1EM74 (uncharacterized protein LOC111434622 OS=Cucurbita moschata OX=3662 GN=LOC111434622 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.9e-138
Identity = 267/360 (74.17%), Postives = 294/360 (81.67%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQ+R KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1   MAFQLRFKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61  DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV I TLL SQYVS+TR  RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ 
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
           G+ Y SPPPL  FRPS P SFPP++D GS ENRDFT   A  SI  S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIEESPVSPPISPSSSSN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KTVDLPFNRVFLGPA E+ +F VE P IS  SPS SP  PP +S+DLTP+ QNE  +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300

Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
           P         SDS   MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357

BLAST of Lsi03G008760 vs. ExPASy TrEMBL
Match: A0A6J1JR15 (uncharacterized protein LOC111486689 OS=Cucurbita maxima OX=3661 GN=LOC111486689 PE=3 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.9e-137
Identity = 266/360 (73.89%), Postives = 293/360 (81.39%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQ+R+KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1   MAFQLRIKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DLQLDLL AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61  DLQLDLLAAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV I TLL SQYVS+TR  RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ 
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
           G+ Y SPPPL  FRPS P SFPP++D GS ENRDFT   A  SI  S V PPISPS+  N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIDQSPVSPPISPSSFSN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KTVDLPFNRVFLGPA E+ +F VE P IS  SPS SP  PP +S+DLTP+ QNE  +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300

Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
           P         SDS   MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357

BLAST of Lsi03G008760 vs. NCBI nr
Match: XP_038888494.1 (uncharacterized protein LOC120078327 [Benincasa hispida])

HSP 1 Score: 572.4 bits (1474), Expect = 2.7e-159
Identity = 300/356 (84.27%), Postives = 321/356 (90.17%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MA QV+M+IGLH +VA L+ISLFFTK SFVSSIP++EL+AMLSIVRARGYNLFSNAITTS
Sbjct: 1   MAVQVQMRIGLHLFVAFLMISLFFTKTSFVSSIPTEELEAMLSIVRARGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DLQLDLLTAAANASFTFFAPTDSSLFAL+MTQSA+AYTATLRYHGLPRRLSVSD NRLPS
Sbjct: 61  DLQLDLLTAAANASFTFFAPTDSSLFALAMTQSAAAYTATLRYHGLPRRLSVSDFNRLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           Q PIQTLL SQYV+LTRRLRGSRSDAISVNGV+VVLPGLYY RH+AVHGLGGILSLHSQI
Sbjct: 121 QSPIQTLLRSQYVTLTRRLRGSRSDAISVNGVNVVLPGLYYSRHVAVHGLGGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
           GFPYDSPPPLPLFRPSAPSSFPP       ENRDFTA AA        VFPPISPSNS N
Sbjct: 181 GFPYDSPPPLPLFRPSAPSSFPP-------ENRDFTAPAA------DRVFPPISPSNSSN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KTVDLPFNRV+LGP PERS+FQVEPPVISSVSPSTSPV+PP +SNDLTPS +NEK ITPT
Sbjct: 241 KTVDLPFNRVYLGPPPERSNFQVEPPVISSVSPSTSPVVPPVISNDLTPSTRNEKEITPT 300

Query: 301 PLMSDSAAWMMKSEDGLSGRTV-EEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
           PLMS SAAWM+KSEDGL GRTV EEYEP DWM FGF +GNS++VDVEDSHPRPNVL
Sbjct: 301 PLMSGSAAWMIKSEDGLIGRTVEEEYEPLDWMAFGFTEGNSKNVDVEDSHPRPNVL 343

BLAST of Lsi03G008760 vs. NCBI nr
Match: XP_011657526.1 (uncharacterized protein LOC105435867 [Cucumis sativus] >KGN47917.1 hypothetical protein Csa_004125 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 1.5e-141
Identity = 274/356 (76.97%), Postives = 300/356 (84.27%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQVRM IGL  +VA+L+ISL  TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1   MAFQVRMMIGLRLHVAILMISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DL LDLLTAA NASFT FAPTDSSLFA++MTQSASAYTATLRYH LPRR S+ DLNRLPS
Sbjct: 61  DLYLDLLTAAPNASFTLFAPTDSSLFAIAMTQSASAYTATLRYHCLPRRFSLFDLNRLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QVPIQTLL SQYVSLTRRLRGS SDAI VNGV++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QVPIQTLLPSQYVSLTRRLRGSSSDAIFVNGVNIVLPGLYYSRHVAVHGLEGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
            FPY S PPL  F PSAPSSFPP      KENRDFT  AA  SIGISSVFPP+SPSNS N
Sbjct: 181 QFPYYSLPPLSPFLPSAPSSFPP------KENRDFTGPAADRSIGISSVFPPLSPSNSLN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPST-SPVLPPGVSNDLTPSAQNEKAITP 300
           KT+DLPFN  FLGP+PERS+FQ EPPV SSVSPST SP+LPP VSN++TPS         
Sbjct: 241 KTIDLPFNHTFLGPSPERSNFQFEPPVTSSVSPSTISPILPPAVSNEVTPS--------- 300

Query: 301 TPLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNVL 356
           TPL S SAAWMMK EDGL+G TV+EY+PS+WM FGF + NS++VDVEDSHPRPNVL
Sbjct: 301 TPLTSTSAAWMMKPEDGLNGETVDEYDPSNWMAFGFTEENSKNVDVEDSHPRPNVL 341

BLAST of Lsi03G008760 vs. NCBI nr
Match: XP_008449424.1 (PREDICTED: fasciclin-like arabinogalactan protein 19 [Cucumis melo] >KAA0057322.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa] >TYK13412.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 509.2 bits (1310), Expect = 2.9e-140
Identity = 272/354 (76.84%), Postives = 297/354 (83.90%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQVRMKIGL  +VA+L+ISL  TK SFVSSIP+QELDAMLS+VRA+GYNLFSNAITTS
Sbjct: 1   MAFQVRMKIGLRLHVAILVISLLLTKTSFVSSIPTQELDAMLSVVRAQGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DL LDLLTAA NASFTFFAPTDSSLFAL+MTQSA  YTATLRYH LPRRLS+SDLNR PS
Sbjct: 61  DLHLDLLTAAPNASFTFFAPTDSSLFALAMTQSAFTYTATLRYHCLPRRLSLSDLNRFPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV IQTLL SQYVSLTRRLRGS SDAI VNG+++VLPGLYY RH+AVHGL GILSLHSQI
Sbjct: 121 QV-IQTLLPSQYVSLTRRLRGSSSDAIFVNGINIVLPGLYYSRHVAVHGLEGILSLHSQI 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
            FPY S PPLP FRPSAPSSFPPE      ENRDFT  AA PSIGISSV PPISPSNS N
Sbjct: 181 QFPYYSLPPLPPFRPSAPSSFPPE------ENRDFTGPAADPSIGISSVSPPISPSNSLN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KT+DLPFN +FLGP+P RS+FQ EPPV+SSVSPSTSP+ PP VSN++TPS          
Sbjct: 241 KTIDLPFNHIFLGPSPGRSNFQFEPPVMSSVSPSTSPIHPPAVSNEVTPS---------M 300

Query: 301 PLMSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPNV 355
           P MS SAAWM K EDGLSG TVEEYEP +W  FGF + NS+++DVEDSHPRPNV
Sbjct: 301 PSMSTSAAWMTKPEDGLSGETVEEYEPLNWTPFGFTEENSKNIDVEDSHPRPNV 338

BLAST of Lsi03G008760 vs. NCBI nr
Match: KAG6588822.1 (Fasciclin-like arabinogalactan protein 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-137
Identity = 266/360 (73.89%), Postives = 295/360 (81.94%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQ+R+KIG+H YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1   MAFQLRIKIGIHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61  DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV I TLL SQYVS+TR  RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ 
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
           G+ Y SPPPL  FRPS P SFPP++D GS ENRDFT   A  SI  S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIDESPVSPPISPSSSSN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KTVDLPFNRVFLGPA E+ +F VE P IS  SPS SP  PP +S+DLTP+ QNE  +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300

Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
           P         SDS   MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357

BLAST of Lsi03G008760 vs. NCBI nr
Match: XP_022927853.1 (uncharacterized protein LOC111434622 [Cucurbita moschata])

HSP 1 Score: 500.7 bits (1288), Expect = 1.0e-137
Identity = 267/360 (74.17%), Postives = 294/360 (81.67%), Query Frame = 0

Query: 1   MAFQVRMKIGLHPYVALLLISLFFTKNSFVSSIPSQELDAMLSIVRARGYNLFSNAITTS 60
           MAFQ+R KIGLH YVALL++S FF KNS V+SIP+QELDAMLSIVRARGYNLFSNAITTS
Sbjct: 1   MAFQLRFKIGLHGYVALLMLSFFFNKNSIVTSIPTQELDAMLSIVRARGYNLFSNAITTS 60

Query: 61  DLQLDLLTAAANASFTFFAPTDSSLFALSMTQSASAYTATLRYHGLPRRLSVSDLNRLPS 120
           DLQLDLL+AA NASFT FAPTDSSLFAL+MTQSAS YTATLRYHGLPRRLSVSDLN LPS
Sbjct: 61  DLQLDLLSAADNASFTLFAPTDSSLFALAMTQSASVYTATLRYHGLPRRLSVSDLNSLPS 120

Query: 121 QVPIQTLLLSQYVSLTRRLRGSRSDAISVNGVDVVLPGLYYDRHIAVHGLGGILSLHSQI 180
           QV I TLL SQYVS+TR  RGSRSDAISVNG++VVLPGLYY RH+ VHGLGGILSLHSQ 
Sbjct: 121 QVAIPTLLRSQYVSVTRCHRGSRSDAISVNGINVVLPGLYYGRHVVVHGLGGILSLHSQN 180

Query: 181 GFPYDSPPPLPLFRPSAPSSFPPELDRGSKENRDFTALAAGPSIGISSVFPPISPSNSWN 240
           G+ Y SPPPL  FRPS P SFPP++D GS ENRDFT   A  SI  S V PPISPS+S N
Sbjct: 181 GYTYGSPPPLSRFRPSGPRSFPPQIDLGSNENRDFTVSPADRSIEESPVSPPISPSSSSN 240

Query: 241 KTVDLPFNRVFLGPAPERSHFQVEPPVISSVSPSTSPVLPPGVSNDLTPSAQNEKAITPT 300
           KTVDLPFNRVFLGPA E+ +F VE P IS  SPS SP  PP +S+DLTP+ QNE  +TPT
Sbjct: 241 KTVDLPFNRVFLGPASEQPNFPVESPAIS--SPSVSPGYPPTISSDLTPTMQNENTVTPT 300

Query: 301 PL-------MSDSAAWMMKSEDGLSGRTVEEYEPSDWMTFGFMKGNSEDVDVEDSHPRPN 354
           P         SDS   MMKSED ++GRTVEEYEP DWM+ GF + NS+D+DVEDSHPRPN
Sbjct: 301 PTPLISGEEASDSGR-MMKSEDDMTGRTVEEYEPLDWMSLGFGERNSDDIDVEDSHPRPN 357

BLAST of Lsi03G008760 vs. TAIR 10
Match: AT1G15190.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-27
Identity = 79/192 (41.15%), Postives = 108/192 (56.25%), Query Frame = 0

Query: 31  SSIPSQELDAMLSIVRARGYNLFSNAITTSDLQLDLLTAAANASFTFFAPTDSSLFALSM 90
           + +P +EL+  ++I+R RG  LF+NAI TSDL  DLL   ++ S T FAPTDS LF L M
Sbjct: 28  TGVPLEELERAIAILRVRGRALFANAIITSDLLFDLL---SDESLTLFAPTDSMLFDLDM 87

Query: 91  TQSASAYTATLRYHGLPRRLSVSDLNRLPSQVPIQTLLLSQYVSLTRRLRGSRSDAISVN 150
           T S   Y +TLR H +P RLS+S L  LP+   + TLL S  + LT+    S +D+I ++
Sbjct: 88  THSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTK--HSSSNDSIFLD 147

Query: 151 GVDVVLPGLYYDRHIAVHGLGGILSLHSQIGFPYDSPPPLPLFRPSAPSSFPPELDRGSK 210
           GV +++PGL+  +HIAVHGL  +                LPL  PS+P+           
Sbjct: 148 GVQLLIPGLFDGQHIAVHGLADL----------------LPLTAPSSPNRLV-------- 188

Query: 211 ENRDFTALAAGP 223
              D TALA  P
Sbjct: 208 --EDSTALAKSP 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5Q0H23.7e-2641.15Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=FLA... [more]
Match NameE-valueIdentityDescription
A0A0A0KHQ87.3e-14276.97FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G411210 PE=3 S... [more]
A0A5A7UN881.4e-14076.84Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BM061.4e-14076.84fasciclin-like arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC10349131... [more]
A0A6J1EM744.9e-13874.17uncharacterized protein LOC111434622 OS=Cucurbita moschata OX=3662 GN=LOC1114346... [more]
A0A6J1JR151.9e-13773.89uncharacterized protein LOC111486689 OS=Cucurbita maxima OX=3661 GN=LOC111486689... [more]
Match NameE-valueIdentityDescription
XP_038888494.12.7e-15984.27uncharacterized protein LOC120078327 [Benincasa hispida][more]
XP_011657526.11.5e-14176.97uncharacterized protein LOC105435867 [Cucumis sativus] >KGN47917.1 hypothetical ... [more]
XP_008449424.12.9e-14076.84PREDICTED: fasciclin-like arabinogalactan protein 19 [Cucumis melo] >KAA0057322.... [more]
KAG6588822.11.0e-13773.89Fasciclin-like arabinogalactan protein 19, partial [Cucurbita argyrosperma subsp... [more]
XP_022927853.11.0e-13774.17uncharacterized protein LOC111434622 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G15190.12.7e-2741.15Fasciclin-like arabinogalactan family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 76..177
e-value: 1.1E-5
score: 34.9
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 50..155
e-value: 4.4E-7
score: 30.2
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 37..160
score: 10.129787
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 29..175
e-value: 6.0E-9
score: 38.2
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 44..174
NoneNo IPR availablePANTHERPTHR33985OS02G0491300 PROTEIN-RELATEDcoord: 11..315
NoneNo IPR availablePANTHERPTHR33985:SF15FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 19coord: 11..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G008760.1Lsi03G008760.1mRNA