Lsi03G008670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G008670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RHOMBOID-like protein 10, chloroplastic
Location	chr03: 14672011 .. 14675428 (+)
RNA-Seq Expression	Lsi03G008670
Synteny	Lsi03G008670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCAACAGTTAGCAGCATAGTGGAGAATGGTCGGAAGTTCCGGTGCCGGACCTTTGGGCTTTCCCTTGTTCCTTGAACCCACTCCCGGTCCCGTTGATCTCTTTGCAACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGTCGCATTACTCATCACATTCGCCTTACCTTCGCTCTCCATTCGTTCGATAAGGTTTTCTCTCTTTCTCTCTACTTTACCATTTTCAGTTTCAATATTCAGAAAAATCCCTTTACCTCCTTTTTGATGACTCGAATTTTGATCTTCTGTTATTTAATTTTTCAATCATTTCGAGATTCGAATTTTGTTTGGTTTTGAAATGTAGTACTGTTAACTGTTGAGAGAGGCGCATTAAATTTCTTGAATTTTGTCTCTCTCTGTATTTTGACCTTGTATATTGTTACTTACGCGTTGCTGCGATGCGTAGGCCGATGCTTTATATGAATGTGGATAGAGAGTTTGGAGGGCTAATGCCGTTTAGAAGGTTTGTGTTTTTAAAGAGGCGATCATTTGCTGCAGTGGTTCTTATTATTAATATTTTGATCGAATACAAAAGTCTGTATTAGTTGTAACCTTCTAACCCCCTCTGAGTCCTCTTGACGCCTTCAATTGTTGTTACTATACGTTGATTCAAAGTAAAGCGACTGAGGGGCTTAAAAACGTTCCAACAAAGGACTTTAGTTTTACCACCCCTTTGAAAACCACTTAGAACCTTATGAAGAGAGATGTTTGAGTGAAGCAAGTGATTGACATTTTTTGTAACAAAGTTAGGGTGAAAAGAGATGTTGGAGGACCTATAAGCCTCTTATGGATGAAAGGAGGTCTAAGTCTCTAGACTAAAGGTTAGAGCCTTGCCTCAAGGCGAGTCTGAACACTTAGCCTCGATAGCCTTTTAAAACATTCGTAAGGGCTTTTGGCGAGGATGTTGGGAACGTTCTATTTGTTAATCCAGAAGTTTTGTGAAAGGTTGGGATCTTAGCCACTAGTATCTATGAAAAGCATCTCATTTAATATATTTAACTTCTTATATTGCTTTACATCACATAAGTTTATGACATTGCCATAATCTTAATTTTTGTTGAACATAGCTTTCTTTGACATAAATCTTTCTCACTTTCTGTACATATAGAAGACCTTATTTGAATTATATTTGGATTAAAAAGTCTCTACAAAATTATTCAATGTGTATTGAGTATTTCAAATTGTTTCTGTAGTGATCTTAACACATTTTCTTCAGTTTCTATTGTCTTTTAATTGGTGTATCTTGGTTCTGTACTTCTTAATTCCATGTCTTTTATGCTGATTGAAGCATAGTAGCACTTCGTAATTAATAATTTCTTTTATTGTCTTGCTCTATTTCTTTTCCAGCAGAAACTTGCTCCTCTCGTTGAAGTCTCTTCTAAAGTGAAGAATGCATGGTGTTCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTTGAAGTTATTTTATCACCCACACATGCTGCTTGTTTGTATTTCTTCAGTGGTGAGGAAACTGGGAGTAGCTTAAAAAATGAGCGGATATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCAAAGATGGACCAATATTCTTCTTGCTGTTAATATTTTGTGAGTTTTATAGTTATTCATCTTCTCTTTGATATAGTTCCTATGATTATGTTATCTGATGTACATCGTTTCTTTTATTCTTCTAATTCCTGCTTATCTTATCTGTTAAACATGTGCTGTGTAATTTCTATAGAGCTTATCTGGCTCAAGTTGCGTCAGAAGGAAAGTTACTCCTATGGGGAGCTAAGGTGATACTTCGGTTACTACAGAGATCATGTTTGGTATATAATTTTGTAACTGTGTTTGTTGGATGTTTACTGCATGATTCACTTATAATTTGCAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCAAATATTGGGCACTTGATGGTATATGGTTCTAATATTTTGTGGCACATGCTGCATTGTTCTTGTCTTCTTTAATGATTGGAAATAAACAGTTGAAAGTTTTCGTTGCAGGTTAATTGTTATTCTTTAAATTCTGTTGGTCCCGCAGTCGAGAAAGTCTCTGGTACTCGGAGATTTCTAGCAGTGTACTTTGCCTCGGCAATTGCAAGTACAACTCGTAATCTCAATAAAATAGCCATGATATTATTAAATACCTTTTTGACTCGATCATTTCAAGAAAATCAGGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCTTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGTATGACTCTTCCTTTTCATTTTGCATACGTGATTTTTTGCAACATGCATGACAGAAAAATAAAAAACCAAAAAGTAAAAAAAGAAAAGGAAGTAGGTATCAGGATGTTGGGTTTTTTTCCTTTTTTTTTCTTTTTCAGTCCAGTTCTTCATGTAAAGGTCTTCTATAAATTTCACTTCCACTACTTCTCTAAAGATTTATTTGAACTCGAGAAACTGCAAACTTTCTTCTTCTTTGAAGATTTTGATTAATTGCATATTTTAGCTCCAGAACTAAGTCAAGCCTGTGGTAAGAAGCTTGGTTATTCATCAGAAAGAAGAAAAAAATTCTCGTCGTAAGAAGGCCACATATTGCTGACATGGGAGAAAAAAATGCTGTCTTTTGATGAATGGTTGGCACTTCCTTTGTACCCAAGTATTTTAATTGAACTTCTGATTCAGGTTGGATCCTTTGCTGTGTTTGTTGCAAGACATAGAAAACTGGTCGGTAGAGGCAAAGAAGATCTTCAGCACATCGCTCAAATAATAATCTTAAATATGGTGTGTTTTCTAATTTCCTTTTCTTTTGTCAGAATGGTAAGAAAAGTGGAAATAGATTATGACAGGATCTTTCAGAATTCTGATCAGTGTGCCTGATAAATTTACTTCAACCATAGGAATCGGTTGGCATTCAGTATTCACTTACAAGCACTTAGAATTGCATCTGTAATTACTGTTCTGTAACGTATAATCTGTTAGTTGCCATTTAACTTTTTGTCCGTTATTAGGAGAATAATACCCATGATCATTTGGTTTGCAGGCTATCGGGATAATGTCTAACGGCATCGATAACTGGGGACATGTAAGTTTGAGGGTAGATGATATTTATTTCTCCCTTGAAGAATACTTAACTTCAGCTAGTGATTTAATTATACTCTCACGTTTTGTGAATAAATGAAAACTATTTTTTGTTGCTACTTGGAAATTGGAAAATGTCCGGTTGTCATAAAGTTTTCTTGATATTGTTGATCCATTAGTAAAATGCTTCAGCATCTCGTGCAAAACCTAAGTCTGGCAATGTTCAATAATTGGAGGTGA

mRNA sequence

ACGCAACAGTTAGCAGCATAGTGGAGAATGGTCGGAAGTTCCGGTGCCGGACCTTTGGGCTTTCCCTTGTTCCTTGAACCCACTCCCGGTCCCGTTGATCTCTTTGCAACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGTCGCATTACTCATCACATTCGCCTTACCTTCGCTCTCCATTCGTTCGATAAGCAGAAACTTGCTCCTCTCGTTGAAGTCTCTTCTAAAGTGAAGAATGCATGGTGTTCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTTGAAGTTATTTTATCACCCACACATGCTGCTTGTTTGTATTTCTTCAGTGGTGAGGAAACTGGGAGTAGCTTAAAAAATGAGCGGATATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCAAAGATGGACCAATATTCTTCTTGCTGTTAATATTTTAGCTTATCTGGCTCAAGTTGCGTCAGAAGGAAAGTTACTCCTATGGGGAGCTAAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCAAATATTGGGCACTTGATGGTTAATTGTTATTCTTTAAATTCTGTTGGTCCCGCAGTCGAGAAAGTCTCTGGTACTCGGAGATTTCTAGCAGTGTACTTTGCCTCGGCAATTGCAAGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCTTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGCTATCGGGATAATGTCTAACGGCATCGATAACTGGGGACATCATCTCGTGCAAAACCTAAGTCTGGCAATGTTCAATAATTGGAGGTGA

Coding sequence (CDS)

ATGGTCGGAAGTTCCGGTGCCGGACCTTTGGGCTTTCCCTTGTTCCTTGAACCCACTCCCGGTCCCGTTGATCTCTTTGCAACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGTCGCATTACTCATCACATTCGCCTTACCTTCGCTCTCCATTCGTTCGATAAGCAGAAACTTGCTCCTCTCGTTGAAGTCTCTTCTAAAGTGAAGAATGCATGGTGTTCAAGAGCTCTCCATTTTCCTGGATTAAATTTTCTTGAAGTTATTTTATCACCCACACATGCTGCTTGTTTGTATTTCTTCAGTGGTGAGGAAACTGGGAGTAGCTTAAAAAATGAGCGGATATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCAAAGATGGACCAATATTCTTCTTGCTGTTAATATTTTAGCTTATCTGGCTCAAGTTGCGTCAGAAGGAAAGTTACTCCTATGGGGAGCTAAGATAAATGGTCTAATTGATCAAGGACAATTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCAAATATTGGGCACTTGATGGTTAATTGTTATTCTTTAAATTCTGTTGGTCCCGCAGTCGAGAAAGTCTCTGGTACTCGGAGATTTCTAGCAGTGTACTTTGCCTCGGCAATTGCAAGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCTTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGCTATCGGGATAATGTCTAACGGCATCGATAACTGGGGACATCATCTCGTGCAAAACCTAAGTCTGGCAATGTTCAATAATTGGAGGTGA

Protein sequence

MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKLAPLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAACLYFFSGEETGSSLKNERISHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLAIGIMSNGIDNWGHHLVQNLSLAMFNNWR

Homology

[Close]

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-50
Identity = 123/276 (44.57%), Postives = 159/276 (57.61%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRITHHIRLTFALHSFDKQKLAPLVEVSSKVKNAWCSRALHFPGLN 85
           FATA S+   H     ++ H+RL F L S   +KL    +  +++K A   R   F G N
Sbjct: 24  FATAASVHACH----HVSRHLRLDFHLRS-SLKKLQHFSD-DARMKFARYQRVFVFNGAN 83

Query: 86  FL----EVILSPTHAACLYFFSGEETGSSLKNER-ISHWKTSNRNPQNDQRWTNILLAVN 145
           FL    ++ LS +     +F  GE   +    E   S+ +TS RN  N +RWTN+LLA+N
Sbjct: 84  FLKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAIN 143

Query: 146 ILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAV 205
           ++ Y+AQ+AS+GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNS+GP  
Sbjct: 144 VIMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTA 203

Query: 206 EKVSGTRRFLAVYFASAIA-------SSSMSYWFCKAPSVGASGAIFGL----------- 257
           E + G +RFLAVY  SA+A        S+MSYWF KAPSVGASGAIFGL           
Sbjct: 204 ESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRH 263

[Close]

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-16
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 132 WTNILLAVNILAYLAQVASEGK-----LLLWGAKINGLIDQGQLWRLVTSSFLHANIGHL 191
           +T + +A+ IL +     + G      L+ +GAK N LI QG+ WRL+T   LH  I HL
Sbjct: 179 FTYLFIALQILMFFLLEINGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHIGIAHL 238

Query: 192 MVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLAIGI 251
             N  +L SVG AVE++ G+ RFL +Y A+ I  S  S+ F   PS GASGAIFG    +
Sbjct: 239 AFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCLGAL 298

Query: 252 MSNGIDN 254
           +   + N
Sbjct: 299 LYVALSN 305

[Close]

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot
Match: Q695U0 (Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 132 WTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCY 191
           W   ++ V +   L  + +   L+ +GA    LI QGQ+WRL+   FLHAN  H+  N +
Sbjct: 71  WIFYIVTVCLDTELPLIPAANILVHFGANYPPLIKQGQVWRLLLPVFLHANFFHVFFNVF 130

Query: 192 SLNSVGPAVEKVSGTRRFLAVYFASAIASS--SMSYWFCKAPSVGASGAIFGLAIGI 247
               +G  +E+  G  +F  +YFASAI  +  S + +FC +  VGAS A FGL IGI
Sbjct: 131 FQLRMGFTIERRYGLLKFTGLYFASAIYGNLLSATAFFCNSLKVGASTAGFGL-IGI 186

[Close]

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.9e-10
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 155 LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYF 214
           LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 215 ASAIASSSMSYWFCKAPSVGASGAIFGL 243
              ++ + MS+     P+VG +G  F L
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFAL 303

[Close]

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot
Match: Q9SSR0 (RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.2e-09
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 158 GAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASA 217
           GA    L+++G+ WRL++  +LH    HLM N  SL  +G  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 218 IASSSMSYWFC------KAPSVGASGAIFGLAIGIMSNGIDNW 255
           +  S +S   C      +  SVGASGA+FGL   ++S  I NW
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNW 193

[Close]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL
Match: A0A6J1HX69 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467054 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 234/292 (80.14%), Postives = 242/292 (82.88%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPT GP+DLFATATSLRLTHSLRRRI HHI LTFALHSFDK KL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDK-KL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEV---ILSPTHAACLYFFSGEETGSSLKNERIS 120
           APLVEVSSK+K+AWCSR LHFPGLNFLEV   ILS THAACLYFF G  TGSSLKNE  S
Sbjct: 61  APLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTS 120

Query: 121 HWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSS 180
           HWKTSNRNPQND+RWTNILL VNILA+LAQVASEGKLLLWG+KIN LIDQGQLWRLVTSS
Sbjct: 121 HWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSS 180

Query: 181 FLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240
           FLHANIGHLMVNCYSLNS+GPAVEK+SGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG
Sbjct: 181 FLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240

Query: 241 AIFGL---------------------------------AIGIMSNGIDNWGH 257
           AIFGL                                 AIGIMS GIDNWGH
Sbjct: 241 AIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGH 291

[Close]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL
Match: A0A6J1HJ61 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464041 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.4e-122
Identity = 232/292 (79.45%), Postives = 243/292 (83.22%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPT GP+DLFATATSLRLTHSLRRRITHHI LTFALHSFDK KL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDK-KL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEV---ILSPTHAACLYFFSGEETGSSLKNERIS 120
           APL+EVSSK+K+AWCSRAL FPGLNFLEV   ILS THAACLYFF G +TGSSLKNE  S
Sbjct: 61  APLIEVSSKLKSAWCSRALRFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEATS 120

Query: 121 HWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSS 180
           HWKTSNRNPQND+RWT ILL VNILA+LAQVASEGKLLLWG+KIN LIDQGQLWRLVTSS
Sbjct: 121 HWKTSNRNPQNDRRWTTILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSS 180

Query: 181 FLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240
           FLHANIGHLMVNCYSLNS+GPAVEK+SGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG
Sbjct: 181 FLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240

Query: 241 AIFGL---------------------------------AIGIMSNGIDNWGH 257
           AIFGL                                 AIG+MS GIDNWGH
Sbjct: 241 AIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGMMSRGIDNWGH 291

[Close]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL
Match: A0A6J1DL86 (RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022158 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 4.1e-105
Identity = 207/292 (70.89%), Postives = 228/292 (78.08%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MV + GA PLGFPL+LEPT  PVDLFATA SLRL   LRRRITHH+ L+F  +SF K K 
Sbjct: 1   MVANYGATPLGFPLYLEPT--PVDLFATAASLRLGRLLRRRITHHLCLSFTHYSFHK-KF 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEV---ILSPTHAACLYFFSGEETGSSLKNERIS 120
           APL ++SSKVK+AWC RALHFPGLNFLEV   I+S  ++ACL+ F G +TG+SL+NER S
Sbjct: 61  APLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLRNERKS 120

Query: 121 HWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSS 180
            WKTSNRNP N+QRWTNILLAVNIL YLAQVAS+GKLLLWGAKINGLIDQGQLWRLVTSS
Sbjct: 121 DWKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSS 180

Query: 181 FLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240
           FLHANIGHLMVNCYSLNS+GPAVEK+SGTRRFLAVYFASAIASSS+SYWFC APSVGASG
Sbjct: 181 FLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASG 240

Query: 241 AIFGL---------------------------------AIGIMSNGIDNWGH 257
           AIFGL                                 AIG+MS GIDNWGH
Sbjct: 241 AIFGLVGSFAVFVVRHRKLVGRGKEDLRHIAHIILLNMAIGMMSTGIDNWGH 289

[Close]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL
Match: A0A7N2RCU7 (Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 8.7e-71
Identity = 151/296 (51.01%), Postives = 191/296 (64.53%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLF-LEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDK-- 60
           MVGS+   PL F +  + P P  ++L  TA    + H L+ R++HH+RL F  HS     
Sbjct: 1   MVGSAFPQPLWFSVSEVGPAPTSLNLITTAGCFHVGHLLQHRVSHHLRLGFLFHSSSSCF 60

Query: 61  -QKLAPLVEVSSKVKNAWCSRALHFPGLNFLEV---ILSPTHAACLYFFSGEETGSSLKN 120
            +K++ L  V  ++K+ WC + L F   NFL++    L+ T++ C  FF+G ET     N
Sbjct: 61  FKKVSRLGHV-PRLKDVWCEKDLQFKEFNFLQLSKDTLTATYSTCSSFFNGGETRKDFGN 120

Query: 121 ERISHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRL 180
           +R SH K S+RN  N +RWTNILLAVN+L ++AQ A++G+L+LWGAKIN LID+GQ WRL
Sbjct: 121 DRASHSKISSRNSFNGRRWTNILLAVNVLIFIAQTATQGQLILWGAKINSLIDKGQFWRL 180

Query: 181 VTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSV 240
           VTSSFLHANIGHLMVNCYSLNS+GP+ E +SG RRFLAVYFASAI+SS MSYWFCKAP+V
Sbjct: 181 VTSSFLHANIGHLMVNCYSLNSLGPSAENISGPRRFLAVYFASAISSSVMSYWFCKAPAV 240

Query: 241 GASGAIFGL---------------------------------AIGIMSNGIDNWGH 257
           GASGAIFGL                                  IG+ S GIDNWGH
Sbjct: 241 GASGAIFGLIGAVAVFATRHRQLVGRGKEDLQHIAQVIVLNMVIGLFSKGIDNWGH 295

[Close]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL
Match: A0A371EEG9 (RHOMBOID-like protein 10, chloroplastic OS=Mucuna pruriens OX=157652 GN=RBL10 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.3e-69
Identity = 155/293 (52.90%), Postives = 184/293 (62.80%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVG     P   P+  +  P P+DL ATA  L   H LRRR THH+RL   LHSF K KL
Sbjct: 1   MVGLDVPQPFLSPV-CKAAPYPLDLIATAACLHFGHLLRRRATHHLRLEVLLHSFFK-KL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAAC---LYFFSGEETGSSLK-NERI 120
           APL  V  ++K+ WC R L   GLN+L+       ++C   L FF+G   G     N  +
Sbjct: 61  APLSHV-LRLKDEWCQRCLQLKGLNYLQPSTGDLTSSCSTSLSFFNGGGHGGHRSGNAGM 120

Query: 121 SHWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTS 180
           S+ K S ++P N ++WT ILL  N+L Y+AQ+A++GKLLLWGAKIN LIDQGQLWRL TS
Sbjct: 121 SNSKMSGKDPFNGRKWTEILLGANVLFYIAQLATQGKLLLWGAKINSLIDQGQLWRLATS 180

Query: 181 SFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGAS 240
           SFLHANIGHL+VNCYSLNSVGP VE   G RRFLAVYF SAIASS+ SYWFC+ P+VGAS
Sbjct: 181 SFLHANIGHLLVNCYSLNSVGPTVESFCGPRRFLAVYFISAIASSATSYWFCRNPAVGAS 240

Query: 241 GAIFGL---------------------------------AIGIMSNGIDNWGH 257
           GAIFGL                                 AIG++SNGIDNWGH
Sbjct: 241 GAIFGLVGSVAVFVLRHKDLVGGGKEDLKHIAQVIALNMAIGLLSNGIDNWGH 290

[Close]

BLAST of Lsi03G008670 vs. NCBI nr
Match: XP_038888169.1 (RHOMBOID-like protein 10, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 471.5 bits (1212), Expect = 5.0e-129
Identity = 243/293 (82.94%), Postives = 245/293 (83.62%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPTP  VDLFATATSLRLTH LRRRITHHIR  F LHSFDKQKL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTPAAVDLFATATSLRLTHFLRRRITHHIRFAFNLHSFDKQKL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAACLYFFSGEETGSSLKNERISHWK 120
           AP++E SSKVKNAWCS ALHFPGLNFLEVILS THAACLYFF G ETGSSLKNERISHWK
Sbjct: 61  APVIEFSSKVKNAWCSSALHFPGLNFLEVILSSTHAACLYFFGGGETGSSLKNERISHWK 120

Query: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180
           TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH
Sbjct: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180

Query: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240
           ANIGHLMVNCYSLNSVGPAVEKVSGT RFLAVYFASAIASSSMSYWFCKAPSVGASGAIF
Sbjct: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240

Query: 241 GL---------------------------------AIGIMSNGIDNWGHHLVQ 261
           GL                                 AIGIMS GIDNWGHH  Q
Sbjct: 241 GLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGHHCKQ 293

[Close]

BLAST of Lsi03G008670 vs. NCBI nr
Match: XP_038888170.1 (RHOMBOID-like protein 10, chloroplastic isoform X4 [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 241/289 (83.39%), Postives = 243/289 (84.08%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPTP  VDLFATATSLRLTH LRRRITHHIR  F LHSFDKQKL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTPAAVDLFATATSLRLTHFLRRRITHHIRFAFNLHSFDKQKL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAACLYFFSGEETGSSLKNERISHWK 120
           AP++E SSKVKNAWCS ALHFPGLNFLEVILS THAACLYFF G ETGSSLKNERISHWK
Sbjct: 61  APVIEFSSKVKNAWCSSALHFPGLNFLEVILSSTHAACLYFFGGGETGSSLKNERISHWK 120

Query: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180
           TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH
Sbjct: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180

Query: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240
           ANIGHLMVNCYSLNSVGPAVEKVSGT RFLAVYFASAIASSSMSYWFCKAPSVGASGAIF
Sbjct: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240

Query: 241 GL---------------------------------AIGIMSNGIDNWGH 257
           GL                                 AIGIMS GIDNWGH
Sbjct: 241 GLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGH 289

[Close]

BLAST of Lsi03G008670 vs. NCBI nr
Match: XP_038888167.1 (RHOMBOID-like protein 10, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 241/289 (83.39%), Postives = 243/289 (84.08%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPTP  VDLFATATSLRLTH LRRRITHHIR  F LHSFDKQKL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTPAAVDLFATATSLRLTHFLRRRITHHIRFAFNLHSFDKQKL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAACLYFFSGEETGSSLKNERISHWK 120
           AP++E SSKVKNAWCS ALHFPGLNFLEVILS THAACLYFF G ETGSSLKNERISHWK
Sbjct: 61  APVIEFSSKVKNAWCSSALHFPGLNFLEVILSSTHAACLYFFGGGETGSSLKNERISHWK 120

Query: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180
           TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH
Sbjct: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180

Query: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240
           ANIGHLMVNCYSLNSVGPAVEKVSGT RFLAVYFASAIASSSMSYWFCKAPSVGASGAIF
Sbjct: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240

Query: 241 GL---------------------------------AIGIMSNGIDNWGH 257
           GL                                 AIGIMS GIDNWGH
Sbjct: 241 GLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGH 289

[Close]

BLAST of Lsi03G008670 vs. NCBI nr
Match: XP_038888168.1 (RHOMBOID-like protein 10, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 8.8e-126
Identity = 240/289 (83.04%), Postives = 242/289 (83.74%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPTP  VDLFATATSLRLTH LRRRITHHIR  F LHSFDK KL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTPAAVDLFATATSLRLTHFLRRRITHHIRFAFNLHSFDK-KL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEVILSPTHAACLYFFSGEETGSSLKNERISHWK 120
           AP++E SSKVKNAWCS ALHFPGLNFLEVILS THAACLYFF G ETGSSLKNERISHWK
Sbjct: 61  APVIEFSSKVKNAWCSSALHFPGLNFLEVILSSTHAACLYFFGGGETGSSLKNERISHWK 120

Query: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180
           TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH
Sbjct: 121 TSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLH 180

Query: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240
           ANIGHLMVNCYSLNSVGPAVEKVSGT RFLAVYFASAIASSSMSYWFCKAPSVGASGAIF
Sbjct: 181 ANIGHLMVNCYSLNSVGPAVEKVSGTWRFLAVYFASAIASSSMSYWFCKAPSVGASGAIF 240

Query: 241 GL---------------------------------AIGIMSNGIDNWGH 257
           GL                                 AIGIMS GIDNWGH
Sbjct: 241 GLVGSFAVFVARHRKLVGRGKEDLRHIAQIIILNMAIGIMSRGIDNWGH 288

[Close]

BLAST of Lsi03G008670 vs. NCBI nr
Match: XP_023511751.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449.5 bits (1155), Expect = 2.0e-122
Identity = 233/292 (79.79%), Postives = 244/292 (83.56%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTPGPVDLFATATSLRLTHSLRRRITHHIRLTFALHSFDKQKL 60
           MVGSSGAGPLGFPLFLEPT GP+DLFATATSLRLTHSLRRRITHHI LTFALHSFDK KL
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDK-KL 60

Query: 61  APLVEVSSKVKNAWCSRALHFPGLNFLEV---ILSPTHAACLYFFSGEETGSSLKNERIS 120
           APL+EV SK+K+AWCSRALHFPGLNFLEV   ILS THAACLYFF G +TGSSLKNE  S
Sbjct: 61  APLIEVPSKLKSAWCSRALHFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEGTS 120

Query: 121 HWKTSNRNPQNDQRWTNILLAVNILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSS 180
           HWKTSNRNPQND+RWTNILL VNILA+LAQVASEGKLLLWG+KIN LID+GQLWRLVTSS
Sbjct: 121 HWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDRGQLWRLVTSS 180

Query: 181 FLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240
           FLHANIGHLMVNCYSLNS+GPAVEK+SGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG
Sbjct: 181 FLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASG 240

Query: 241 AIFGL---------------------------------AIGIMSNGIDNWGH 257
           AIFGL                                 AIGIMS GIDNWGH
Sbjct: 241 AIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGH 291

[Close]

BLAST of Lsi03G008670 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 208.8 bits (530), Expect = 5.6e-54
Identity = 124/269 (46.10%), Postives = 160/269 (59.48%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRITHHIRLTFALHSFDKQKLAPLVEVSSKVKNAWCSRALHFPGLN 85
           FATA S+   H     ++ H+RL F L S   +KL    +  +++K A   R   F G N
Sbjct: 24  FATAASVHACH----HVSRHLRLDFHLRS-SLKKLQHFSD-DARMKFARYQRVFVFNGAN 83

Query: 86  FL----EVILSPTHAACLYFFSGEETGSSLKNER-ISHWKTSNRNPQNDQRWTNILLAVN 145
           FL    ++ LS +     +F  GE   +    E   S+ +TS RN  N +RWTN+LLA+N
Sbjct: 84  FLKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAIN 143

Query: 146 ILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAV 205
           ++ Y+AQ+AS+GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNS+GP  
Sbjct: 144 VIMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTA 203

Query: 206 EKVSGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGL------------------ 257
           E + G +RFLAVY  SA+ASS+MSYWF KAPSVGASGAIFGL                  
Sbjct: 204 ESLGGPKRFLAVYLTSAVASSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGG 263

[Close]

BLAST of Lsi03G008670 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-51
Identity = 123/276 (44.57%), Postives = 159/276 (57.61%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRITHHIRLTFALHSFDKQKLAPLVEVSSKVKNAWCSRALHFPGLN 85
           FATA S+   H     ++ H+RL F L S   +KL    +  +++K A   R   F G N
Sbjct: 24  FATAASVHACH----HVSRHLRLDFHLRS-SLKKLQHFSD-DARMKFARYQRVFVFNGAN 83

Query: 86  FL----EVILSPTHAACLYFFSGEETGSSLKNER-ISHWKTSNRNPQNDQRWTNILLAVN 145
           FL    ++ LS +     +F  GE   +    E   S+ +TS RN  N +RWTN+LLA+N
Sbjct: 84  FLKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAIN 143

Query: 146 ILAYLAQVASEGKLLLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAV 205
           ++ Y+AQ+AS+GK+L WGAKIN LI++GQLWRL T+S LHAN  HLM+NCYSLNS+GP  
Sbjct: 144 VIMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTA 203

Query: 206 EKVSGTRRFLAVYFASAIA-------SSSMSYWFCKAPSVGASGAIFGL----------- 257
           E + G +RFLAVY  SA+A        S+MSYWF KAPSVGASGAIFGL           
Sbjct: 204 ESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRH 263

[Close]

BLAST of Lsi03G008670 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 155 LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYF 214
           LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 215 ASAIASSSMSYWFCKAPSVGASGAIFGL 243
              ++ + MS+     P+VG +G  F L
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFAL 303

[Close]

BLAST of Lsi03G008670 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 155 LLWGAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYF 214
           LL+GAKIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 215 ASAIASSSMSYWFCKAPSVGASGAIFGL 243
              ++ + MS+     P+VG +G  F L
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFAL 303

[Close]

BLAST of Lsi03G008670 vs. TAIR 10
Match: AT1G52580.1 (RHOMBOID-like protein 5 )

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-10
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 158 GAKINGLIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSVGPAVEKVSGTRRFLAVYFASA 217
           GA    L+++G+ WRL++  +LH    HLM N  SL  +G  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 218 IASSSMSYWFC------KAPSVGASGAIFGLAIGIMSNGIDNW 255
           +  S +S   C      +  SVGASGA+FGL   ++S  I NW
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNW 193

The following BLAST results are available for this feature:

BLAST of Lsi03G008670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4ICF4	2.8e-50	44.57	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
P54493	3.5e-16	40.94	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
Q695U0	1.7e-10	38.46	Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1	[more]
Q9FFX0	4.9e-10	39.77	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
Q9SSR0	9.2e-09	37.86	RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1	[more]

BLAST of Lsi03G008670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX69	1.7e-122	80.14	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1HJ61	6.4e-122	79.45	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DL86	4.1e-105	70.89	RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A7N2RCU7	8.7e-71	51.01	Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A371EEG9	6.3e-69	52.90	RHOMBOID-like protein 10, chloroplastic OS=Mucuna pruriens OX=157652 GN=RBL10 PE...	[more]

BLAST of Lsi03G008670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888169.1	5.0e-129	82.94	RHOMBOID-like protein 10, chloroplastic isoform X3 [Benincasa hispida]	[more]
XP_038888170.1	7.2e-128	83.39	RHOMBOID-like protein 10, chloroplastic isoform X4 [Benincasa hispida]	[more]
XP_038888167.1	7.2e-128	83.39	RHOMBOID-like protein 10, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038888168.1	8.8e-126	83.04	RHOMBOID-like protein 10, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_023511751.1	2.0e-122	79.79	RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi03G008670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25290.2	5.6e-54	46.10	RHOMBOID-like protein 10	[more]
AT1G25290.1	2.0e-51	44.57	RHOMBOID-like protein 10	[more]
AT5G38510.1	3.4e-11	39.77	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	3.4e-11	39.77	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G52580.1	6.5e-10	37.86	RHOMBOID-like protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 166..262 e-value: 5.1E-26 score: 91.5
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 125..267 e-value: 7.7E-32 score: 112.5
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 129..256
None	No IPR available	PANTHER	PTHR43731:SF14	PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIAL	coord: 116..242
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 116..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G008670.1	Lsi03G008670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity