Lsi03G008640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G008640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Very-long-chain 3-oxoacyl-CoA synthase
Location	chr03: 14552156 .. 14552977 (-)
RNA-Seq Expression	Lsi03G008640
Synteny	Lsi03G008640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTAAACATCACCGATAGCCTCTATTACTGGCTTGTAAACCACCCCAAAATCCTCAATTTCTCATGGTCTCAAGGTGAAACCTTAGGCTCTTCTCCACTTTTCCTCACTCTCACGGTCCTCTCTTACCTCTCTCTCACCTTCCTCCTCTCCAACCTTTCCCTCCCTCTCCTCCCTCCCACCATTCTCAAACGAATCTCCGTCGTCCATAACCTTATCCTCCTCGCTCTCTCCTTCACAATGGCCCTTGGATGCACTCTCTCCACTTTCTCCCACGCGCCTCACCTTCACTACATTCTATGCCTTCCCCCCAAAACCCCTCCACGTGGGCCCCTCTTCTTCTGGGCTTACGTATTCTACCTCTCCAAGATCGTGGAGTTTATTGACACGTTCTTGATCATCTTAAGCGGGTCGATCAAACGGCTGACGTTCCTCCACGTGTACCACCATGCAACGGTGGTGATTATGTGTTACTTATGGCTTCATTCCTCGCAGTCGTTGTTCCCGTTGGTTTTAGTAACGAACTCTTCGGTTCATGTGTTGATGTACACGTATTACTTGTCGTGTGCGCTTGGGGTTAGGCCAAGGTGGAAGAGGATTGTGACGGAGTGTCAGATTGTGCAGTTTCAGTTTAGCTTCGTGGTGTTGGCTTTGATGCTATATTTTCATGTCACACATAAAGGCCCGGGATGTGCTGGTGTTTGGGGATGGTGCTTTAATGTCGTATTTTACTCGTCGCTTCTGGCTTTGTTCTCGGATTTTCATGCTAAGAACTACGGTGCAAATGGAAAGATGACGGTTCCCAAAAAGGTGGCGTGA

mRNA sequence

ATGAGTCTAAACATCACCGATAGCCTCTATTACTGGCTTGTAAACCACCCCAAAATCCTCAATTTCTCATGGTCTCAAGGTGAAACCTTAGGCTCTTCTCCACTTTTCCTCACTCTCACGGTCCTCTCTTACCTCTCTCTCACCTTCCTCCTCTCCAACCTTTCCCTCCCTCTCCTCCCTCCCACCATTCTCAAACGAATCTCCGTCGTCCATAACCTTATCCTCCTCGCTCTCTCCTTCACAATGGCCCTTGGATGCACTCTCTCCACTTTCTCCCACGCGCCTCACCTTCACTACATTCTATGCCTTCCCCCCAAAACCCCTCCACGTGGGCCCCTCTTCTTCTGGGCTTACGTATTCTACCTCTCCAAGATCGTGGAGTTTATTGACACGTTCTTGATCATCTTAAGCGGGTCGATCAAACGGCTGACGTTCCTCCACGTGTACCACCATGCAACGGTGGTGATTATGTGTTACTTATGGCTTCATTCCTCGCAGTCGTTGTTCCCGTTGGTTTTAGTAACGAACTCTTCGGTTCATGTGTTGATGTACACGTATTACTTGTCGTGTGCGCTTGGGGTTAGGCCAAGGTGGAAGAGGATTGTGACGGAGTGTCAGATTGTGCAGTTTCAGTTTAGCTTCGTGGTGTTGGCTTTGATGCTATATTTTCATGTCACACATAAAGGCCCGGGATGTGCTGGTGTTTGGGGATGGTGCTTTAATGTCGTATTTTACTCGTCGCTTCTGGCTTTGTTCTCGGATTTTCATGCTAAGAACTACGGTGCAAATGGAAAGATGACGGTTCCCAAAAAGGTGGCGTGA

Coding sequence (CDS)

ATGAGTCTAAACATCACCGATAGCCTCTATTACTGGCTTGTAAACCACCCCAAAATCCTCAATTTCTCATGGTCTCAAGGTGAAACCTTAGGCTCTTCTCCACTTTTCCTCACTCTCACGGTCCTCTCTTACCTCTCTCTCACCTTCCTCCTCTCCAACCTTTCCCTCCCTCTCCTCCCTCCCACCATTCTCAAACGAATCTCCGTCGTCCATAACCTTATCCTCCTCGCTCTCTCCTTCACAATGGCCCTTGGATGCACTCTCTCCACTTTCTCCCACGCGCCTCACCTTCACTACATTCTATGCCTTCCCCCCAAAACCCCTCCACGTGGGCCCCTCTTCTTCTGGGCTTACGTATTCTACCTCTCCAAGATCGTGGAGTTTATTGACACGTTCTTGATCATCTTAAGCGGGTCGATCAAACGGCTGACGTTCCTCCACGTGTACCACCATGCAACGGTGGTGATTATGTGTTACTTATGGCTTCATTCCTCGCAGTCGTTGTTCCCGTTGGTTTTAGTAACGAACTCTTCGGTTCATGTGTTGATGTACACGTATTACTTGTCGTGTGCGCTTGGGGTTAGGCCAAGGTGGAAGAGGATTGTGACGGAGTGTCAGATTGTGCAGTTTCAGTTTAGCTTCGTGGTGTTGGCTTTGATGCTATATTTTCATGTCACACATAAAGGCCCGGGATGTGCTGGTGTTTGGGGATGGTGCTTTAATGTCGTATTTTACTCGTCGCTTCTGGCTTTGTTCTCGGATTTTCATGCTAAGAACTACGGTGCAAATGGAAAGATGACGGTTCCCAAAAAGGTGGCGTGA

Protein sequence

MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLPPTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCFNVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA

Homology

[Close]

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.2e-21
Identity = 85/281 (30.25%), Postives = 137/281 (48.75%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYL----SLTFLL----- 60
           MS  + +S+ Y+L  HP I+ F WS  ++ GS+  FL  ++  Y+    SL  LL     
Sbjct: 1   MSTALINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRR 60

Query: 61  SNLSLPLLPPTILKRISVVHNLILLALSFTMALGCTLSTFSH-------------APHLH 120
           SN S+P      L  I  +H+L++  LS T+  G  LS  +              A  L 
Sbjct: 61  SNRSVP------LGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQ 120

Query: 121 YILCLPPKTPPRGPLFFWAYVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMC 180
           ++LC P  T P G +FFW+YVFYL++ +    T   +L    +RL    ++ ++ +    
Sbjct: 121 WLLCFPLGTRPSGRVFFWSYVFYLTRFLHMFRTIFAVLRS--RRLAVSQLFCNSVMAFTS 180

Query: 181 YLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGV-RPRWKRIVTECQIVQFQFSFVVL 240
           +LWL  SQS   L +++ + V+ ++Y Y      G+    +   V  CQ+V    + V  
Sbjct: 181 FLWLEFSQSYQILAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSH 240

Query: 241 ALMLYFHVTHKGPGCAGVWGWCFNVVFYSSLLALFSDFHAK 259
           A +L  H+  KG GC G+  W  N V   ++L LF +F+ +
Sbjct: 241 AGVLTMHL-FKG-GCNGIGAWGLNSVLNGAILLLFLNFYVR 271

[Close]

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot
Match: Q86JM5 (Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272012 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 81/266 (30.45%), Postives = 124/266 (46.62%), Query Frame = 0


Query: 20  LNFSWSQGETLGSS----PLFLTLTVLSYLSLTFLLSNLSLPLLPPTILKRISVVHNLIL 79
           +NF +  G T  S     P  ++L ++   S+ FL+ N       P  LK +S++HN IL
Sbjct: 37  VNFKFKFGTTPFSQFQILPSVISLYLVIIFSIKFLMRNRK-----PFSLKYVSILHNAIL 96

Query: 80  LALSFTMALGCTLSTFSH--APHLHYILCLPPKTPPRGPLFFWAYVFYLSKIVEFIDTFL 139
              S  M +G          A    + +C       +GP ++W+Y+FY+SK  E +DT +
Sbjct: 97  CIWSLVMCVGILYEVIKRITAEGPLFTVCETVSGFDKGPAYYWSYIFYISKFYELLDTVI 156

Query: 140 IILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALG 199
           I+L    K L FLHVYHH  VV +C+ +++S  +L   V+  N+ VHV MY +Y     G
Sbjct: 157 IVLKK--KPLIFLHVYHHCIVVWLCWYFMYSGWNLQLWVVFLNTFVHVFMYYFYFQTGRG 216

Query: 200 VRPRWKRIVTECQIVQFQFSFVVLALMLYFHVT----HKGPGCAGVWGWCFNVVFYSSLL 259
               WK+ +T  QI+Q    F+ L +    H      +  P       +    +   S L
Sbjct: 217 KTVWWKKYITMIQIIQ----FICLGIAGLLHSAAINLNSSPCFTHYPAFISAYLINFSFL 276

Query: 260 ALFSDFHAKNYG----ANGKMTVPKK 272
            LFS F  K+Y     ++   T P K
Sbjct: 277 FLFSQFFVKSYSNKPTSSSSTTTPTK 291

[Close]

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot
Match: Q54TC9 (Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=sre1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 80/250 (32.00%), Postives = 124/250 (49.60%), Query Frame = 0


Query: 21  NFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLPPTILKRISVVHNLILLALSF 80
           NF W  G T  SS +F   T + Y+ + F L  + +      +LK  S++HN+ L+ LSF
Sbjct: 17  NFRWESGVTPLSSYVFPFSTSVIYVLVIFALQAI-MKNKKGMVLKGFSIIHNINLIILSF 76

Query: 81  TMALGCTLSTFSH--APHLHYILCLPPKTPPRGPLFFWAYVFYLSKIVEFIDTFLIILSG 140
           +M  G   + +          ++C       +G + FW Y+FYLSK  E +DT  +IL+ 
Sbjct: 77  SMMSGVMYAAYQQYLEQGAFSLVCEQSSQSVQGRIGFWIYIFYLSKYYELVDT--VILAL 136

Query: 141 SIKRLTFLHVYHHATVVIMCYLWLHSSQSLFP-LVLVTNSSVHVLMYTYYLSCALGVRPR 200
             K + FLH++HH  +V + + WLH    +      + NS +HVLMY YYL   LG  P 
Sbjct: 137 KKKPIIFLHIFHHMAMVPVTWQWLHDQWLVGSWWCTLVNSFIHVLMYYYYLQTTLG-NPC 196

Query: 201 W-KRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGC-AGVWGWCFNVVFYSSLLALFSDF 260
           W K+ +T+ QIVQF       A++ Y+ V      C A +     +    S  + LF  F
Sbjct: 197 WFKKYITKAQIVQF---LTGTAMVSYWFVIRDSEKCQAPLSPAIVSNTINSFFIILFGKF 256

Query: 261 HAKNYGANGK 266
           +  +Y +N +
Sbjct: 257 YYDSYKSNSR 259

[Close]

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot
Match: P40319 (Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ELO3 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-19
Identity = 72/226 (31.86%), Postives = 105/226 (46.46%), Query Frame = 0


Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPH--LHYILCLPPKTPPRGPLFFWAY 120
           P   K +  +HNL L ++S  + L           H  L + +C      P+  L    Y
Sbjct: 101 PLKFKLLFEIHNLFLTSISLVLWLLMLEQLVPMVYHNGLFWSICSKEAFAPK--LVTLYY 160

Query: 121 VFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSS 180
           + YL+K VE IDT  ++L    K+L FLH YHH    ++CY  L    S+  +V++ N  
Sbjct: 161 LNYLTKFVELIDTVFLVLRR--KKLLFLHTYHHGATALLCYTQLIGRTSVEWVVILLNLG 220

Query: 181 VHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHK---------- 240
           VHV+MY YY   + G+R  WK+ VT  QI+QF    V +    Y    HK          
Sbjct: 221 VHVIMYWYYFLSSCGIRVWWKQWVTRFQIIQFLIDLVFVYFATYTFYAHKYLDGILPNKG 280

Query: 241 ---GPGCAGVWGWCFNVVFYSSLLALFSDFHAKNYGANGKMTVPKK 272
              G   A  +G+    +  +S L LF  F+ ++Y   GK TV K+
Sbjct: 281 TCYGTQAAAAYGY----LILTSYLLLFISFYIQSYKKGGKKTVKKE 318

[Close]

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot
Match: P25358 (Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ELO2 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-19
Identity = 75/218 (34.40%), Postives = 104/218 (47.71%), Query Frame = 0


Query: 61  PTILKRISVVHNLILLALSFTMALGCT--LSTFSHAPHLHYILC-LPPKTPPRGPLFFWA 120
           P  L  +  +HNL+L +LS T+ L     L        L++ +C +   T P   L+   
Sbjct: 94  PFKLNGLFQLHNLVLTSLSLTLLLLMVEQLVPIIVQHGLYFAICNIGAWTQPLVTLY--- 153

Query: 121 YVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNS 180
           Y+ Y+ K +EFIDTF ++L    K+LTFLH YHH    ++CY  L  + S+  + +  N 
Sbjct: 154 YMNYIVKFIEFIDTFFLVLKH--KKLTFLHTYHHGATALLCYTQLMGTTSISWVPISLNL 213

Query: 181 SVHVLMYTYYLSCALGVRPRWKRIVTECQIVQF-------QFSFVVLALMLYFHVTHKGP 240
            VHV+MY YY   A G+R  WK  VT  QI+QF        F+    A+ LYF +     
Sbjct: 214 GVHVVMYWYYFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQKAVHLYFPILPHCG 273

Query: 241 GCAGVWGWCF-NVVFYSSLLALFSDFHAKNYGANGKMT 268
            C G     F      SS L LF  F+   Y   G  T
Sbjct: 274 DCVGSTTATFAGCAIISSYLVLFISFYINVYKRKGTKT 306

[Close]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL
Match: A0A5D3CNK0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00120 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.8e-147
Identity = 262/273 (95.97%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MSL ITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNLSLP LP
Sbjct: 1   MSLTITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVISYLSLTFLLSNLSLPPLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLP KTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGTGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYGANGKMT PKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL
Match: A0A1S3BMM0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103491306 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.8e-147
Identity = 262/273 (95.97%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MSL ITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNLSLP LP
Sbjct: 1   MSLTITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVISYLSLTFLLSNLSLPPLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLP KTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGTGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYGANGKMT PKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL
Match: A0A0A0KHS0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_6G411310 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.3e-146
Identity = 260/273 (95.24%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MSL ITD LYYWLVNHPKILNFSWSQGETLGSSPLFLT+TV++YLSLTFLLSNLSLPLLP
Sbjct: 1   MSLTITDGLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVIAYLSLTFLLSNLSLPLLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLP KTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKI+EFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKILEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKG GCAGV+GWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVYGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYGANGKMT PKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL
Match: A0A6J1HGE1 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC111463845 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 247/273 (90.48%), Postives = 262/273 (95.97%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MS+ I+D+L+YWLVNHP IL+FSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNL+LP L 
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           P +LKRI+VVHNL+LL LSFTMALGCTL+TFSHAPHLHYILCLPPKTP +GPLFFWAYVF
Sbjct: 61  PAVLKRITVVHNLVLLVLSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYG NGK T PKK+A
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGK-TAPKKLA 272

[Close]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL
Match: A0A6J1HRB0 (Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC111467063 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 245/273 (89.74%), Postives = 262/273 (95.97%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MS+ I+D+L+YWLVNHP IL+FSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNL+LP L 
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           P +LK+I++VHNL+LLALSFTMALGCTL+TFSHAPHLHYILCLP KTP +GPLFFWAYVF
Sbjct: 61  PAVLKQITIVHNLVLLALSFTMALGCTLATFSHAPHLHYILCLPQKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYG NGK T PKK+A
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGK-TAPKKLA 272

[Close]

BLAST of Lsi03G008640 vs. NCBI nr
Match: XP_038886960.1 (elongation of fatty acids protein 3-like [Benincasa hispida])

HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149
Identity = 266/273 (97.44%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           M+LNI DS+YYWLVNHPKI+NFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP
Sbjct: 1   MNLNIIDSIYYWLVNHPKIVNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRIS VHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISAVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYG NGKMTVPKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGTNGKMTVPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. NCBI nr
Match: XP_008449414.1 (PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo] >TYK13401.1 elongation of fatty acids protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 262/273 (95.97%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MSL ITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNLSLP LP
Sbjct: 1   MSLTITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVISYLSLTFLLSNLSLPPLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLP KTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGTGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYGANGKMT PKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. NCBI nr
Match: XP_004140230.2 (elongation of fatty acids protein 3-like [Cucumis sativus] >KGN47927.1 hypothetical protein Csa_003602 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145
Identity = 260/273 (95.24%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MSL ITD LYYWLVNHPKILNFSWSQGETLGSSPLFLT+TV++YLSLTFLLSNLSLPLLP
Sbjct: 1   MSLTITDGLYYWLVNHPKILNFSWSQGETLGSSPLFLTVTVIAYLSLTFLLSNLSLPLLP 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLP KTPPRGPLFFWAY+F
Sbjct: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPLKTPPRGPLFFWAYIF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKI+EFIDTFLIILSGS KRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKILEFIDTFLIILSGSTKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALG+RPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKG GCAGV+GWCF
Sbjct: 181 VLMYTYYLSCALGIRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVYGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYGANGKMT PKKVA
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGANGKMTAPKKVA 273

[Close]

BLAST of Lsi03G008640 vs. NCBI nr
Match: KAG6571719.1 (putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011444.1 putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.8 bits (1296), Expect = 9.1e-139
Identity = 248/273 (90.84%), Postives = 263/273 (96.34%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MS+ I+D+L+YWLVNHP IL+FSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNL+LP L 
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           P +LKRI+VVHNL+LLALSFTMALGCTL+TFSHAPHLHYILCLPPKTP +GPLFFWAYVF
Sbjct: 61  PAVLKRITVVHNLVLLALSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYG NGK T PKK+A
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGK-TAPKKLA 272

[Close]

BLAST of Lsi03G008640 vs. NCBI nr
Match: XP_022963551.1 (elongation of fatty acids protein sre1-like [Cucurbita moschata])

HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138
Identity = 247/273 (90.48%), Postives = 262/273 (95.97%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLP 60
           MS+ I+D+L+YWLVNHP IL+FSWSQGETLGSSPLFLT+TV+SYLSLTFLLSNL+LP L 
Sbjct: 1   MSMQISDTLHYWLVNHPNILHFSWSQGETLGSSPLFLTITVVSYLSLTFLLSNLTLPHLR 60

Query: 61  PTILKRISVVHNLILLALSFTMALGCTLSTFSHAPHLHYILCLPPKTPPRGPLFFWAYVF 120
           P +LKRI+VVHNL+LL LSFTMALGCTL+TFSHAPHLHYILCLPPKTP +GPLFFWAYVF
Sbjct: 61  PAVLKRITVVHNLVLLVLSFTMALGCTLATFSHAPHLHYILCLPPKTPAQGPLFFWAYVF 120

Query: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180
           YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH
Sbjct: 121 YLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSSVH 180

Query: 181 VLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGVWGWCF 240
           VLMYTYYLSCALGVRPRWKR+VTECQIVQFQFSFVVLALMLYFHVTHKG GCAGVWGWCF
Sbjct: 181 VLMYTYYLSCALGVRPRWKRLVTECQIVQFQFSFVVLALMLYFHVTHKGSGCAGVWGWCF 240

Query: 241 NVVFYSSLLALFSDFHAKNYGANGKMTVPKKVA 274
           NVVFYSSLLALFSDFHAKNYG NGK T PKK+A
Sbjct: 241 NVVFYSSLLALFSDFHAKNYGGNGK-TAPKKLA 272

[Close]

BLAST of Lsi03G008640 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 308.5 bits (789), Expect = 5.2e-84
Identity = 164/265 (61.89%), Postives = 197/265 (74.34%), Query Frame = 0


Query: 4   NITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNL--SLPLLPP 63
           +I  SL YWLVNHP I NF+W +GETLGS+  F+++ V  YLS TFLL +   SLP L P
Sbjct: 3   SIYSSLTYWLVNHPYISNFTWIEGETLGSTVFFVSVVVSVYLSATFLLRSAIDSLPSLSP 62

Query: 64  TILKRISVVHNLILLALSFTMALGCTLS-TFSHA---PHLHYI--LCLPPKTPPRGPLFF 123
            ILK I+ VH+LIL  LS  MA+GCTLS T SHA   P   ++  +C P    P GPLFF
Sbjct: 63  RILKPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMARFLHAICFPVDVKPNGPLFF 122

Query: 124 WAYVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVT 183
           WA VFYLSKI+EF DT LIIL  SI+RL+FLHVYHHATVV+MCYLWL + QS+FP+ LVT
Sbjct: 123 WAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPIALVT 182

Query: 184 NSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGCAGV 243
           NS+VHV+MY YY  CA+G RP+WKR+VT+CQIVQF FSF +   ML  H+   G GC G+
Sbjct: 183 NSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHLF--GSGCTGI 242

Query: 244 WGWCFNVVFYSSLLALFSDFHAKNY 261
           WGWCFN  F +SLLALFS+FH+KNY
Sbjct: 243 WGWCFNAAFNASLLALFSNFHSKNY 265

[Close]

BLAST of Lsi03G008640 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 278.1 bits (710), Expect = 7.6e-75
Identity = 152/263 (57.79%), Postives = 190/263 (72.24%), Query Frame = 0


Query: 4   NITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNL--SLPLLPP 63
           ++  +L YWLV+HP I NF+W++GETLGS+  F+ + V  YLS TFLL     SLP L P
Sbjct: 3   SVYSTLTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLGP 62

Query: 64  TILKRISVVHNLILLALSFTMALGCTLSTFSHA---PHLHYILCLPPKTPPRGPLFFWAY 123
            ILK I+ VH+LIL  LS TMA+GCTLS  S +     L   +C P    P+GPLFFWA 
Sbjct: 63  RILKPITAVHSLILFLLSLTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFWAQ 122

Query: 124 VFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLVLVTNSS 183
           VFYLSKI+EF+DT LIIL+ SI+RL+FLHVYHHATVVI+CYLWL + QS+FP+ LV NS+
Sbjct: 123 VFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVGLVLNST 182

Query: 184 VHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSF-VVLALMLYFHVTHKGPGCAGVWG 243
           VHV+MY YY  CA+G RP+WK++VT  Q+VQF F   +  A ML  H  + G GCAG+W 
Sbjct: 183 VHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEH--YFGSGCAGIWT 242

Query: 244 WCFNVVFYSSLLALFSDFHAKNY 261
             FN VF +SLLALF +FH+KNY
Sbjct: 243 VYFNGVFTASLLALFYNFHSKNY 263

[Close]

BLAST of Lsi03G008640 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-22
Identity = 85/281 (30.25%), Postives = 137/281 (48.75%), Query Frame = 0


Query: 1   MSLNITDSLYYWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYL----SLTFLL----- 60
           MS  + +S+ Y+L  HP I+ F WS  ++ GS+  FL  ++  Y+    SL  LL     
Sbjct: 1   MSTALINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRR 60

Query: 61  SNLSLPLLPPTILKRISVVHNLILLALSFTMALGCTLSTFSH-------------APHLH 120
           SN S+P      L  I  +H+L++  LS T+  G  LS  +              A  L 
Sbjct: 61  SNRSVP------LGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQ 120

Query: 121 YILCLPPKTPPRGPLFFWAYVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMC 180
           ++LC P  T P G +FFW+YVFYL++ +    T   +L    +RL    ++ ++ +    
Sbjct: 121 WLLCFPLGTRPSGRVFFWSYVFYLTRFLHMFRTIFAVLRS--RRLAVSQLFCNSVMAFTS 180

Query: 181 YLWLHSSQSLFPLVLVTNSSVHVLMYTYYLSCALGV-RPRWKRIVTECQIVQFQFSFVVL 240
           +LWL  SQS   L +++ + V+ ++Y Y      G+    +   V  CQ+V    + V  
Sbjct: 181 FLWLEFSQSYQILAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSH 240

Query: 241 ALMLYFHVTHKGPGCAGVWGWCFNVVFYSSLLALFSDFHAK 259
           A +L  H+  KG GC G+  W  N V   ++L LF +F+ +
Sbjct: 241 AGVLTMHL-FKG-GCNGIGAWGLNSVLNGAILLLFLNFYVR 271

[Close]

BLAST of Lsi03G008640 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-19
Identity = 72/266 (27.07%), Postives = 123/266 (46.24%), Query Frame = 0


Query: 11  YWLVNHPKILNFSWSQGETLGSSPLFLTLTVLSYLSLTFLLSNLSLPLLPPTILKR---- 70
           Y+L  HP I+NF WS  ++  S+  FL   V SY+     L  L L  L  +  +R    
Sbjct: 6   YYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRRRGFSL 65

Query: 71  --ISVVHNLILLALSFTMALGCTLSTF------------SHAPHLHYILCLPPKTPPRGP 130
             I  +H+L +  +S  + +G  LS              +    L + LC P  T   G 
Sbjct: 66  GPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRASGR 125

Query: 131 LFFWAYVFYLSKIVEFIDTFLIILSGSIKRLTFLHVYHHATVVIMCYLWLHSSQSLFPLV 190
           +FFW+Y FYLS+ +    TF  ++    ++L+F  + + ++++ + +LWL  SQS   + 
Sbjct: 126 VFFWSYAFYLSRFLHLFRTFFSVIRR--RKLSFFQLINQSSLLCISFLWLEYSQSFQVVA 185

Query: 191 LVTNSSVHVLMYTYYLSCALGVRPRWKRIVTECQIVQFQFSFVVLALMLYFHVTHKGPGC 250
           ++  +  + ++Y Y     +G+R      V  CQ +      V    +L  H+  +G GC
Sbjct: 186 ILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRG-GC 245

Query: 251 AGVWGWCFNVVFYSSLLALFSDFHAK 259
            G+  W FN V  + +  L+  F+ K
Sbjct: 246 NGIGAWLFNSVLNAVITLLYLKFYCK 268

The following BLAST results are available for this feature:

BLAST of Lsi03G008640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYY4	6.2e-21	30.25	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]
Q86JM5	8.0e-21	30.45	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoid...	[more]
Q54TC9	4.0e-20	32.00	Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum OX=44689 GN=s...	[more]
P40319	3.4e-19	31.86	Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204...	[more]
P25358	5.8e-19	34.40	Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204...	[more]

BLAST of Lsi03G008640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNK0	5.8e-147	95.97	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BMM0	5.8e-147	95.97	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis melo OX=3656 GN=LOC103491306 P...	[more]
A0A0A0KHS0	8.3e-146	95.24	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucumis sativus OX=3659 GN=Csa_6G41131...	[more]
A0A6J1HGE1	1.3e-138	90.48	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1HRB0	1.4e-137	89.74	Very-long-chain 3-oxoacyl-CoA synthase OS=Cucurbita maxima OX=3661 GN=LOC1114670...	[more]

BLAST of Lsi03G008640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886960.1	1.2e-149	97.44	elongation of fatty acids protein 3-like [Benincasa hispida]	[more]
XP_008449414.1	1.2e-146	95.97	PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo] >TYK13401.1 e...	[more]
XP_004140230.2	1.7e-145	95.24	elongation of fatty acids protein 3-like [Cucumis sativus] >KGN47927.1 hypotheti...	[more]
KAG6571719.1	9.1e-139	90.84	putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subs...	[more]
XP_022963551.1	2.7e-138	90.48	elongation of fatty acids protein sre1-like [Cucurbita moschata]	[more]

BLAST of Lsi03G008640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06470.1	5.2e-84	61.89	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	7.6e-75	57.79	GNS1/SUR4 membrane protein family	[more]
AT4G36830.1	4.4e-22	30.25	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	1.6e-19	27.07	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PFAM	PF01151	ELO	coord: 32..263 e-value: 6.4E-51 score: 173.3
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 5..266
None	No IPR available	PANTHER	PTHR11157:SF132	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 5..266
IPR030457	ELO family, conserved site	PROSITE	PS01188	ELO	coord: 143..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G008640.1	Lsi03G008640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034625	fatty acid elongation, monounsaturated fatty acid
biological_process	GO:0034626	fatty acid elongation, polyunsaturated fatty acid
biological_process	GO:0019367	fatty acid elongation, saturated fatty acid
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity
molecular_function	GO:0102756	very-long-chain 3-ketoacyl-CoA synthase activity