Lsi03G008580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G008580
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPAP_fibrillin domain-containing protein
Locationchr03: 14097073 .. 14110146 (+)
RNA-Seq ExpressionLsi03G008580
SyntenyLsi03G008580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCAATCAGACTTGAAGAAGAAGGCTGCCCAGTCTGGTGTGAACACAACGTCGGAACTCGAAGAGTTGCGTTTAGTGTGGAAAGAGACAGAAGATGTCGACTCGTCTTCTGGGCCTACAGAGGTGCTTTGTTTTAATTCTCTTGGCAATAATTTTTTGAAAGATTCTCAGAACACAACTTTTGGTATTCCTCTGAAGACAAATCAATGGTCCTCTGATCACACCTTAATTGCTGCAAGCTCTACAAGTAATAGCACACCATTACTTGATTCCTCGAAACCGTTAGTCTTCCCCTCAAATGAAGTCTCGACCAATGAGCGTCTGCATTTGAATGATCACGTTCTCTCTCACTTACCAGCAATGGTCATTTCGTCTGTTGAAGCTTCTAAAATCCCCTCAATTCCACAGAAGTTCTTACGCCTCTTGAAGCCATTCTCCAAGCACTTCTCTAGGAAGAAGAGACATTTTCAGGCCAAGTGTAACAGAAAACAATCCTAATTTGTTATAAGTTTGTTGTGCCCAAGCTCAAGTCCCTACTTTACCTATGAAGGATAAATGAGCATGCAGCAGAATTTAATTTGATCAATGTTCACTCTAAGATGCTTAATTTTGAGGATTAAACATGCAATTAAAAAAGAAAAACCAAGTTTCAAGAACACTTACCCTTGAAGCTTCAAATTCTCCTTCAATTCTTAATGAAAATCAACACCACTTGGTTGTAGACCACCACAAGAGTCTTCTCTACTATTCTCTAGGCTTAGAATGGATGGTGGGATCCAAATTTGTGGTGAATTTGAGAAGGAATGAAGGTTGGGGAAGAAAAGAGTTATGGAGGATATTTTGCAAAATTAACTATTAATTTCACAAAATTCTTAACCCCAATTAAGCCTAAATAATCTCTATTTATTGAAGAACAACATGCAATCCAATTGCATCAAAATTTGACAACTCAAACTCTCAAATTGTTGGCTTAATGTGAAGCAAACAACTAAGTTACTTGCTTAGTTAGTGGGAAAATCCAAACTTTCAAAAATCAATTTTAAATCCAATTTTTAAATGAATTTCCAAAAATTGAATTTAAAATCAATTTTTAATTTGAATTTAATTTCAAAAATTAATTTTAAAATAAATAATTAAATAAAAAATAATTTAATATTTAATTAATTAAATATAATATTATTTTAATATTAAATAATAAAATAATATTATTTTTCTCACTTTTCTCGATTTTTTCAAAAAGCCGATATGAATCCCTATTCATATAATTAATATTTAAATCATATTTAAATATTATAAATAACTTTATTTGTCCGTTTAATTCGTAATTAAATGTCGATATATCGTATATATTCGACTTTCATTCCTTAAGTCAAGATTGAACTATTCAAACTTACTCACCACACTATCTAAGATTTTAGTCCACTTATGAACTAGTAGAAGGACCTAATGGACCTACAGATCATGAGCTCCAACAATCCGAGATTAACTGGTCAAACTCTTTAACCTAGTTAACCAACATTCGTCAACTAACGGGACACTCCACTAAAGCCCGTAGCTGCACTCTCCTCACTGTAGATATATTTCTATCCACTTGATATAACTATAATAAGTAAGTCGATCCTTCACAGGTTGTCCATAATCACAGCTAGGTCAAAATTACCGTTGTACCCCTGTAATTACATCTTGTTCCTTAAGTCCCATTGATTCTCTAATGAACAATTGGTTTATGATCCTATCACTAAACCGAGTCCCTCTCAGGCCAATGAGAGGGTGAGGCCCCTTGTTCAAAACCCGGAATTAGTACTTAAGGGAACAACCTATCTACTAACCCTAAGTCGGGTAGGAGTGAATTCCTTCTCGCAAAACTATGTCCCCAACTATCTACTTCGTCTTACCCTTGAAATGGGAGGCTTATTGAGTCGGCACACTCGGGCCACTCTTACCCATGCAGATCTAAGGATAATCCCGAATAAACAGAAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCTAGTTGAAATAGTCAGTATTTAACAGTAAACGGCGTTATAAAGTAATAGTGACTATTTCGTAGTCCGGTCTTATGCAAACTCATTGCATAGAATGCCTTCACTCACATGTCTTCACATGAATGATTTAGGATCACATCATTTGTATCAAATACAAAGTGGGCCACATTCAATAGTGTCTCCAAGATAAGGTACCCAGCCTTATCCTTATACTATAGACCGTTTTGGCTATTTATTCGAACTTGATCCATTTTTATGTCATTACATAAAGTTCAAGTTTTCATACTAAAGCCATGGATTCTTAGTTTATTGGATTTAGAGTTATATTAACAACAATTCACTTTATTCAATAACAAGTTTACTGAATAACATCGATAACAACTTTATTGATAAATAGAATACACATTAATGTTTACAAACTACGAGTTTTAGGACATAAAACCCAACAACCTAAAAGGTCAGTCACTCTTTCTCTACTACCTCAGCAATTTAAACACTCTGATTTCACCATTCCTAATTCGAAGATTCATTTCTTGAGAGGTACACCATGCTACCCTTCGGATTCTTCTCAAAAAAGGAAGATTGAATCAGATTTTGATTCCCCTATCAGTGTAAGCAGTGAGGAATCAGATGTTTTTGAGAATGGCGTGGATTATGAGGAACCAGGGCAAGAGAACAATTTTGAAGCTGACCTTAATGCTCTGTTTCAGAATATAGTTGATCTAAAGGAAAATGAGAGAGGAGCTTCTTGTTTTTCTACATTGCATCCATCAGAAATCCCTGCCCATCTAAAGTCCATTGTTGAAGATTGTGGATTAACGTTCCTCCCCTCAGCATTAAAACTTATCTGTTTTAATTGGCCAGCAGTGCAAATATGAAAATTGTATCATGGAACACGAGAGGTCTCAAGGATGTGGCTAAACGATTGACTCTAAGACGATTTCTTAAGAAGCATAACCCGAACATAGTTCTTATTCAAGAATCTAAGAAAGAGGAGTTCGAATTAGAATTCATTAAATCTTTGTGGTGCTCTAAAGATATAGGATGGGAATTTGTGGAATCCTATGGTAAATCAGGAGGTATCTTGACAATGTGGGGTTTGTCCAAGCTTTCGGTTATTGAAACTCTCAAAGGAGGCTATTCTTTATCTGTTAAATGCACTACATTGTGCAAAACAACCTGTTGGGTAACAAATGTTTATGGCCCAAATGATTATAAAAAAAGGAGGTTTGTTTGGCCAGAGTTAACCTCCCTTTCAGATTATTGTCTCGAAGCATGGTGTATTGGAGGGGATTTTAACATTACTCGTTGGGCACATGAATGTTTTCCCGCTGGAAGAGTCACAAAAGGAATGCGAAAGTTCAATAGCTTTATTGATTCTGCTAATCTATTGGAAGTTCCTCTATCTAATGGAAGGTTTACTTGGTCTAGAGATGGAATCTCAGCTTCTCGGTCTTTGCTTGATCGTTTTTTTGTCACAAAAGATTGGGATGAAGCATTTGAGAATACAAGAGTCTCTCGACAAGCCCGTACAATCTCAGATCATTTCCCTTTATTACTTGAAGCTGGCTCGGTTTGTTGGGGTCCATCAGCATTTTTTTTTTGCAACAGTTGGCTGTCCATTAAGGATTGTACCAGAATCATTGAAAGAGCATGGAACAGAAGCCAAATTAATGGGTGGGCTGGTTTTGTTCTTAGTGCAAAACTCAGATCTTGATAAAAGAACACTGTTAAAGGCTGAATTAATGAGTATATACGGACTGGAGGAAAGAAACATGATCCAAAAGAGTAAGTTGAATTGGCTCAGATTAGGGGATGAAAACTCCAACTTCTTTCATCGATTTCTTGCAGCTAAGAAGAGGAGAAACTTAATCACTGAATTGTTAAATGATCAAAGGGTGCCAACTTCTTTGTTTCGAGAAATTGAAAGCCTTATTTTGGGCTTTTATGCCTCGTTATTTACGAGCCTTCCTGGAACCCGATACATCCCTTTAAACTTTAATTGGTCGTGTCACACCAATTCAGAATCCCAGGCTCATTGCTAGATTTTTAGAGGCTGAAACTCGAGTGGCGTTGAAGGCCCTTGGTAAGAATAAAGCCCTGGGACCTGATGGTTTTACAGTTGAATTTTTATGAAGTTTTGGGATTCGGTAAAAGGGAACTTCCAATCTTTATTTGATGATTTTTATGAAAATGGAAGGCTACATGCCTGTGTTTAGGAGAATTTCATTTGTTTGATTCAAAAGAAAGAGGATGCGGTTCTTGTCAAAGACTTTAGGCCGATCAGCCTTACTACCTTAACCTACAAGGTAGTTGGCAAGGTCCTTGCGGAAAGACTAAAGAAAGTGATGCCTTCAAAGTGCTCTCATTGGAGGAAGACAAATTCTAGATCCTGTTTTGATTGCGAACGAGGTGGTGGAAGATTATCGAGCTAGGAAGAAAAAAGGGTGGATACTCAAATTGGATCTTGAGAAAGCTTTTGATCGTGTTGATTGGGGGGTTTTTAGAAAAGATTATGGTCTGTAAAAAATTTGATTCTTGTTGGATATCATGGATAATGGGCTGTGTAAAGAATCCAAAATTTTCAGTCTTCATCAATGGAAGACCTCGAGGAAGAATAGTGGCTTCAAGAGGTATTGGGCAAGGTGCCCTTTATCGCCCTTCCTTTTCCTTTTAATAAGTGAAGTATTGGGAGCTCTATTAGACAAAATTCATGAGAATGGATTGTTCGAAGGCTTTGTGGTGGGAAAGGAGAAGACTCACGTTTCTATTCTTCAGTTTGTTGATGACACTCTTATCTTTTGTAAGAATGACGATAATATGCTTCTCAAACTAAAACAAACTATTGAATTGTTCGAATGGTGTTCAGGGCAGAAGGTAAATTGGGATAAATTAGCTCTTTGTGGAGTTAATATTGATGAGAATGAGCTGCTAGCCATGGCTGCAAGGTTGAATTGTAAAGCTGAGCACTTACCTCTTCTTTATCTCGGTCTTCCCTAGGTGGTTACCCCAAACAAGTTTCTTTTTGGCAGCCAATGATAGGTAAAATCCATGCAAAACTTGATAAGTGGAGAAAATTTAATCTATCTAGAGGAGGGAGAGCCACATTGTGCAAATCTGTGTTATCCAACCTCCCCACGTATTTTGTCCTTGTTTCTAATGCCTGAAAAAGTCATTTCTATTTTGGAAAGAATCATAAGAAATTTCTTTTGGGAAGGTCATAAGGGTAACAAGATTAATCATTTGGCAAAGTGGGATTGCGTCATACGTTCCCAAATTGGATGTCTTGGCTTTGGGGGTCTAAAAGCAGAATTTGGCTCTTTTAGCCAAATGGGGTTGGCGGTATTTTGAAGAGGAATATTCCCTTTGGTGTCAGGTTGTTAAAAGCATTCATGGTAAAGACTCTTTTAACTAGCATATGGCTGGAAAGTATGTTAATAGTTTGAGAAGCCCATGGGTTAGCATCTCTAGAACTTGGTTGAAGGTGGATGCTTTGGCTGCTTTTAAACTTGGGAACGGCAACATGATAGCTTTTTGGTAAGATCCTTGGGATGGATTGATCCGTTTGAGTAATCGTTATCCAAGATTGTTCAGGATAGCTCTACTCTCAATGGGGTCGGTTGCGGCACATTGGGAAGCTTTATCTTCATCTTGGTCCATTATTTTTCGTTGTTTGCTTAAGGATGATGAAATTATTGAGTTTCAAGAACTGCTTGGACAAATTTCAGCAAGAAGGATCTCTGAGGCTTATGATAGAAGATCTTGGTCTTTAGAGAATTCTGGAAAATTTAAAGTAAAATCCCTATTAGCACATTTGTCCTCCTCTTCTCCTTTAGATAAGCCATTCTATAAGGCACTTTGGAAGACTAAATGCCCGCGGCGAATCAATATCCTTGTGTGGATTATGATGTTTGGCCACCTTAATTGCTCATCAGTATTGCAAAGGAAACTCTCTTCTCATTGTTTATCTCCAACTATCTGCCCATTATGCAATCCGGAGGGAGAAGACTTGCAACATCTATTTTTTACTTGCTCATATTCAGCTTGCTGCTGGTGGAGAATTTTTTCAATCTTTAATGTTGCTTGGGTGTTTGATGTTTGCTTTAGAGAAAATGTTCTACAGATTCTGATAGGCCCATCTTTAAAAGTGGGTCCTCAGTTGATTTGGGCTAACGCGGTTAAGGCACTACTTGCAGAAATTTGGTTTGAAAGAAACCAAAGGGTGTTCCATGACAAACAGCTTGGATGGTCTGATCGCTTTGAAGTAGCTCGTTGAAATGCTTCCTCGTGGTGCACTCTATCCAAACCTTTTGAAGACTATGACATTCAAGATCTATGTTTGAATTGGAAGACTTTTATCTTCCCAACTTAATTTGTTTTTGTGATAGTTATTATATTGTTTTTGCCCCATTATATTCGGGGTGTACTTTAGTTCTAATTGATTGTTTGCCCCTTTGGAATTTTGTTCTTTGCTGGGGAATGATGAGAGTGCTAAGGGGATGTCAACCTAGTTGAGATGTTCGGGTGCACTCACTGATCCATAGTTTTCATGATCTTGTATTGTAATTTGAGCATTAGTCTCATTTCATTGAAGAGACTCGTTTCCTTTTCAAAAAAAAAAAAAAAAATCTGAAGGAAGATTTTGGGCATCCGCATCACGTACTCGATTGGAAGTAGCATTGATTTTCCAAGCCATGAGGTCCAAAATCTTTGGAGCTTTGATACCAGAGCTTGATGTTTGGAAGACAATCTTTACTGAATAATACTTCTGAAAATCTTTTAAAGGTACCAACCGGCTATAGCTTATATACTAAACCGAGTGTACGCCATAAGAATAAAAAGTACAAAGCACCAGATCAGTTACCACTTGGTAATTAAATGTTTACAGCATAAAACAAACATAAAAAGGACTAGTAAACCACATAGCCTGAACAAACTAGAAAACTAATACCATCCTAACAATTAAAAGGACTAGTGACACATCACCTAATTAAGTGGAGACAACAATAGGGGGGAAAAAAAGTTGCAAGAGAGGTAGTTGAGAGATTGTATGACCCTTAGGTAAAATGTTGAATGCCGGCTTAGTCCTTTTAATATTTAAGTTTCTATACGGGTTTAACTGTTGAAATTCCAAGAAGCATTGCAAAAAGGATGTAAAAAAGTGCTTATCCATTTTTCTATACTAGTTAACGAGAGGGATTGGTTTATAGGTCCAACTTTATGTTGATGTTATTGTCTTTTTTGTAGGTCACAGCAAACTTGAATCCTTTAAATTCAAGAAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGCCTGGTAAGTCATCTGGTTTCTTTGACTAATTTACTTAGTTCCATATGTAGATCAAACTATATTTTGTGCTTGCATTTTTCAGACTCTGGGATTCATTTTCTTTAAATAATAGAAATGAGAAGTTACATTACTGGATAGTTTGCATGTCTTTTGTAGTGACTGAAGCTTTTTTACTGGACACCCTGCTTAGCTATCGACATCCTTGGGCCTACTTTTGAACGTGAAAAACCTGCTTAGCTGTTGCAATTGAATATTAAGCTTCTTAGCTGTTCCGAGAGCGCCAGACCTCTCCCTAGAACACTGTTTCCAGTTATACATAATACATGATAATCCCAAAAACCCACCACTAACATACTAATAGGACTGATCACAGCAGAGCTACTGACAACACCAGCCCAAAAGATAAGCTAACATTCGGCCCGCTAGTGGCTAAGCCCACTACCATCAGCCCTTTTCCCTCGTCTAACATATGTATTTCTAATTGGGGTCTAACAGAGGGATGGTGGGGGTTGGGGAGAAACACTATCCGCAAAAATTATTGTAAGAATTAGTGCCCGGAAATGCAAATTTTTTGATATAATTGACTATATCATAATTGGGAGAAATACAATTAGCAAAATTAACGACACTGGGGTAAGTGTCCAAAATTTCTTTTGACCACGCTACAAGAATTTTGAGAAGTACTCTTAATTAAGTTTCAATTTTTACCCTCAAAAGTCATTCCAAACCTGCCATTATTACAATTTAGCAATTGCAATTTTCTTTTATAAAATTATTATTTTAATTTTTAATTGTTATTTTATCTATTTTATTATTAATATTTTTATTGTGAACTACCTTTCATTAAGAAAAAAATGAACAAATACATGGGTATCCAAAAAATCAAGTCCTGAATAGGGAGCCCTACTAAAGAAAAAGGCTCCAGTTGTATAAGATAATTAAAGAAAAATTACAATAGACCTTTGTTATCGAAGCCCCAAAGAGAGACACAAAACCTAACAAGAGACCAAATATCACTTGGATTTCTCCCCAAACCTCTCAAAATTTTTATTATTCTGTTCTCCTCAAAGATCCCACAACAAAGCACACACACCTTAGCAAATGATAAGAAACAACCCTCCTCTCTATAAGGCGGATGGAGGAGGAACTCTTGAATCATTCACTCACATCCCTATGGTGGACTAATCTGAAGCCAAACACCTATAAAATATAGCTCCACACAGGATGCTCAAAATAGGATGCTCAAAATCACATTTCTAGAGGATATGATCTAGGTCTTCTTCTGCTTTTTGACAAACAATACAACAAAATGGTCCAATCAGGGAAGAAAACTTTTTTAAAAGTCAATCAAGAGTGTTAACTCGCTTGTGGATAACCTGCTAGACAAAGAACTTAACCATCTTTGAAATCTCGACATCCCATAGAGCAGAAAAAATAGGATCCCTAGTGGAAGAAGGGTCCATTAACCAAATAATGAAAGAGGTGAAAGAGAAACCCCTAGGGCTCCATAAACACACATCTCTTCTCTAAAAAATAAGAGATTTGTGACATTTGTTTCTTTCCGATTGGACAACAAATTATAGAAACTAAGCAAAAAGTAAAAAGAGCTCCCATACCATACCAGAATTTCAGCCACAACTATTTTTTAAGGACAAATTATATAGACGAGGAAACATAATGCATAGAGGTTTTTCTTCCACCCATTGATCCTCCCGAAAATATGTTTTCTTCTTCTCTCCCACTACACAATGAACCAAGTAAGAGAAATAAGGAAGCTCAAGGAAATATCTTTCCATAGATTCTTGTGTGTGCCTTTAATCCTACCCGACAACCACTCAAAAGAATGAGGTTTGTACGTCCTCGCATTAATCCTATGTGAGAGGGTTTTAGGCTCAAGGAAGTTGGGCATATGGGCTGGTTTTGTAGGATGCGACAGGCCTCCCTCTTGGAAGTAATCTCAAATCTGTTTCTTTTGGGAACCCAGTGGTAGATAAGGAAGAGATTAGCTTCTTGGAGGAAAAGATTCTTCTCCAAAAGTGGTAGAACAAGTGGCTTGGACTCGGAGTTAAATTGGCTGCTTTACAGATTGTGCAACAATGAGGGGAGAGAGCCATGTGAGAATTAGGGACCTTAAATGCAAACTATGGAATTCTTGAAAAAGCTATCTAGATATTCAAGCTCAGATAATTTGTAAATTGACGTGAAAACAGCTTTTATAAATTAAACTATCAAATCATTTACTCATTTCACAGAAACTAAAGTAAAAACTATGAGAGACTAGATTTTTGGATAGGCTCATCCTTCCGCTAGCTTGACACTACCATAGATACTCATACCAATCTCCTCAGTACCTCAATTGACTTCACATGGCAACCAAACATAAAGCTTTTCTTAAATCACGAAGTAAGGCCTCTAAAAGATGGTGGTCTAGGGATTGGAAATCTGAAAAACAGAAATACAGCTTTATTGTTTAAATGGAATTGGAGATTCCTTAAAGAGCAGGACTCTTTGTGGTTCAAAATTGTTAAAAGCATTCATGGAGTTGATCCACATCTTTGGCACACATCGAGTAAGCTTGGTTTAAGTTTGAGAAGTCCATGGATCAGCATCTCAAGGACTTGGAGTCAATTTGGTCCCGTTGCAAAGTTTAATCTTGGTAATGGGAGGAATATCTTTTTCTGGACAGATTCATGGTGTACTGATATTCCTTTCAAGGTTTGTTTTCCTAAGCTTTATTGTATTGCTTCTTCTCCAAGAAGAGGAGATTGTTGGGACTCAGTTATTGGTTATTGGAACCTTTTATTCCGTAGGCGGCTAAAAGAAGAGGAGATTGTTGAATTTCAGCAGCTGCTGTGTAATATTGAGGGCATCAGAATTTCTTCTCTACTAGATTCAAGATTATGGTCTTTGGATGCTTTAGGAAGATTCTCGGTGAAATCTTTGTCAAGATATTTGATTGCTTCTACTCCTCTTGATAAGGTGATGTACATAGCCCTATGGAAATCAAAAAGTCCCAAAAGAATCAATATTTTGATTTGGATTCTGTTTTATGGTTCTCCCAATTGCTCGTTTATTTTGCAACATAAGCTGCGGAGTAAACATCTTTCACCCTCAATTTGTCCACTGTGTTTAGCCCATGGAGAAGATTTGCAGCATTTGTTATTTGATTGTTGTTTCTCAAGAAATTACTGGTGGAACTTATTTTCCAGTTTCGGTTGGGTGTGGGTTTTTGGGAACAATGTTAGGGACAATATTTCTCATCTTTTGGTTGGTCTTTCTCTATCTTCTATAGCTCATATTTTATGGTCAAATGTAGTTAAAGCTCTAGATTTTGAGATTTGGTTTAAACGTAATCAGAGAGTTTTCCATGATGATTCCAAGAATTGGTAAGACAGATGGGGTTCAGTTCAAACCTTCTTCTTGAAGTTCGCAGTCCAAGCTCTTCGAAGATTACTCTATTCAGAATATTTGCCTCAATTGGAATGTTTTTATTTCTTCTATGTAATCAAGTATTTTAGATCTGTAATATTTAAAATCTTGTTTCATATTGTATATGATGAGAGTGCTAAGTATTTTAGTCTATTTGGTTCATGTCTCTTTGTAATTTGAGCTTTGCTCTTTTTATTATATCAATAAAAAAATTTGTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATGAAGTAAGGCAAAGTACACCTCTGCCTGGTTGTGGCTGAATGGAATCATATTGGCTGAGTGCCAATCATAGAGCATTCCACTAAGGTCTCACAATGAATCTCTCTCCGGTTCTATTTTCATTGATGTAATCCTTTTCATGTCTTGATCAACAGATACCGGTGAAAGCACCTGGAAGAGCCCGCGGTGAACTGGAAATTACATATTTGGATGAAGAGTTGCGGTAAGTAATCGTGCTAAAATGTTCTTACCATTTTTTAGTTTTGTTTTGGTTATAGGTTTTGTGGGGCAAACGGAATAGTAGGGTGTTTAGGGGGATTGAGAGAGATTCTAGAGAGTTATGAACCCTTGTTCGCTTTCATGTTTCCCAATGGGCTTCGGTTTCGAAGATTTTTTTTAATTATTCTATTAGGATGATCTTGTATAGTTGGAGTCCCTTTTGTAAGAGAGTCTCCTTTTTGTGGGCTTGATTTTTTGTATACCCGTGGTGTATTCTTACTTTTTTTTTTTCAATGAAAGGTGGTGTTCTTATTAAAAAAAAAAAAAAAAAAAAAACTGAACTCTAGTACGGAGGATAAGTTTAGAATGATTTTTTGAAAGAGGAAAAGTTATTTTAGCACATTTAGAAACACATCAAAACTTTTGTATGATTGAAACTTGAAAGTTATCTATGCATTTATGATATCTTTATCTGGATCACAACTTACTGAAGTGTATGTGATGGTTACTAGACAATCTAACCAGTTCTGCTTTGTAACAATGGATTAACAAAAATTAAACGTTTAGTTAAAGGCTTACATTGTCATAAAAAGTAGTAAATGAGTTGACTTGAAAGTTTAAATAGAACTAAACATTTTGCATGCTTTCCGTCTTTGAAACATCATTCATTTTCAATCTGCAATATGATGGATCTTTCTTACTATCTTTGTATGTTAAAGAGGCATTGAATCTTTTGAATATGATCTTTTTAACGAATATGTTTTCATTGGTTCTCTTTTAATTCACTGAACATTTGATTGATATTACTTCTATACATTCATTCATCACTGGGCTGTTTATTAAAACTGTTATATCATTGAATTTTGACAGAATATCCAGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATTGATCCTTCTTATCAAGTACCTGTGTAACACTCTAATCTCTTTACTTTACTAGTAATATCCTTCTAAAGCCTCAAGAAATCGCAAAACCAGAGAGTGAATATTATCTTGTAAGTTCATTCTCATAATATCTTCATAAAACTTGTGGCAACCTTTTGTATATTTTCCATATGCCAAATTATACTATGAGAATCTCTCCATCGTGTACCCTTGAAACAATTTGTTCTCTTGTTCCTGTATTCATTCATATTTTAATGTTGCAATTTGTACGAGTGTTTACGAGAA

mRNA sequence

GTTCAATCAGACTTGAAGAAGAAGGCTGCCCAGTCTGGTGTGAACACAACGTCGGAACTCGAAGAGTTGCGTTTAGTGTGGAAAGAGACAGAAGATGTCGACTCGTCTTCTGGGCCTACAGAGGTGCTTTGTTTTAATTCTCTTGGCAATAATTTTTTGAAAGATTCTCAGAACACAACTTTTGGTATTCCTCTGAAGACAAATCAATGGTCCTCTGATCACACCTTAATTGCTGCAAGCTCTACAAGTAATAGCACACCATTACTTGATTCCTCGAAACCGTTAGTCTTCCCCTCAAATGAAGTCTCGACCAATGAGCGTCTGCATTTGAATGATCACATTCATTTCTTGAGAGGTACACCATGCTACCCTTCGGATTCTTCTCAAAAAAGGAAGATTGAATCAGATTTTGATTCCCCTATCAGTGTAAGCAGTGAGGAATCAGATGTTTTTGAGAATGGCGTGGATTATGAGGAACCAGGGCAAGAGAACAATTTTGAAGCTGACCTTAATGCTCTGTTTCAGAATATAGTTGATCTAAAGGAAAATGAGAGAGGAGCTTCTTGTTTTTCTACATTGCATCCATCAGAAATCCCTGCCCATCTAAAGTCCATTGTCACAGCAAACTTGAATCCTTTAAATTCAAGAAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGCCTGATACCGGTGAAAGCACCTGGAAGAGCCCGCGGTGAACTGGAAATTACATATTTGGATGAAGAGTTGCGAATATCCAGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATTGATCCTTCTTATCAAGTACCTGTGTAACACTCTAATCTCTTTACTTTACTAGTAATATCCTTCTAAAGCCTCAAGAAATCGCAAAACCAGAGAGTGAATATTATCTTGTAAGTTCATTCTCATAATATCTTCATAAAACTTGTGGCAACCTTTTGTATATTTTCCATATGCCAAATTATACTATGAGAATCTCTCCATCGTGTACCCTTGAAACAATTTGTTCTCTTGTTCCTGTATTCATTCATATTTTAATGTTGCAATTTGTACGAGTGTTTACGAGAA

Coding sequence (CDS)

GTTCAATCAGACTTGAAGAAGAAGGCTGCCCAGTCTGGTGTGAACACAACGTCGGAACTCGAAGAGTTGCGTTTAGTGTGGAAAGAGACAGAAGATGTCGACTCGTCTTCTGGGCCTACAGAGGTGCTTTGTTTTAATTCTCTTGGCAATAATTTTTTGAAAGATTCTCAGAACACAACTTTTGGTATTCCTCTGAAGACAAATCAATGGTCCTCTGATCACACCTTAATTGCTGCAAGCTCTACAAGTAATAGCACACCATTACTTGATTCCTCGAAACCGTTAGTCTTCCCCTCAAATGAAGTCTCGACCAATGAGCGTCTGCATTTGAATGATCACATTCATTTCTTGAGAGGTACACCATGCTACCCTTCGGATTCTTCTCAAAAAAGGAAGATTGAATCAGATTTTGATTCCCCTATCAGTGTAAGCAGTGAGGAATCAGATGTTTTTGAGAATGGCGTGGATTATGAGGAACCAGGGCAAGAGAACAATTTTGAAGCTGACCTTAATGCTCTGTTTCAGAATATAGTTGATCTAAAGGAAAATGAGAGAGGAGCTTCTTGTTTTTCTACATTGCATCCATCAGAAATCCCTGCCCATCTAAAGTCCATTGTCACAGCAAACTTGAATCCTTTAAATTCAAGAAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGCCTGATACCGGTGAAAGCACCTGGAAGAGCCCGCGGTGAACTGGAAATTACATATTTGGATGAAGAGTTGCGAATATCCAGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATTGATCCTTCTTATCAAGTACCTGTGTAA

Protein sequence

VQSDLKKKAAQSGVNTTSELEELRLVWKETEDVDSSSGPTEVLCFNSLGNNFLKDSQNTTFGIPLKTNQWSSDHTLIAASSTSNSTPLLDSSKPLVFPSNEVSTNERLHLNDHIHFLRGTPCYPSDSSQKRKIESDFDSPISVSSEESDVFENGVDYEEPGQENNFEADLNALFQNIVDLKENERGASCFSTLHPSEIPAHLKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYQVPV
Homology
[Close]
BLAST of Lsi03G008580 vs. ExPASy Swiss-Prot
Match: Q9LU85 (Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP4 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.7e-24
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VT ++ PLNS+KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFIL
Sbjct: 172 VTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFIL 231

Query: 266 KMIDPSYQVPV 277
           KM DP+Y++P+
Sbjct: 232 KMFDPTYRIPL 242

[Close]
BLAST of Lsi03G008580 vs. ExPASy Swiss-Prot
Match: Q6DBN2 (Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP5 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFI 265
           VT +L PLNS+ VAV+   FKILG IPVKAP G ARGELEITY+DEELRISRG    LFI
Sbjct: 163 VTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELRISRGKGNLLFI 222

Query: 266 LKMIDPSYQVPV 277
           LKM DP+Y++P+
Sbjct: 223 LKMFDPTYRIPL 234

[Close]
BLAST of Lsi03G008580 vs. ExPASy Swiss-Prot
Match: Q0JD85 (Fibrillin protein 5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FBN5 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.9e-04
Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0 

Query: 241 GELEITYLDEELRISRGDKGNLFILKMIDPS 272
           G LEITY+DE LRI R DK N+F+L+  DPS
Sbjct: 246 GWLEITYVDESLRIGRDDKANIFVLERADPS 276

[Close]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match: A0A444WZC9 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g101384 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 202 LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGN 261
           L++ VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGN
Sbjct: 142 LQTKVTANLTPLNARKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRVSRGDKGN 201

Query: 262 LFILKMIDPSYQVPV 277
           LFILKM+DPSY+VPV
Sbjct: 202 LFILKMVDPSYRVPV 216

[Close]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match: A0A0A0M3B4 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G665380 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-29
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL
Sbjct: 173 VTADLKPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match: A0A6J1DS61 (probable plastid-lipid-associated protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023791 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-29
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL
Sbjct: 169 VTANLMPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 228

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 229 KMIDPSYRVPV 239

[Close]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match: A0A6P4C536 (probable plastid-lipid-associated protein 4, chloroplastic OS=Arachis duranensis OX=130453 GN=LOC107468834 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-29
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFIL
Sbjct: 178 VTANLTPLNARKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRVSRGDKGNLFIL 237

Query: 266 KMIDPSYQVPV 277
           KM+DPSY+VPV
Sbjct: 238 KMVDPSYRVPV 248

[Close]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match: A0A1S4DUY7 (probable plastid-lipid-associated protein 4, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487254 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.4e-29
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGEL+ITYLDEELRISRGDKGNLFIL
Sbjct: 75  VTADLKPLNSRKVAVQFDTFKILGLIPVKAPGRARGELDITYLDEELRISRGDKGNLFIL 134

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 135 KMIDPSYRVPV 145

[Close]
BLAST of Lsi03G008580 vs. NCBI nr
Match: XP_038887592.1 (probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-29
Identity = 69/71 (97.18%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTANL PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL
Sbjct: 179 VTANLKPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 238

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 239 KMIDPSYRVPV 249

[Close]
BLAST of Lsi03G008580 vs. NCBI nr
Match: RYQ82817.1 (hypothetical protein Ahy_B10g101384 isoform B [Arachis hypogaea])

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-29
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 202 LKSIVTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGN 261
           L++ VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGN
Sbjct: 142 LQTKVTANLTPLNARKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRVSRGDKGN 201

Query: 262 LFILKMIDPSYQVPV 277
           LFILKM+DPSY+VPV
Sbjct: 202 LFILKMVDPSYRVPV 216

[Close]
BLAST of Lsi03G008580 vs. NCBI nr
Match: XP_023532027.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.4 bits (350), Expect = 4.6e-29
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL
Sbjct: 173 VTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lsi03G008580 vs. NCBI nr
Match: XP_015943695.1 (probable plastid-lipid-associated protein 4, chloroplastic [Arachis duranensis])

HSP 1 Score: 138.7 bits (348), Expect = 7.8e-29
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTANL PLN+RKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFIL
Sbjct: 178 VTANLTPLNARKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRVSRGDKGNLFIL 237

Query: 266 KMIDPSYQVPV 277
           KM+DPSY+VPV
Sbjct: 238 KMVDPSYRVPV 248

[Close]
BLAST of Lsi03G008580 vs. NCBI nr
Match: XP_011660249.1 (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN66726.1 hypothetical protein Csa_007176 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 7.8e-29
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VTA+L PLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL
Sbjct: 173 VTADLKPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 232

Query: 266 KMIDPSYQVPV 277
           KMIDPSY+VPV
Sbjct: 233 KMIDPSYRVPV 243

[Close]
BLAST of Lsi03G008580 vs. TAIR 10
Match: AT3G26070.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFIL 265
           VT ++ PLNS+KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFIL
Sbjct: 172 VTGDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFIL 231

Query: 266 KMIDPSYQVPV 277
           KM DP+Y++P+
Sbjct: 232 KMFDPTYRIPL 242

[Close]
BLAST of Lsi03G008580 vs. TAIR 10
Match: AT3G26080.1 (plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-21
Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKILGLIPVKAP-GRARGELEITYLDEELRISRGDKGNLFI 265
           VT +L PLNS+ VAV+   FKILG IPVKAP G ARGELEITY+DEELRISRG    LFI
Sbjct: 163 VTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARGELEITYVDEELRISRGKGNLLFI 222

Query: 266 LKMIDPSYQVPV 277
           LKM DP+Y++P+
Sbjct: 223 LKMFDPTYRIPL 234

[Close]
BLAST of Lsi03G008580 vs. TAIR 10
Match: AT5G19940.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.3e-04
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 206 VTANLNPLNSRKVAVQFDTFKI-LGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFI 265
           +T  L  L+S  V V F+  +I +G +  K    +  +L ITY+DE+LR+  G KG+LF+
Sbjct: 175 LTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFV 234

Query: 266 LK 267
            +
Sbjct: 235 FR 236

The following BLAST results are available for this feature:
BLAST of Lsi03G008580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LU852.7e-2471.83Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thalia... [more]
Q6DBN23.1e-2069.44Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thalia... [more]
Q0JD856.9e-0464.52Fibrillin protein 5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FBN5 PE=... [more]
BLAST of Lsi03G008580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A444WZC91.7e-2989.33Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g101384 PE=3 SV=1[more]
A0A0A0M3B43.8e-2995.77PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6653... [more]
A0A6J1DS613.8e-2995.77probable plastid-lipid-associated protein 4, chloroplastic OS=Momordica charanti... [more]
A0A6P4C5363.8e-2992.96probable plastid-lipid-associated protein 4, chloroplastic OS=Arachis duranensis... [more]
A0A1S4DUY78.4e-2994.37probable plastid-lipid-associated protein 4, chloroplastic isoform X2 OS=Cucumis... [more]
BLAST of Lsi03G008580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887592.12.1e-2997.18probable plastid-lipid-associated protein 4, chloroplastic [Benincasa hispida][more]
RYQ82817.13.5e-2989.33hypothetical protein Ahy_B10g101384 isoform B [Arachis hypogaea][more]
XP_023532027.14.6e-2995.77probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp... [more]
XP_015943695.17.8e-2992.96probable plastid-lipid-associated protein 4, chloroplastic [Arachis duranensis][more]
XP_011660249.17.8e-2995.77probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Cucumis s... [more]
BLAST of Lsi03G008580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G26070.11.9e-2571.83Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT3G26080.12.2e-2169.44plastid-lipid associated protein PAP / fibrillin family protein [more]
AT5G19940.19.3e-0437.10Plastid-lipid associated protein PAP / fibrillin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 206..276
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 231..266
e-value: 4.1E-11
score: 43.2
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 206..276
IPR019825Legume lectin, beta chain, Mn/Ca-binding sitePROSITEPS00307LECTIN_LEGUME_BETAcoord: 218..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G008580.1Lsi03G008580.1mRNA