Lsi03G006280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G006280
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbasic form of pathogenesis-related protein 1-like
Locationchr03: 7805463 .. 7805954 (-)
RNA-Seq ExpressionLsi03G006280
SyntenyLsi03G006280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTTACCAAATTTCTCTCCACATTTTGTTTTGTGGGACTAGCCCTAATACTAGCTCCAATATCTCCCACAGTTGCGAAAAGCAGCCCCCAAGACTTCGTCGATGCCCACAATGCCATTCGTGCTGAGTACGGTGTCGGGCCAGTCACCTGGAACAAAACCTTAGCTAAGTATGCTCAAAATTATGCCAAAACTAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAATTTGGCCGAAGCATTTGAGACGACAACCGCAGAATTGACAGTGAACTATTGGGCTAGTGAGAAGAAATTTTACGACCACAAATCAAACAAGTGCGTCGAGGAAGAGTGCGGCCATTTCCTTCAAGTCGTCTGGAAGGACACGACATCGATTGGTTGCGCGGAAGTTAAGTGCAACAACAACTATATTTTCACTATTTGCAACTATTATCCTCCAGGAGGCTATCCTGACCAACTTCCTTACTAA

mRNA sequence

ATGGCATTTACCAAATTTCTCTCCACATTTTGTTTTGTGGGACTAGCCCTAATACTAGCTCCAATATCTCCCACAGTTGCGAAAAGCAGCCCCCAAGACTTCGTCGATGCCCACAATGCCATTCGTGCTGAGTACGGTGTCGGGCCAGTCACCTGGAACAAAACCTTAGCTAAGTATGCTCAAAATTATGCCAAAACTAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAATTTGGCCGAAGCATTTGAGACGACAACCGCAGAATTGACAGTGAACTATTGGGCTAGTGAGAAGAAATTTTACGACCACAAATCAAACAAGTGCGTCGAGGAAGAGTGCGGCCATTTCCTTCAAGTCGTCTGGAAGGACACGACATCGATTGGTTGCGCGGAAGTTAAGTGCAACAACAACTATATTTTCACTATTTGCAACTATTATCCTCCAGGAGGCTATCCTGACCAACTTCCTTACTAA

Coding sequence (CDS)

ATGGCATTTACCAAATTTCTCTCCACATTTTGTTTTGTGGGACTAGCCCTAATACTAGCTCCAATATCTCCCACAGTTGCGAAAAGCAGCCCCCAAGACTTCGTCGATGCCCACAATGCCATTCGTGCTGAGTACGGTGTCGGGCCAGTCACCTGGAACAAAACCTTAGCTAAGTATGCTCAAAATTATGCCAAAACTAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAATTTGGCCGAAGCATTTGAGACGACAACCGCAGAATTGACAGTGAACTATTGGGCTAGTGAGAAGAAATTTTACGACCACAAATCAAACAAGTGCGTCGAGGAAGAGTGCGGCCATTTCCTTCAAGTCGTCTGGAAGGACACGACATCGATTGGTTGCGCGGAAGTTAAGTGCAACAACAACTATATTTTCACTATTTGCAACTATTATCCTCCAGGAGGCTATCCTGACCAACTTCCTTACTAA

Protein sequence

MAFTKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Homology
BLAST of Lsi03G006280 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-42
Identity = 79/160 (49.38%), Postives = 104/160 (65.00%), Query Frame = 0

Query: 6   FLSTF--CFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 65
           FL+T   CF+  A++   I  + A++SPQD+++ HNA R + GVGP+TW+  LA YAQNY
Sbjct: 3   FLTTIVACFITFAIL---IHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNY 62

Query: 66  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 125
           A  +I  C M HS GPYGENLA AF    A   V  W  EK+FYD+ SN CV   CGH+ 
Sbjct: 63  ANQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYT 122

Query: 126 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           QVVW+++  +GCA V+ NN + F  CNY PPG +  Q P+
Sbjct: 123 QVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

BLAST of Lsi03G006280 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-37
Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = 0

Query: 1   MAFTKF--LSTFCFVGLALILAPISPTV-AKSSPQDFVDAHNAIRAEYGVGPVTWNKTLA 60
           M F  F  L +F  V   L+   IS +  A++S QD++DAHN  RA+ GV P+TW+  +A
Sbjct: 1   MGFVLFSQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVA 60

Query: 61  KYAQNYAKTKIATCEMEHSMGPYGENLAE-AFETTTAELTVNYWASEKKFYDHKSNKCVE 120
            YAQNYA    A C + HS G YGENLAE + +  TA   V  W  EK++YDH SN C +
Sbjct: 61  AYAQNYASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQ 120

Query: 121 -EECGHFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
            + CGH+ QVVW+++  +GCA V+CNN      CNY PPG Y  + PY
Sbjct: 121 GQVCGHYTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

BLAST of Lsi03G006280 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.0e-36
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 0

Query: 12  FVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATC 71
           FV   +       + A++  ++F++AHNA R   GVGP+TW+  LA YAQNYA  +   C
Sbjct: 6   FVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDC 65

Query: 72  EMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVE-EECGHFLQVVWKDT 131
            M HS GPYGENLA AF    A   V  W  EK++YD+ SN C   + CGH+ QVVW+ +
Sbjct: 66  GMIHSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKS 125

Query: 132 TSIGCAEVKCNNNYIFTICNYYPPGGYPDQL 162
             +GCA V+CN+ ++F  CNY PPG Y D +
Sbjct: 126 VRLGCARVRCNSGWVFITCNYDPPGNYIDNV 156

BLAST of Lsi03G006280 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.0e-36
Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 0

Query: 3   FTKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQN 62
           F++  S F    L L L     + A++S QD++DAHN  RA+ GV P+TW+  +A YAQN
Sbjct: 6   FSQMPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQN 65

Query: 63  YAKTKIATCEMEHSMGPYGENLAE-AFETTTAELTVNYWASEKKFYDHKSNKCVE-EECG 122
           Y     A C + HS G YGENLA+ + +  TA   V  W  EK++YDH SN C + + CG
Sbjct: 66  YVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCG 125

Query: 123 HFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           H+ QVVW+++  +GCA VKCNN      CNY PPG    Q PY
Sbjct: 126 HYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

BLAST of Lsi03G006280 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-35
Identity = 76/155 (49.03%), Postives = 98/155 (63.23%), Query Frame = 0

Query: 13  VGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATCE 72
           + LA+  A ++ + A++SPQD+V  HNA RA  GVG V+W+  L  +AQNYA  +I  C+
Sbjct: 10  LALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCK 69

Query: 73  MEHSMGPYGENL--AEAFETTTAELTVNYWASEKKFYDHKSNKCVE-EECGHFLQVVWKD 132
           ++HS GPYGEN+    A     A   VN W SEKK YD+ SN C   + CGH+ QVVW+ 
Sbjct: 70  LQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRA 129

Query: 133 TTSIGCAEVKCNNNY-IFTICNYYPPGGYPDQLPY 164
           +TSIGCA V CNNN  +F  CNY P G    Q PY
Sbjct: 130 STSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

BLAST of Lsi03G006280 vs. ExPASy TrEMBL
Match: A0A5D3C4I8 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001470 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-85
Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 0

Query: 4   TKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 63
           TKF+S FC VGL+LILAPISPT+AKSSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NY
Sbjct: 5   TKFVSAFCVVGLSLILAPISPTIAKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENY 64

Query: 64  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 123
           AKT++ATCEMEHSMGPYGENLAEAFE TTAELTVNYWA+E KFYDHKSNKCVEEECGHFL
Sbjct: 65  AKTRVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEEECGHFL 124

Query: 124 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 125 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. ExPASy TrEMBL
Match: A0A1S3C197 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495335 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-85
Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 0

Query: 4   TKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 63
           TKF+S FC VGL+LILAPISPT+AKSSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NY
Sbjct: 5   TKFVSAFCVVGLSLILAPISPTIAKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENY 64

Query: 64  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 123
           AKT++ATCEMEHSMGPYGENLAEAFE TTAELTVNYWA+E KFYDHKSNKCVEEECGHFL
Sbjct: 65  AKTRVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEEECGHFL 124

Query: 124 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 125 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. ExPASy TrEMBL
Match: A0A0A0K2C5 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070230 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 0

Query: 4   TKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 63
           TKF+  FC VGL LILAPISPT+A S+PQDFVDAHNAIRA+YGVGPVTWNKT+A YA+ Y
Sbjct: 5   TKFVFAFCVVGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKY 64

Query: 64  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 123
           AKTK ATCEMEHSMGPYGENLAEAFE TTAELTVNYWASE KFYDHKSNKCVEEECGHFL
Sbjct: 65  AKTKTATCEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEEECGHFL 124

Query: 124 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           Q+VWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 125 QIVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. ExPASy TrEMBL
Match: A0A6J1D642 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017391 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 126/166 (75.90%), Postives = 138/166 (83.13%), Query Frame = 0

Query: 1   MAFTKFLSTFCFVGLALILA---PISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLA 60
           MA  KF+ T C VGL L L         VAKSSP+DFVDAHN IRAEYGVGPV WN TLA
Sbjct: 1   MAAPKFVWTVCLVGLTLALTLTLTAIVAVAKSSPKDFVDAHNTIRAEYGVGPVAWNTTLA 60

Query: 61  KYAQNYAKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEE 120
            YA+N+AKT++ TCEMEHSMGPYGE+LAEAFE+TTAE TV YWASEK+FYDHK+NKCV +
Sbjct: 61  DYAENFAKTRVDTCEMEHSMGPYGESLAEAFESTTAEATVKYWASEKEFYDHKANKCVND 120

Query: 121 ECGHFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           ECGHFL VVWKDT  IGCAEVKC NNYIFTICNY+PPGGYPDQLPY
Sbjct: 121 ECGHFLNVVWKDTKYIGCAEVKCKNNYIFTICNYFPPGGYPDQLPY 166

BLAST of Lsi03G006280 vs. ExPASy TrEMBL
Match: A0A6J1I8P9 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471019 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.6e-65
Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 0

Query: 8   STFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTK 67
           S   FVGLALILA ISPTVAKS+P++FVDAHNA+RA YGVGPV+WN TLA  A+ +A+T 
Sbjct: 3   SPIWFVGLALILASISPTVAKSTPKEFVDAHNAVRANYGVGPVSWNTTLAADARTFARTM 62

Query: 68  IATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFLQVVW 127
           + TCEM +S GPYGEN+A A+E TTAELTVNYWASEKKFY++KSNKCVEEECGHF QVVW
Sbjct: 63  MGTCEMVYSNGPYGENMALAYEKTTAELTVNYWASEKKFYEYKSNKCVEEECGHFRQVVW 122

Query: 128 KDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           KDTTSIGCAE++C  +YI T+CNYYPPG Y +QLPY
Sbjct: 123 KDTTSIGCAEIECIKDYILTVCNYYPPGNYANQLPY 158

BLAST of Lsi03G006280 vs. NCBI nr
Match: XP_008455070.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031392.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06843.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 0

Query: 4   TKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 63
           TKF+S FC VGL+LILAPISPT+AKSSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NY
Sbjct: 5   TKFVSAFCVVGLSLILAPISPTIAKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENY 64

Query: 64  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 123
           AKT++ATCEMEHSMGPYGENLAEAFE TTAELTVNYWA+E KFYDHKSNKCVEEECGHFL
Sbjct: 65  AKTRVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEEECGHFL 124

Query: 124 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 125 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. NCBI nr
Match: XP_038888848.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888868.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 146/157 (92.99%), Postives = 153/157 (97.45%), Query Frame = 0

Query: 7   LSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKT 66
           L  FC VGL+LILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLA+YAQ YA+T
Sbjct: 8   LFAFCCVGLSLILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAQKYAET 67

Query: 67  KIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFLQVV 126
           +IATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFY+H++NKCVEEECGHFLQVV
Sbjct: 68  RIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYNHQANKCVEEECGHFLQVV 127

Query: 127 WKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           WKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 128 WKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. NCBI nr
Match: XP_004137079.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypothetical protein Csa_017105 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 0

Query: 4   TKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNY 63
           TKF+  FC VGL LILAPISPT+A S+PQDFVDAHNAIRA+YGVGPVTWNKT+A YA+ Y
Sbjct: 5   TKFVFAFCVVGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKY 64

Query: 64  AKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFL 123
           AKTK ATCEMEHSMGPYGENLAEAFE TTAELTVNYWASE KFYDHKSNKCVEEECGHFL
Sbjct: 65  AKTKTATCEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEEECGHFL 124

Query: 124 QVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           Q+VWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY
Sbjct: 125 QIVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

BLAST of Lsi03G006280 vs. NCBI nr
Match: XP_022148832.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-69
Identity = 126/166 (75.90%), Postives = 138/166 (83.13%), Query Frame = 0

Query: 1   MAFTKFLSTFCFVGLALILA---PISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLA 60
           MA  KF+ T C VGL L L         VAKSSP+DFVDAHN IRAEYGVGPV WN TLA
Sbjct: 1   MAAPKFVWTVCLVGLTLALTLTLTAIVAVAKSSPKDFVDAHNTIRAEYGVGPVAWNTTLA 60

Query: 61  KYAQNYAKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEE 120
            YA+N+AKT++ TCEMEHSMGPYGE+LAEAFE+TTAE TV YWASEK+FYDHK+NKCV +
Sbjct: 61  DYAENFAKTRVDTCEMEHSMGPYGESLAEAFESTTAEATVKYWASEKEFYDHKANKCVND 120

Query: 121 ECGHFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           ECGHFL VVWKDT  IGCAEVKC NNYIFTICNY+PPGGYPDQLPY
Sbjct: 121 ECGHFLNVVWKDTKYIGCAEVKCKNNYIFTICNYFPPGGYPDQLPY 166

BLAST of Lsi03G006280 vs. NCBI nr
Match: XP_022972465.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 2.0e-64
Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 0

Query: 8   STFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTK 67
           S   FVGLALILA ISPTVAKS+P++FVDAHNA+RA YGVGPV+WN TLA  A+ +A+T 
Sbjct: 3   SPIWFVGLALILASISPTVAKSTPKEFVDAHNAVRANYGVGPVSWNTTLAADARTFARTM 62

Query: 68  IATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFLQVVW 127
           + TCEM +S GPYGEN+A A+E TTAELTVNYWASEKKFY++KSNKCVEEECGHF QVVW
Sbjct: 63  MGTCEMVYSNGPYGENMALAYEKTTAELTVNYWASEKKFYEYKSNKCVEEECGHFRQVVW 122

Query: 128 KDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           KDTTSIGCAE++C  +YI T+CNYYPPG Y +QLPY
Sbjct: 123 KDTTSIGCAEIECIKDYILTVCNYYPPGNYANQLPY 158

BLAST of Lsi03G006280 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-37
Identity = 69/149 (46.31%), Postives = 96/149 (64.43%), Query Frame = 0

Query: 21  PISPTVAKSS----PQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATCEMEHS 80
           P  P  A ++    PQ+ +  HN  RA  GVGP+ WN+TLA YAQ+YA  +   C M+HS
Sbjct: 28  PAQPPKANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHS 87

Query: 81  MGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKC-VEEECGHFLQVVWKDTTSIGC 140
           +GP+GENLA  + T +  +   YW +EK+ YD+ SN C  +  CGH+ Q+VW+D+  +GC
Sbjct: 88  LGPFGENLAAGWGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGC 147

Query: 141 AEVKC-NNNYIFTICNYYPPGGYPDQLPY 164
           A V+C N+ YI+ IC+Y PPG Y  Q PY
Sbjct: 148 ASVRCKNDEYIWVICSYDPPGNYIGQRPY 176

BLAST of Lsi03G006280 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 4.9e-37
Identity = 67/153 (43.79%), Postives = 96/153 (62.75%), Query Frame = 0

Query: 12  FVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATC 71
           F+ +   L  I    A+ SPQDF+  HN  RAE GVGP+ W++ +A YA+NYA  +   C
Sbjct: 11  FLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDC 70

Query: 72  EMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCV-EEECGHFLQVVWKDT 131
            M+HS G YGEN+A +  + T    V+ W  E+  YD+ SN C  +++CGH+ QVVW+++
Sbjct: 71  AMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNS 130

Query: 132 TSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
             +GCA+V+CNN   F  CNY PPG +  + PY
Sbjct: 131 ERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

BLAST of Lsi03G006280 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 68/148 (45.95%), Postives = 95/148 (64.19%), Query Frame = 0

Query: 16  ALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATCEMEH 75
           AL+ A + P  A+ S QD+V+AHN  R++ GVGP+ W++ LA YA+NYA      C + H
Sbjct: 15  ALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVH 74

Query: 76  SMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECGHFLQVVWKDTTSIGC 135
           S GPYGENLA++    +    VN W +EK  Y++ +N C    CGH+ QVVW+++  +GC
Sbjct: 75  SRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGC 134

Query: 136 AEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           A+V+CNN      CNY PPG Y +Q PY
Sbjct: 135 AKVRCNNGGTIISCNYDPPGNYANQKPY 161

BLAST of Lsi03G006280 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-34
Identity = 70/163 (42.94%), Postives = 98/163 (60.12%), Query Frame = 0

Query: 1   MAFTKFLSTFCFVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYA 60
           M FT + S F  V +AL+ A + P+ A+ SPQD++  HN  R   GVGP+ W++ +A YA
Sbjct: 1   MNFTGY-SRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYA 60

Query: 61  QNYAKTKIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYDHKSNKCVEEECG 120
           ++YA+     C + HS GPYGENLA      +    VN W SEK  Y++ +N C    CG
Sbjct: 61  RSYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCG 120

Query: 121 HFLQVVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           H+ QVVW+ +  +GCA+V+CNN      CNY P G Y ++ PY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

BLAST of Lsi03G006280 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-33
Identity = 63/154 (40.91%), Postives = 95/154 (61.69%), Query Frame = 0

Query: 12  FVGLALILAPISPTVAKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAKYAQNYAKTKIATC 71
           F+ +  I   +  T A+++PQD++++HN  RA+ GV  V W+ TLA YA NY+  + A C
Sbjct: 8   FLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADC 67

Query: 72  EMEHSMGPYGENLAEAFETTTAELT-VNYWASEKKFYDHKSNKCV-EEECGHFLQVVWKD 131
            + HS GPYGENLA+   ++ + ++ V  W  EK +Y +  N C   ++C H+ QVVW+D
Sbjct: 68  NLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRD 127

Query: 132 TTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164
           +  IGCA V+C N + F  CNY  PG +  + PY
Sbjct: 128 SVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P116708.4e-4249.38Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P082994.8e-3746.43Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
Q086979.0e-3645.70Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P070539.0e-3645.40Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P357931.5e-3549.03Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3C4I84.9e-8591.25Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX... [more]
A0A1S3C1974.9e-8591.25basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A0A0K2C51.7e-8289.38SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070230 PE=4 SV... [more]
A0A6J1D6421.3e-6975.90basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673... [more]
A0A6J1I8P99.6e-6574.36basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
Match NameE-valueIdentityDescription
XP_008455070.11.0e-8491.25PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA... [more]
XP_038888848.13.3e-8392.99basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888... [more]
XP_004137079.13.6e-8289.38basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypot... [more]
XP_022148832.12.7e-6975.90basic form of pathogenesis-related protein 1-like [Momordica charantia][more]
XP_022972465.12.0e-6474.36basic form of pathogenesis-related protein 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G19990.13.8e-3746.31pathogenesis-related protein-1-like [more]
AT4G33720.14.9e-3743.79CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.11.1e-3645.95basic pathogenesis-related protein 1 [more]
AT2G14610.11.7e-3442.94pathogenesis-related gene 1 [more]
AT1G50060.15.6e-3340.91CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 119..135
score: 52.69
coord: 96..109
score: 32.11
coord: 50..68
score: 36.73
coord: 146..159
score: 39.62
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 21..163
IPR014044CAP domainSMARTSM00198SCP_3coord: 29..159
e-value: 7.8E-47
score: 171.6
IPR014044CAP domainPFAMPF00188CAPcoord: 35..151
e-value: 1.5E-23
score: 84.0
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 25..163
e-value: 3.3E-41
score: 142.9
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 29..163
NoneNo IPR availablePANTHERPTHR10334:SF469PATHOGENESIS-RELATED PROTEIN 1Bcoord: 21..163
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 31..163
e-value: 2.28502E-73
score: 214.42

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G006280.1Lsi03G006280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space