Lsi03G006170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G006170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	pathogenesis-related protein-1-like
Location	chr03: 7699427 .. 7699859 (+)
RNA-Seq Expression	Lsi03G006170
Synteny	Lsi03G006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGTATGGAGGAACACAAAATCTCTTGGTTGTGCCCAAGTGAAGTGTCAAAACAATTGGGTTTTTCTAATTTGCAACTATTATCCTCCAGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

mRNA sequence

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

Coding sequence (CDS)

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

Protein sequence

MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWANVHIESR

Homology

[Close]

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.1e-27
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++ P++Y+  HNA R QVGV P+ W+  LA YAQNYAN +I  C M HS GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
            +  + A  AV +W DEK+ YDYNSN+CV     C HYTQ+  +W N
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCV--GGVCGHYTQV--VWRN 125

[Close]

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  ++Y+ AHN  R+ VGVEPL W+  +A YAQNYA+   A C + HS G YGENLAE
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAE 89

Query: 62  GY-EVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           G  + MTA  AV +W DEK++YD++SN C      C HYTQ+  +W N
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQV--VWRN 134

[Close]

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.1e-23
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  +N++ AHNA R +VGV P+ W+  LA YAQNYAN +   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
            +  + A  AV +W DEK+ YDYNSN C      C HYTQ+  +W
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQV--VW 122

[Close]

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.0e-23
Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  ++Y+ AHN  R+ VGVEPL W+  +A YAQNY +   A C + HS G YGENLA+
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 62  GY-EVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           G  + MTA  AV +W DEK++YD++SN C      C HYTQ+  +W N
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQV--VWRN 134

[Close]

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-22
Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+   ++YV AHN  RSQ+GV P+ W+  LA YA+NYAN     C++ HSRGPYGENLA+
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               ++   AV+LW +EK +Y+Y++N C   +  C HYTQ+  +W N
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQV--VWRN 127

[Close]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL
Match: A0A5A7SPC2 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001460 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.7e-47
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKSYPKNYV AHNAIR++VGV+PLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 26  LAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYAQNYANTKIATCQMEHSGGPYGENLA 85

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EGYE MTAE AVSLWADEKKHYDYNSN C ND+S+CLHYTQL  +W N
Sbjct: 86  EGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASNCLHYTQL--VWRN 131

[Close]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL
Match: A0A1S3C0S3 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495334 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.7e-47
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKSYPKNYV AHNAIR++VGV+PLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 26  LAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYAQNYANTKIATCQMEHSGGPYGENLA 85

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EGYE MTAE AVSLWADEKKHYDYNSN C ND+S+CLHYTQL  +W N
Sbjct: 86  EGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASNCLHYTQL--VWRN 131

[Close]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL
Match: A0A0A0K7N5 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070232 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKS PKNY+ AHNA+R+ VGVEPLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 32  LAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLA 91

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EG EVMTAETAVSLWADEKKHYDYNSN C ND S+CLHYTQL  +W+N
Sbjct: 92  EGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQL--VWSN 137

[Close]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL
Match: A0A6J1EIR8 (pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111434528 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 6   PKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEV 65
           PK+YV AHNAIR++VGVEPL WN TLA YAQNYA TKIA+C+M HS GPYGENLAEGYE 
Sbjct: 41  PKDYVDAHNAIRAEVGVEPLQWNETLATYAQNYAETKIASCEMVHSGGPYGENLAEGYEE 100

Query: 66  MTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           MTAE AV LW DEKKHYDY+SN CVNDSSHCLHYTQL  +W N
Sbjct: 101 MTAENAVKLWVDEKKHYDYDSNTCVNDSSHCLHYTQL--VWKN 141

[Close]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL
Match: A0A6J1JNW9 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486179 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.9e-37
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           MA S PK++V AHNAIR++VGVEPL WN TLA YAQ YA +KI TC+MEHS GPYGENLA
Sbjct: 26  MANSTPKDFVDAHNAIRAEVGVEPLKWNETLATYAQKYAESKITTCEMEHSGGPYGENLA 85

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
            GYE +TAETAV LWADEKKHY++ SN+C ND +HC+HY QL  +W N
Sbjct: 86  VGYEGITAETAVKLWADEKKHYNHASNSCGNDPTHCVHYRQL--VWKN 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: XP_038888921.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50
Identity = 95/107 (88.79%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           AKSYPKNY+AAHNAIR++VG+EPLHWN TLA YAQNYANTKIATCQMEHS GPYGENLAE
Sbjct: 27  AKSYPKNYIAAHNAIRAEVGIEPLHWNATLAAYAQNYANTKIATCQMEHSGGPYGENLAE 86

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           GYEVMTAETAVSLWADEKKHYDYNSN CVNDSSHCLHYTQL  +W N
Sbjct: 87  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQL--VWRN 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: XP_008455069.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031391.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06842.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 7.6e-47
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKSYPKNYV AHNAIR++VGV+PLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 26  LAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYAQNYANTKIATCQMEHSGGPYGENLA 85

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EGYE MTAE AVSLWADEKKHYDYNSN C ND+S+CLHYTQL  +W N
Sbjct: 86  EGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASNCLHYTQL--VWRN 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: XP_004137080.2 (pathogenesis-related protein 1A [Cucumis sativus] >KGN43826.1 hypothetical protein Csa_017168 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKS PKNY+ AHNA+R+ VGVEPLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 32  LAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLA 91

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EG EVMTAETAVSLWADEKKHYDYNSN C ND S+CLHYTQL  +W+N
Sbjct: 92  EGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQL--VWSN 137

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: KAG6588723.1 (hypothetical protein SDJN03_17288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-41
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 6   PKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEV 65
           PK+YV AHNAIR++VGVEPL WN TLA YAQNYA TKIA+C+M HS GPYGENLAEGYE 
Sbjct: 31  PKDYVDAHNAIRAEVGVEPLQWNETLATYAQNYAETKIASCEMVHSGGPYGENLAEGYEE 90

Query: 66  MTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           MTAE AV LW DEKKHYDY+SN CVNDSSHCLHYTQL  +W N
Sbjct: 91  MTAENAVKLWVDEKKHYDYDSNTCVNDSSHCLHYTQL--VWKN 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: XP_022927709.1 (pathogenesis-related protein 1A-like [Cucurbita moschata])

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-41
Identity = 81/103 (78.64%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 6   PKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEV 65
           PK+YV AHNAIR++VGVEPL WN TLA YAQNYA TKIA+C+M HS GPYGENLAEGYE 
Sbjct: 41  PKDYVDAHNAIRAEVGVEPLQWNETLATYAQNYAETKIASCEMVHSGGPYGENLAEGYEE 100

Query: 66  MTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           MTAE AV LW DEKKHYDY+SN CVNDSSHCLHYTQL  +W N
Sbjct: 101 MTAENAVKLWVDEKKHYDYDSNTCVNDSSHCLHYTQL--VWKN 141

[Close]

BLAST of Lsi03G006170 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-23
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+  P++++A HN  R++VGV PL W+  +A YA+NYAN +   C M+HS G YGEN+A 
Sbjct: 26  AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               MT   AV +W DE+  YDY+SN C  D   C HYTQ+  +W N
Sbjct: 86  SSGSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQV--VWRN 129

[Close]

BLAST of Lsi03G006170 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A+   + ++ AHN  R++VG++PL W+  +A YA +YAN +I  C + HS GP+GEN+A
Sbjct: 21  LAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENIA 80

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVN-DSSHCLHYTQLATIWAN 109
                M+AE A  +W +EK++YDY+SN C + +   CLHYTQ+  +W N
Sbjct: 81  MSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV--VWKN 127

[Close]

BLAST of Lsi03G006170 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++ P++Y+ +HN  R+QVGV  + W+TTLA YA NY+N + A C + HS GPYGENLA+
Sbjct: 23  AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAK 82

Query: 62  G-YEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
           G     +A +AV LW DEK +Y Y  N C      CLHYTQ+  +W
Sbjct: 83  GSSSSFSAISAVKLWVDEKPYYSYAYNNCTG-GKQCLHYTQV--VW 125

[Close]

BLAST of Lsi03G006170 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-23
Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+   ++YV AHN  RSQ+GV P+ W+  LA YA+NYAN     C++ HSRGPYGENLA+
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               ++   AV+LW +EK +Y+Y++N C   +  C HYTQ+  +W N
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQV--VWRN 127

[Close]

BLAST of Lsi03G006170 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-23
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 6   PKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEV 65
           P+  +  HN  R+ VGV P+ WN TLA YAQ+YA+ +   C M+HS GP+GENLA G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 66  MTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
           M+   A   W  EK++YDY+SN C  D   C HYTQ+  +W
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGV-CGHYTQI--VW 139

The following BLAST results are available for this feature:

BLAST of Lsi03G006170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	9.1e-27	53.27	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P08299	1.2e-23	50.00	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q08697	6.1e-23	50.48	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	8.0e-23	48.15	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q9ZNS4	4.0e-22	46.73	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of Lsi03G006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPC2	3.7e-47	83.33	Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C0S3	3.7e-47	83.33	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0K7N5	1.2e-45	82.41	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070232 PE=4 SV...	[more]
A0A6J1EIR8	4.0e-41	78.64	pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1JNW9	5.9e-37	69.44	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Lsi03G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888921.1	2.5e-50	88.79	basic form of pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_008455069.1	7.6e-47	83.33	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA...	[more]
XP_004137080.2	2.5e-45	82.41	pathogenesis-related protein 1A [Cucumis sativus] >KGN43826.1 hypothetical prote...	[more]
KAG6588723.1	8.2e-41	78.64	hypothetical protein SDJN03_17288, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927709.1	8.2e-41	78.64	pathogenesis-related protein 1A-like [Cucurbita moschata]	[more]

BLAST of Lsi03G006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	1.3e-23	46.73	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	1.7e-23	43.12	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	2.2e-23	49.06	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	2.8e-23	46.73	basic pathogenesis-related protein 1	[more]
AT2G19990.1	4.8e-23	47.52	pathogenesis-related protein-1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 4..113 e-value: 2.2E-18 score: 77.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 11..103 e-value: 2.2E-13 score: 51.2
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 1..110 e-value: 3.5E-25 score: 90.9
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 3..103
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 4..110
None	No IPR available	PANTHER	PTHR10334:SF437	BASIC FORM OF PATHOGENESIS-RELATED PROTEIN 1-LIKE	coord: 4..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G006170.1	Lsi03G006170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space