
Lsi03G005450 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACCAGTCAACAGTTTATCATTCTTTTCCATCCTTATATAAACCAGCCAAGCTGCCAAGCTCAGCTTCACAATAACCATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGTATTAAACTATACAAGTGACACGGAAATTAAACTTTCAATTTTGTGTGTATTCACTTTTTGAGTTTTACTTATAATCAGTTTATGAATTATTTAAAAATGTCAATTTGATGGTAGTATATCACATGTAAGCACAGAACTAAAGGAAAATTCAAACAATTTAATTGATTATTTTTAAGACAATTTAAAGTTTAATCATTTTTTTAATTTTGACCATTTTTTGAATTTAAAACAGATTGAATTGAAGAATAATGATACATTTAGTTGGAATATATTACATTTAAACCTACCACTAAATTTAATTCGTGTTCTTGACCATGGAAATATTGAACAACAAAATATCATAATACATATTTTTTATGACGAAAAGAGTACATTTTAAATTATATTTATTTTTGTGAAATAACTCTAATCGAACACAACACACTAATAATAAAATCAAAACAAAAACTTTCAAATATTTTTTCTATAAAAAAGAAAAAATAATTTGTCACGTGACAAGAGCTGCACAAAGATGAATATAACCCAAGATATACCTAAATATTTTTTTTTTATGATACAATAGTATATCATGTAATAAACTATTATATTTACCTTGTTATTAAAATTATTATAGAAATATCATTTGGTCGTGAATTATTATATTTAATCTTTTATTCACATTCTTAATGTCAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAGGACTCTTATGGGTGTGGATTATTGAATAATAAAATAAGGCTGTCTCTGATTAATTATTGCTTATATTATACAATATATAACGTATGTTACATATTATGTATCCAATAGTTTTATAATTTGAGATAAAAATAAAGGAGGTGTTGGCCGGCTTGGTCATAAGAGTATGAATTACTGTTATTT CAAAACCAGTCAACAGTTTATCATTCTTTTCCATCCTTATATAAACCAGCCAAGCTGCCAAGCTCAGCTTCACAATAACCATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAGGACTCTTATGGGTGTGGATTATTGAATAATAAAATAAGGCTGTCTCTGATTAATTATTGCTTATATTATACAATATATAACGTATGTTACATATTATGTATCCAATAGTTTTATAATTTGAGATAAAAATAAAGGAGGTGTTGGCCGGCTTGGTCATAAGAGTATGAATTACTGTTATTT ATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAG MASHKIIFFLFSSLLLLPAISAVEYTVTNNAVGTPGGIRFDNEIGVAYSRQVLVAATDFIWNIFRQHSPADRKNVQKVSLFIVTDYDGVAFASNNEIHVSANYIANYGGDLKREITGVLYHEMTHIWQWNGNPSAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRNGFVAELNRRLKNGYSANYFVQLLGKPVDQLWADYKAAYGN Homology
BLAST of Lsi03G005450 vs. ExPASy Swiss-Prot
Match: C0HJG8 (Basic secretory protease (Fragments) OS=Boswellia serrata OX=613112 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of Lsi03G005450 vs. ExPASy TrEMBL
Match: A0A6J1I4N3 (uncharacterized protein LOC111470952 OS=Cucurbita maxima OX=3661 GN=LOC111470952 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114 Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 0
BLAST of Lsi03G005450 vs. ExPASy TrEMBL
Match: A0A0A0K4M0 (NtPRp27-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 7.0e-114 Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Lsi03G005450 vs. ExPASy TrEMBL
Match: A0A6J1D406 (uncharacterized protein LOC111017379 OS=Momordica charantia OX=3673 GN=LOC111017379 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-113 Identity = 197/226 (87.17%), Postives = 207/226 (91.59%), Query Frame = 0
BLAST of Lsi03G005450 vs. ExPASy TrEMBL
Match: A0A6J1GMQ9 (uncharacterized protein LOC111455381 OS=Cucurbita moschata OX=3662 GN=LOC111455381 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.5e-111 Identity = 196/228 (85.96%), Postives = 211/228 (92.54%), Query Frame = 0
BLAST of Lsi03G005450 vs. ExPASy TrEMBL
Match: A0A5D3C684 (PRp27-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00860 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 8.0e-110 Identity = 191/224 (85.27%), Postives = 207/224 (92.41%), Query Frame = 0
BLAST of Lsi03G005450 vs. NCBI nr
Match: XP_038888317.1 (uncharacterized protein LOC120078164 [Benincasa hispida]) HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117 Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of Lsi03G005450 vs. NCBI nr
Match: XP_022972382.1 (uncharacterized protein LOC111470952 [Cucurbita maxima]) HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-114 Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 0
BLAST of Lsi03G005450 vs. NCBI nr
Match: KAG6571941.1 (hypothetical protein SDJN03_28669, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011629.1 hypothetical protein SDJN02_26535, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113 Identity = 198/226 (87.61%), Postives = 213/226 (94.25%), Query Frame = 0
BLAST of Lsi03G005450 vs. NCBI nr
Match: XP_004136961.1 (uncharacterized protein LOC101221124 [Cucumis sativus] >KGN43894.1 hypothetical protein Csa_017172 [Cucumis sativus]) HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113 Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Lsi03G005450 vs. NCBI nr
Match: XP_023553848.1 (uncharacterized protein LOC111811302 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417.5 bits (1072), Expect = 7.1e-113 Identity = 197/226 (87.17%), Postives = 210/226 (92.92%), Query Frame = 0
BLAST of Lsi03G005450 vs. TAIR 10
Match: AT2G15220.1 (Plant basic secretory protein (BSP) family protein ) HSP 1 Score: 296.2 bits (757), Expect = 2.2e-80 Identity = 137/226 (60.62%), Postives = 175/226 (77.43%), Query Frame = 0
BLAST of Lsi03G005450 vs. TAIR 10
Match: AT2G15130.1 (Plant basic secretory protein (BSP) family protein ) HSP 1 Score: 271.2 bits (692), Expect = 7.7e-73 Identity = 127/226 (56.19%), Postives = 170/226 (75.22%), Query Frame = 0
BLAST of Lsi03G005450 vs. TAIR 10
Match: AT2G15130.2 (Plant basic secretory protein (BSP) family protein ) HSP 1 Score: 201.1 bits (510), Expect = 9.8e-52 Identity = 86/139 (61.87%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of Lsi03G005450 vs. TAIR 10
Match: AT2G15170.1 (Plant basic secretory protein (BSP) family protein ) HSP 1 Score: 72.0 bits (175), Expect = 6.8e-13 Identity = 40/101 (39.60%), Postives = 66/101 (65.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
|