Lsi03G004320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi03G004320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1
Locationchr03: 4898019 .. 4898909 (-)
RNA-Seq ExpressionLsi03G004320
SyntenyLsi03G004320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

mRNA sequence

ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

Coding sequence (CDS)

ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

Protein sequence

MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPPYGTYTNFILNCSCFPFKIYAIVLF
Homology
BLAST of Lsi03G004320 vs. ExPASy TrEMBL
Match: A0A5D3C454 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001750 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 4.6e-73
Identity = 158/281 (56.23%), Postives = 189/281 (67.26%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFP-----FLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSM 60
           M+IN RSFLF L   +FP      LLL+SPAF SS Y E  W+ NC D    KC+     
Sbjct: 1   MDINPRSFLFSLFPHFFPSFLFIILLLSSPAF-SSLYDE--WFLNCQD--SFKCDGFLDK 60

Query: 61  EIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDR 120
             PLWR NGT+ CG + ESM++KCDG R+TI+I G ++ELLG  I+DQIL+IAE GFSD 
Sbjct: 61  GFPLWRYNGTEFCGAYHESMRIKCDGIRSTIKIAGASFELLGLGISDQILIIAEIGFSDG 120

Query: 121 FCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDE-Y 180
           FC  EKNISSSS+ A+IPVS DCG      KP CSG ++ Y     PF N  G N +E Y
Sbjct: 121 FCSPEKNISSSSMYAIIPVSYDCG--LLDKKPTCSGIKYRY----TPFENLTGPNSNERY 180

Query: 181 CWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVA-GHVCSNSNCKDPGGVYVYDL 240
           CWLSAVVPIS+ +LK+VGDD++ VAQHII+EF S R V    VC+N N   PG VYVYD 
Sbjct: 181 CWLSAVVPISRWLLKQVGDDFRLVAQHIIEEFKSGRAVVDSRVCNNCN---PGSVYVYDF 240

Query: 241 QSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPPYG 275
           Q +QTRCCC SS + I+ C SS  T+SP  AD PKTA P G
Sbjct: 241 QLSQTRCCCQSSFDRIKFCASSSFTQSPNYADEPKTALPSG 267

BLAST of Lsi03G004320 vs. ExPASy TrEMBL
Match: A0A1S4DTZ4 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485709 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.7e-72
Identity = 157/279 (56.27%), Postives = 188/279 (67.38%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFP-----FLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSM 60
           M+IN RSFLF L   +FP      LLL+SPAF SS Y E  W+ NC D    KC+     
Sbjct: 1   MDINPRSFLFSLFPHFFPSFLFIILLLSSPAF-SSLYDE--WFLNCQD--SFKCDGFLDK 60

Query: 61  EIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDR 120
             PLWR NGT+ CG + ESM++KCDG R+TI+I G ++ELLG  I+DQIL+IAE GFSD 
Sbjct: 61  GFPLWRYNGTEFCGAYHESMRIKCDGIRSTIKIAGASFELLGLGISDQILIIAEIGFSDG 120

Query: 121 FCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDE-Y 180
           FC  EKNISSSS+ A+IPVS DCG      KP CSG ++ Y     PF N  G N +E Y
Sbjct: 121 FCSPEKNISSSSMYAIIPVSYDCG--LLDKKPTCSGIKYRY----TPFENLTGPNSNERY 180

Query: 181 CWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVA-GHVCSNSNCKDPGGVYVYDL 240
           CWLSAVVPIS+ +LK+VGDD++ VAQHII+EF S R V    VC+N N   PG VYVYD 
Sbjct: 181 CWLSAVVPISRWLLKQVGDDFRLVAQHIIEEFKSGRAVVDSRVCNNCN---PGSVYVYDF 240

Query: 241 QSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           Q +QTRCCC SS + I+ C SS  T+SP  AD PKTA P
Sbjct: 241 QLSQTRCCCQSSFDRIKFCASSSFTQSPNYADEPKTALP 265

BLAST of Lsi03G004320 vs. ExPASy TrEMBL
Match: A0A0A0LQ35 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404850 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 8.9e-61
Identity = 149/275 (54.18%), Postives = 172/275 (62.55%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIP-L 60
           MEIN    LF  L L+   LLLTSPA SSS Y +  W+FNC  + P  C SI     P L
Sbjct: 1   MEINP---LFSPLFLFIT-LLLTSPASSSSVYDQ--WFFNC--QYPFNCGSILHNRYPLL 60

Query: 61  WRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLR 120
           WR NGT+ CGG+ E MK+ CD    TIEIVG NYE+LGFS+NDQIL+IAE G+S RFC  
Sbjct: 61  WRYNGTEFCGGYPEPMKLNCDRSPVTIEIVGANYEILGFSMNDQILIIAEIGYSYRFCSL 120

Query: 121 EKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPD-EYCWLS 180
             N  S+SI A+IPVS DC +PQ+  +P CS  EF Y P           NPD  YCWLS
Sbjct: 121 GNNSLSTSIYAIIPVSYDCPNPQSE-RPTCSRNEFRYMPF----------NPDVNYCWLS 180

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNS-DRKVAGHVCSNSNCKDPGGVYVYDLQSNQ 240
            VVP S   ++EV  D Q+VA H I EF    RKV G VC  S+CK+ GG+Y YDLQ  Q
Sbjct: 181 LVVPWS---VEEVRGDLQKVA-HDISEFKKPGRKVDGQVC--SHCKERGGLYFYDLQLGQ 240

Query: 241 TRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           TRCCC  S  GI  C SS VT+SP  AD PKTA P
Sbjct: 241 TRCCCQFSSIGIASCSSSSVTQSPNYADEPKTALP 250

BLAST of Lsi03G004320 vs. ExPASy TrEMBL
Match: A0A6J1FEM7 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444807 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 9.0e-53
Identity = 128/279 (45.88%), Postives = 166/279 (59.50%), Query Frame = 0

Query: 3   INSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEF-KWYFNCNDRAPSKCESISSMEIPLWR 62
           ++SRSFLF L RL+ PFLLL     +S A+ ++ +W+ NC++     C S+   E PLW 
Sbjct: 1   MDSRSFLFSLSRLFSPFLLLILILTTSRAFPDYGEWFLNCSN--SKGCMSVPDNEPPLWS 60

Query: 63  NNGTDICGGHLESMKMKCD-GDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLRE 122
           N G + CGG+ ++M + CD G R  IEI G +Y+LLG+SI DQIL+IAE   S  FC   
Sbjct: 61  NIGEETCGGNPQTMNVNCDGGGREIIEIEGRSYQLLGYSIKDQILIIAEIDHSAWFC--S 120

Query: 123 KNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAV 182
            +  S SI AMI VS  CGHP T  KP C G+EF++ PL      +K  + D +C LS  
Sbjct: 121 NHAPSISIYAMIHVSYHCGHPHTPDKPTCPGSEFIHIPL------DKRTSFDGFCSLSTE 180

Query: 183 VPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRC 242
           V IS  +L E  +D + VAQHII+E  + RKV  +     NC  PG VY YDLQ +Q +C
Sbjct: 181 VTISPSLLNENHNDLKRVAQHIIEELKATRKVKSN-AECGNCSVPGAVYSYDLQLHQPKC 240

Query: 243 CCPSSVNGIEHCLSSPVTESPKKADAPKTA--PPYGTYT 278
           CC +S    E C  SP   SP+  DAPKTA  PP  T T
Sbjct: 241 CCKTSPKVFEFC-PSPPAGSPQNDDAPKTAAPPPEATKT 267

BLAST of Lsi03G004320 vs. ExPASy TrEMBL
Match: A0A6J1FJF3 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444807 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52
Identity = 125/272 (45.96%), Postives = 163/272 (59.93%), Query Frame = 0

Query: 3   INSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEF-KWYFNCNDRAPSKCESISSMEIPLWR 62
           ++SRSFLF L RL+ PFLLL     +S A+ ++ +W+ NC++     C S+   E PLW 
Sbjct: 1   MDSRSFLFSLSRLFSPFLLLILILTTSRAFPDYGEWFLNCSN--SKGCMSVPDNEPPLWS 60

Query: 63  NNGTDICGGHLESMKMKCD-GDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLRE 122
           N G + CGG+ ++M + CD G R  IEI G +Y+LLG+SI DQIL+IAE   S  FC   
Sbjct: 61  NIGEETCGGNPQTMNVNCDGGGREIIEIEGRSYQLLGYSIKDQILIIAEIDHSAWFC--S 120

Query: 123 KNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAV 182
            +  S SI AMI VS  CGHP T  KP C G+EF++ PL      +K  + D +C LS  
Sbjct: 121 NHAPSISIYAMIHVSYHCGHPHTPDKPTCPGSEFIHIPL------DKRTSFDGFCSLSTE 180

Query: 183 VPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRC 242
           V IS  +L E  +D + VAQHII+E  + RKV  +     NC  PG VY YDLQ +Q +C
Sbjct: 181 VTISPSLLNENHNDLKRVAQHIIEELKATRKVKSN-AECGNCSVPGAVYSYDLQLHQPKC 240

Query: 243 CCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           CC +S    E C  SP   SP+  DAPKTA P
Sbjct: 241 CCKTSPKVFEFC-PSPPAGSPQNDDAPKTAAP 260

BLAST of Lsi03G004320 vs. NCBI nr
Match: TYK06681.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 9.4e-73
Identity = 158/281 (56.23%), Postives = 189/281 (67.26%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFP-----FLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSM 60
           M+IN RSFLF L   +FP      LLL+SPAF SS Y E  W+ NC D    KC+     
Sbjct: 1   MDINPRSFLFSLFPHFFPSFLFIILLLSSPAF-SSLYDE--WFLNCQD--SFKCDGFLDK 60

Query: 61  EIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDR 120
             PLWR NGT+ CG + ESM++KCDG R+TI+I G ++ELLG  I+DQIL+IAE GFSD 
Sbjct: 61  GFPLWRYNGTEFCGAYHESMRIKCDGIRSTIKIAGASFELLGLGISDQILIIAEIGFSDG 120

Query: 121 FCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDE-Y 180
           FC  EKNISSSS+ A+IPVS DCG      KP CSG ++ Y     PF N  G N +E Y
Sbjct: 121 FCSPEKNISSSSMYAIIPVSYDCG--LLDKKPTCSGIKYRY----TPFENLTGPNSNERY 180

Query: 181 CWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVA-GHVCSNSNCKDPGGVYVYDL 240
           CWLSAVVPIS+ +LK+VGDD++ VAQHII+EF S R V    VC+N N   PG VYVYD 
Sbjct: 181 CWLSAVVPISRWLLKQVGDDFRLVAQHIIEEFKSGRAVVDSRVCNNCN---PGSVYVYDF 240

Query: 241 QSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPPYG 275
           Q +QTRCCC SS + I+ C SS  T+SP  AD PKTA P G
Sbjct: 241 QLSQTRCCCQSSFDRIKFCASSSFTQSPNYADEPKTALPSG 267

BLAST of Lsi03G004320 vs. NCBI nr
Match: XP_016899459.1 (PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X1 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 3.6e-72
Identity = 157/279 (56.27%), Postives = 188/279 (67.38%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFP-----FLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSM 60
           M+IN RSFLF L   +FP      LLL+SPAF SS Y E  W+ NC D    KC+     
Sbjct: 1   MDINPRSFLFSLFPHFFPSFLFIILLLSSPAF-SSLYDE--WFLNCQD--SFKCDGFLDK 60

Query: 61  EIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDR 120
             PLWR NGT+ CG + ESM++KCDG R+TI+I G ++ELLG  I+DQIL+IAE GFSD 
Sbjct: 61  GFPLWRYNGTEFCGAYHESMRIKCDGIRSTIKIAGASFELLGLGISDQILIIAEIGFSDG 120

Query: 121 FCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDE-Y 180
           FC  EKNISSSS+ A+IPVS DCG      KP CSG ++ Y     PF N  G N +E Y
Sbjct: 121 FCSPEKNISSSSMYAIIPVSYDCG--LLDKKPTCSGIKYRY----TPFENLTGPNSNERY 180

Query: 181 CWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVA-GHVCSNSNCKDPGGVYVYDL 240
           CWLSAVVPIS+ +LK+VGDD++ VAQHII+EF S R V    VC+N N   PG VYVYD 
Sbjct: 181 CWLSAVVPISRWLLKQVGDDFRLVAQHIIEEFKSGRAVVDSRVCNNCN---PGSVYVYDF 240

Query: 241 QSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           Q +QTRCCC SS + I+ C SS  T+SP  AD PKTA P
Sbjct: 241 QLSQTRCCCQSSFDRIKFCASSSFTQSPNYADEPKTALP 265

BLAST of Lsi03G004320 vs. NCBI nr
Match: XP_011649927.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-60
Identity = 149/275 (54.18%), Postives = 172/275 (62.55%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIP-L 60
           MEIN    LF  L L+   LLLTSPA SSS Y +  W+FNC  + P  C SI     P L
Sbjct: 1   MEINP---LFSPLFLFIT-LLLTSPASSSSVYDQ--WFFNC--QYPFNCGSILHNRYPLL 60

Query: 61  WRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLR 120
           WR NGT+ CGG+ E MK+ CD    TIEIVG NYE+LGFS+NDQIL+IAE G+S RFC  
Sbjct: 61  WRYNGTEFCGGYPEPMKLNCDRSPVTIEIVGANYEILGFSMNDQILIIAEIGYSYRFCSL 120

Query: 121 EKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPD-EYCWLS 180
             N  S+SI A+IPVS DC +PQ+  +P CS  EF Y P           NPD  YCWLS
Sbjct: 121 GNNSLSTSIYAIIPVSYDCPNPQSE-RPTCSRNEFRYMPF----------NPDVNYCWLS 180

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNS-DRKVAGHVCSNSNCKDPGGVYVYDLQSNQ 240
            VVP S   ++EV  D Q+VA H I EF    RKV G VC  S+CK+ GG+Y YDLQ  Q
Sbjct: 181 LVVPWS---VEEVRGDLQKVA-HDISEFKKPGRKVDGQVC--SHCKERGGLYFYDLQLGQ 240

Query: 241 TRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           TRCCC  S  GI  C SS VT+SP  AD PKTA P
Sbjct: 241 TRCCCQFSSIGIASCSSSSVTQSPNYADEPKTALP 250

BLAST of Lsi03G004320 vs. NCBI nr
Match: KAG7015925.1 (hypothetical protein SDJN02_21029, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-57
Identity = 140/299 (46.82%), Postives = 183/299 (61.20%), Query Frame = 0

Query: 3   INSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEF-KWYFNCNDRAPSKCESISSMEIPLWR 62
           ++SRSFLF L RL+ PFLLL     +S A+ ++ +W+ NC++     C S+   E PLW 
Sbjct: 1   MDSRSFLFSLSRLFSPFLLLILILTTSRAFPDYGEWFLNCSN--SKGCMSVPDNEPPLWS 60

Query: 63  NNGTDICGGHLESMKMKCD-GDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLRE 122
           N G + CGG+ ++M + CD G R  IEI G +Y+LLG+SI DQIL+IAE   S  FC   
Sbjct: 61  NIGEETCGGNPQTMNVNCDGGGREIIEIEGRSYQLLGYSIKDQILIIAEIDHSAWFC--S 120

Query: 123 KNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAV 182
            +  S SI AMI VS  CGHP T  KP C G+EF++ PL      +K  + D +C LS  
Sbjct: 121 NHAPSISIYAMIHVSYHCGHPHTPDKPTCPGSEFIHIPL------DKRTSFDGFCSLSTE 180

Query: 183 VPISQRMLKEVGDDWQEVAQ-HIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTR 242
           V IS  +L E  +D + VAQ HII+E  + RKV  +     NC  PG VY YDLQ +Q +
Sbjct: 181 VTISPSLLNENHNDLKRVAQHHIIEELKATRKVKSN-AECGNCSVPGAVYSYDLQLHQPK 240

Query: 243 CCCPSSVNGIEHCLSSPVTESPKKADAPKT-APPYGTYTNFIL--NCSCFPFKIYAIVL 296
           CCC +S    E C  SP   SP+  DAPKT APP GTYTN +L  + SCFPF++Y I+L
Sbjct: 241 CCCKTSPKVFEFC-PSPPAGSPQNDDAPKTAAPPPGTYTNPLLFNSSSCFPFEMYPILL 287

BLAST of Lsi03G004320 vs. NCBI nr
Match: XP_023550331.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.2 bits (557), Expect = 4.9e-53
Identity = 128/281 (45.55%), Postives = 168/281 (59.79%), Query Frame = 0

Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEF-KWYFNCNDRAPSKCESISSMEIPL 60
           ++++SRSFLF L RL+ PFLLL     +S A+ ++ +W+ NC++     C S+   E PL
Sbjct: 29  LQMDSRSFLFSLSRLFSPFLLLILILTTSRAFPDYGEWFLNCSN--SKGCMSVPDNEPPL 88

Query: 61  WRNNGTDICGGHLESMKMKCD-GDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCL 120
           W N G + CGG+ ++M + CD G R  IEI G +Y+LLG+SI DQIL+IAE   S  FC 
Sbjct: 89  WSNIGEETCGGNPQTMNVNCDGGGREIIEIEGRSYQLLGYSIKDQILIIAEIDHSAWFC- 148

Query: 121 REKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLS 180
              +  S SI AMI VS  CGHP T  KP C G+EF++ PL      +K  + D +C LS
Sbjct: 149 -SNHAPSISIYAMIHVSYHCGHPHTPDKPTCPGSEFIHIPL------DKRTSFDGFCSLS 208

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQT 240
             V IS  +L E  +D + VAQHII+E  + RKV  +     NC  PG VY YDLQ +Q 
Sbjct: 209 TEVKISPSLLNENHNDLKRVAQHIIEELKATRKVKSN-AECGNCSVPGAVYSYDLQLHQP 268

Query: 241 RCCCPSSVNGIEHCLSSPVTESPKKADAPKTA--PPYGTYT 278
           +CCC +S    E C  SP   SP+  DAPKTA  PP  T T
Sbjct: 269 KCCCKTSPKVFEFC-PSPPAGSPQNDDAPKTAAPPPEATKT 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C4544.6e-7356.23LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
A0A1S4DTZ41.7e-7256.27LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
A0A0A0LQ358.9e-6154.18Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404... [more]
A0A6J1FEM79.0e-5345.88LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
A0A6J1FJF31.2e-5245.96LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
Match NameE-valueIdentityDescription
TYK06681.19.4e-7356.23LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
XP_016899459.13.6e-7256.27PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-li... [more]
XP_011649927.11.8e-6054.18LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
KAG7015925.11.1e-5746.82hypothetical protein SDJN02_21029, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023550331.14.9e-5345.55LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 isof... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33138:SF11WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 6..268
NoneNo IPR availablePANTHERPTHR33138OS01G0690200 PROTEINcoord: 6..268

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G004320.1Lsi03G004320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0016301 kinase activity